BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035749
         (405 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/404 (53%), Positives = 284/404 (70%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G  PNV+TY TL+NGLC TG+T++A+ L EEM+NGNG FGV  KP+ V
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+G +DK KEL L+MK + I+PDVV Y+S+I G C+      AK LF EM
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV PNVVTF+V++D LCK GKMEEA+ LL+LMIQ G  P+ F YNTL+DGFCL GR+
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++LFVSMES G + +  SY++LINGYCK+  +  A  LY EM+ K I PTV+TYNTL
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF   +V  A+ LF EM+ H +  ++  Y   +DGLCKN ++ EA+ELF  L     
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I+ ++CLIDGLCK+ +++IA ELF+ L    L  +V+TY +MIH LC  G+++ A D
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LFL ME KG AP+ V FNTLM G  +N+E  KVVELL  M E++
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 206/419 (49%), Gaps = 49/419 (11%)

Query: 30  CRTGHT--IVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C++GH     A ++F  +I+      +   P    + T++  + K         L  +M 
Sbjct: 66  CKSGHIKRSEAFSVFNHLID------MQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMS 119

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              + PD +T N +I  +C  N  +    +  EM+ +G  PN VTF+ ++  LC   ++ 
Sbjct: 120 LIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRIS 179

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR--------------------------- 180
           EA+ LL  M+++G RPN   Y TL++G C+TG                            
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 181 --------------VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                         +++ KELF+ M+  G   +V +YS +I+G C     EGA  L++EM
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + +G+ P VVT+N L   L +  ++E A  L   M + G + DT+ Y T IDG C  G I
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A +LF ++     E D  SY+ LI+G CKSGR+  A +L+  +    ++  V+TYN +
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  L  +GK+  A +LF +M+   + P+   +N L+ G  +NN  S+ +EL H ++  +
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 6/230 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++      P VITY+TL+ GL R G    A NLF EM   +        P++
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD------LTPES 448

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++DGLCK   + +A EL   +++ +  P +  +N +I G C A     A+ LF  
Sbjct: 449 CTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR 508

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++PNV+T++V++  LCK+G++E A  L   M + G  PN   +NTLM GFC    
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDE 568

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           + +  EL   M       +  + SI+++   K+++    L L     ++G
Sbjct: 569 MQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/404 (50%), Positives = 286/404 (70%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  GC PN +TY TLI GLC+TG+  +AL L +EM+N   ++GV CKP  +
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK G  D+AKEL  +MK + + PDV++Y+++I GFC A   +++K LF EM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQGVQP++VTFSV++D LCK GK+ EA +LLE+MIQ G+ PN   YN+L+DGFC+ G +
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A+ELF+SM S G + +  SY+ LINGYCK  +++ A++LY+EML  G  P V TY TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +V  A KLF  M+ +GV+A++  Y  F+DGLCKN  + EA+ELF  L+    
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I +YSCLIDGLCK+G+L+ AWELF  L +  L  DVVTYNIMIH  C  G++D A+ 
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  ME  G  PD +A+NTL+ G    N+  +V++LLH+M +++
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 208/362 (57%), Gaps = 6/362 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++KA G  P+VI+YSTLI+G C  G    + +LF+EM++     GV  +PD V
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ----GV--QPDMV 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +ID LCKEG V +AK+LL  M  + I P+++TYNS+I GFC   D N A+ LF+ M
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+ ++++ +++  CK  K++EA  L   M+Q+G  PN   Y TL+ G    G+V
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK+LF  M++ G   N   Y I ++G CKN  +  A+ L++E+ S   K  +  Y+ L
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A++LF+++ + G+  D   Y   I G CK G +  A  LF  +    C
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ L+ G C+  +L+   +L H + +  +  +  +  I++  LC D K  K  D
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVD 608

Query: 362 LF 363
           L 
Sbjct: 609 LL 610



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 14/380 (3%)

Query: 30  CRTGH--TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C+TG+   I A + F+ M+  +        P    +  ++ GL K     +   L  +M+
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHP------IPPISSFNRLLGGLAKINHYSQLFSLYNEMR 118

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              ++PD+ T + +    C  N  +EA      ++ +G  PNVVT++ ++  LC   ++ 
Sbjct: 119 LAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRIS 178

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVF 201
           EA++L   M ++G  PNA  Y TL+ G C TG VN A +L        S   + CK  V 
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +YSI+I+G CK    + A  L+ EM ++G+ P V++Y+TL  G     + +++  LFDEM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              GV  D   +   ID LCK G + EA +L   +       ++ +Y+ LIDG C  G L
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A ELF S+P   L  D ++Y  +I+  C   K+ +A +L+ +M   G +P+   + TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  +  +     +L   M
Sbjct: 419 LKGLFQKGKVGDAKKLFGVM 438



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 8/272 (2%)

Query: 141 CKNGKME--EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
           CK G +   +A    +LM++    P    +N L+ G       ++   L+  M   G   
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           ++F+ SIL N  C    +  AL+  + +L +G  P VVTY TL  GL   H++  A +LF
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------RILKCELDIRSYSCLI 312
             MQ+ G   +   Y T I GLC+ G +  AL+L + +        + C+  + +YS +I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DGLCK GR   A ELF  +    +I DV++Y+ +IH  C  GK D++  LF +M  +GV 
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           PD V F+ L+    +  + ++  +LL  M +R
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/404 (50%), Positives = 278/404 (68%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA LFT+++  GC PN ITY TL+ GLCRTG+  +AL L +EM+N +  +G+  KP  +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IID LCK+   D+A++L  +MK + + P V++Y S+I GFC      EAKRLF EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QGVQPNVVTF+V++D LCK GK+ EA  LLE+MIQ G+ PN   YN+L++GFCL G +
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A+ELFVSM S GC+ +V  Y++LINGYCK  ++E A+ LY+ ML  G +P V TY  L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +V  A KLF  M+ +G+  D + Y  F++GLCKNG + EA+ELF  L+    
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  ++CLIDGLCK+G+L+ AWELF  LP+  L  DVVTYNIMIH  C  G++ KA+ 
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  ME  G  PD + + TL+ G   + +  KVVELLH M +R+
Sbjct: 544 LFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 587



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 200/347 (57%), Gaps = 9/347 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K  G  P VI+Y++LI+G C  G    A  LF EM+N     GV  +P+ V
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ----GV--QPNVV 313

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG V +AK+LL  M  + I P+++TYNS+I GFC   D N A+ LF+ M
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V+ ++V+++  CK  K+EEA +L   M+Q+G RP+   Y  L+ G    G+V
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK+LF  M+  G   +++ Y I +NG CKN  +  A+ L++++ S  IK  +  +N L
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A++LF+++ +  +  D   Y   I   C+ G +V+A  LF+ +    C
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             D  +Y+ LI G  +S +L+   EL H + +  +  DV   NI+ H
Sbjct: 554 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 597



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 184/380 (48%), Gaps = 14/380 (3%)

Query: 30  CRTGHTIV--ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C+TG+     A   F  M+  N        P    +T ++ GL K     +   L  QM+
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPT------PPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              I+PD  T N ++   C  N   E   +   ++ +G  P++VT++ ++  LC   ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVF 201
           +A+ L   M ++G  PNA  Y TLM G C TG ++ A +L        S+  +  K  V 
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           SYSI+I+  CK++  + A  L+ EM  +G+ PTV++Y +L  G     + E A +LF+EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              GV  +   +   ID LCK G ++EA +L   +       ++ +Y+ LI+G C  G L
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A ELF S+P      DV+ Y ++I+  C   K+++A  L+  M   G  PD   +  L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  +  +     +L   M
Sbjct: 424 LTGLFQGGKVGDAKKLFGVM 443



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 6/274 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   G  PN++TY++LI G C  G    A  LF  M +        C+PD 
Sbjct: 329 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG------CEPDV 382

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I+G CK   V++A +L   M      PDV TY +++ G        +AK+LF  
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  ++  + + ++ LCKNG + EA +L   +    ++ +   +N L+DG C  G+
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ELF  +     + +V +Y+I+I+ +C+  ++  A  L+ +M   G  P  +TY T
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           L  G FE  ++E+  +L   M +  V+ D    R
Sbjct: 563 LIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 596



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)

Query: 281 CKNGYIV--EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I   +A + F  +        + S++ L+ GL K       + L++ +    +  
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D  T NI+++ LC   ++ +   +   +  +G  PD V + TL+ G    +  SK   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 399 HRMDE 403
            RM +
Sbjct: 190 TRMQK 194


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/404 (48%), Positives = 283/404 (70%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  GC P+V+TY TLI GLC TG+  +AL L +EM+N    + + CKP+ +
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+DGLCK G  D+AK+L  +MK + + P +++YNS+I GFC A    E+KRL  EM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQG+QP++VTF+V++D LCK GK+ EA +LL +MI+ G+ P+   YN+L++GFC+ G +
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A+ELFVSM S GC+ +V SY++LINGY K  ++E A+ LY+EML  G +P V+TY++L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+F   +V+ A KLF  M+ HG+A +++ Y  F+DGLCKN  + EA++LF  L+    
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I + +CLIDGLCK+G+L+ AWELF  L       +VVTY IMIH  C +G++DKA+ 
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   MEA G  PD + +NTLM G   +N+  +VV+LLHRM +++
Sbjct: 517 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 204/354 (57%), Gaps = 6/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K  G  P++I+Y++LI+G C  G    +  L +EM++         +PD V
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG------LQPDMV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG V +AK+LL  M +  I PD+VTYNS+I GFC   D N A+ LF+ M
Sbjct: 287 TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V++++V+++   K  K+EEA +L   M+ +G RPN   Y++L+ G  L G+V
Sbjct: 347 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK+LF  M++ G   N ++Y I ++G CKN  +  A+ L++E+ S   K  +   N L
Sbjct: 407 DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A++LF+++   G   +   Y   I G C+ G + +A  L + +    C
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             DI +Y+ L+ G  +S +L+   +L H + +  +  D +T +I++  L  D K
Sbjct: 527 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 580



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 185/363 (50%), Gaps = 14/363 (3%)

Query: 30  CRTGHTIV--ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C+TG+     AL+ F  M+           P    +  ++ GL K     +   L  QM+
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTP------TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR 96

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              ++ D  T N ++   C  N   E    F  ++ +G  PN+VT++ ++  LC   ++ 
Sbjct: 97  LSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVF 201
           EA++L   M ++G  P+   Y TL+ G C TG +N A +L       +S   + CK NV 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+++G CK    + A  L+ EM ++G+ P++++YN+L  G     + E + +L DEM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  D   +   ID LCK G ++EA +L   +       D+ +Y+ LI+G C  G L
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A ELF S+P      DV++YN++I+      K+++A  L+ +M   G  P+ + +++L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 382 MLG 384
           + G
Sbjct: 397 LKG 399



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 9/347 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  L  ++   G +P+++T++ LI+ LC+ G  I A  L   MI    E G+V  PD V
Sbjct: 268 ESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI----ESGIV--PDLV 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+G C  G ++ A+EL + M  K   PDV++YN +I G+       EA +L+ EM
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PNV+T+  ++  +   GK+++A +L  +M   G+  N++ Y   +DG C    +
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  ++S   K  + + + LI+G CK  ++E A  L+ ++ ++G +P VVTY  +
Sbjct: 442 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     QV++A  L  +M+ +G   D   Y T + G  ++  + E ++L   +     
Sbjct: 502 IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 561

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             D  + S ++D L K  + +   E  H LPR  +   V  + +M H
Sbjct: 562 SPDAITCSIVVDMLSKDEKYQ---ECLHLLPRFPIQKGVDKHLLMTH 605



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 171/339 (50%), Gaps = 8/339 (2%)

Query: 71  CKEGFVDKAKELLL--QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           CK G V     L     M      P + ++N ++ G       ++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +  T +++++ LC   ++ E       +++ G  PN   YNTL+ G C+  R++ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPTVVTYNTLF 242
           + M+ +GC  +V +Y  LI G C    I  AL L+ EML+         KP V+TYN + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL ++ + + A +LF+EM+  G+     +Y + I G C  G   E+  L   +     +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +++ LID LCK G++  A +L   +    ++ D+VTYN +I   C  G ++ A +L
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F+ M +KG  PD +++N L+ G  +  +  + ++L + M
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 154/300 (51%), Gaps = 6/300 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   G  P+++TY++LI G C  G    A  LF  M +        C+PD 
Sbjct: 302 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG------CEPDV 355

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+G  K   V++A +L  +M      P+V+TY+S+++G   A   ++AK+LF  
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  N  T+ + +D LCKN  + EA +L   +     +      N L+DG C  G+
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ELF  + + G + NV +Y+I+I+G+C+  +++ A  L  +M + G  P ++TYNT
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G +E +++E   +L   M +  V+ D       +D L K+    E L L     I K
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 281 CKNGYIV--EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G +    AL  F  +        + S++ L+ GL K       + L++ +    L +
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D  T NI+++ LC   ++ +    F  +  +G +P+ V +NTL+ G    +  S+   L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 399 HRMDE 403
            RM +
Sbjct: 163 LRMQK 167


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/404 (49%), Positives = 275/404 (68%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA LFT+++  GC PN ITY TL+ GLCRTG+  +AL L +EM+N +  +G+  KP  +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IID LCK+   D+A++L  +MK + + P V++Y S++          EAKRLF EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEM 295

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QGVQPNVVTF+V++D LCK GK+ EA  LLE+MIQ G+ PN   YN+L++GFCL G +
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A+ELFVSM S GC+ +V  Y++LINGYCK  ++E A+ LY+ ML  G +P V TY  L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +V  A KLF  M+ +G+  D + Y  F++GLCKNG + EA+ELF  L+    
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  ++CLIDGLCK+G+L+ AWELF  LP+  L  DVVTYNIMIH  C  G++ KA+ 
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  ME  G  PD + + TL+ G   + +  KVVELLH M +R+
Sbjct: 536 LFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 579



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 196/347 (56%), Gaps = 17/347 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K  G  P VI+Y++L+           A  LF EM+N     GV  +P+ V
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQ----GV--QPNVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG V +AK+LL  M  + I P+++TYNS+I GFC   D N A+ LF+ M
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V+ ++V+++  CK  K+EEA +L   M+Q+G RP+   Y  L+ G    G+V
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK+LF  M+  G   +++ Y I +NG CKN  +  A+ L++++ S  IK  +  +N L
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A++LF+++ +  +  D   Y   I   C+ G +V+A  LF+ +    C
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             D  +Y+ LI G  +S +L+   EL H + +  +  DV   NI+ H
Sbjct: 546 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 589



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 183/380 (48%), Gaps = 22/380 (5%)

Query: 30  CRTGH--TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C+TG+   I A   F  M+  N        P    +T ++ GL K     +   L  QM+
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPT------PPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              I+PD  T N ++   C  N   E   +   ++ +G  P++VT++ ++  LC   ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVF 201
           +A+ L   M ++G  PNA  Y TLM G C TG ++ A +L        S+  +  K  V 
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           SYSI+I+  CK++  + A  L+ EM  +G+ PTV++Y +L          E A +LF+EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEM 295

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              GV  +   +   ID LCK G ++EA +L   +       ++ +Y+ LI+G C  G L
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A ELF S+P      DV+ Y ++I+  C   K+++A  L+  M   G  PD   +  L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  +  +     +L   M
Sbjct: 416 LTGLFQGGKVGDAKKLFGVM 435



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 6/274 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   G  PN++TY++LI G C  G    A  LF  M +        C+PD 
Sbjct: 321 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG------CEPDV 374

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I+G CK   V++A +L   M      PDV TY +++ G        +AK+LF  
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  ++  + + ++ LCKNG + EA +L   +    ++ +   +N L+DG C  G+
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ELF  +     + +V +Y+I+I+ +C+  ++  A  L+ +M   G  P  +TY T
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           L  G FE  ++E+  +L   M +  V+ D    R
Sbjct: 555 LIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 588



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 2/125 (1%)

Query: 281 CKNGYI--VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  ++A + F  +        + S++ L+ GL K       + L++ +    +  
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D  T NI+++ LC   ++ +   +   +  +G  PD V + TL+ G    +  SK   L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 399 HRMDE 403
            RM +
Sbjct: 190 TRMQK 194


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/406 (49%), Positives = 277/406 (68%), Gaps = 13/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +  F C P+ IT   LI+GLCRTG+T  AL L E MINGN +FG+ CKP  V
Sbjct: 195 EAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVV 254

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IID LCK+G V++AKE  ++MK+K I P+VVTY S++ G C A++  EAKRLFIEM
Sbjct: 255 SYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEM 314

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+VVTFSV++  LCK GK++EAS L +LM+Q  V P+   YN L++G+CL G V
Sbjct: 315 VDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMV 374

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  K++F+SM +  C+H+  SYSIL+  YCK+ E+ GA+ LY EM+ +GI+PTV+TY+  
Sbjct: 375 DEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS-- 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---TFIDGLCKNGYIVEALELFRTLRI 298
                   +V  A KLF E+Q   +  D+ +Y     ++DGLCKNG + EAL++F  L  
Sbjct: 433 --------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLEN 484

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   ++  ++ LI+G+C+S +L+IAWELF+ L    L  DVVTY IMI+ LC  G+  K
Sbjct: 485 CKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQK 544

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A+DLFL+ME KG AP+ V FNTLM G   N+E  K+VELLH+M  R
Sbjct: 545 AYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAAR 590



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 8/342 (2%)

Query: 71  CKEG--FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           CK G   + +A     QM      P +  +N++               +   M   G+  
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N ++ +++++ LC   ++ E   +  ++++ G RPN   +  L+ G CL G++  A  +F
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPTVVTYNTLF 242
             M    C+ +  +  +LI+G C+      AL L+  M++     GI  KPTVV+Y+ + 
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   VERA + F EM+  G+  +   Y + + GLC      EA  LF  +      
Sbjct: 261 DSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLL 320

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ ++S LI  LCK G++K A  LF  + +  +     TYNI+I   C  G +D+   +
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKI 380

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           FL M  K    D  +++ LM    +++E    + L   M +R
Sbjct: 381 FLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDR 422


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  356 bits (914), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 186/420 (44%), Positives = 268/420 (63%), Gaps = 22/420 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  A F  +   G  PN++TY+TLI GLC       A  LF  M     + G  C PD V
Sbjct: 122 EGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM----QKLG--CTPDVV 175

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK------NINPDVVTYNSVIRGFCYANDSNEAK 115
            Y T+I GLC  G ++ A +L  +M +       N  P+V+TYN ++ G C     +EAK
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235

Query: 116 RLFIEM----------MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           +LF EM          +DQG+QP++VTF+V++D LCK GK+ EA +LL +MI+ G+ P+ 
Sbjct: 236 QLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 295

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YN+L++GFC+ G +N A+ELFVSM S GC+ +V SY++LINGY K  ++E A+ LY+E
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 355

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML  G +P V+TY++L  G+F   +V+ A KLF  M+ HG+A +++ Y  F+DGLCKN  
Sbjct: 356 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 415

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA++LF  L+    +L+I + +CLIDGLCK+G+L+ AWELF  L       +VVTY I
Sbjct: 416 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 475

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           MIH  C +G++DKA+ L   MEA G  PD + +NTLM G   +N+  +VV+LLHRM +++
Sbjct: 476 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 535



 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 212/399 (53%), Gaps = 45/399 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  GC P+V+TY TLI GLC TG+  +AL L +EM+N    + + CKP+ +
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK---------------------------------- 87
            Y  I+DGLCK G  D+AK+L  +MK                                  
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 88  -----------DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
                      +  I PD+VTYNS+I GFC   D N A+ LF+ M  +G +P+V++++V+
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++   K  K+EEA +L   M+ +G RPN   Y++L+ G  L G+V+ AK+LF  M++ G 
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N ++Y I ++G CKN  +  A+ L++E+ S   K  +   N L  GL +  ++E A++
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 456

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF+++   G   +   Y   I G C+ G + +A  L + +    C  DI +Y+ L+ G  
Sbjct: 457 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 516

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +S +L+   +L H + +  +  D +T +I++  L  D K
Sbjct: 517 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 184/357 (51%), Gaps = 19/357 (5%)

Query: 2   EAAALFTKLKAFG----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE 51
           EA  LF ++K  G           +P+++T++ LI+ LC+ G  I A  L   MI    E
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI----E 288

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G+V  PD V Y ++I+G C  G ++ A+EL + M  K   PDV++YN +I G+      
Sbjct: 289 SGIV--PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 346

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            EA +L+ EM+  G +PNV+T+  ++  +   GK+++A +L  +M   G+  N++ Y   
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C    +  A +LF  ++S   K  + + + LI+G CK  ++E A  L+ ++ ++G 
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P VVTY  +  G     QV++A  L  +M+ +G   D   Y T + G  ++  + E ++
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 526

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           L   +       D  + S ++D L K  + +   E  H LPR  +   V  + +M H
Sbjct: 527 LLHRMAQKDVSPDAITCSIVVDMLSKDEKYQ---ECLHLLPRFPIQKGVDKHLLMTH 580



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 193/394 (48%), Gaps = 24/394 (6%)

Query: 30  CRTGHTIV--ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           C+TG+     AL+ F  M+           P    +  ++ GL K     +   L  QM+
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTP------TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR 96

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              ++ D  T N ++   C  N   E    F  ++ +G  PN+VT++ ++  LC   ++ 
Sbjct: 97  LSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVF 201
           EA++L   M ++G  P+   Y TL+ G C TG +N A +L       +S   + CK NV 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 SYSILINGYCKNKEIEGALSLY----------SEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           +Y+I+++G CK    + A  L+          +EML +G++P +VT+N L   L +  +V
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A KL   M   G+  D   Y + I+G C  G +  A ELF ++    CE D+ SY+ L
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+G  K+ +++ A +L++ +       +V+TY+ ++  +   GK+D A  LF  M+A G+
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A +   +   + G  +N+   + ++L   +   N
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 154/300 (51%), Gaps = 6/300 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   G  P+++TY++LI G C  G    A  LF  M +        C+PD 
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG------CEPDV 330

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+G  K   V++A +L  +M      P+V+TY+S+++G   A   ++AK+LF  
Sbjct: 331 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 390

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  N  T+ + +D LCKN  + EA +L   +     +      N L+DG C  G+
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ELF  + + G + NV +Y+I+I+G+C+  +++ A  L  +M + G  P ++TYNT
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G +E +++E   +L   M +  V+ D       +D L K+    E L L     I K
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  348 bits (892), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 187/406 (46%), Positives = 259/406 (63%), Gaps = 27/406 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  A  T +   G  P+++TY+TLI GLCR  H I                       +V
Sbjct: 28  EGLAAMTGILRRGYIPDIVTYNTLIKGLCRV-HRI-----------------------SV 63

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               IIDGLCK G  D+AKE+  +MK + + P+V++Y+S++ GFC A    E+KRLF EM
Sbjct: 64  ATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEM 123

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQGVQPN+V F+V++D LCK GK+ EA +LLE+ IQ G+  +   YN+L+DGFC  G +
Sbjct: 124 VDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDL 183

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++LF+SM S GC+HN  SY+ILINGYCK  ++E A++LY+EM   G +P V TY+TL
Sbjct: 184 SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTL 243

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V  A KLF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+    
Sbjct: 244 LTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNF 303

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD  SYS LIDGLCK+G+++IAWE F  L +  L  +VVT NIMIH  C   ++DKA+ 
Sbjct: 304 KLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANI 363

Query: 362 LFLDMEA---KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  ME     G  PD + +NTL+ G   +N+  +VV LLH+M +R
Sbjct: 364 LFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 163/315 (51%), Gaps = 18/315 (5%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           ++PD+ T N +    C  N  +E       ++ +G  P++VT++ ++  LC+  ++  A+
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            ++                  +DG C  G  + AKE+F  M++ G   NV SYS L++G+
Sbjct: 66  CII------------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF 107

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   ++E +  L++EM+ +G++P +V +N L   L +  +V  A KL +   + G+  D 
Sbjct: 108 CCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDL 167

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y + IDG CK G +  A +LF ++    CE +  SY+ LI+G CK  +++ A  L++ 
Sbjct: 168 VTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNE 227

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +P+     +V TY+ ++  L   GK+  A+ LF  M+A G++ D   +   + G  +N  
Sbjct: 228 MPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGV 287

Query: 391 TSKVVELLHRMDERN 405
             + +EL + +   N
Sbjct: 288 LFEAMELFNELKSYN 302



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 116/231 (50%), Gaps = 19/231 (8%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G   ++F+ +IL N  C    +   L+  + +L +G  P +VTYNTL  GL  +H+
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 251 V-----------------ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           +                 + A ++F+EM+  G+  +  +Y + + G C  G + E+  LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCA 352
             +     + ++  ++ LID LCK G++  A +L   ++ RG+++ D+VTYN +I   C 
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIIL-DLVTYNSLIDGFCK 179

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G +  A  LFL M +KG   + +++  L+ G  +  +  + + L + M +
Sbjct: 180 IGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ 230


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 183/410 (44%), Positives = 255/410 (62%), Gaps = 12/410 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  A    +   G  P+V+T++TLI GLC     I A  LF  M     + G  C P+ V
Sbjct: 144 EGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM----QKLG--CTPNVV 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK------NINPDVVTYNSVIRGFCYANDSNEAK 115
            Y T+I GLC  G ++ A +   +M +       N  P+V++Y+ +I G C   +  EA 
Sbjct: 198 TYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAI 257

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM+DQGVQPNVVTFSV++D LCK G++ +A +LLE+MIQIG+ PN F Y +L+ GF
Sbjct: 258 CLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGF 317

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           CL G +N AKELFVSM S G + +V SY++LINGYCK  ++E A+ L++EML  G+ P V
Sbjct: 318 CLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDV 377

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T   L   LF   +V+ A +LF  ++ + +  D      F+DGLCKNGYI EA++LF  
Sbjct: 378 KTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNE 437

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           L     +LDI ++ CLIDGLCK+G+L+ AWELF  L    +  D + Y+ MIH  C  G+
Sbjct: 438 LESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQ 497

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +DKA+ LF  ME  G +PD + ++ LM G   +N+  KVV+LLHRM E++
Sbjct: 498 VDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKD 547



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 208/398 (52%), Gaps = 35/398 (8%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF +++  GC PNV+TY TLI GLC  G+  +AL   +EM+N    +   C+P+ 
Sbjct: 178 IEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNV 237

Query: 61  VIYTTIIDGLCK-----------------------------------EGFVDKAKELLLQ 85
           + Y+ IIDGLCK                                   EG V KAK+LL  
Sbjct: 238 ISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEM 297

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M    I P++ TY S+I+GFC   D N AK LF+ M  +G +P+V++++++++  CK  K
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +EEA +L   M+ +G+ P+      L+    L G+V+ AKELF  ++      ++    I
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            ++G CKN  I  A+ L++E+ S  +K  + T+  L  GL +  ++E A++LF+++   G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D  AY + I G CK G + +A  LF+ +    C  D+ +YS L+ G  +S +L+   
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +L H +    +  D   Y I+   +C D K  +  DL 
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++ GL K     +   L  QM    + PD++T N +I   C  N  NE       +M
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+VVTF+ ++  LC   ++ EA++L   M ++G  PN   Y TL+ G C  G +N
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 183 RAKELFVSMES------MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            A +    M +        C+ NV SYSI+I+G CK    E A+ L++EM+ +G++P VV
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T++ L   L +  QV +A KL + M + G+  + + Y + I G C  G +  A ELF ++
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E D+ SY+ LI+G CK+ +++ A +LF+ +    +  DV T  +++ AL   GK+
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D A +LF  ++   +  D       + G  +N    + ++L + ++  N
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYN 442



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 41/334 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G +PNV+T+S LI+ LC+ G  I A  L E MI    + G+V  P+  
Sbjct: 255 EAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMI----QIGIV--PNLF 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G C  G ++ AKEL + M  K   PDV++YN +I G+C      EA +LF EM
Sbjct: 309 TYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368

Query: 122 MDQGVQPNVVT--------------------FSVI---------------MDELCKNGKM 146
           +  G+ P+V T                    F VI               +D LCKNG +
Sbjct: 369 LHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYI 428

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            EA +L   +    ++ +   +  L+DG C  G++  A ELF  +   G + +  +YS +
Sbjct: 429 FEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSM 488

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK  +++ A  L+ +M   G  P ++TY+ L  G +E +++E+  +L   M    V
Sbjct: 489 IHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDV 548

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             D   Y    D +CK+    E L+L +   + K
Sbjct: 549 WPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 151/287 (52%), Gaps = 6/287 (2%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            + ++N ++ G       ++   L+ +M   G+ P+++T +++++ LC   ++ E    +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             +++ G  P+   + TL+ G C+  R+  A +LF+ M+ +GC  NV +Y  LI G C  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 214 KEIEGALSLYSEMLSK------GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             I  AL  + EML+         +P V++Y+ +  GL ++   E A  LF+EM   GV 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   +   ID LCK G +++A +L   +  +    ++ +Y+ LI G C  G L  A EL
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           F S+P      DV++YN++I+  C   K+++A  LF +M   G+ PD
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD 376



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 13/234 (5%)

Query: 176 CLTGR--VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           C TG   V +A + F  M       ++FS++ L+ G  K +      SLY +M   G+ P
Sbjct: 70  CKTGSISVTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            ++T N L   L  ++++         + R G   D   + T I GLC    I+EA +LF
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIA--W--ELFHSLPRGVL--IADVVTYNIMI 347
             ++ L C  ++ +Y  LI GLC  G + IA  W  E+ +     V     +V++Y+I+I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             LC  G  ++A  LF +M  +GV P+ V F+ L+    +  +  K  +LL  M
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  331 bits (849), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/400 (42%), Positives = 249/400 (62%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G EPNVI+Y+T+INGLC+ G+TI+A+ +F +M    G      KP+ V
Sbjct: 184 EAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG------KPNVV 237

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V++A E L +M D+ I PDVVTYN+++ GFC     NEA RLF EM
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V P+ VTF++++D LCK G + EA  + E M + G  PNA+ YN LMDG+CL  ++
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M   GC  N+ SY+ILINGYCK+K +  A  L SEM  K + P  VTY+TL
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ +   A  LF EM   G+  D  AY   +DG CK+G++ EAL+L + +   + 
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +I  Y+ LI G+  +G+L++A ELF  L    +  D+ TYN+MI  L  +G  D+A++
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F  ME  G  PD  ++N ++ G ++N ++S  ++L+  M
Sbjct: 538 FFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F ++      P+V+ +   +  + +      A++L  +M      FGV    +  
Sbjct: 79  DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM----DLFGVT--HNVY 132

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   VD A  ++ +M    I PD +T+N++I G C      EA  LF EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PNV++++ +++ LCKNG    A ++   M Q   +PN   YNT++D  C    V
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A E    M   G   +V +Y+ +++G+C   ++  A  L+ EM+ + + P  VT+N L
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A  + + M   G   + + Y   +DG C +  + EA+++   +    C
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ LI+G CKS R+  A  L   +    L  D VTY+ ++  LC  G+  +A +
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M + G+ PD +A++ L+ G  ++    + ++LL  M ER
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 169/347 (48%), Gaps = 41/347 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    +++   G  P+V+TY+T+++G C  G    A  LF+EM+  N        PD V
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN------VMPDTV 307

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS---------- 111
            +  ++DGLCKEG V +A+ +   M +K   P+  TYN+++ G+C  N            
Sbjct: 308 TFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367

Query: 112 -------------------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                    NEAKRL  EM ++ + P+ VT+S +M  LC+ G+ 
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            EA  L + M   G+ P+   Y+ L+DGFC  G ++ A +L   M     K N+  Y+IL
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTIL 487

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G     ++E A  L+S++ + GI+P + TYN +  GL +    + A++ F +M+  G 
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             D+ +Y   I G  +N     A++L   +   +   D  ++  L+D
Sbjct: 548 LPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 162/330 (49%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   N  P VV +   +         + A  L  +M   GV  NV + +V
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC+   ++ A  ++  M ++G++P+A  +NTL++G C  G++  A  LF  M   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV SY+ +ING CKN     A+ ++ +M     KP VVTYNT+   L +   V  A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +   EM   G+  D   Y T + G C  G + EA  LF+ +       D  +++ L+DGL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G +  A  +  ++       +  TYN ++   C   +MD+A  +   M  KG AP+ 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            ++N L+ G  ++   ++   LL  M E+N
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKN 406


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  330 bits (847), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/400 (42%), Positives = 253/400 (63%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G EPNVI+Y+T+INGLC+TG+T +A+++F++M   NG     CKP+ V
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM-EQNG-----CKPNVV 234

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LCK+  V+ A E L +M ++ I P+V TYNS++ GFC     NEA RLF EM
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN VTF++++D LCK G + EA  + E M + GV P+   YN LMDG+CL   +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK++F  M   GC     SY+ILINGYCK++ ++ A SL +EM  K + P  VTY+TL
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ + + A  LF EM  +G   +   Y   +DG CK+G++ EAL+L ++++  K 
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I  Y+ LI+G+  +G+L++A ELF  L       D+ TY +MI  L  +G  D+A+D
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G  P+  ++N ++ G ++N ++S  + L+  M
Sbjct: 535 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 177/345 (51%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P  V +   +    K+        L  QM    +  +V + N +I   C  N  + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+ P+ +TF+ +++ LC  GK++EA +L   M++ G  PN   Y T+++G C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            TG  + A ++F  ME  GCK NV +YS +I+  CK++ +  A+   SEM+ +GI P V 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN++  G   + Q+  A +LF EM    V  +T  +   +DGLCK G + EA  +F T+
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI +Y+ L+DG C    +  A ++F  + R        +YNI+I+  C   +M
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+A  L  +M  K + PD V ++TLM G  +     + + L   M
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P+V+ +   +    +       ++L  +M      F V    +  
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM----DLFRVT--HNVY 129

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   VD +  +L +M    I+PD +T+N++I G C      EA  LF EM
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM 189

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PNV++++ +++ LCK G    A  + + M Q G +PN   Y+T++D  C    V
Sbjct: 190 VKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLV 249

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A E    M   G   NVF+Y+ +++G+C   ++  A  L+ EM+ + + P  VT+  L
Sbjct: 250 NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A  +F+ M   GV  D   Y   +DG C    + EA ++F  +    C
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                SY+ LI+G CKS R+  A  L   +    L  D VTY+ ++  LC  G+  +A +
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M + G  P+ V +  L+ G  ++    + ++LL  M E+
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEK 472



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 41/347 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A    +++   G  PNV TY+++++G C  G    A  LF+EM+      G    P+ V
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV------GRDVMPNTV 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--- 118
            +T ++DGLCKEG V +A+ +   M +K + PD+ TYN+++ G+C     NEAK++F   
Sbjct: 305 TFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIM 364

Query: 119 --------------------------------IEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                            EM  + + P+ VT+S +M  LC+ G+ 
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA  L + M   G  PN   Y  L+DGFC  G ++ A +L  SM+    + N+  Y+IL
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTIL 484

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G     ++E A  L+S++   G +P + TY  +  GL +    + A+ LF +M+  G 
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             ++ +Y   I G  +N     A+ L   +   +  +++ ++  L+D
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 35/250 (14%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++I  RP+   +   +  F    + +    L   M+     HNV+S +ILIN  C+   
Sbjct: 84  MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ++S+  +M                            FKL       G+  D   +  
Sbjct: 144 VDFSVSVLGKM----------------------------FKL-------GIHPDAITFNA 168

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+GLC  G I EA+ELF  +     E ++ SY+ +I+GLCK+G   +A ++F  + +  
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              +VVTY+ +I +LC D  ++ A +   +M  +G+ P+   +N+++ G     + ++  
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 396 ELLHRMDERN 405
            L   M  R+
Sbjct: 289 RLFKEMVGRD 298



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ AL+ +  M+    +P+VV +        +  Q      L ++M    V  + ++   
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+ LC+  ++  ++ +   +  L    D  +++ LI+GLC  G++K A ELF+ + +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              +V++Y  +I+ LC  G    A D+F  ME  G  P+ V ++T++    ++   +  +
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 396 ELLHRMDER 404
           E L  M ER
Sbjct: 254 EFLSEMVER 262


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 253/400 (63%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G +P+VI+YST+INGLC++G+T +AL L  +M     E G  CKP+ V
Sbjct: 180 EAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM----EEKG--CKPNLV 233

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTTIID LCK+  V+ A +LL +M D+ I PDVVTY++++ GFC     NEA  LF EM
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN VTF++++D LCK G + EA  + E M + G  PNA+ YN LMDG+CL  ++
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++   M   GC   V SY+ILINGYCK + ++ A SL  EM  K + P  VTY+TL
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ + + A  LF EM   G+  D   Y T +DGLCK+G++ EAL+L ++++  K 
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI  Y+ LI+G+  +G+L++A ELF  L    +   + TY IMI  L  +G  D+A++
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G  P+  ++N ++ G ++N ++S  + L+  M
Sbjct: 534 LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/401 (33%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G +P+ IT++TLING C  G    A+ LF EM+    +      PD + 
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ------PDVIS 199

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+I+GLCK G    A +LL +M++K   P++V Y ++I   C     N+A  L  EM+
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+VVT+S I+   C  G + EA+ L   M+   V PN   +  L+DG C  G V+
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ +F +M   G + N ++Y+ L++GYC N +++ A  +   M+ KG  P V +YN L 
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +++ A  L  EM    +  DT  Y T + GLC+ G   EAL LF+ +      
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YS L+DGLCK G L  A +L  S+    +  D+V YNI+I  +   GK++ A +L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  + A G+ P    +  ++ G ++   + +  EL  +M++
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED 540



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 203/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P+V+ +   +  + +       ++L  +M      FGV    +  
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQM----DLFGVT--HNVY 128

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   V  A  +L +M    I PD +T+N++I G C   +  EA  LF EM
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+V+++S +++ LCK+G    A QLL  M + G +PN   Y T++D  C    V
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +L   M   G   +V +YS +++G+C    +  A  L++EM+ + + P  VT+  L
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A  +F+ M + G   + + Y   +DG C N  + EA ++   +    C
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + SY+ LI+G CK  RL  A  L   +    L  D VTY+ ++  LC  G+  +A +
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF +M + G+ PD + ++TL+ G  ++    + ++LL  M E
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQE 470



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 167/312 (53%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++      PN +T++ L++GLC+ G    A  +FE M     E      P+A 
Sbjct: 285 EATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE------PNAY 338

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DG C    +D+A+++L  M DK   P V +YN +I G+C     +EAK L +EM
Sbjct: 339 TYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ VT+S +M  LC+ G+ +EA  L + M   G+ P+   Y+TL+DG C  G +
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L  SM+    + ++  Y+ILI G     ++E A  L+S++ + GI+PT+ TY  +
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIM 518

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +    + A++LF +M+  G   ++ +Y   I G  +N     A+ L   +   + 
Sbjct: 519 IKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF 578

Query: 302 ELDIRSYSCLID 313
             D  ++  L+D
Sbjct: 579 SADSSTFQMLLD 590



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 158/329 (48%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   N  P VV +   +         +    L  +M   GV  NV + ++
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC+   +  A  +L  M ++G++P+A  +NTL++G C+ G +  A  LF  M   G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +V SYS +ING CK+     AL L  +M  KG KP +V Y T+   L +   V  A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L  EM   G+  D   Y T + G C  G++ EA  LF  +       +  +++ L+DGL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G +  A  +F ++ +     +  TYN ++   C + +MD+A  +   M  KG AP  
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++N L+ G  +     +   LL  M E+
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEK 401



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A   F  M  M  + +V  +   +    K K+    +SL ++M   G+   V + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L  ++ V  A  +  +M + G+  D   + T I+G C  G I EA+ LF  +    
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D+ SYS +I+GLCKSG   +A +L   +       ++V Y  +I +LC D  ++ A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL  +M  +G+ PD V ++T++ G       ++   L + M  RN
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 166/403 (41%), Positives = 247/403 (61%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  K+K   C+ +V TY  +I+ LC+ G T  AL++F EMI      G    PD V+
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI------GAGILPDVVV 183

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y++++DGLC+ G + +A E   +M+ + I+ DV TYNS+I G   A    E       M+
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G  P+  TF++++D LCK GK+ EA Q+LELM   G  P+   YNTLM+G CL G++ 
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF S+   G K NVFSY+ILINGYCK+++I+ A  L+ EM  KG+KP+ VTYNTL 
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +V  A KLF EMQ  G       Y   +DGLCKNG++ EA++LF++++  + +
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I  +S L+DG+C++G+L+ AW+ F  + +  L  D + YNI+I+ LC  G + +A  L
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              ME KG  PD + FN ++   ++ NE  + ++LL  M  RN
Sbjct: 484 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 1/178 (0%)

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L +G +P  VT  TL  G++  + +  A +LFDEM   G+  D   Y   I+GLCK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A++L   ++   C+ D+ +Y  +ID LCK G    A ++F  +    ++ DVV Y+ +
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  LC  G++ +A + F +ME +G++ D   +N+L+ G  R     +V   L+ M +R
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  325 bits (832), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 166/400 (41%), Positives = 251/400 (62%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G EPNVI+Y+T+INGLC+TG+T +A+++F++M   NG     CKPD V
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM-EQNG-----CKPDVV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V+ A E L +M D+ I P+V TYN ++ GFC     NEA RLF EM
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V P+ VT ++++D LCK G + EA  + E M + GV PN   YN LMDG+CL   +
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK++F  M   GC   V SY+ILING+CK++ ++ A SL +EM  K + P  VTY+TL
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + + A  +F EM  +G+  +   Y   +DG CK+G++ EAL+L ++++  K 
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I  ++ LI+G+  +G+L++A ELF  L    +   + TY +MI  L  +G  D+A+D
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G  P+  ++N ++ G ++N ++S  + L+  M
Sbjct: 530 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 174/345 (50%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P    +   +    K+        L  QM    +  +V + N +I   C  N  + A  
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+ P   TF+ +++ LC  GK++EA +L   M++ G  PN   YNT+++G C
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            TG  + A ++F  ME  GCK +V +Y+ +I+  CK++ +  A+   SEML +GI P V 
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN +  G   + Q+  A +LF EM    V  DT      +DGLCK G + EA  +F T+
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E +I +Y+ L+DG C    +  A ++F  + R      V +YNI+I+  C   +M
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+A  L  +M  K + PD V ++TLM G  +     + + +   M
Sbjct: 385 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P+V  +   +    +       ++L  +M      FGV    +  
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM----DLFGVT--HNVY 124

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   VD A  +L +M    I+P   T+N++I G C      EA  LF EM
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM 184

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PNV++++ I++ LCK G    A  + + M Q G +P+   YNT++D  C    V
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLV 244

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A E    M   G   NVF+Y+ +++G+C   ++  A  L+ EM+ + + P  VT   L
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A  +F+ M   GV  +   Y   +DG C    + EA ++F  +    C
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + SY+ LI+G CKS R+  A  L   +    L  D VTY+ ++  LC  G+  +A +
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F +M + G+ P+ V ++ L+ G  ++    + ++LL  M E+
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 41/347 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A    +++   G  PNV TY+ +++G C  G    A  LF+EM+      G    PD V
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV------GRDVMPDTV 299

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSV-------------------- 101
             T ++DGLCKEG V +A+ +   M +K + P++ TYN++                    
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359

Query: 102 ---------------IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                          I GFC +   +EAK L  EM  + + P+ VT+S +M  LC+ G+ 
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA  + + M   G+ PN   Y+ L+DGFC  G ++ A +L  SM+    + N+  ++IL
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G     ++E A  L+S++ + GI+PT+ TY  +  GL +    + A+ LF +M+  G 
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             ++ +Y   I G  +N     A+ L   +   +   ++ ++  L+D
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 149/304 (49%), Gaps = 7/304 (2%)

Query: 104 GFCYANDSN----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           GF   N +N    +A   F  M+    +P+V  F   +    K  +      L   M   
Sbjct: 58  GFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLF 117

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV  N +  N L++  C    V+ A  +   M  +G      +++ LING C   +I+ A
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L++EM+ +G +P V++YNT+  GL +      A  +F +M+++G   D   Y T ID 
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LCK+  + +A+E    +       ++ +Y+C++ G C  G+L  A  LF  +    ++ D
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVE 396
            VT  I++  LC +G + +A  +F  M  KGV P+   +N LM G C++   NE  KV E
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 397 LLHR 400
           ++ R
Sbjct: 358 IMIR 361


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 165/403 (40%), Positives = 246/403 (61%), Gaps = 7/403 (1%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  L  K+K   C+ +V TY  +I+ LC+ G T  AL++F EMI      G    PD V+
Sbjct: 1070 AIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMI------GAGILPDVVV 1122

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            Y++++DGLC+ G + +A E   +M+ + I+ DV TYNS+I G   A    E       M+
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 123  DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            D+G  P+  TF++++D LCK GK+ EA Q+LELM   G  P+   YNTLM+G CL G++ 
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             A +LF S+   G K NVFSY+ILINGYCK+++I+ A   + EM  KG+KP+ VTYNTL 
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
              L +  +V  A KLF EMQ  G       Y   +DGLCKNG++ EA++LF++++  + +
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             +I  +S L+DG+C++G+L+ AW+ F  + +  L  D + YNI+I+ LC  G + +A  L
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 1422

Query: 363  FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               ME KG  PD + FN ++   ++ NE  + ++LL  M  RN
Sbjct: 1423 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 141/282 (50%), Gaps = 3/282 (1%)

Query: 125  GVQPNVVTFSVIMDELCKNG--KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            G + ++  F   + + C+ G  K+ +A +L +  +     P    +N L+      G  +
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
                ++  +  +G + ++++ +ILI+  C  + +     ++   L +G +P  VT  TL 
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             G++  + +  A +LFDEM + G+  D   Y   I+GLCK      A++L   ++   C+
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             D+ +Y  +ID LCK G    A ++F  +    ++ DVV Y+ ++  LC  G++ +A + 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 363  FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +ME +G++ D   +N+L+ G  R     +V   L+ M +R
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 3/294 (1%)

Query: 112  NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            N+A +LF   +     P   TF+ ++  + K G       +   +  +G++P+ +  N L
Sbjct: 928  NDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNIL 987

Query: 172  MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            +   C    V     +F      G + +  + + L+ G      I  A+ L+ EM  KG+
Sbjct: 988  IHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGL 1047

Query: 232  KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                 TY  L  GL +  +   A KL ++M +     D + Y   ID LCK+G   EAL+
Sbjct: 1048 LGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALD 1106

Query: 292  LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
            +F  +       D+  YS L+DGLC+ GRLK A E F  +    + ADV TYN +IH L 
Sbjct: 1107 MFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLS 1166

Query: 352  ADGKMDKAHDLFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              G + K    FL+ M  +G +PD   F  L+ G  +  +  +  ++L  M  +
Sbjct: 1167 RAG-LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK 1219


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  320 bits (820), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 172/398 (43%), Positives = 249/398 (62%), Gaps = 12/398 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+TY++LI GLC       A  LF  M     + G  C P+ V Y T+I GLC+ 
Sbjct: 156 GYIPDVVTYTSLIKGLCMEHRISEATRLFIRM----QKLG--CWPNVVTYGTLIKGLCRT 209

Query: 74  GFVDKAKELLLQMKDK------NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           G ++ A +L  +M +       N  P++ +YN +I   C      EAKRLF EM+DQGV+
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+VVTFS ++D LCK G + EA + LE M+  G+ P+ F + +L++GFCL G ++ AKEL
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F+SM S G + +V SY++LI GYCK   +E A+ LY+EML  G  P + T+  L  GLF 
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             +V  A KLF  ++ H V  + +    F+DGLCKNG + EA+ELF  L+    +LDI S
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           ++CLIDGLCK+ +L+ AWELF  L +  L  DVVTY IMI+  C +G++D A+ LF  ME
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMME 509

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G  P+ + ++ L+ G  +NN+  +VV+LLH+M +++
Sbjct: 510 ENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 211/397 (53%), Gaps = 35/397 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           EA  LF +++  GC PNV+TY TLI GLCRTG+  +AL L +EM+NG   + + CK    
Sbjct: 179 EATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIF 238

Query: 58  -------------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
                                          PD V ++ +ID LCKEG V +AK+ L  M
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             + I PD+ T+ S+I GFC   D + AK LF+ M  +G +P+V++++V++   CK   +
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           EEA +L   M+++G  P+   +  L+ G  L G+V  AK+LF  ++      N++  S+ 
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVF 418

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CKN  +  A+ L++E+ S  +K  + ++N L  GL +  ++E A++LF+++ + G+
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I+G CKNG +  A  LF+ +    C  ++ +YS L+ G  K+ +L+   +
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVK 538

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           L H + +  +      Y I+   +  D K  +  D+ 
Sbjct: 539 LLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 575



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 9/320 (2%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK+G +   + L  Q  D  +   ++++N ++         ++   L+ +M   G+ PN 
Sbjct: 70  CKKGNITSTQAL--QFFDLMMR-SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            T +++++ LC   ++ E    +  +++ G  P+   Y +L+ G C+  R++ A  LF+ 
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPTVVTYNTLFIG 244
           M+ +GC  NV +Y  LI G C+   I  AL L+ EML+         KP + +YN +   
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +I + + A +LF+EM   GV  D   +   ID LCK G ++EA +   T+ +     D
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++ LI+G C  G L  A ELF S+P      DV++Y ++I+  C    +++A  L+ 
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
           +M   G  PD   F  L+ G
Sbjct: 367 EMLRVGKWPDMKTFCVLLKG 386



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 163/334 (48%), Gaps = 41/334 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G  P+V+T+S LI+ LC+ G  I A    E M+      G+V  PD  
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLR----GIV--PDLF 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T++I+G C  G +D AKEL L M  K   PDV++Y  +I G+C   +  EA +L+ EM
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368

Query: 122 MDQGVQPNVVTF-----------------------------------SVIMDELCKNGKM 146
           +  G  P++ TF                                   SV +D LCKNG +
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCL 428

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            EA +L   +    ++ +   +N L+DG C   ++  A ELF  +   G + +V +Y I+
Sbjct: 429 FEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIM 488

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+CKN +++ A  L+  M   G  P ++TY+ L  G ++ +++E   KL  +M +  V
Sbjct: 489 INGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     Y    D + K+    E L++ +   + K
Sbjct: 549 SLAASIYTIVEDMVSKDEKCREWLDILQRFPVQK 582



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 175/351 (49%), Gaps = 6/351 (1%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  ++  L K     +   L  +M    ++P+  T N +I   C  N   E       
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +M +G  P+VVT++ ++  LC   ++ EA++L   M ++G  PN   Y TL+ G C TG 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 181 VNRAKELFVSM------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +N A +L   M       ++ CK N+FSY+I+I+  CK  + + A  L++EM+ +G++P 
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVT++ L   L +   V  A K  + M   G+  D + + + I+G C  G +  A ELF 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           ++     E D+ SY+ LI G CK+  ++ A +L++ + R     D+ T+ +++  L   G
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+  A  LF  ++   V  +    +  + G  +N    + +EL + +   N
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYN 442


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 163/403 (40%), Positives = 241/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+PD V
Sbjct: 155 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVV 208

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+IID LCK+  V +A  L  +M  + I+PD+ TY S+I   C   +      L  +M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV FS ++D LCK GK+ EA  ++++MI  GV PN   YN LMDG CL   +
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   G   NV SY+ LINGYCK + ++ A  L+ EM  K + P  VTYNTL
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM  HG   D   YR  +D LCK  ++ EA+ L +T+     
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ +IDG+C++G L+ A ++F +L    L  +V TY IMI+ LC  G +D+A+ 
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF++M+  G +PD   +NT+  G ++N E  + ++LL  M  R
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR 551



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 191/358 (53%), Gaps = 7/358 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+K+   G  P++ TY++LI+ LC          L  +MIN          PD V
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK------IMPDVV 278

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I++T++D LCKEG + +A +++  M  + + P+VVTYN+++ G C  ++ +EA ++F  M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV++++ +++  CK  +M++A+ L E M Q  + PN   YNTLM G C  GR+
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y IL++  CK   ++ A++L   +    + P +  Y  +
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  +F  +   G+  +   Y   I+GLC+ G + EA +LF  +    C
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D  +Y+ +  GL ++     A +L   +      ADV T  +++  LC D K+D++
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQS 575



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M++ +        P  V +  ++  + K         L  QM    I PDV T
Sbjct: 51  ALSSFNRMLHMHP------PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 104

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N +I  FC+ N    A  +  +++  G+QP+  TF+ ++  LC  GK+ +A  L + MI
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   Y TL++G C  G  N A  L  SME   C+ +V  Y+ +I+  CK++++ 
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 224

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L+S+M+ +GI P + TY +L   L  + + +    L ++M    +  D   + T +
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D LCK G I EA ++   + I   E ++ +Y+ L+DG C    +  A ++F ++      
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +V++YN +I+  C   +MDKA  LF +M  K + P+ V +NTLM G          + L
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 398 LHRM 401
            H M
Sbjct: 405 FHEM 408



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P+ + ++ L+  + +T       +L  +M      FG+   PD  
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM----DSFGI--PPDVY 103

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C       A  +L ++    + PD  T+ ++IRG C      +A  LF +M
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +++ LCK G    A +LL  M Q   +P+  VY +++D  C   +V
Sbjct: 164 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 223

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   ++F+Y+ LI+  C   E +   +L ++M++  I P VV ++T+
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++  A  + D M   GV  +   Y   +DG C    + EA+++F T+     
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ LI+G CK  R+  A  LF  + +  LI + VTYN ++H LC  G++  A  
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A G  PD   +  L+    + +   + + LL  ++  N
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSN 447



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 142/293 (48%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P+ V F+ ++  + K  +      L   M   G+ P+ +  
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R   A  +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P VVTY TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  LF  +       DI +Y+ LI  LC     K    L + +    ++ DVV ++ ++ 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC +GK+ +AHD+   M  +GV P+ V +N LM G    +E  + V++   M
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 6/226 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      PN +TY+TL++GLC  G    A+ LF EM+  +G+      PD  
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV-AHGQI-----PDLA 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D LCK+  +D+A  LL  ++  N++PD+  Y  VI G C A +   A+ +F  +
Sbjct: 419 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 478

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNV T++++++ LC+ G ++EA++L   M   G  P+   YNT+  G       
Sbjct: 479 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 538

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            RA +L   M + G   +V + ++L+   C +K  +    + SE +
Sbjct: 539 LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++  Y+ +I+G+CR G    A ++F  + +         +P+  
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG------LRPNVR 488

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC+ G +D+A +L ++M     +PD  TYN++ +G     ++  A +L  EM
Sbjct: 489 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T +++++ LC +   +   Q+L   +Q
Sbjct: 549 LARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  318 bits (816), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 168/404 (41%), Positives = 250/404 (61%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF ++   G EP+VITYST+INGLC+ G T +A+ L ++M     E G  CKP+ 
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM----EEKG--CKPNV 117

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+TIID LCK+  + +A E L +M ++ I+P+VVTY+S++ GFC    SNEA  LF +
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ V P+ VTF++++D L K G + EA  + E MI+ GV PN   YN LMDG+C   +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A++LF  M   GC  +V SY+ILI G+CK+  I+ A  L +EM  K + P  VTY+T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  + + A KL +EM+ +G+  D   Y   +DGLCK G++ EA EL + ++  K
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E +I  Y+ LI G+C  G+L+ A ELF +L    +  DVVTY +MI  L   G  ++A 
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +LF DM   G  P+   +N ++ G +RN +TS    L+  M  R
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 172/318 (54%), Gaps = 2/318 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           M   NI PDV T   +I  FC++N    + A  +   M   G+QPN VTFS +++ L   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            K+ +A +L + M+++G  P+   Y+T+++G C  G    A +L   ME  GCK NV  Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I+  CK+K I  A+   SEM+++GI P VVTY+++  G   + +   A  LF +M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
             V  DT  +   +DGL K G I+EA  +F T+     E ++ +Y+ L+DG C   ++  
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A +LF+ + R      V +YNI+I   C  G++D+A  L  +M  K + PD V ++TLM 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 384 GCIRNNETSKVVELLHRM 401
           G  ++       +LL  M
Sbjct: 301 GFCQDGRPQDAQKLLEEM 318



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 150/278 (53%), Gaps = 6/278 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  +   G EPNV TY+ L++G C       A  LF  M+         C P  
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG------CAPSV 257

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I G CK G +D+AK LL +M  K + PD VTY+++++GFC      +A++L  E
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+++T+S+++D LCK G ++EA +LL+ M +  + PN F+Y  L+ G C  G+
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+ELF ++   G + +V +Y+++I+G  K      A  L+ +M   G  P   TYN 
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           +  G         A +L +EM   G +AD+  ++   D
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 4/178 (2%)

Query: 231 IKPTVVTYNTLFIGLF---EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           I+P V T  T+ I  F          AF +   M + G+  +   + T ++GL     I+
Sbjct: 6   IRPDVYTL-TILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +A++LF  +  +  E D+ +YS +I+GLCK G   +A +L   +       +VV Y+ +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +LC D  + +A +   +M  +G++P+ V +++++ G      +++   L  +M ERN
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  318 bits (815), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 166/404 (41%), Positives = 242/404 (59%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF KL +   CEPN + Y T++NGL + GHT   L+L   M  GN       KPD 
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDV 203

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+ +ID LCK+  +D A  LL +MK KNI P++ TYNS+I G C      + K L  E
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSE 263

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + PNV TFS+++D LCK GK+E+A +++  MI+ GV P+   Y+ +MDG+CL G+
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+RA+ +F  +   G K N+FSYSILINGYCK K +  A+ L+ E+  KG+KP  VTY+T
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL E+ ++  A K+FDEM R G   D   + T + G  K G + EA+ LF  L   +
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I  Y+ +I+GLCK+ R++ A  +F  LP   LI DV TYN+MI   C +G  D+  
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVK 503

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   ME  G   + + +N +M G  R+N+ S++V  +  M  R
Sbjct: 504 GILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGR 547



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 221/468 (47%), Gaps = 67/468 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-------------ING 48
           +A +LF ++      P+VI +S L   +    H    ++LF EM             I  
Sbjct: 45  DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104

Query: 49  NG---------EFGVV-------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNI 91
           N           F V+          + V + T++ GL  E  V  A  L  ++ ++K  
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIMDELCKNGKMEEAS 150
            P+ V Y +V+ G      + +   L + +M+QG  +P+V T+S+++D LCK+  ++ A 
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSL-LRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            LL  M Q  + PN F YN+L+DG C  G+  + K L   M ++    NV ++SILI+G 
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  ++E A  +   M+ KG++P ++TY+ +  G     QV+RA ++F+ ++  G+  + 
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL----KI--- 323
           ++Y   I+G CK   + +A++LF  +     + D  +YS ++ GL + GR+    KI   
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403

Query: 324 ----------------------------AWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                                       A  LF  L R     ++  Y ++I+ LC + +
Sbjct: 404 MLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDR 463

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +AH +F  + + G+ PD   +N ++ G  R     +V  +L +M++
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMED 511



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 171/348 (49%), Gaps = 41/348 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++K     PN+ TY++LI+GLC+ G       L  EM+N N        P+   
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN------INPNVHT 275

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++ +IDGLCKEG V+ A E++  M +K + PD++TY++++ G+C     + A+R+F  + 
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G++PN+ ++S++++  CK   + +A QL   + Q G++P+   Y+T++ G    GR+ 
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395

Query: 183 RAKELFVSMESMG-----CKH------------------------------NVFSYSILI 207
            AK++F  M  +G     C H                              N+  Y+++I
Sbjct: 396 DAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVI 455

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CKN  +  A +++ ++ S G+ P V TYN +  G       +    +  +M+ +G  
Sbjct: 456 NGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCP 515

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           A+   Y   + G  ++  I E +   + +       D  +   LI+ L
Sbjct: 516 ANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 2/278 (0%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF  M+     P+V+ FS +   +           L   M  +G+  +  + N +
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            + +CL  R++ A  +       G   NV +++ L+ G     ++  A+ L+ +++ + I
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 232 -KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +P  V Y T+  GL +    E+   L   M++     D   Y   ID LCK+  +  A+
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L   ++      +I +Y+ LIDGLCK G+ +    L   +    +  +V T++I+I  L
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIR 387
           C +GK++ A ++   M  KGV PD + ++ +M G C+R
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 1/260 (0%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A  L   M+++   P+   ++ L          +    LF  M  +G   +    +I
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           + N YC    I+ A S+    L  GI   VVT+NTL  GLF  ++V  A  LF ++ R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 266 V-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           +   +   Y T ++GL K G+  + L L R +     + D+R+YS +ID LCK   L  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + + +  +  ++ TYN +I  LC  G+ +K   L  +M    + P+   F+ L+ G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +     E++  M E+
Sbjct: 283 LCKEGKVEDADEVMRHMIEK 302


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  318 bits (814), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 165/403 (40%), Positives = 239/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+PD V
Sbjct: 144 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVV 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT+IID LCK+  V +A  L  QM  + I+PD+ TY S++   C   +      L  +M
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 257

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV FS ++D LCK GK+ EA +++++MIQ GV P+   Y TLMDG CL   +
Sbjct: 258 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M   G   +V SY+ LINGYCK  +I+ A+ L+ EM  K   P   TYNTL
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   Y   +D LCKN ++ EA+ L + +     
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI+ Y+ +IDG+C++G L+ A +LF +L    L   V TYNIMIH LC  G +++A+ 
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF++M+    +PD   +NT+  G ++NNET + ++LL  M  R
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 540



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 203/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F +L      P+++ ++ L+  + +  H    L+L  +M      FGV   P+  
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM----DSFGV--PPNVY 92

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    V  A  +L ++      PD  T+ ++IRG C      EA  LF +M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G QPNVVT+  +++ LCK G    A +LL  M Q   +P+  +Y +++D  C   +V
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   ++F+Y+ L++  C   E +   +L ++M++  I P VV ++T+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A ++ D M + GV  D   Y T +DG C    + EA+++F  +     
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ LI+G CK  ++  A  LF  + R   I D  TYN ++H LC  G++  A  
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A+G  PD V ++ L+    +N    + + LL  ++  N
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 186/353 (52%), Gaps = 6/353 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++   G  P++ TY++L++ LC          L  +M+N          PD V
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK------ILPDVV 267

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I++T++D LCKEG V +A E++  M  + + PDVVTY +++ G C  ++ +EA ++F  M
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V++++ +++  CK  K+++A  L E M +    P+   YNTLM G C  GR+
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +YSIL++  CKN  +E A++L   + +  + P +  YN +
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF  +   G+    W Y   I GLCK G + EA +LF  +    C
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             D  +Y+ +  G  ++     A +L   +      ADV T  +++  L  DG
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 13/320 (4%)

Query: 91  INPDVVTYNSVIRGF----CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           ++P +  ++S    F     + N  ++A   F  ++     P++V F+ ++  +    KM
Sbjct: 13  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKM 69

Query: 147 EEASQLLELMIQI---GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           +  S +L L  Q+   GV PN +  N L++ FC   RV  A  +   +  +G + +  ++
Sbjct: 70  KHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTF 129

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI G C   +I  AL L+ +M+ +G +P VVTY TL  GL ++     A +L   M++
Sbjct: 130 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 189

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
                D   Y + ID LCK+  + EA  LF  +       DI +Y+ L+  LC     K 
Sbjct: 190 GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH 249

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
              L + +    ++ DVV ++ ++ ALC +GK+ +AH++   M  +GV PD V + TLM 
Sbjct: 250 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 309

Query: 384 G-CIRN--NETSKVVELLHR 400
           G C+++  +E  KV +++ R
Sbjct: 310 GHCLQSEMDEAVKVFDMMVR 329


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  317 bits (811), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 165/403 (40%), Positives = 239/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+PD V
Sbjct: 153 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVV 206

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT+IID LCK+  V +A  L  QM  + I+PD+ TY S++   C   +      L  +M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV FS ++D LCK GK+ EA +++++MIQ GV P+   Y TLMDG CL   +
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M   G   +V SY+ LINGYCK  +I+ A+ L+ EM  K   P   TYNTL
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   Y   +D LCKN ++ EA+ L + +     
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI+ Y+ +IDG+C++G L+ A +LF +L    L   V TYNIMIH LC  G +++A+ 
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF++M+    +PD   +NT+  G ++NNET + ++LL  M  R
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F +L      P+++ ++ L+  + +  H    L+L  +M      FGV   P+  
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM----DSFGV--PPNVY 101

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    V  A  +L ++      PD  T+ ++IRG C      EA  LF +M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G QPNVVT+  +++ LCK G    A +LL  M Q   +P+  +Y +++D  C   +V
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   ++F+Y+ L++  C   E +   +L ++M++  I P VV ++T+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A ++ D M + GV  D   Y T +DG C    + EA+++F  +     
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ LI+G CK  ++  A  LF  + R   I D  TYN +++ LC  G++  A  
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A+G  PD V ++ L+    +N    + + LL  ++  N
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 152/269 (56%), Gaps = 6/269 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G EP+V+TY+TL++G C       A+ +F+ M+           PD +
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG------FAPDVI 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+G CK   +DKA  L  +M  K   PD  TYN+++ G C+     +A  LF EM
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++VT+S+++D LCKN  +EEA  LL+ +    + P+  VYN ++DG C  G +
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF ++ S G   +V++Y+I+I+G CK   +  A  L+ EM      P   TYNT+
Sbjct: 467 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 526

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             G  + ++  RA +L +EM   G +AD+
Sbjct: 527 ARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 13/320 (4%)

Query: 91  INPDVVTYNSVIRGF----CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           ++P +  ++S    F     + N  ++A   F  ++     P++V F+ ++  + K   M
Sbjct: 22  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAK---M 78

Query: 147 EEASQLLELMIQI---GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           +  S +L L  Q+   GV PN +  N L++ FC   RV  A  +   +  +G + +  ++
Sbjct: 79  KHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTF 138

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI G C   +I  AL L+ +M+ +G +P VVTY TL  GL ++     A +L   M++
Sbjct: 139 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 198

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
                D   Y + ID LCK+  + EA  LF  +       DI +Y+ L+  LC     K 
Sbjct: 199 GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH 258

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
              L + +    ++ DVV ++ ++ ALC +GK+ +AH++   M  +GV PD V + TLM 
Sbjct: 259 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 318

Query: 384 G-CIRN--NETSKVVELLHR 400
           G C+++  +E  KV +++ R
Sbjct: 319 GHCLQSEMDEAVKVFDMMVR 338


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  317 bits (811), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 163/403 (40%), Positives = 239/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVV 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +++T+ID LCK+  V +A  +  +M  K I+P++VTYNS+I G C   +      L  EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+V T + ++D LCK G + EA  ++++MI  GV PN   YN LMDG CL   V
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P  VTYNTL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +     
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M   G +P+   +N +  G +RNNE  + +ELL  M  R
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 215/401 (53%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G +P+  T++TLI GLC  G    AL+LF++MI G G      +P+ V 
Sbjct: 124 AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI-GEG-----FQPNVVT 177

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK G    A  LL  M+  N  P+VV ++++I   C      EA  +F EM+
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+VT++ ++  LCK  + +  + L+  M+   + P+ F  NT++D  C  G V 
Sbjct: 238 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVA 297

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G + NV +Y+ L++G+C   E++ A+ ++  M+ K     V++YNTL 
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +I  V++A  LF+EM R  +  +T  Y T I GLC  G + +A+ LF  +      
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L D LCK+  L  A  L  ++       D+  Y  ++  +C  G+++ A DL
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F ++ +KG+ P+   +N ++ G  +    ++  +L   M++
Sbjct: 478 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 200/404 (49%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F ++      P+ + ++ L+  + +T H    L+L  +M      FG+   PD  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM----DSFGI--PPDVY 106

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC    VD A   L ++      PD  T+ ++IRG C      EA  LF +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +++ LCK G    A +LL  M Q   +PN  V++TL+D  C   +V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M + G   N+ +Y+ LI+G CK  E +   +L +EM+   I P V T NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  A  + D M   GV  +   Y   +DG C    +  A+++F T+    C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ LI+G CK   +  A  LF  + R  L  + VTYN +IH LC  G++  A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A+G  PD V + TL     +N    K + LL  ++  N
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+++   G  PN++TY++LI+GLC+         L  EM++          PD  
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK------IMPDVF 281

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T++D LCKEG V +A +++  M  + + P+VVTYN+++ G C  N+ + A ++F  M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +    NV++++ +++  CK   +++A  L E M +  + PN   YNTL+ G C  GR+
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y  L +  CKN+ ++ A++L   +      P +  Y T+
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF  +   G+  + W Y   I GLCK G + EA +LF  +    C
Sbjct: 462 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 521

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADG 354
             +  +Y+ +  G  ++       EL    L RG  + DV T  +++  L  DG
Sbjct: 522 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLLVGMLSDDG 574



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 35/364 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A     +M  K   P  V +N ++         +    L  +M   G+ P+V T ++
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC   +++ A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 196 CKHNVFSYSILING-----------------------------------YCKNKEIEGAL 220
            + NV +Y  LING                                    CK++++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +++SEM++KGI P +VTYN+L  GL ++ + +    L +EM    +  D +   T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G + EA ++   +     E ++ +Y+ L+DG C    + +A ++F ++     +A+V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           ++YN +I+  C    +DKA  LF +M  + + P+ V +NTL+ G          + L H 
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 401 MDER 404
           M  R
Sbjct: 411 MVAR 414



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           ++N+      + N  +EA   F  M+ +   P+ V F+ ++  + K         L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ +    +++  C   RV+ A      +  +G + +  +++ LI G C   +I
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL L+ +M+ +G +P VVTY TL  GL ++     A +L   M++     +   + T 
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ID LCK+  + EA  +F  +       +I +Y+ LI GLCK    K    L + +    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN 388
           + DV T N ++ ALC +G + +AHD+   M  +GV P+ V +N LM G C+RN
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL   ++    +P++  Y+T+++G+CR G    A +LF  + +         +P+  
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVW 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLCK+G + +A +L  +M     +P+  TYN + RGF   N++     L  EM
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T ++++  L  +G  +   Q+L   +Q
Sbjct: 552 LARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  317 bits (811), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 163/403 (40%), Positives = 239/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVV 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +++T+ID LCK+  V +A  +  +M  K I+P++VTYNS+I G C   +      L  EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+V T + ++D LCK G + EA  ++++MI  GV PN   YN LMDG CL   V
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P  VTYNTL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +     
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M   G +P+   +N +  G +RNNE  + +ELL  M  R
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 215/401 (53%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G +P+  T++TLI GLC  G    AL+LF++MI G G      +P+ V 
Sbjct: 124 AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI-GEG-----FQPNVVT 177

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK G    A  LL  M+  N  P+VV ++++I   C      EA  +F EM+
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMI 237

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+VT++ ++  LCK  + +  + L+  M+   + P+ F  NT++D  C  G V 
Sbjct: 238 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVA 297

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G + NV +Y+ L++G+C   E++ A+ ++  M+ K     V++YNTL 
Sbjct: 298 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 357

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +I  V++A  LF+EM R  +  +T  Y T I GLC  G + +A+ LF  +      
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 417

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L D LCK+  L  A  L  ++       D+  Y  ++  +C  G+++ A DL
Sbjct: 418 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F ++ +KG+ P+   +N ++ G  +    ++  +L   M++
Sbjct: 478 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 200/404 (49%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F ++      P+ + ++ L+  + +T H    L+L  +M      FG+   PD  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM----DSFGI--PPDVY 106

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC    VD A   L ++      PD  T+ ++IRG C      EA  LF +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +++ LCK G    A +LL  M Q   +PN  V++TL+D  C   +V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M + G   N+ +Y+ LI+G CK  E +   +L +EM+   I P V T NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  A  + D M   GV  +   Y   +DG C    +  A+++F T+    C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ LI+G CK   +  A  LF  + R  L  + VTYN +IH LC  G++  A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A+G  PD V + TL     +N    K + LL  ++  N
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+++   G  PN++TY++LI+GLC+         L  EM++          PD  
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK------IMPDVF 281

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T++D LCKEG V +A +++  M  + + P+VVTYN+++ G C  N+ + A ++F  M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +    NV++++ +++  CK   +++A  L E M +  + PN   YNTL+ G C  GR+
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y  L +  CKN+ ++ A++L   +      P +  Y T+
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF  +   G+  + W Y   I GLCK G + EA +LF  +    C
Sbjct: 462 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 521

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADG 354
             +  +Y+ +  G  ++       EL    L RG  + DV T  +++  L  DG
Sbjct: 522 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLLVGMLSDDG 574



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 35/364 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A     +M  K   P  V +N ++         +    L  +M   G+ P+V T ++
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC   +++ A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 196 CKHNVFSYSILING-----------------------------------YCKNKEIEGAL 220
            + NV +Y  LING                                    CK++++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +++SEM++KGI P +VTYN+L  GL ++ + +    L +EM    +  D +   T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G + EA ++   +     E ++ +Y+ L+DG C    + +A ++F ++     +A+V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           ++YN +I+  C    +DKA  LF +M  + + P+ V +NTL+ G          + L H 
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 401 MDER 404
           M  R
Sbjct: 411 MVAR 414



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           ++N+      + N  +EA   F  M+ +   P+ V F+ ++  + K         L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ +    +++  C   RV+ A      +  +G + +  +++ LI G C   +I
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL L+ +M+ +G +P VVTY TL  GL ++     A +L   M++     +   + T 
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ID LCK+  + EA  +F  +       +I +Y+ LI GLCK    K    L + +    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN 388
           + DV T N ++ ALC +G + +AHD+   M  +GV P+ V +N LM G C+RN
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL   ++    +P++  Y+T+++G+CR G    A +LF  + +         +P+  
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVW 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLCK+G + +A +L  +M     +P+  TYN + RGF   N++     L  EM
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + +G   +V T ++++  L  +G  +   Q+L
Sbjct: 552 LARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/403 (40%), Positives = 250/403 (62%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  + A G +P+V TY+T+INGLC+ G T+ A  LF +M    GE G  C+PD V
Sbjct: 210 QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM----GEAG--CQPDVV 263

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LCK+  V++A ++   MK K I+P++ TYNS+I+G C  +   EA  +  EM
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 323

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + PN+VTFS++++  CK G + EA  +L+ M ++GV PN   Y++LM+G+ L   V
Sbjct: 324 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 383

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M + GCK +VFSY+ILINGYCK K I  A  L++EM+ +G+ P +V+YNTL
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A  LF  M  +G   D   Y   +DG CK GY+ +A  LFR ++    
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LID +CKS  LK A +LF  L    L  +V  Y  +I+ LC +G +D+A +
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +ME  G  P+  ++N ++ G +++ + S+ V+L+  M E+
Sbjct: 564 AFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 6/341 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+ +KA G  PN+ TY++LI GLC       A  +  EM++ N        P+ V
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I+  CKEG V +A+ +L  M +  + P+VVTY+S++ G+    +  EA++LF  M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P+V +++++++  CK  ++ EA QL   MI  G+ P+   YNTL+DG C  GR+
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF +M + G   ++ +YSIL++G+CK   +  A  L+  M S  +KP +V YN L
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              + +   ++ A KLF E+   G+  +   Y T I+GLCK G + EALE FR +    C
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
             +  SY+ +I G  +      A +L   +     +ADV T
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 202/403 (50%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F  +      P +I ++ L++ + +  H   A+    + +   G       PD  
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAG-----LSPDTY 158

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+   +   VD    +L ++    +   +VT+N++I G C      +A  LF +M
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+V T++ I++ LCK G+   A+ L   M + G +P+   Y+T++D  C   RV
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++F  M++ G   N+F+Y+ LI G C       A ++ +EM+S  I P +VT+ +L
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF-SL 337

Query: 242 FIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            I +F +   V  A  +   M   GV  +   Y + ++G      +VEA +LF  +    
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D+ SY+ LI+G CK+ R+  A +LF+ +    L  D+V+YN +I  LC  G++ +AH
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DLF +M   G  PD   ++ L+ G  +    +K   L   M  
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 134/237 (56%), Gaps = 6/237 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  +   GC+P+V +Y+ LING C+      A  LF EMI+          PD 
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG------LTPDI 437

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+IDGLC+ G + +A +L   M      PD+ TY+ ++ GFC      +A RLF  
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 497

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++PN+V +++++D +CK+  ++EA +L   +   G++PN  +Y T+++G C  G 
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           ++ A E F +ME  GC  N FSY+++I G+ ++K+   A+ L  EM  KG    V T
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 166/403 (41%), Positives = 238/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF K+   G +PNV+TY TLINGLC+ G T  A+ L   M  GN      C+PD V
Sbjct: 147 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVV 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+IID LCK+  V +A  L  +M  + I+P + TYNS+I   C   +      L  EM
Sbjct: 201 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV FS ++D LCK GK+ EA  ++++MI+ GV PN   YN LMDG CL   +
Sbjct: 261 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   G   +V SYS LINGYCK + IE A+ L+ EM  K + P  VTY+TL
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D  +Y   +D LCKN  + EA+ L + +     
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ +IDG+C++G L+ A +LF +L    L  +V TY IMI+ LC  G + +A  
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+ KG +P+   +N +  G +RNNET + ++LL  M  R
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 543



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P++  ++ L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM----DSFGI--PPNIY 95

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L ++      P++ T+N++IRG C      E   LF +M
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +++ LCK G    A +LL  M Q   +P+  VY +++D  C   +V
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  M   G   ++F+Y+ LI+  C   E +   +L +EM++  I P VV ++T+
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A  + D M + GV  +   Y   +DG C    + EA+++F T+     
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS LI+G CK  R++ A  LF  + R  LI + VTY+ ++H LC  G++  A  
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 395

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M  +G  PD V++  L+    +N    + + LL  ++  N
Sbjct: 396 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 439



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 12/287 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK--- 57
           MEA  +   +   G EPNV+TY+ L++G C       A+ +F+ M         VCK   
Sbjct: 286 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM---------VCKGFA 336

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V Y+T+I+G CK   ++KA  L  +M  K + P+ VTY++++ G C+     +A  L
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+ +G  P+ V++ +++D LCKN +++EA  LL+ +    + P+  +Y  ++DG C 
Sbjct: 397 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 456

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G +  A++LF ++ S G   NV++Y+I+ING C+   +  A  L+ EM  KG  P   T
Sbjct: 457 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 516

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           YN +  G    ++  R  +L  EM   G +AD       ++ L  +G
Sbjct: 517 YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 154/326 (47%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   +  P +  +  ++         +    L  +M   G+ PN+ T ++
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   ++  A  +L  ++++G +PN   +NTL+ G C+ G++     LF  M   G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +P VV Y ++   L +  QV +AF
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LF EM   G++   + Y + I  LC          L   +   K   ++  +S ++D L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G++  A ++   + +  +  +VVTYN ++   C   +MD+A  +F  M  KG APD 
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V+++TL+ G  +     K + L   M
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEM 365



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 3/293 (1%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P++  F+ ++  + K         L   M   G+ PN +  
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + N+ +++ LI G C   +I   L L+ +M+ 
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P VVTY TL  GL ++     A +L   M++     D   Y + ID LCK+  + +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  LF  +        I +Y+ LI  LC     K    L + +    ++ +VV ++ ++ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELL 398
           ALC +GK+ +AHD+   M  +GV P+ V +N LM G C+R+  +E  KV + +
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++  Y+ +I+G+CR G    A +LF  + +          P+  
Sbjct: 427 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVW 480

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC++G + +A +L  +MK K  +P+  TYN + RGF   N++    +L  EM
Sbjct: 481 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T +V+++ L  +G  +   Q+L   +Q
Sbjct: 541 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/403 (41%), Positives = 238/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF K+   G +PNV+TY TLINGLC+ G T  A+ L   M  GN      C+PD V
Sbjct: 156 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVV 209

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+IID LCK+  V +A  L  +M  + I+P + TYNS+I   C   +      L  EM
Sbjct: 210 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 269

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV FS ++D LCK GK+ EA  ++++MI+ GV PN   YN LMDG CL   +
Sbjct: 270 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   G   +V SYS LINGYCK + IE A+ L+ EM  K + P  VTY+TL
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D  +Y   +D LCKN  + EA+ L + +     
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ +IDG+C++G L+ A +LF +L    L  +V TY IMI+ LC  G + +A  
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+ KG +P+   +N +  G +RNNET + ++LL  M  R
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 552



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P++  ++ L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM----DSFGI--PPNIY 104

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L ++      P++ T+N++IRG C      E   LF +M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +++ LCK G    A +LL  M Q   +P+  VY +++D  C   +V
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  M   G   ++F+Y+ LI+  C   E +   +L +EM++  I P VV ++T+
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A  + D M + GV  +   Y   +DG C    + EA+++F T+     
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS LI+G CK  R++ A  LF  + R  LI + VTY+ ++H LC  G++  A  
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 404

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M  +G  PD V++  L+    +N    + + LL  ++  N
Sbjct: 405 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSN 448



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 12/287 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK--- 57
           MEA  +   +   G EPNV+TY+ L++G C       A+ +F+ M         VCK   
Sbjct: 295 MEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM---------VCKGFA 345

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V Y+T+I+G CK   ++KA  L  +M  K + P+ VTY++++ G C+     +A  L
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+ +G  P+ V++ +++D LCKN +++EA  LL+ +    + P+  +Y  ++DG C 
Sbjct: 406 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 465

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G +  A++LF ++ S G   NV++Y+I+ING C+   +  A  L+ EM  KG  P   T
Sbjct: 466 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 525

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           YN +  G    ++  R  +L  EM   G +AD       ++ L  +G
Sbjct: 526 YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 154/326 (47%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   +  P +  +  ++         +    L  +M   G+ PN+ T ++
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   ++  A  +L  ++++G +PN   +NTL+ G C+ G++     LF  M   G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +P VV Y ++   L +  QV +AF
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LF EM   G++   + Y + I  LC          L   +   K   ++  +S ++D L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G++  A ++   + +  +  +VVTYN ++   C   +MD+A  +F  M  KG APD 
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V+++TL+ G  +     K + L   M
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEM 374



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 3/293 (1%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P++  F+ ++  + K         L   M   G+ PN +  
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + N+ +++ LI G C   +I   L L+ +M+ 
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P VVTY TL  GL ++     A +L   M++     D   Y + ID LCK+  + +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  LF  +        I +Y+ LI  LC     K    L + +    ++ +VV ++ ++ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELL 398
           ALC +GK+ +AHD+   M  +GV P+ V +N LM G C+R+  +E  KV + +
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++  Y+ +I+G+CR G    A +LF  + +          P+  
Sbjct: 436 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVW 489

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC++G + +A +L  +MK K  +P+  TYN + RGF   N++    +L  EM
Sbjct: 490 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T +V+++ L  +G  +   Q+L   +Q
Sbjct: 550 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  311 bits (796), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 161/403 (39%), Positives = 240/403 (59%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+PD V
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVV 210

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+IID LCK+  V +A  L  +M  + I+PD+ TY S+I   C   +      L  +M
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV FS ++D LCK GK+ EA  ++++MI  GV PN   YN LMDG CL   +
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   G   NV SY+ LINGYCK + ++ A  L+ EM  K + P  VTYNTL
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +    + +++ A  LF EM  HG   D   YR  +D LCK  ++ EA+ L +T+     
Sbjct: 391 -MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ +IDG+C++G L+ A ++F +L    L  +V TY IMI+ LC  G +D+A+ 
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 509

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF++M+  G +PD   +NT+  G ++N E  + ++LL  M  R
Sbjct: 510 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR 552



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 7/364 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M++ +        P  V +  ++  + K         L  QM    I PDV T
Sbjct: 53  ALSSFNRMLHMHP------PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 106

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N +I  FC+ N    A  +  +++  G QP+  TF+ ++  LC  GK+ +A  L + MI
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   Y TL++G C  G  N A  L  SME   C+ +V  Y+ +I+  CK++++ 
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L+S+M+ +GI P + TY +L   L  + + +    L ++M    +  D   + T +
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D LCK G I EA ++   + I   E ++ +Y+ L+DG C    +  A ++F ++      
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +V++YN +I+  C   +MDKA  LF +M  K + P+ V +NTLM  C         + L
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIAL 405

Query: 398 LHRM 401
            H M
Sbjct: 406 FHEM 409



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 42/350 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+K+   G  P++ TY++LI+ LC          L  +MIN          PD V
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK------IMPDVV 280

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I++T++D LCKEG + +A +++  M  + + P+VVTYN+++ G C  ++ +EA ++F  M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV++++ +++  CK  +M++A+ L E M Q  + PN   YNTLM   C  GR+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399

Query: 182 NRAKELFVSMESMG---------------CKH--------------------NVFSYSIL 206
             A  LF  M + G               CK                     ++  Y+I+
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C+  E+E A  ++S + SKG++P V TY  +  GL     ++ A KLF EM  +G 
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D   Y T   GL +N   + A++L + +       D+ + + L++ LC
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 150/270 (55%), Gaps = 7/270 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EPNV+TY+ L++G C       A+ +F+ M++ NG       P+ + Y T+I+G CK 
Sbjct: 309 GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH-NGY-----APNVISYNTLINGYCKI 362

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +DKA  L  +M  K + P+ VTYN+++   C+     +A  LF EM+  G  P++ T+
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATY 421

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +++D LCK   ++EA  LL+ +    + P+  +Y  ++DG C  G +  A+++F ++ S
Sbjct: 422 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 481

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + NV +Y+I+ING C+   ++ A  L+ EM   G  P   TYNT+  GL +  +  R
Sbjct: 482 KGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALR 541

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           A +L  EM   G +AD       ++ LC +
Sbjct: 542 AIQLLQEMLARGFSADVSTTTLLVEMLCDD 571



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 143/293 (48%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P+ V F+ ++  + K  +      L   M   G+ P+ +  
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P VVTY TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  LF  +       DI +Y+ LI  LC     K    L + +    ++ DVV ++ ++ 
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC +GK+ +AHD+   M  +GV P+ V +N LM G    +E  + V++   M
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 28/254 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVVC 56
           EA  +F  +   G  PNVI+Y+TLING C+      A  LFEEM     I     +  + 
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 391

Query: 57  K-----------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                   PD   Y  ++D LCK+  +D+A  LL  ++  N++P
Sbjct: 392 HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 451

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D+  Y  VI G C A +   A+ +F  +  +G++PNV T++++++ LC+ G ++EA++L 
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M   G  P+   YNT+  G        RA +L   M + G   +V + ++L+   C +
Sbjct: 512 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571

Query: 214 KEIEGALSLYSEML 227
           K  +    + SE +
Sbjct: 572 KLDQSVKQILSEFV 585



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++  Y+ +I+G+CR G    A ++F  + +         +P+  
Sbjct: 436 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG------LRPNVR 489

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC+ G +D+A +L ++M     +PD  TYN++ +G     ++  A +L  EM
Sbjct: 490 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T +++++ LC +   +   Q+L   +Q
Sbjct: 550 LARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 35/190 (18%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ ML     P+ V +N L   + +  Q    F L ++M   G+  D +    
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY---- 105

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
                              TL IL            I+  C   RL  A+ +   + +  
Sbjct: 106 -------------------TLNIL------------INSFCHLNRLGFAFSVLAKILKLG 134

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              D  T+  +I  LC +GK+  A  LF  M  +G  P+ V + TL+ G  +   T+  +
Sbjct: 135 HQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 194

Query: 396 ELLHRMDERN 405
            LL  M++ N
Sbjct: 195 RLLRSMEQGN 204


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  310 bits (795), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 156/403 (38%), Positives = 239/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F   +A GC+P V TY+T+INGLC+ G T  A  LF++M          C+P+ V
Sbjct: 183 QAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVV 236

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK+  V++A ++   MK K I+PD+ TYNS+I+G C      EA  L  EM
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN+ TF+V++D +CK GK+ EA  + + M ++GV P+   Y++LM G+ L   +
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEI 356

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF +M + GCK + FSY+ILI GYCK K I+ A  L++EM+ +G+ P  V YNTL
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A  LF  M  +G   D + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYL 476

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI  Y+ LID +CK G LK A +LF  L    L+ +V  Y  +I+ LC +G +D+A +
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +ME  G  PD  ++N ++ G ++  + S+  +L+  M +R
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 186/385 (48%), Gaps = 5/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P +I ++ L++ + + G    A+    + +   G       PD    + +ID       V
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAG-----LSPDIYTLSILIDCFSHLQRV 146

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  +  +M    + PD VT+N++I G C      +A   F +    G QP V T++ I
Sbjct: 147 DLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTI 206

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LCK G+   A+ L + M + G +PN   YN L+D  C    VN A ++F  M++   
Sbjct: 207 INGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRI 266

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++F+Y+ LI G C  +  + A +L +EM S  I P + T+N L   + +  +V  A  
Sbjct: 267 SPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQG 326

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F  M   GV  D   Y + + G      IVEA +LF  +    C+ D  SY+ LI G C
Sbjct: 327 VFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYC 386

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+ R+  A +LF+ +    L  D V YN +IH LC  G++ +A DLF +M + G  PD  
Sbjct: 387 KAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLF 446

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            ++ L+ G  +     K   L   M
Sbjct: 447 TYSMLLDGFCKEGYLGKAFRLFRVM 471



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 139/274 (50%), Gaps = 10/274 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   G EP+V+TYS+L+ G       + A  LF+ MI         CKPDA 
Sbjct: 323 EAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG------CKPDAF 376

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK   +D+AK+L  +M  + + PD V YN++I G C      EA+ LF  M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P++ T+S+++D  CK G + +A +L  +M    ++P+  +YN L+D  C  G +
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  +   G   NV  Y+ +IN  CK   ++ AL  +  M   G  P   +YN +
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD----TW 271
             G  +     RA +L  EM+  G  A+    TW
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 125/230 (54%), Gaps = 6/230 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  +   GC+P+  +Y+ LI G C+      A  LF EMI+          PD 
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG------LTPDN 410

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLC+ G + +A++L   M      PD+ TY+ ++ GFC      +A RLF  
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++P++  +++++D +CK G +++A +L   +   G+ PN  +Y T+++  C  G 
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ A E F +ME  GC  + FSY+++I G+ + K+   A  L  EM  +G
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 112/214 (52%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            ME  G   ++++ SILI+ +   + ++ A S++S+M+  G++P  VT+NTL  GL ++ 
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +  +A + FD+ +  G     + Y T I+GLCK G    A  LF+ +    C+ ++ +Y+
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LID LCK   +  A ++F  +    +  D+ TYN +I  LC   +  +A  L  +M + 
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + P+   FN L+    +  + S+   +   M E
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 4/215 (1%)

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGA-LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           E + C   +  ++ L++   K  +  GA +SL  +M   G+ P + T + L      + +
Sbjct: 89  EPLPC---IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQR 145

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+ AF +F +M + G+  D   + T I+GLCK G   +A+E F       C+  + +Y+ 
Sbjct: 146 VDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTT 205

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +I+GLCK G    A  LF  +       +VVTYNI+I +LC D  +++A D+F  M+AK 
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++PD   +N+L+ G        +   LL+ M   N
Sbjct: 266 ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  310 bits (794), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 164/403 (40%), Positives = 236/403 (58%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G  P+V+TY TLINGLC+ G+T  A+ L   M+  N      C+P+  
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVF 202

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V +A  L  +M  K I+PD+ TYNS+I   C   +      L  EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+VV+F+ ++D LCK GK+ EA  +++ MIQ GV PN   Y  LMDG CL   +
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + P  VTY+TL
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM       +   YR  +D LCKN Y+ EA+ L + +     
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+  +  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+  G   +   +NT+  G +RNNETS+ ++LL  M  R
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 545



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 202/403 (50%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F ++      P+ + ++ L+  + +  H    L+L  +M      FG+   P+   
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM----DSFGI--PPNIYT 98

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              +I+  C    V  A  +L ++      PD  T+ ++IRG        EA  LF +M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+VVT+  +++ LCK G    A +LL  M+Q   +PN F YNT++D  C   +V 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M + G   ++F+Y+ LI+  C   E +   +L +EM+   I P VV++NT+ 
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +V  A  + D+M + GV  +   Y   +DG C    + EA+++F T+    C 
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ SY+ LI+G CK  R+  A  LF  + R  LI D VTY+ +IH LC   ++  A  L
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F +M A    P+ V +  L+    +N   ++ + LL  ++  N
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++   G  P++ TY++LI+ LC          L  EM++          PD V
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK------IMPDVV 272

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++D LCKEG V +A +++ +M  + + P+VVTY +++ G C  ++ +EA ++F  M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV++++ +++  CK  ++++A  L   M +  + P+   Y+TL+ G C   R+
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 392

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M +     N+ +Y IL++  CKN+ +  A++L   +    + P +   N  
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 452

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF  +   G+  D W Y   I+GLC+ G + EA +LFR +    C
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 512

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            L+   Y+ +  G  ++     A +L   +      AD  T  + +  L  DG
Sbjct: 513 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++   +  I+G+CR G    A +LF  + +         +PD  
Sbjct: 429 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVW 482

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLC+ G +D+A +L  +M +     +   YN++ RGF   N+++ A +L  EM
Sbjct: 483 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +  T ++ +  L  +G  +   Q+L   +Q
Sbjct: 543 VARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 80/186 (43%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+GA+S ++ ML     P+ V +N L   + ++        L  +M   G+  + +    
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+  C    +  A  +   +  L  + D  +++ LI G+   G++  A  LF  +    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              DVVTY  +I+ LC  G    A  L   M  K   P+  A+NT++    ++ + ++  
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 396 ELLHRM 401
            L   M
Sbjct: 222 NLFSEM 227


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/403 (39%), Positives = 238/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +P+V+ Y+TLINGLC+TGHT  A+ L   M  GN      C+PD V
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN------CQPDVV 215

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I  LCK+    +A  L  +M  K I+P++VT NS++   C   +      L  EM
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + PN ++ + ++D LCK G + +A  ++++M Q GV P+   Y  L+DG CL   +
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M   GC  NVFSY+ LINGYCK + ++ A+ L+ EM  + + P  VTYNTL
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ +A+ L + +     
Sbjct: 396 IHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNL 455

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+ Y+ +IDG+C++G L+ A +LF +L    L  +V TYNIM H LC  G +D+A  
Sbjct: 456 DPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATK 515

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF++M+    + D   +NT+  G +RNNETS+ ++LL  M  R
Sbjct: 516 LFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR 558



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 189/403 (46%), Gaps = 41/403 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M++ +        P  V +  I+  + K         L  +M    I  +V T
Sbjct: 58  ALSSFNRMLHMHP------PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYT 111

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N +I  FC+ N  N A  +  +++  G QP+  +F+ ++  LC  G++ EA  L + MI
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI 171

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +P+  +Y TL++G C TG  + A  L  SME   C+ +V  Y  LI+  CK+++  
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ--------------------------- 250
            A +L+SEM++KGI P +VT N+L   L  + +                           
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291

Query: 251 --------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                   V +A  + D M + GV  D   Y   IDG C    + EA+++F  +    C 
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ SY+ LI+G CK  R+  A  LF  + R  LI + VTYN +IH LC  G++  A  L
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F +M A G  PD V +  L+    +N    K + LL  ++  N
Sbjct: 412 FREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 3/304 (0%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N     + + N  ++A   F  M+     P++V F+ I+  + K  +      L   M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+  N +  N L++ FC   RVN A  +   +  +GC+ +  S++ LI G C   +I 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L+ +M+ +G +P VV Y TL  GL +      A +L   M++     D   Y T I
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LCK+    +A  LF  +       +I + + L+  LC  G  K    L + +    ++
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKV 394
            + ++   ++ ALC +G + +AHD+   M   GV PD V +  L+ G C+R+  +E  KV
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 395 VELL 398
            +++
Sbjct: 342 FDMM 345



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 115/237 (48%)

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           + ++N     +     ++ A   F  M  M    ++  ++ ++    K K     LSL  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M S GI   V T N L      +++V  AF +  ++ + G   DT ++ T I GLC  G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            I EAL LF  +     + D+  Y+ LI+GLCK+G    A  L  S+ +G    DVV Y 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +IH+LC D +  +A +LF +M  KG++P+ V  N+L+       E   V  LL+ M
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 9/168 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL   ++    +P++  Y+ +I+G+CR G    A +LF  + +         KP+  
Sbjct: 442 KAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG------LKPNVW 495

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +  GLCK G +D+A +L ++M +   + D  TYN++ +GF   N+++ A +L  EM
Sbjct: 496 TYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM---IQIGVRPNAF 166
           + +G   +V T ++++  L  +G  +  +  LE M   ++I V+   F
Sbjct: 556 LARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVF 603


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  308 bits (789), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/403 (39%), Positives = 244/403 (60%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  + A GC+P+V TY+T+INGLC+ G T  A  L ++M    GE G  C+PD V
Sbjct: 179 QALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM----GEVG--CQPDVV 232

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID LCK+  V++A ++   MK K I+P VV+Y S+I+G C  +   EA  +  EM
Sbjct: 233 TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM 292

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++VTFS+++D  CK G + EA  +L+ M ++GV PN   YN+LM G+ L   V
Sbjct: 293 TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEV 352

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M + GCK +VFSYSILINGYC  K I+ A  L++EM+ +G+ P  V+Y TL
Sbjct: 353 VEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++ ++  A +LF +M  +G   D   Y   ++G CK GY+ +A  LFR ++    
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LID +CKSG L  A +LF  L    L  DV  Y  +I+ LC +G +D+A +
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  ME  G  P+  ++N ++ G +++ + S+ V+L+  M ++
Sbjct: 533 AFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 189/386 (48%), Gaps = 5/386 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P +I ++ L++ + R      A+    + +   G       P+      +I+  C    V
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAG-----LSPNTCTLNILINCFCLMQHV 142

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D    +L ++    + P ++T+ ++I G C A +  +A  LF +M+ +G QP+V T++ I
Sbjct: 143 DLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTI 202

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LCK G+   A+ L++ M ++G +P+   Y+TL+D  C    VN A ++F  M++ G 
Sbjct: 203 INGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGI 262

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              V SY+ LI G C     + A ++ +EM S  I P +VT++ L     +   V  A  
Sbjct: 263 SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQG 322

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +   M   GV  +   Y + + G      +VEA +LF  +    C+ D+ SYS LI+G C
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
              R+  A +LF+ +    L  + V+Y  +IHA C  GK+ +A +LF DM   G  PD  
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMD 402
            ++ L+ G  +     K   L   M 
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQ 468



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 142/269 (52%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G EPNVITY++L++G       + A  LF+ MI         CKPD 
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG------CKPDV 371

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+ +I+G C    +D+AK+L  +M  + + P+ V+Y ++I  FC      EA+ LF +
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKD 431

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P++ T+SV+++  CK G + +A +L   M    ++PN  +Y  L+D  C +G 
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A++LF  +   G + +V  Y+ +ING CK   ++ AL  + +M   G  P   +YN 
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G  +     RA +L  EM+  G  AD
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 97/189 (51%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +  +SL  +M   G+ P   T N L      +  V+  F +  ++ + G+      + T 
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+GLCK G   +ALELF  +    C+ D+ +Y+ +I+GLCK G    A  L   +     
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             DVVTY+ +I +LC D  +++A D+F  M+AKG++P  V++ +L+ G    +   +   
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 397 LLHRMDERN 405
           +L+ M   N
Sbjct: 288 MLNEMTSLN 296


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  308 bits (788), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 156/403 (38%), Positives = 245/403 (60%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  + A GC+P+V TY+T+INGLC+ G T  A  L ++M          C+P+ V
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG------CQPNMV 234

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID LC++  V++A ++   MK K I+PD+ TY S+I+G C  +   EA  L  EM
Sbjct: 235 TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM 294

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++VTF+V++D  CK GK+ EA  +L+ M ++GV PN   Y++LM G+ L   V
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDV 354

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M + GCK N+FSY+ILINGYCK K I+ A+ L++EM+ +G+ P  V+YNTL
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++  A  LF  M  +G   D + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL 474

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ L+  +CKSG  K A +LF  L    L   V  Y  +I+ LC +G +D+A +
Sbjct: 475 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +MEA G  PD +++N ++ G +++ + S+ + L+  M +R
Sbjct: 535 AFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDR 577



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 198/390 (50%), Gaps = 11/390 (2%)

Query: 17  PNVITYSTLINGLCRTGH---TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           P +I ++ L++ + + G     +++L+   E++           P+    +  ++  C+ 
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVG--------LSPNIYTLSIFMNCFCQL 141

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD    +L ++    + P +VT+ ++I G C   +  +A  LF +M+ +G QP+V T+
Sbjct: 142 QRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTY 201

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I++ LCK G+   A+ LL+ M + G +PN   Y+TL+D  C    VN A ++F  M++
Sbjct: 202 NTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKA 261

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   ++F+Y+ LI G CK    + A +L +EM S  I P +VT+N L     +  +V  
Sbjct: 262 KGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSE 321

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M   GV  +   Y + + G      +VEA +LF  +    C+ +I SY+ LI+
Sbjct: 322 ALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILIN 381

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK+ R+  A +LF+ +    L  + V+YN +IH  C  GK+ +A DLF +M   G  P
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D   ++ L+ G  +     K   L   M  
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 170/340 (50%), Gaps = 41/340 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+ +KA G  P++ TY++LI GLC+      A  L  EM + N        PD V
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN------IMPDIV 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++D  CKEG V +A  +L  M +  + P+VVTY+S++ G+    D  EA++LF  M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL---------- 171
           + +G +PN+ +++++++  CK  +++EA QL   MI  G+ PN   YNTL          
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 172 -------------------------MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                    +DGFC  G + +A  LF +M+S   K N+  Y+IL
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK+   + A  L+SE+  +G++P V  Y T+  GL +   ++ A + F  M+  G 
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGC 544

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
             D  +Y   I GL ++     AL L   +R      D+R
Sbjct: 545 PPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 130/230 (56%), Gaps = 6/230 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  +   GC+PN+ +Y+ LING C+      A+ LF EMI+          P+ 
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG------LTPNN 408

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G C+ G + +A++L   M      PD+ TY+ ++ GFC      +A RLF  
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++PN+V +++++  +CK+G  ++A +L   +   G++P+  +Y T+++G C  G 
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ A E F +ME+ GC  +  SY+++I G  ++K+   AL L  EM  +G
Sbjct: 529 LDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 35/216 (16%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            ME +G   N+++ SI +N +C+ + ++   S+ ++++  G++PT+VT            
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVT------------ 165

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
                                  + T I+GLCK G   +A+ELF  +    C+ D+ +Y+
Sbjct: 166 -----------------------FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +I+GLCK G    A  L   +       ++VTY+ +I +LC D  +++A D+F  M+AK
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G++PD   + +L+ G  + +   +   LL+ M   N
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 1/154 (0%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG-YIVEALELFRTLRILKCELDIRSYS 309
           ++ A   F+ M           +   +  + K G Y    + L + + ++    +I + S
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
             ++  C+  R+ + + +   + +  L   +VT+  +I+ LC  G+  +A +LF DM AK
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           G  PD   +NT++ G  +  ET+    LL +M+E
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEE 226


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 158/406 (38%), Positives = 245/406 (60%), Gaps = 6/406 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  ++  GC P+ I Y TL+ GLC+TG+   AL L +EM+N  G +G+ CKP  +
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+   D+A+EL  +MK + I PDV++Y ++I GFC +    +AK LF EM
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V T SV++D LCK GK+ EA++LLE++IQ G  P+     TL+ G C+  R+
Sbjct: 364 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI 423

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPTV 235
           ++A +LF+ M+ +GC  NV + + L+ G C++  I+ AL L+  MLS     GI  KP  
Sbjct: 424 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 483

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++Y+ +  GL +  + + A +LF EM+  GV  D  +Y + I G C++G   +A  LF  
Sbjct: 484 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+ ++S LID LCK G++  A EL   + +   I + VTY  ++  LC + +
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +A  LF+ M+  G  PD V + TLM G  +       +EL  +M
Sbjct: 604 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 649



 Score =  297 bits (761), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 242/406 (59%), Gaps = 6/406 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  +K  GC P+ I Y TL+ GLC+TG   +AL+L +EM+N   ++G+ CKP  V
Sbjct: 63  EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+   D+A+EL  +MK + + PDV++Y S+I GFC +    +AK LF EM
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G++ +V T S+++D LCK GK+ EA++LLE+MIQ G   +   Y+TL+ G C+  R+
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPTV 235
           + A  LF+SM+ +GC+ +  +Y  L+ G C+   I  AL L+ EML+     GI  KPT+
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++Y+ +  GL +  + + A +LF EM+  G+  D  +Y T I G C +G   +A  LF  
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+ + S LID LCK G++  A +L   + +   I DVVT   ++  LC   +
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + KA  LFL M+  G  P+ V   TLM G  ++      +EL   M
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468



 Score =  273 bits (699), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 212/336 (63%), Gaps = 8/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K++  GC PNV+T +TL+ GLC++G+  +AL L + M++    +G+ CKP+A+
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK G  D+A+EL  +MK   + PDV++Y S+I GFC +    +AK LF EM
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D GVQP+V TFSV++D LCK GK+ EA++LLE+MIQ G  PN   Y TL+ G C+  R+
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------KGIKPTV 235
           + A +LF+ M+ +GC  +V +Y  L+ G C+   I+ AL L+ +MLS         KP V
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++Y+ +  GL +  + + A +LF EM+  GV  +  +Y + I G C++G + +A  LF  
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +     +L+  +YS +I G CK G++  A  LF  +
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758



 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 144/412 (34%), Positives = 239/412 (58%), Gaps = 18/412 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++KA G  P+VI+Y+TLI+G C +G    A  LF EM++      V  +PD  
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD------VGIQPDVT 373

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID LCK+G V +A +LL  +  +   PDVVT  ++++G C  +  ++A +LF++M
Sbjct: 374 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRPNAFVYNTLMDGF 175
              G  PNVVT + +M  LC++G ++ A +L + M+       I  +PNA  Y+ ++DG 
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  GR + A+ELF  M+++G   +V SY+ LI+G+C++ + + A  L++EM+  G++P V
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T++ L   L +  +V  A +L + M + G   +T  Y T + GLC N  I EA +LF  
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV------LIADVVTYNIMIHA 349
           ++ L C  D+ +Y  L+ GLC++G +K A EL   +             DV++Y+I+I  
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC  G+ D+A +LF +M+A GV P+ +++ +L+ G  R+ +      L + M
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725



 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/450 (34%), Positives = 230/450 (51%), Gaps = 53/450 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++KA G  P+VI+Y++LI+G CR+G    A  LF EM++      V  + D  
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD------VGIRSDVT 192

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID LCKEG V +A ELL  M  +    D+VTY+++I+G C  +  +EA RLF+ M
Sbjct: 193 TSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSM 252

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRPNAFVYNTLMDGF 175
              G +P+ + +  +M  LC+ G +  A QL + M+       I  +P    Y+ ++DG 
Sbjct: 253 QKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 312

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   R + A+ELF  M++ G   +V SY+ LI+G+C + + E A  L++EML  GI+P V
Sbjct: 313 CKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 372

Query: 236 -----------------------------------VTYNTLFIGLFEIHQVERAFKLFDE 260
                                              VT  TL  GL   H++ +A +LF +
Sbjct: 373 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLK 432

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI------LKCELDIRSYSCLIDG 314
           MQ+ G   +     T + GLC++G I  ALEL + +        + C+ +  SYS +IDG
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR   A ELF  +    +I DV++Y  +IH  C  GK   A  LF +M   GV PD
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              F+ L+    +  +  +  ELL  M +R
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQR 582



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 204/381 (53%), Gaps = 18/381 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V T   LI+  C+ G  I A  L E M+         C  D V Y+T+I GLC +
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRG------CILDIVTYSTLIKGLCMK 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ------ 127
             + +A +L + MK     PD + Y ++++G C     N A  L  EM++   Q      
Sbjct: 59  HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +V++S+I+D LCK+ + +EA +L + M   G+ P+   Y +L+ GFC +G+  +AK L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M  +G + +V + S+LI+  CK  ++  A  L   M+ +G    +VTY+TL  GL  
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------RILKC 301
            H++  A +LF  MQ+ G   D  AY T + GLC+ G I  AL+L + +        +KC
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + SYS +IDGLCK  R   A ELF  +    ++ DV++Y  +IH  C  GK +KA  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           LF +M   G+ PD    + L+
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLI 379



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 204/380 (53%), Gaps = 20/380 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   GC P+V+T +TL+ GLC       A  LF +M     + G  C P+ 
Sbjct: 389 IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM----QKLG--CMPNV 442

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK------NINPDVVTYNSVIRGFCYANDSNEA 114
           V   T++ GLC+ G +  A EL   M         N  P+ ++Y+ +I G C     +EA
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + LF EM   GV P+V++++ ++   C++GK ++A  L   M+ IGV+P+   ++ L+D 
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  G+V  A EL   M   GC  N  +Y+ L+ G C N  I  A  L+ +M   G  P 
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEM----QRHGV--AADTWAYRTFIDGLCKNGYIVE 288
           VVTY TL  GL +   ++ A +L  +M     ++G     D  +Y   IDGLCK+G   E
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A ELF+ ++ L    ++ SY+ LI G C+SG+L+ A  LF+ +    +  + VTY++MIH
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742

Query: 349 ALCADGKMDKAHDLFLDMEA 368
             C +G++DKA  LF  MEA
Sbjct: 743 GFCKEGQIDKA--LFQKMEA 760



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 167/287 (58%), Gaps = 6/287 (2%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+QP+V T  V++D  CK GK+ EA++LLE+M+Q G   +   Y+TL+ G C+  R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPT 234
           ++ A +LF+SM+ +GC+ +  +Y  L+ G C+  +I  AL L+ EML+     GI  KPT
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +V+Y+ +  GL +  + + A +LF EM+  G+  D  +Y + I G C++G   +A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +    D+ + S LID LCK G++  A EL   + +   I D+VTY+ +I  LC   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++ +A  LF+ M+  G  PD +A+ TLM G  +    +  ++L   M
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 172/341 (50%), Gaps = 47/341 (13%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I PDV T   +I  FC      EA  L   M+ +G   ++VT+S ++  LC   ++ EA+
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF------VSMESMGCKHNVFSYS 204
           QL   M ++G RP+A  Y TLM G C TG++N A  L        S   + CK  + SYS
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+I+G CK++  + A  L+ EM ++G+ P V++Y +L  G     + E+A  LF+EM   
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+ +D       ID LCK G ++EA EL   +    C LDI +YS LI GLC   R+  A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 325 WELFHSLPR----------GVLI-------------------------------ADVVTY 343
             LF S+ +          G L+                                 +++Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +I+I  LC D + D+A +LF +M+A+G+ PD +++ TL+ G
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +G++P+      L+D FC  G+V  A EL   M   GC  ++ +YS LI G C    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM----QRHGVAADTW 271
           I  A  L+  M   G +P  + Y TL  GL +  ++  A  L  EM     ++G+     
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 272 --AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
             +Y   IDGLCK+    EA ELF+ ++      D+ SY+ LI G C+SG+ + A  LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    + +DV T +++I  LC +GK+ +A++L   M  +G   D V ++TL+ G    +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 390 ETSKVVELLHRMDE 403
             S+   L   M +
Sbjct: 241 RISEATRLFMSMQK 254



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 6/220 (2%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M  +G + +V +  +LI+ +CK  ++  A  L   M+ +G    +VTY+TL  GL   H+
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------RILKCELD 304
           +  A +LF  M++ G   D  AY T + GLC+ G I  AL L + +        +KC+  
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + SYS +IDGLCK  R   A ELF  +    ++ DV++Y  +IH  C  GK +KA  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M   G+  D    + L+    +  +  +  ELL  M +R
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  307 bits (786), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 161/400 (40%), Positives = 234/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K    G +P+V+TY TL+NGLC+ G+T  A+ L   M+  N      C+P+ +
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVI 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V +A  L  +M  K I+PD+ TYNS+I   C   +      L  EM
Sbjct: 292 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV FS ++D LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   +
Sbjct: 352 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+    VTYNTL
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI  Y+  IDG+C++G L+ A +LF +L    L  DV TYNIMIH LC  G +D+A+ 
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M+  G + D   +NT++ G +R+NET    +LL  M
Sbjct: 592 LFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P+ + ++ L+  + +  H    L+L  +M      FG+   PD  
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L ++      PD  T+N++IRG C      EA  LF + 
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VVT+  +M+ LCK G    A +LL  M+Q   RPN   YNT++D  C   +V
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++F+Y+ LI+  C   E +   +L +EM++  I P VV ++T+
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   +  A  + D M + GV  D   Y   +DG C    + EA+++F T+    C
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++RSY+ LI+G C+  R+  A  L   +    LIAD VTYN +IH LC  G++  A  
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A G  PD V +  L+    +N+  ++ + LL  ++  N
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++   G  P++ TY++LI+ LC          L  EM+N          P+ V
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVV 361

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +++T++D LCKEG +  A +++  M  + + PDVVTY +++ G C  ++ +EA ++F  M
Sbjct: 362 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 421

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV +++++++  C+  +M++A  LLE M   G+  +   YNTL+ G C  GR+
Sbjct: 422 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 481

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y IL++  CKN  +  A+ L   +    +   ++ YN  
Sbjct: 482 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 541

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF  +   G+  D   Y   I GLCK G + EA +LFR +    C
Sbjct: 542 IDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+ +I G  +S     A +L   +      ADV T  +++  L  DG +D++  
Sbjct: 602 SRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQS-- 658

Query: 362 LFLDMEAKGVAPD 374
            F  +  +GV  +
Sbjct: 659 -FERLRLRGVGEE 670



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 159/361 (44%), Gaps = 35/361 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   +  P  V +  ++         +    L  +M   G+ P+V T ++
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   ++  A  +L  ++++G +P+   +NTL+ G C+ G++  A  LF      G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +V +Y  L+NG CK      A+ L   M+ K  +P V+ YNT+   L +  QV  AF
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 256 KLFDEMQRHGVAADTWAY-----------------------------------RTFIDGL 280
            LF EM   G++ D + Y                                    T +D L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G I  A ++   +     E D+ +Y+ L+DG C    +  A ++F ++     + +V
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +YNI+I+  C   +MDKA  L   M  +G+  D V +NTL+ G          + L H 
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 401 M 401
           M
Sbjct: 491 M 491



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 152/301 (50%), Gaps = 10/301 (3%)

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRP 163
           + N  ++A   F  M+     P+ V F+ ++  +    KM+  S +L L  Q+   G+ P
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPP 183

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + +  N L++ FC   R+  A  +   +  +GC+ +  +++ LI G C   +I  AL L+
Sbjct: 184 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 243

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            + + +G +P VVTY TL  GL ++     A +L   M +     +  AY T ID LCK+
Sbjct: 244 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + EA  LF  +       DI +Y+ LI  LC     K    L + +    ++ +VV +
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVE-LLH 399
           + ++ ALC +G +  AHD+   M  +GV PD V +  LM G C+R+  +E  KV + ++H
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423

Query: 400 R 400
           +
Sbjct: 424 K 424



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 35/190 (18%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ ML     P+ V +  L   + ++        L  +M   G+  D +    
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY---- 186

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
                              TL IL            I+  C   RL  A+ +   L +  
Sbjct: 187 -------------------TLNIL------------INSFCHLRRLGYAFSVLAKLLKLG 215

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              D  T+N +I  LC +GK+ +A  LF     +G  PD V + TLM G  +   TS  +
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275

Query: 396 ELLHRMDERN 405
            LL  M ++N
Sbjct: 276 RLLRSMVQKN 285


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  307 bits (786), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 161/401 (40%), Positives = 245/401 (61%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  LF ++   G EP+VITYST+INGLC+ G+T +AL L ++M     E G  CKP+ 
Sbjct: 27  MDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM----EEKG--CKPNV 80

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y TIID LCK+  V +A +   +M  + I PDV TY+S++ GFC     NEA  LF +
Sbjct: 81  VAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQ 140

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ V PN VTF++++D LCK   + EA  + E M + G+ P+ + YN L+DG+C   +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A++LF  M+  GC  NV SY+ILING+CK+  I+ A  L +EM  K + P + TY+T
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ + + A +L  EM  +G+  +   Y   +DGLCK+G++ EA EL + ++  K
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E +I  Y+ LI+G+C  G+L+ A ELF +L    +   VVTY +MI  L   G  ++A 
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +LF +M   G  P+   +N ++ G +RN +T   V L+  M
Sbjct: 381 ELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 183/333 (54%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F +  +P  V + T++ GLC +  +  A +L  +M      PDV+TY+++I G C   ++
Sbjct: 2   FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A +L  +M ++G +PNVV ++ I+D LCK+  + EA      M++ G+ P+ F Y+++
Sbjct: 62  TMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + GFC  GRVN A  LF  M       N  +++ILI+G CK + I  A  ++  M  KG+
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P V TYN L  G     Q++ A KLF+ M R G A +  +Y   I+G CK+G I EA  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +       DI +YS L+ G C+ GR + A EL   +    L+ +++TY+I++  LC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             G +D+A +L   M+   + P+   +  L+ G
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEG 334



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 169/313 (53%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P +VT+N+++ G C      +A +LF EM+  G +P+V+T+S I++ LCK G    A 
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           QLL+ M + G +PN   YNT++D  C    V  A + F  M   G   +VF+YS +++G+
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C    +  A SL+ +M+ + + P  VT+  L  GL +   +  A+ +F+ M   G+  D 
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           + Y   +DG C    + EA +LF  +    C  ++RSY+ LI+G CKSGR+  A  L   
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L  D+ TY+ ++   C  G+  +A +L  +M + G+ P+ + ++ ++ G  ++  
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305

Query: 391 TSKVVELLHRMDE 403
             +  ELL  M E
Sbjct: 306 LDEAFELLKAMQE 318



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 155/281 (55%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+QP +VTF+ ++  LC   K+ +A +L + M+++G  P+   Y+T+++G C  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +L   ME  GCK NV +Y+ +I+  CK++ +  A+  +SEM+ +GI P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G   + +V  A  LF +M    V  +   +   IDGLCK   I EA  +F T+    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E D+ +Y+ L+DG C   ++  A +LF+ + R     +V +YNI+I+  C  G++D+A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  K + PD   ++TLM G  +     +  ELL  M
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 151/277 (54%), Gaps = 6/277 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   G EP+V TY+ L++G C       A  LF  M          C P+  
Sbjct: 168 EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG------CAPNVR 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK G +D+AK LL +M  K++ PD+ TY++++RGFC      EA+ L  EM
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN++T+S+++D LCK+G ++EA +LL+ M +  + PN F+Y  L++G C  G++
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ELF ++   G +  V +Y+++I+G  K      A  L+ EM   G  P   TYN +
Sbjct: 342 EAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVI 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G         A +L +EM   G +AD+  +R   D
Sbjct: 402 IQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 131/250 (52%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M ++G++P    +NTL+ G C   ++  A +LF  M  MG + +V +YS +ING CK   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL L  +M  KG KP VV YNT+   L +   V  A   F EM + G+  D + Y +
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            + G C  G + EA  LF+ +       +  +++ LIDGLCK   +  AW +F ++    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L  DV TYN ++   C+  +MD+A  LF  M+ KG AP+  ++N L+ G  ++    +  
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 396 ELLHRMDERN 405
            LL  M  ++
Sbjct: 241 GLLAEMSHKS 250


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  306 bits (785), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 161/403 (39%), Positives = 234/403 (58%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PN +TY TLI+GLC+ G++  A+ L   M+  N      C+P+ +
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN------CEPNVI 215

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID L K+  V++A  +  +M  K I+P+V TYNS+I G C  ++      L  EM
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + PNVV F+ ++D LCK G +  A  ++++MIQ GV P+   Y  LMDG CL   +
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   GC  NV SYS LINGYCK + I+ A+ L+ EM  + + P +VTYNTL
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++  A  LF EM   G   D   YR  +D LCK  ++ +A+ + + +     
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI+SY+ +IDG+C+ G L+ A +LF SL    L  DV TY IMI+ LC  G + +A  
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M   G +PD   +N +  G +RNNET   ++LL  M  R
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR 558



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 190/353 (53%), Gaps = 6/353 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+++ A G  PNV TY+++I+GLC+         L  EM++          P+ V
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK------IMPNVV 285

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+TT++D LCKEG V  A +++  M  + + PDVVTY +++ G C  ++ +EA ++F  M
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM 345

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV+++S +++  CK  ++++A  L E M Q  + PN   YNTL+ G C  GR+
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y IL++  CK + ++ A+++   +    + P + +YN +
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+  + ++E A  LF  +   G+  D W Y   I+GLC  G + EA +LFR +    C
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             D  +Y+ +  G  ++     A +L   +      AD  T  +++  L  DG
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F ++      P+V+ ++ ++  +    H    L+L ++M       G+    D  
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM----DSLGI--PSDVY 110

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    VD    +L ++      PD  T+ ++IRG C      EA  LF +M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPN VT+  ++  LCK G    A +LL  M+Q    PN   YNT++D      +V
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  +F  M + G   NV +Y+ +I+G CK  E +   +L +EM+   I P VV + TL
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  A  + D M + GV  D   Y   +DG C    + EA ++F T+    C
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SYS LI+G CK  R+  A  LF  + +  L+ ++VTYN +IH LC  G++  A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A G  PD V +  L+    +     + + +L  ++  N
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 158/329 (48%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A     +M      P VV +  ++         +    L  +M   G+  +V T ++
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   +++    +L  + ++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + N  +Y  LI+G CK      A+ L   M+ K  +P V+TYNT+   LF+  QV  A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +F EM   G++ +   Y + I GLCK         L   +   K   ++  ++ L+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G + IA ++   + +  +  DVVTY  ++   C   +MD+A  +F  M  KG AP+ 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++++TL+ G  +     K + L   M +R
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQR 383



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 3/295 (1%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  +EA   F  M+     P+VV F+ I+  +           L + M  +G+  + +  
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             +++ FC   RV+    +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P  VTY TL  GL ++     A +L   M +     +   Y T ID L K+  + E
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL +F  +       ++ +Y+ +I GLCK    K    L + +    ++ +VV +  ++ 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
           ALC +G +  AHD+   M  +GV PD V +  LM G C+R+  +E  KV + + R
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+   ++     P++ +Y+ +I+G+CR G    A +LF  + +          PD  
Sbjct: 442 QAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG------LHPDVW 495

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC +G + +A +L  +M     +PD  TYN + RGF   N++  A +L  EM
Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +  T ++I++ L  +G  +   Q+L   +Q
Sbjct: 556 LGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 158/403 (39%), Positives = 246/403 (61%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  + A GC P+V TY+T+INGLC+ G T  A  L ++M     E G  C+P+ V
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM----EEAG--CQPNVV 239

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID   K+  V++A ++   MK K I+PD+ TYNS+I+G C  +   EA  L  EM
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++VTF+V++D +CK GK+ EA  +L+ M ++GV P+   Y++LM G+ L   V
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF +M + GCK +VFSY+ILINGYCK K I+ A  L++EM+ +G+ P  V+YNTL
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  +  A  LF  M  +G   + + Y   +DG CK GY  +A  LFR ++    
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LID +CKSG L+ A +LF  L    L  +   Y  +I+ LC +G +D+A +
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +ME  G  PD +++N ++ G + + + S+ V+L+  M ++
Sbjct: 540 AFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 180/328 (54%), Gaps = 1/328 (0%)

Query: 58  PDAVIYTTIIDGLCKEG-FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           P  + +T ++  + K G + D    L  QM+   ++P++ T + +I  F +    + A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G+QP +VTF+ +++ LCK GK  +A +L + M+  G RP+ + Y T+++G C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G    A  L   ME  GC+ NV +YS +I+ + K++ +  AL ++S M  KGI P + 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN+L  GL    Q + A  L +EM+   +  D   +   +D +CK G + EA  + +T+
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  E D+ +YS L+ G      +  A +LF ++       DV +YNI+I+  C   ++
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           D+A  LF +M  +G+ P+ V++NTL+ G
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHG 422



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 131/237 (55%), Gaps = 6/237 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  +   GC+P+V +Y+ LING C+      A  LF EMI+          P+ 
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG------LTPNN 413

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLC+ G + +A+ L   M      P++ TY+ ++ GFC      +A RLF  
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     +PN+V +++++D +CK+G + +A +L   +   G++PNA +Y T+++G C  G 
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           ++ A E F +ME  GC  +  SY+++I G+  +K+   A+ L  EM  KG    V T
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 36/300 (12%)

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV-NRAKELFVSMESMGC 196
           D+ C    +++A      M+     P    +  L+      G+  +    L   ME  G 
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N+++ SILIN +   + ++ A S+ ++++  G++PT+VT+ TL   L ++ +  +A +
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNG-------------------------------- 284
           LFD+M   G   D + Y T I+GLCK G                                
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 285 ---YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
               + EAL++F  +++     DI +Y+ LI GLC   + K A  L + +    ++ D+V
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           T+N+++  +C +GK+ +A  +   M   GV PD V +++LM G    +E  +  +L   M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 240/400 (60%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E       D V
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTTIID LC    V+ A  L  +M +K I P+VVTYNS+IR  C     ++A RL  +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTFS ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+    VTYNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +AL +F  L+  K 
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  260 bits (664), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 223/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++     +PN +T++TLI+GL        A+ L + M+         C+PD  
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG------CQPDLF 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK G +D A  LL +M+   I  DVV Y ++I   C   + N+A  LF EM
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PNVVT++ ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ + + T++ G  R     +   L   M E
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ +Y+ LIN  CR     +AL +  +M+    E      PD V  +++++G C    + 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE------PDIVTLSSLLNGYCHGKRIS 167

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L+ QM      P+ VT+N++I G    N ++EA  L   M+ +G QP++ T+  ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK G ++ A  LL+ M +  +  +  +Y T++D  C    VN A  LF  M++ G +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI   C       A  L S+M+ + I P VVT++ L     +  ++  A KL
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           +DEM +  +  D + Y + I+G C +  + EA  +F  +    C  ++ +Y+ LI G CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R++   ELF  + +  L+ + VTYN +I  L   G  D A  +F  M + GV PD + 
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 378 FNTLMLGCIRNNETSKVV 395
           ++ L+ G  +  +  K +
Sbjct: 468 YSILLDGLCKYGKLEKAL 485



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 201/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      P+++ ++ L++ + +     + ++L E M N    +      D  
Sbjct: 63  DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLY 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  C+   +  A  +L +M      PD+VT +S++ G+C+    +EA  L  +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                QPN VTF+ ++  L  + K  EA  L++ M+  G +P+ F Y T+++G C  G +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ME    + +V  Y+ +I+  C  K +  AL+L++EM +KGI+P VVTYN+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +   A +L  +M    +  +   +   ID   K G +VEA +L+  +     
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +YS LI+G C   RL  A  +F  +       +VVTYN +I   C   ++++  +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  +G+  + V +NTL+ G  +  +     ++  +M
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T+S LI+   + G  + A  L++EMI  +        PD  
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIF 361

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+G C    +D+AK +   M  K+  P+VVTYN++I+GFC A    E   LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++  L + G  + A ++ + M+  GV P+   Y+ L+DG C  G++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    + ++++Y+I+I G CK  ++E    L+  +  KG+KP V+ Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       E A  LF EM+  G   ++  Y T I    ++G    + EL + +R    
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
             D  + S +I+ L   GRL+ ++
Sbjct: 602 VGDASTISMVINML-HDGRLEKSY 624



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 156/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  EL  +M  + +  + VTYN++I+G   A D + A+++F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LCK GK+E+A  + E + +  + P+ + YN +++G C  G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P   TYNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF EM+           P  V +  ++  + K    D    L  +M++  I+ D+ +
Sbjct: 64  AVDLFGEMVQSRP------LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN +I  FC  +    A  +  +MM  G +P++VT S +++  C   ++ EA  L++ M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +  +PN   +NTL+ G  L  + + A  L   M + GC+ ++F+Y  ++NG CK  +I+
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+  VV Y T+   L     V  A  LF EM   G+  +   Y + I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +I+  C   ++D+A  +F  M +K   P+ V +NTL+ G  +     + +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 398 LHRMDER 404
              M +R
Sbjct: 418 FREMSQR 424



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 147/294 (50%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+ ++  + K  K +    L E M  + +  + + YN L
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M     
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P  VT+NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  AL 
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y+ +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V F+ L+   ++  +  +  +L   M +R+
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 133/260 (51%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+++A  L   M+Q    P+   +N L+       + +    L   M+++   ++++SY+
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A  L D+M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
               +T  + T I GL  +    EA+ L   +    C+ D+ +Y  +++GLCK G + +A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +G + ADVV Y  +I ALC    ++ A +LF +M+ KG+ P+ V +N+L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 385 CIRNNETSKVVELLHRMDER 404
                  S    LL  M ER
Sbjct: 300 LCNYGRWSDASRLLSDMIER 319


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/406 (38%), Positives = 246/406 (60%), Gaps = 6/406 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  ++  GC P+ ITY TL+ GLC+TG+  +AL L +EM+N  G +G+ CKP  +
Sbjct: 400 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 459

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+   D+A+EL  +MK + I PDV++Y ++I GFC +    +AK LF EM
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V T SV++D LCK GK+ EA++LLE++IQ G   +     TL+ G C+  R+
Sbjct: 520 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPTV 235
           ++A +LF+ M+ +GC  NV + + L+ G C++  I+ AL L+  MLS     GI  KP  
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 639

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++Y+ +  GL +  + + A +LF EM+  GV  D  +Y + I G C++G   +A  LF  
Sbjct: 640 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+ ++S LID LCK G++  A EL   + +   I + VTY  ++  LC + +
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +A  LF+ M+  G  PD V + TLM G  +       +EL  +M
Sbjct: 760 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 805



 Score =  300 bits (768), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 240/396 (60%), Gaps = 13/396 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  ++  GC P+ ITY TL+ GLC+TG+  +AL L +EM+N  G +G+ CKP  +
Sbjct: 107 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 166

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+   D+A+EL  +MK + + PDV++Y S+I GFC++    +AK LF EM
Sbjct: 167 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V T  V++D  CK GK+ EA++LLE+M+  G   +   Y+TL+ G C+  R+
Sbjct: 227 LDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRI 286

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-------KGIKPT 234
           + A +LF+SM+ +GC+ +  +Y  L+ G C+  +I  AL L+ EML+       K I+P 
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V T + L   L +  +V  A +L + M + G   D   Y T I GLC    I EA  LF 
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV------LIADVVTYNIMIH 348
           +++ L C  D  +Y  L+ GLC++G + IA +L   +              +++Y+I+I 
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            LC D + D+A +LF +M+A+G+ PD +++ TL+ G
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502



 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 212/336 (63%), Gaps = 8/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K++  GC PNV+T +TL+ GLC++G+  +AL L + M++    +G+ CKP+A+
Sbjct: 581 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 640

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK G  D+A+EL  +MK   + PDV++Y S+I GFC +    +AK LF EM
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D GVQP+V TFSV++D LCK GK+ EA++LLE+MIQ G  PN   Y TL+ G C+  R+
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------KGIKPTV 235
           + A +LF+ M+ +GC  +V +Y  L+ G C+   I+ AL L+ +MLS         KP V
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++Y+ +  GL +  + + A +LF EM+  GV  +  +Y + I G C++G + +A  LF  
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +     +L+  +YS +I G CK G++  A  LF  +
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914



 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/451 (34%), Positives = 234/451 (51%), Gaps = 48/451 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC-KPDA 60
           EA  LF  +K  GC P+ I Y TL+ GLC+TG   +AL+L +EM+N   ++G+ C +PD 
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +ID LCKEG V +A ELL  M  +    D+VTY+++I+G C  +  +EA  LF+ 
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRPNAFVYNTLMDG 174
           M   G +P+ +T+  +M  LC+ G +  A QL + M+       I  +P    Y+ ++DG
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C   R + A+ELF  M++ G   +V SY+ LI+G+C + + E A  L++EML  GI+P 
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 235 V-----------------------------------VTYNTLFIGLFEIHQVERAFKLFD 259
           V                                   VT  TL  GL   H++ +A +LF 
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI------LKCELDIRSYSCLID 313
           +MQ+ G   +     T + GLC++G I  ALEL + +        + C+ +  SYS +ID
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK GR   A ELF  +    +I DV++Y  +IH  C  GK   A  LF +M   GV P
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D   F+ L+    +  +  +  ELL  M +R
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 237/448 (52%), Gaps = 55/448 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++KA G  P+VI+Y+TLI+G C +G    A  LF EM++      V  +PD  
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD------VGIQPDVT 529

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID LCK+G V +A +LL  +  +    DVVT  ++++G C  +  ++A +LF++M
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKM 589

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRPNAFVYNTLMDGF 175
              G  PNVVT + +M  LC++G ++ A +L + M+       I  +PNA  Y+ ++DG 
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  GR + A+ELF  M+++G   +V SY+ LI+G+C++ + + A  L++EM+  G++P V
Sbjct: 650 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 709

Query: 236 -----------------------------------VTYNTLFIGLFEIHQVERAFKLFDE 260
                                              VTY TL  GL    ++  A +LF +
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI------LKCELDIRSYSCLIDG 314
           MQ+ G   D   Y T + GLC+ G I  ALEL + +           + D+ SYS +IDG
Sbjct: 770 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR   A ELF  +    +I +V++Y  +IH  C  GK++ A  LF +M  +GV  +
Sbjct: 830 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMD 402
            V ++ ++ G  +  +  K   L  +M+
Sbjct: 890 AVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 236/449 (52%), Gaps = 48/449 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLI---------------------------------- 26
           +EA  L   +   GC  +++TYSTLI                                  
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311

Query: 27  -NGLCRTGHTIVALNLFEEMINGNGEFGVVC-KPDAVIYTTIIDGLCKEGFVDKAKELLL 84
             GLC+TG   +AL+L +EM+N   ++G+ C +PD    + +ID LCKEG V +A ELL 
Sbjct: 312 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLE 371

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            M  +    D+VTY+++I+G C  +  +EA  LF+ M   G +P+ +T+  +M  LC+ G
Sbjct: 372 VMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTG 431

Query: 145 KMEEASQLLELMIQ------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            +  A QL + M+       I  +P    Y+ ++DG C   R + A+ELF  M++ G   
Sbjct: 432 NINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP 491

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V SY+ LI+G+C + + E A  L++EML  GI+P V T + L   L +  +V  A KL 
Sbjct: 492 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           + + + G   D     T + GLC    I +A +LF  ++ L C  ++ + + L+ GLC+S
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611

Query: 319 GRLKIAWELFHSL-----PRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           G +KIA EL  ++     P G+    + ++Y+I+I  LC  G+ D+A +LF +M+A GV 
Sbjct: 612 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 671

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD +++ +L+ G  R+ +      L + M
Sbjct: 672 PDVISYTSLIHGFCRSGKWKDAKYLFNEM 700



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/380 (35%), Positives = 203/380 (53%), Gaps = 20/380 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +   GC  +V+T +TL+ GLC       A  LF +M     + G  C P+ 
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKM----QKLG--CMPNV 598

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK------NINPDVVTYNSVIRGFCYANDSNEA 114
           V   T++ GLC+ G +  A EL   M         N  P+ ++Y+ +I G C     +EA
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 658

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + LF EM   GV P+V++++ ++   C++GK ++A  L   M+ IGV+P+   ++ L+D 
Sbjct: 659 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 718

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  G+V  A EL   M   GC  N  +Y+ L+ G C N  I  A  L+ +M   G  P 
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEM----QRHGV--AADTWAYRTFIDGLCKNGYIVE 288
           VVTY TL  GL +   ++ A +L  +M     ++G     D  +Y   IDGLCK+G   E
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A ELF+ ++ L    ++ SY+ LI G C+SG+L+ A  LF+ +    +  + VTY++MIH
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898

Query: 349 ALCADGKMDKAHDLFLDMEA 368
             C +G++DKA  LF  MEA
Sbjct: 899 GFCKEGQIDKA--LFQKMEA 916



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 217/443 (48%), Gaps = 51/443 (11%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC---KPDAVIYTTI 66
           ++  G  P+  T++ LIN LC        L     ++       +V    +PD    + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ID LCKEG V +A ELL  M  +    D+VTY+++I+G C  +  +EA  LF+ M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRPNAFVYNTLMDGFCLTGR 180
           +P+ +T+  +M  LC+ G +  A QL + M+       I  +P    Y+ ++DG C   R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV----- 235
            + A+ELF  M++ G   +V SY+ LI+G+C + + E A  L++EML  GI+P V     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 236 ------------------------------VTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                         VTY+TL  GL   H++  A +LF  M++ G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTL------RILKC-ELDIRSYSCLIDGLCKS 318
              D  AY T + GLC+ G I  AL L + +        +KC   D+ + S LID LCK 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G++  A EL   + +   I D+VTY+ +I  LC + ++ +A  LF+ M+  G  PD + +
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 379 NTLMLGCIRNNETSKVVELLHRM 401
            TLM G  +    +  ++L   M
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEM 443



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 15/260 (5%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI---------LINGY 210
           G+ P++F +N L++  C   RVN        +   G   ++ +YSI         LI+  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  ++  A  L   M+ +G    +VTY+TL  GL   H++  A  LF  MQ+ G   D 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTL------RILKCELDIRSYSCLIDGLCKSGRLKIA 324
             Y T + GLC+ G I  AL+L + +        +KC+  + SYS +IDGLCK  R   A
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ELF  +    ++ DV++Y  +IH  C  GK +KA  LF +M   G+ PD      L+  
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  +  ELL  M  R
Sbjct: 245 FCKEGKVIEANELLEVMVHR 264


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 240/400 (60%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E       D V
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 240

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTTIID LC    V+ A  L  +M +K I P+VVTYNS+IR  C     ++A RL  +M
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTFS ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 360

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+    VTYNTL
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +AL +F  L+  K 
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 541 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 223/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++     +PN +T++TLI+GL        A+ L + M+         C+PD  
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG------CQPDLF 205

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK G +D A  LL +M+   I  DVV Y ++I   C   + N+A  LF EM
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PNVVT++ ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 266 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 325

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 326 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +     
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   D
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ + + T++ G  R     +   L   M E
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ +Y+ LIN  CR     +AL +  +M+    E      PD V  +++++G C    + 
Sbjct: 98  DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE------PDIVTLSSLLNGYCHGKRIS 151

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L+ QM      P+ VT+N++I G    N ++EA  L   M+ +G QP++ T+  ++
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK G ++ A  LL+ M +  +  +  +Y T++D  C    VN A  LF  M++ G +
Sbjct: 212 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 271

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI   C       A  L S+M+ + I P VVT++ L     +  ++  A KL
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           +DEM +  +  D + Y + I+G C +  + EA  +F  +    C  ++ +Y+ LI G CK
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R++   ELF  + +  L+ + VTYN +I  L   G  D A  +F  M + GV PD + 
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 378 FNTLMLGCIRNNETSKVV 395
           ++ L+ G  +  +  K +
Sbjct: 452 YSILLDGLCKYGKLEKAL 469



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 201/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      P+++ ++ L++ + +     + ++L E M N    +      D  
Sbjct: 47  DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLY 100

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  C+   +  A  +L +M      PD+VT +S++ G+C+    +EA  L  +M
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                QPN VTF+ ++  L  + K  EA  L++ M+  G +P+ F Y T+++G C  G +
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ME    + +V  Y+ +I+  C  K +  AL+L++EM +KGI+P VVTYN+L
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +   A +L  +M    +  +   +   ID   K G +VEA +L+  +     
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +YS LI+G C   RL  A  +F  +       +VVTYN +I   C   ++++  +
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 400

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  +G+  + V +NTL+ G  +  +     ++  +M
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 171/324 (52%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T+S LI+   + G  + A  L++EMI  +        PD  
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIF 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+G C    +D+AK +   M  K+  P+VVTYN++I+GFC A    E   LF EM
Sbjct: 346 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++  L + G  + A ++ + M+  GV P+   Y+ L+DG C  G++
Sbjct: 406 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    + ++++Y+I+I G CK  ++E    L+  +  KG+KP V+ Y T+
Sbjct: 466 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       E A  LF EM+  G   ++  Y T I    ++G    + EL + +R    
Sbjct: 526 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
             D  + S +I+ L   GRL+ ++
Sbjct: 586 VGDASTISMVINML-HDGRLEKSY 608



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 156/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 326 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 379

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  EL  +M  + +  + VTYN++I+G   A D + A+++F +
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LCK GK+E+A  + E + +  + P+ + YN +++G C  G+
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P   TYNT
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 560 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 609



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF EM+           P  V +  ++  + K    D    L  +M++  I+ D+ +
Sbjct: 48  AVDLFGEMVQSRP------LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN +I  FC  +    A  +  +MM  G +P++VT S +++  C   ++ EA  L++ M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +  +PN   +NTL+ G  L  + + A  L   M + GC+ ++F+Y  ++NG CK  +I+
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+  VV Y T+   L     V  A  LF EM   G+  +   Y + I
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +I+  C   ++D+A  +F  M +K   P+ V +NTL+ G  +     + +EL
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 398 LHRMDER 404
              M +R
Sbjct: 402 FREMSQR 408



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 147/294 (50%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+ ++  + K  K +    L E M  + +  + + YN L
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M     
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P  VT+NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  AL 
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y+ +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V F+ L+   ++  +  +  +L   M +R+
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 133/260 (51%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+++A  L   M+Q    P+   +N L+       + +    L   M+++   ++++SY+
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A  L D+M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
               +T  + T I GL  +    EA+ L   +    C+ D+ +Y  +++GLCK G + +A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +G + ADVV Y  +I ALC    ++ A +LF +M+ KG+ P+ V +N+L+  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 385 CIRNNETSKVVELLHRMDER 404
                  S    LL  M ER
Sbjct: 284 LCNYGRWSDASRLLSDMIER 303


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  304 bits (779), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY  +INGLC+ G   +ALNL  +M  G  E       D V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 241

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+ID LCK   VD A  L  +M +K I PDV TY+S+I   C     ++A RL  +M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTF+ ++D   K GK+ EA +L + MIQ  + PN   YN+L++GFC+  R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++F  M S  C  +V +Y+ LING+CK K++   + L+ +M  +G+    VTY TL
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    + A  +F +M   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ + +G+CK+G+++  W+LF SL    +  DV+ YN MI   C  G  ++A+ 
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF+ M+  G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 223/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +P+ +T++TL++GL +      A+ L E M+         C+PD V
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 206

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCK G  D A  LL +M+   I  DVV Y++VI   C     ++A  LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+V T+S ++  LC  G+  +AS+LL  M++  + PN   +N+L+D F   G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M       N+ +Y+ LING+C +  ++ A  +++ M+SK   P VVTYNTL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V    +LF +M R G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+DGLCK+G+L+ A  +F  L +  +  D+ TYNIM   +C  GK++   D
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD +A+NT++ G  +     +   L  +M E
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 203/388 (52%), Gaps = 8/388 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDAVIYTTII 67
           K++  G   N+ TY+ +IN LCR      AL +  +M+  G G       P  V   +++
Sbjct: 90  KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG-------PSIVTLNSLL 142

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           +G C    + +A  L+ QM +    PD VT+ +++ G    N ++EA  L   M+ +G Q
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++VT+  +++ LCK G+ + A  LL  M +  +  +  +Y+T++D  C    V+ A  L
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M++ G + +VF+YS LI+  C       A  L S+ML + I P VVT+N+L     +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             ++  A KLFDEM +  +  +   Y + I+G C +  + EA ++F  +    C  D+ +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LI+G CK+ ++    ELF  + R  L+ + VTY  +IH        D A  +F  M 
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           + GV P+ + +NTL+ G  +N +  K +
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAM 470



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 169/320 (52%), Gaps = 7/320 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T+++LI+   + G  I A  LF+EMI  +        P+ V
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIV 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+G C    +D+A+++   M  K+  PDVVTYN++I GFC A    +   LF +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++    +    + A  + + M+  GV PN   YNTL+DG C  G++
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    + ++++Y+I+  G CK  ++E    L+  +  KG+KP V+ YNT+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    E A+ LF +M+  G   D+  Y T I    ++G    + EL + +R  + 
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586

Query: 302 ELDIRSYSCLIDGLCKSGRL 321
             D  +Y  + D L   GRL
Sbjct: 587 AGDASTYGLVTDML-HDGRL 605



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 149/280 (53%), Gaps = 6/280 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++     +PN++TY++LING C       A  +F  M++ +      C PD 
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 380

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   V    EL   M  + +  + VTY ++I GF  A+D + A+ +F +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P+ + YN + +G C  G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K +V +Y+ +I+G+CK    E A +L+ +M   G  P   TYNT
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L            + +L  EM+    A D   Y    D L
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF EM+           P  V ++ ++  + K    D       +M+   ++ ++ T
Sbjct: 49  AVDLFGEMVKSRPF------PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN +I   C  +  + A  +  +MM  G  P++VT + +++  C   ++ EA  L++ M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+   + TL+ G     + + A  L   M   GC+ ++ +Y  +ING CK  E +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL+L ++M    I+  VV Y+T+   L +   V+ A  LF EM   G+  D + Y + I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ +++ LID   K G+L  A +LF  + +  + 
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++VTYN +I+  C   ++D+A  +F  M +K   PD V +NTL+ G  +  +    +EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 398 LHRMDER 404
              M  R
Sbjct: 403 FRDMSRR 409



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 143/294 (48%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA  LF EM+     P++V FS ++  + K  K +      E M  +GV  N + YN +
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++  C   +++ A  +   M  +G   ++ + + L+NG+C    I  A++L  +M+  G 
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P  VT+ TL  GLF+ ++   A  L + M   G   D   Y   I+GLCK G    AL 
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E D+  YS +ID LCK   +  A  LF  +    +  DV TY+ +I  LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V FN+L+    +  +  +  +L   M +R+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 124 QGVQPNVVTFSVIMDELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +G+  + +++    ++L +N     K++EA  L   M++    P+   ++ L+       
Sbjct: 20  RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + +        ME +G  HN+++Y+I+IN  C+  ++  AL++  +M+  G  P++VT N
Sbjct: 80  KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G    +++  A  L D+M   G   DT  + T + GL ++    EA+ L   + + 
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ D+ +Y  +I+GLCK G   +A  L + + +G + ADVV Y+ +I +LC    +D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
            +LF +M+ KG+ PD   +++L + C+ N    S    LL  M ER
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSL-ISCLCNYGRWSDASRLLSDMLER 304


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  304 bits (779), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 241/401 (60%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF KL +   CEPN + Y T++NGLC+ GHT  A +L   M  G+       KP+ 
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNT 213

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IY+ +ID  CK+G +D A  LL +MK K+I PD+ TY+++I   C  +     + LF+E
Sbjct: 214 CIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + PNV TF+ ++D LCK GK+E+A +++  MI+ GV P+   YN ++DG+ L G+
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+RA+E+F SM +   + N+ SY+ILINGY + K+I+ A+ +  E+  KG+KP++VT N 
Sbjct: 334 VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE+ + + A   FDEM   G   D + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I+ Y+ +IDGLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+   ME  G   D   +N ++ G +R+N+ S++   L  +
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 197/404 (48%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++      P+V+++S L+  L    H    ++LF E+        +       
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREI------HKLRIPVHEF 108

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I + +++  C     D    +L     K I  + V +N+++RG    N   +A  LF ++
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKL 168

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + + +PN V +  +M+ LCK G  ++A  LL LM Q   +PN  +Y+ ++D FC  G 
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGM 228

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+      ++F+YS LI+  CK  + E   +L+ EM+   I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A ++   M   GV  D   Y   IDG    G +  A E+F ++    
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E +I SY+ LI+G  +  ++  A ++   + +  L   +VT N+++H L   G+   A 
Sbjct: 349 IEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + F +M + G  PD     TL+ G  +N    + +   H+++ R
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 160/362 (44%), Gaps = 36/362 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L  QM      P VV+++ +++   +    +    LF E+    +  +    S+
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL------------------------ 171
           +++  C   + +    +L +  + G+  N  ++NTL                        
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 172 ------------MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                       M+G C  G   +A +L   ME    K N   YSI+I+ +CK+  ++GA
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            SL +EM  K I P + TY+TL   L ++ Q E    LF EM    +  +   + + IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LCK G + +A E+ R +     + D+ +Y+ +IDG    G++  A E+F S+    +  +
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +++YNI+I+      K+D+A  +  ++  KG+ P  V  N L+ G      T        
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 400 RM 401
            M
Sbjct: 413 EM 414



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 1/260 (0%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   ++ L+         +    LF  +  +    + F  SI
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++N  C     +   S+ +    KGI    V +NTL  GLF  ++V+ A  LF ++ R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 266 V-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           +   +   Y T ++GLCK G+  +A +L R +     + +   YS +ID  CK G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + + +  +  D+ TY+ +I ALC   + +    LFL+M    + P+   FN+++ G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +     E++  M E+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEK 312



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F KL+    + N+  Y+ +I+GLC+ G    A   FE++        +   PD +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVI 494

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G C+EG +D+AK++L +M+D     D  TYN ++RGF  +N  +E K    E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKM 146
             +       T  ++MD + ++  +
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSL 579



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 29/201 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA  +  ++   G +P+++T + L++GL   G T  A N F+EM++              
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430

Query: 50  -GEF--GVVCKP--------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G F  G+V +               +  IYT +IDGLCK G +DKA     ++    ++
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+TY ++I G+C     +EAK +  +M D G   +  T++VI+    ++ K+ E    
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550

Query: 153 LELMIQIGVRPNAFVYNTLMD 173
           LE +        A     LMD
Sbjct: 551 LEEIAGKSFSFEAATVELLMD 571



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 5/226 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            I V+ N  V N   +  CL    + A  LF  M       +V S+S L+      K   
Sbjct: 34  SISVKGNFGVSNEFENVKCL----DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYS 89

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             +SL+ E+    I       + +      +H+ +  F +     + G+  +   + T +
Sbjct: 90  SVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLL 149

Query: 278 DGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
            GL     + +A+ LF+ L R   CE +   Y  +++GLCK G  + A++L   + +G  
Sbjct: 150 RGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST 209

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             +   Y+I+I A C DG +D A  L  +M+ K + PD   ++TL+
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  303 bits (777), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 155/398 (38%), Positives = 239/398 (60%), Gaps = 7/398 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF KL +   CEP+ + Y T+++GLC+ GHT  A +L   M  G      + KPD 
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQG------ITKPDT 213

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IY  +ID  CK+G +D A  LL +MK KNI PD++TY S+I G    +   + + LF+E
Sbjct: 214 CIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLE 273

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + P+V TF+ ++D LCK GK+E+A +++  MI+ GV PN   YN +MDG+CL G+
Sbjct: 274 MIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQ 333

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + RA+ +F SM   G + ++ SY+ LINGY + K+++ A+ L+ E+   G+KP++VT + 
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE+ + E A   FDEMQ  G   + + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I+ Y+ +I+GLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A 
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+   ME  G  PD   +N ++ G  R+++ S++   L
Sbjct: 514 DMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFL 551



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 198/404 (49%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++      P+ +++S L+  L    H    +++F E+        +    DA 
Sbjct: 55  DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREI------HKLRIPVDAF 108

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +T+++  C     D    +L     K I  + VT+ ++IRG    N   +A  LF ++
Sbjct: 109 ALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + + +P+ V +  +MD LCK G  ++A  LL LM Q   +P+  +YN ++D FC  G 
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM 228

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+      ++ +Y+ LI+G  K  + E   +L+ EM+   I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNS 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A ++   M   GV  +   Y   +DG C  G +  A  +F ++    
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E DI SY+ LI+G  +  ++  A +LF  + +  L   +VT ++++  L   G+ + A 
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             F +M+A G  P+     TL+ G  +N    + +   H+++ R
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P+ V+FS ++  L           +   + ++ +  +AF  +T+
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++  CL  R +    +       G  +N  +++ LI G     +++ A+ L+ +++ + I
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 232 -KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +P  V Y T+  GL +    ++AF L   M++     DT  Y   ID  CK+G +  A 
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L   ++      DI +Y+ LIDGL K  + +    LF  +    +  DV T+N +I  L
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIR 387
           C +GK++ A ++   M  KGV P+ + +N +M G C+R
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A  L   M+     P+A  ++ L+         +    +F  +  +    + F+ S 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++N  C     +   S+ +    KGI    VT+ TL  GLF  ++V+ A  LF ++ R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 266 V-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           +   D   Y T +DGLCK G+  +A +L R +     + D   Y+ +ID  CK G L  A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + + +  +  D++TY  +I  L    + +K   LFL+M    + PD   FN+++ G
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +     E++  M E+
Sbjct: 293 LCKEGKVEDAEEIMTYMIEK 312



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            I V+ N  V N   +  CL    + A  LF  M +     +  S+S L+      K   
Sbjct: 34  SISVKGNFGVSNEFENVKCL----DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYS 89

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             +S++ E+    I       +T+      +H+ +  F +     + G+  +   + T I
Sbjct: 90  SVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLI 149

Query: 278 DGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
            GL     + +A+ LF+ L R   CE D   Y  ++DGLCK G  + A++L   + +G+ 
Sbjct: 150 RGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGIT 209

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D   YNI+I A C DG +D A  L  +M+ K + PD + + +L+ G  + ++  KV  
Sbjct: 210 KPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRT 269

Query: 397 LLHRM 401
           L   M
Sbjct: 270 LFLEM 274



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A SL+ +M++    P+ V+++ L   L  +        +F E+ +  +  D +A  T
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 276 FIDGLC-----KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            ++  C       G+ V A+   + +       +  +++ LI GL    ++K A  LF  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGI-----PYNEVTFTTLIRGLFAENKVKDAVHLFKK 167

Query: 331 LPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           L R  +   D V Y  ++  LC  G   KA DL   ME     PD   +N ++    ++ 
Sbjct: 168 LVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDG 227

Query: 390 ETSKVVELLHRMDERN 405
                  LL+ M ++N
Sbjct: 228 MLDGATSLLNEMKQKN 243


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  303 bits (777), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 157/400 (39%), Positives = 240/400 (60%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E  VV      
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV------ 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK   +D A +L  +M+ K I PDV TYNS+I   C     ++A RL  +M
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTF+ ++D   K GK+ EA +L + MIQ  + PN   YN+L++GFC+  R+
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++F  M S  C  +V +Y+ LI G+CK K +E  + L+ EM  +G+    VTYNTL
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +AL +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I +Y+ +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 224/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +P+ +T++TLI+GL        A+ L + M+         C+PD  
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG------CQPDLF 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK G +D A  LL +M+   I  +VV YN++I G C     ++A  LF +M
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+V T++ ++  LC  G+  +AS+LL  MI+  + PN   +N+L+D F   G++
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M       N+ +Y+ LING+C +  ++ A  +++ M+SK   P VVTYNTL
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +     
Sbjct: 403 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLCK G+L+ A  +F  L +  +  ++ TYNIMI  +C  GK++   D
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWD 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ + + T++ G  R     +   L   M E
Sbjct: 523 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 208/391 (53%), Gaps = 6/391 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   N  TYS L+N  CR     +AL +  +M+    E      PD V  +
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYE------PDIVTLS 155

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    + +A  L+ QM +    PD VT+N++I G    N ++EA  L   M+ +
Sbjct: 156 SLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR 215

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++ T+  +++ LCK G ++ A  LL+ M +  +  N  +YNT++DG C    ++ A
Sbjct: 216 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDA 275

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +LF  ME+ G K +VF+Y+ LI+  C       A  L S+M+ + I P VVT+N+L   
Sbjct: 276 FDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDA 335

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KLFDEM +  +  +   Y + I+G C +  + EA ++F  +    C  D
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI G CK+ R++   ELF  + +  L+ + VTYN +I  L   G  D A  +F 
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            M + GV PD + ++ L+ G  +  +  K +
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 211/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF ++      P++I +S L++ + +     V ++L E+M N     G+    +  
Sbjct: 64  DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PHNHY 117

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +++  C+   +  A  +L +M      PD+VT +S++ G+C+    +EA  L  +M
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+ VTF+ ++  L  + K  EA  L++ M+  G +P+ F Y T+++G C  G +
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ME    + NV  Y+ +I+G CK K ++ A  L+++M +KGIKP V TYN+L
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +   A +L  +M    +  +   + + ID   K G ++EA +LF  +     
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +I +Y+ LI+G C   RL  A ++F  +     + DVVTYN +I   C   ++++  +
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  +G+  + V +NTL+ G  +  +     ++  +M
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+ LF EM+           P  + ++ ++  + K    D    L  QM++  I  +  T
Sbjct: 65  AVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+ ++  FC  +    A  +  +MM  G +P++VT S +++  C   ++ EA  L++ M+
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+   +NTL+ G  L  + + A  L   M + GC+ ++F+Y  ++NG CK  +I+
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+  VV YNT+  GL +   ++ AF LF++M+  G+  D + Y + I
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ +++ LID   K G+L  A +LF  + +  + 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++VTYN +I+  C   ++D+A  +F  M +K   PD V +NTL+ G  +     + +EL
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418

Query: 398 LHRMDER 404
              M +R
Sbjct: 419 FREMSQR 425



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 173/324 (53%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T+++LI+   + G  I A  LF+EMI  +        P+ V
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIV 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+G C    +D+A+++   M  K+  PDVVTYN++I+GFC A    E   LF EM
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++  L + G  + A ++ + M+  GV P+   Y+ L+DG C  G++
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    + N+++Y+I+I G CK  ++E    L+  +  KG+KP V+ Y T+
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       E A  LF EM+  G   D+  Y T I    ++G    + EL + +R    
Sbjct: 543 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 602

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
             D  + S +I+ L   GRL+ ++
Sbjct: 603 VGDASTISMVINML-HDGRLEKSY 625



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 154/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++     +PN++TY++LING C       A  +F  M++ +      C PD 
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 396

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  EL  +M  + +  + VTYN++I+G   A D + A+++F +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LCK GK+E+A  + E + +  + PN + YN +++G C  G+
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 577 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 626



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 154/294 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ FS ++  + K  K +    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M+  G 
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VT+NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  AL 
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E ++  Y+ +IDGLCK   +  A++LF+ +    +  DV TYN +I  LC
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V FN+L+    +  +  +  +L   M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 172/330 (52%), Gaps = 3/330 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L  +M      P ++ ++ ++      N  +    L  +M + G+  N  T+S+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  ++  A  +L  M+++G  P+    ++L++G+C   R++ A  L   M  MG
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K +  +++ LI+G   + +   A++L   M+++G +P + TY T+  GL +   ++ A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L  +M++  + A+   Y T IDGLCK  ++ +A +LF  +     + D+ +Y+ LI  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR   A  L   +    +  +VVT+N +I A   +GK+ +A  LF +M  + + P+ 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 376 VAFNTLMLG-CI--RNNETSKVVELLHRMD 402
           V +N+L+ G C+  R +E  ++  L+   D
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 141/272 (51%), Gaps = 6/272 (2%)

Query: 138 DELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++L +NG    K+++A  L   M++    P+   ++ L+       + +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G  HN ++YSIL+N +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 169

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L D+M   G   DT  + T I GL  +    EA+ L   +    C+ D+ +Y  +++
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK G + +A  L   + +G + A+VV YN +I  LC    MD A DLF  ME KG+ P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 374 DCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
           D   +N+L + C+ N    S    LL  M ER
Sbjct: 290 DVFTYNSL-ISCLCNYGRWSDASRLLSDMIER 320


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  303 bits (777), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 157/403 (38%), Positives = 234/403 (58%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +P+V+TY TLINGLC+ G+T  A+     M   N      C+P  V
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVV 195

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCK+  + +A  L   M  K I+P+  TY+S+I G C      EA RLF  M
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+ +TF+ ++D LCK G + +A  ++++MIQ  ++P+   YN+LMDG CL   +
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +F +M   GC  +V SY+ LINGYCK + ++ A+ L+ EM  +G+ P  VTYNTL
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++  A  LF EM  +G   D   YR   D LCKN  + EA+ L + +     
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI  YS ++DG+C++G L+ A +LF  L    L  DV TY IMI+ LC  G + +A  
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+  G +P+   +N +  G +RNNET + ++L   M  R
Sbjct: 496 LFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 8/354 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+ + A G  PN  TYS+LI+GLC  GH   A+ LF  MI+          PD +
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK------IMPDQL 265

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++D LCKEG V KA  ++  M   ++ PDVVTYNS++ G C  ++  +   +F  M
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V++++ +++  CK   M++A  L E M Q G+ P+   YNTL+ G C  GR+
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   ++ +Y IL +  CKN  +  A+ L   +    + P +  Y+ +
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++E A  LF ++   G+  D   Y   I+GLC+ G + EA +LF  +    C
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADG 354
             +  +Y+ +  G  ++     A +LF   L RG  I DV T  +++  L  DG
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSI-DVSTTTLLVEMLSDDG 558



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++      P+++ +S L+  + R  H    L+L+++M      FG+    +  
Sbjct: 37  DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQM----DSFGI--PHNTY 90

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L  +      P   T+ ++IRG C      EA +LF +M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QP+V+T+  +++ LCK G    A + L  M Q   RP   VY+T++D  C   ++
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   N F+YS LI+G C     + A+ L+  M+ + I P  +T+NTL
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V +A  + D M +  +  D   Y + +DG C    + + + +F T+    C
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + SY+ LI+G CK   +  A  LF  + +  LI D VTYN +IH LC  G++  A  
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M   G  PD V +  L     +N+  ++ + LL  ++  N
Sbjct: 391 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 166/361 (45%), Gaps = 35/361 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L  +M      P +V ++ ++         +    L+ +M   G+  N  T ++
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A +LF  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 196 CKHNVFSYSILING-----------------------------------YCKNKEIEGAL 220
            + +V +Y  LING                                    CK++++  AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           SL+S+ML+KGI P   TY++L  GL  +   + A +LF  M    +  D   + T +D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G +V+A  +   +     + D+ +Y+ L+DG C    +     +F ++ R   +  V
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           ++Y  +I+  C    MDKA  LF +M  +G+ PD V +NTL+ G          + L H 
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 401 M 401
           M
Sbjct: 395 M 395



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 142/294 (48%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
            N  ++A  LF  M+     P++V FS ++  + +         L + M   G+  N + 
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            N L++ FC   R+  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +G +P V+TY TL  GL ++     A +    M++         Y T ID LCK+  + 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           EAL LF  +       +  +YS LI GLC  G  K A  LF+++    ++ D +T+N ++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ALC +G + KAH +   M    + PD V +N+LM G    +E  K V +   M
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++    +P++  YS +++G+CR G    A +LF ++ +          PD  
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVR 475

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+GLC++G + +A +L  +M +   +P+  TYN + RGF   N++  A +LF EM
Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + +G   +V T +++++ L  +G  +   Q+L   +Q
Sbjct: 536 LSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/404 (39%), Positives = 243/404 (60%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF ++   G  P++ITY+T+I GLC+ GHT  AL L ++M     E G  CKPD 
Sbjct: 158 IDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM----EEKG--CKPDV 211

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+ID LCK+   ++A     +M D+ I P+VVTY+S++ GFC     NEA  LF +
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + V PN VTF++++D LCK G + EA ++ E+M + GV P+A+ Y+ LMDG+CL  +
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A++LF  M   G   +V  Y+ILING+CK++ +  A +L SEM  + + P  VTY+T
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  + + A KLF EM  +G+  D+  Y   +DGLCK+G++ EA  L + ++  K
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E  I  Y+ LI G+C  G+L+ A ELF +L    +   VVTY +MI  L  +G  ++A 
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++F  M   G  P+   +N  + G +RN + S  V L+  M  R
Sbjct: 512 EMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGR 555



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 196/404 (48%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F +L      P V+ ++ L+  L +  H    ++L ++M   N       +P+  
Sbjct: 52  DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSN------IRPNVY 105

Query: 62  IYTTIIDGLCKEG--FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
             T +I+ LC      V  A   L +M    + P  VT+ +++ G C      +A +LF 
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   G  P+++T++ I+  LCK G    A QLL+ M + G +P+   YNT++D  C   
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R N A   F  M   G   NV +YS +++G+C   ++  A SL+ +M+ + + P  VT+ 
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL +   +  A ++F+ M  +GV  D + Y   +DG C    + EA +LF  +   
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                +R Y+ LI+G CKS RL  A  L   +    L  D VTY+ ++   C  G+   A
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             LF +M + G+ PD + ++ L+ G  ++    +   LL  M E
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQE 449



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 41/347 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F+++   G  PNV+TYS++++G C  G    A +LF++MI  N        P+ V
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN------VMPNTV 282

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++DGLCKEG + +A+ +   M +  + PD  TY++++ G+C  +  +EA++LF  M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V  ++++++  CK+ ++ EA  LL  M    + P+   Y+TLM GFC  GR 
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402

Query: 182 NRAKELFVSMESMG---------------CKH--------------------NVFSYSIL 206
             A++LF  M S G               CKH                    ++  Y+IL
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G C   ++E A  L+S +  KGI+P+VVTY  +  GL +      A ++F +M  +G 
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             ++  Y   I G  +NG    A+ L   +       D  ++  L+D
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 2/315 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK--MEEAS 150
           P VV +N ++         +    L  +M    ++PNV T +++++ LC + +  +  A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
             L  M ++G++P    + TL++G C   ++  A +LF  +  MG   ++ +Y+ +I G 
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK      AL L  +M  KG KP VV YNT+   L +  +   A   F EM   G+  + 
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y + + G C  G + EA  LF+ +       +  +++ L+DGLCK G +  A  +F  
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  D  TY+ ++   C   +MD+A  LF  M  KG AP    +N L+ G  ++  
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 391 TSKVVELLHRMDERN 405
            ++   LL  M +R+
Sbjct: 367 LNEAKTLLSEMYDRD 381


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 157/400 (39%), Positives = 237/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY  ++NGLC+ G   +AL+L ++M  G  E       D V
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK   +D A  L  +M+ K I PDV TYNS+I   C     ++A RL   M
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTFS ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+    VTYNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +AL +F  L+  K 
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 224/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G +P+ +T++TLI+GL        A+ L ++M+         C+PD V
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G +D A  LL +M+   I  DVV YN++I G C     ++A  LF +M
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+V T++ ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ + + T++ G  R     +   L   M E
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 201/378 (53%), Gaps = 6/378 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ +Y+ LIN  CR     +AL +  +M+    E      PD V  +++++G C    + 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE------PDIVTLSSLLNGYCHSKRIS 167

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  L+ QM +    PD VT+N++I G    N ++EA  L  +M+ +G QP++VT+  ++
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK G ++ A  LL+ M +  +  +  +YNT++DG C    ++ A  LF  ME+ G +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIR 287

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +VF+Y+ LI+  C       A  L S M+ + I P VVT++ L     +  ++  A KL
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           +DEM +  +  D + Y + I+G C +  + EA  +F  +    C  ++ +Y+ LI G CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R++   ELF  + +  L+ + VTYN +I  L   G  D A  +F  M + GV PD + 
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 378 FNTLMLGCIRNNETSKVV 395
           ++ L+ G  +  +  K +
Sbjct: 468 YSILLDGLCKYGKLEKAL 485



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      P+++ ++ L++ + +     + ++L E M N    +      D  
Sbjct: 63  DAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY------DLY 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  C+   +  A  +L +M      PD+VT +S++ G+C++   ++A  L  +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+ VTF+ ++  L  + K  EA  L++ M+Q G +P+   Y  +++G C  G +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ME    + +V  Y+ +I+G CK K I+ A +L+++M +KGI+P V TYN+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +   A +L   M    +  +   +   ID   K G +VEA +L+  +     
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +YS LI+G C   RL  A  +F  +       +VVTYN +I   C   ++++  +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  +G+  + V +NTL+ G  +  +     ++  +M
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+ LF EM+           P  V +  ++  + K    D    L  +M++  I+ D+ +
Sbjct: 64  AIGLFGEMVQSRP------LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN +I  FC  +    A  +  +MM  G +P++VT S +++  C + ++ +A  L++ M+
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+   +NTL+ G  L  + + A  L   M   GC+ ++ +Y  ++NG CK  +I+
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+  VV YNT+  GL +   ++ AF LF++M+  G+  D + Y + I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +I+  C   ++D+A  +F  M +K   P+ V +NTL+ G  +     + +EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 398 LHRMDER 404
              M +R
Sbjct: 418 FREMSQR 424



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 172/324 (53%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T+S LI+   + G  + A  L++EMI  + +      PD  
Sbjct: 308 DASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID------PDIF 361

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+G C    +D+AK +   M  K+  P+VVTYN++I+GFC A    E   LF EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++  L + G  + A ++ + M+  GV P+   Y+ L+DG C  G++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    + ++++Y+I+I G CK  ++E    L+  +  KG+KP V+ Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       E A  LF EM+  G   D+  Y T I    ++G    + EL + +R    
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 601

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
             D  + S +I+ L   GRL+ ++
Sbjct: 602 VGDASTISMVINML-HDGRLEKSY 624



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  EL  +M  + +  + VTYN++I+G   A D + A+++F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LCK GK+E+A  + E + +  + P+ + YN +++G C  G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 153/294 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+ ++  + K  K +    L E M  + +  + + YN L
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VT+NTL  GLF  ++   A  L D+M + G   D   Y   ++GLCK G I  AL 
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y+ +IDGLCK   +  A+ LF+ +    +  DV TYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  +M  + + P+ V F+ L+   ++  +  +  +L   M +R+
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           N K+++A  L   M+Q    P+   +N L+       + +    L   M+++   ++++S
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A  L D+M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G   DT  + T I GL  +    EA+ L   +    C+ D+ +Y  +++GLCK G + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L   + +G + ADVV YN +I  LC    +D A  LF  ME KG+ PD   +N+L 
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL- 296

Query: 383 LGCIRN-NETSKVVELLHRMDER 404
           + C+ N    S    LL  M ER
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIER 319


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 235/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G +PN +TY  ++N +C++G T +A+ L  +M   N       K DAV
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+G +D A  L  +M+ K    D++TYN++I GFC A   ++  +L  +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVVTFSV++D   K GK+ EA QLL+ M+Q G+ PN   YN+L+DGFC   R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M S GC  ++ +++ILINGYCK   I+  L L+ EM  +G+    VTYNTL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++E A KLF EM    V  D  +Y+  +DGLC NG + +ALE+F  +   K 
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y  +I G+C + ++  AW+LF SLP   +  D   YNIMI  LC    + KA  
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M  +G APD + +N L+   + +++ +   EL+  M
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 220/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +P +IT +TL+NGLC  G    A+ L + M+    E G   +P+ V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV----ETGF--QPNEV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ +CK G    A ELL +M+++NI  D V Y+ +I G C     + A  LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +++T++ ++   C  G+ ++ ++LL  MI+  + PN   ++ L+D F   G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   N  +Y+ LI+G+CK   +E A+ +   M+SKG  P ++T+N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + ++++   +LF EM   GV A+T  Y T + G C++G +  A +LF+ +   + 
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY  L+DGLC +G L+ A E+F  + +  +  D+  Y I+IH +C   K+D A D
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV  D  A+N ++    R +  SK   L  +M E
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 217/399 (54%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  ++++ G   ++ T S +IN  CR      A +   +++    E      PD VI+ 
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE------PDTVIFN 162

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+++GLC E  V +A EL+ +M +    P ++T N+++ G C     ++A  L   M++ 
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN VT+  +++ +CK+G+   A +LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME  G K ++ +Y+ LI G+C     +    L  +M+ + I P VVT++ L   
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A +L  EM + G+A +T  Y + IDG CK   + EA+++   +    C+ D
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ LI+G CK+ R+    ELF  +    +IA+ VTYN ++   C  GK++ A  LF 
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M ++ V PD V++  L+ G   N E  K +E+  ++++
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 203/405 (50%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +      P VI ++ L + + +T    + L L ++M +     G+       
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK----GIA----HS 122

Query: 62  IYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           IYT   +I+  C+   +  A   + ++      PD V +N+++ G C     +EA  L  
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M++ G +P ++T + +++ LC NGK+ +A  L++ M++ G +PN   Y  +++  C +G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +   A EL   ME    K +   YSI+I+G CK+  ++ A +L++EM  KG K  ++TYN
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G     + +   KL  +M +  ++ +   +   ID   K G + EA +L + +   
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  +Y+ LIDG CK  RL+ A ++   +       D++T+NI+I+  C   ++D  
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +LF +M  +GV  + V +NTL+ G  ++ +     +L   M  R
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 165/325 (50%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A +L   M      P V+ +N +               L  +M  +G+  ++ T S++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  C+  K+  A   +  ++++G  P+  ++NTL++G CL  RV+ A EL   M  MG 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K  + + + L+NG C N ++  A+ L   M+  G +P  VTY  +   + +  Q   A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M+   +  D   Y   IDGLCK+G +  A  LF  + I   + DI +Y+ LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +GR     +L   + +  +  +VVT++++I +   +GK+ +A  L  +M  +G+AP+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +N+L+ G  + N   + ++++  M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLM 394



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 154/296 (52%), Gaps = 6/296 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  PN ITY++LI+G C+      A+ + + MI+        C PD +
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIM 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+G CK   +D   EL  +M  + +  + VTYN++++GFC +     AK+LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V+P++V++ +++D LC NG++E+A ++   + +  +  +  +Y  ++ G C   +V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +LF S+   G K +  +Y+I+I+  C+   +  A  L+ +M  +G  P  +TYN L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                       A +L +EM+  G  AD    +  I+ L         L++  T R
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 144/294 (48%)

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           +++A  LF +M+     P V+ F+ +   + K  + E    L + M   G+  + +  + 
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++ FC   +++ A      +  +G + +   ++ L+NG C    +  AL L   M+  G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            KPT++T NTL  GL    +V  A  L D M   G   +   Y   ++ +CK+G    A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           EL R +     +LD   YS +IDGLCK G L  A+ LF+ +      AD++TYN +I   
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           C  G+ D    L  DM  + ++P+ V F+ L+   ++  +  +  +LL  M +R
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 127/260 (48%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L   MIQ    P    +N L      T +      L   MES G  H++++ S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S   +++  G +P  V +NTL  GL    +V  A +L D M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G         T ++GLC NG + +A+ L   +     + +  +Y  +++ +CKSG+  +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            EL   +    +  D V Y+I+I  LC DG +D A +LF +ME KG   D + +NTL+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 385 CIRNNETSKVVELLHRMDER 404
                      +LL  M +R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 90/189 (47%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L+ +M+     PTV+ +N LF  + +  Q E    L  +M+  G+A   +     
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+  C+   +  A      +  L  E D   ++ L++GLC   R+  A EL   +     
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
              ++T N +++ LC +GK+  A  L   M   G  P+ V +  ++    ++ +T+  +E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 397 LLHRMDERN 405
           LL +M+ERN
Sbjct: 250 LLRKMEERN 258


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 240/401 (59%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF KL +   CEPN + Y T++NGLC+ GHT  A +L   M  G+       KP+ 
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNT 213

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +ID  CK+G +D A  LL +MK K+I PD+ TY+++I   C  +     + LF+E
Sbjct: 214 RTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + PNV TF+ ++D LCK GK+E+A +++  MI+ GV P+   YN ++DG+ L G+
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+RA+E+F SM +   + ++ SY+ILINGY + K+I+ A+ +  E+  KG+KP++VT N 
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE+ + + A   FDEM   G   D + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I+ Y+ +IDGLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+   ME  G   D   +N ++ G +R+N+ S++   L  +
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++      P+V ++S L+  +    H    ++LF E+        +       
Sbjct: 55  DAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI------HKLRIPVHEF 108

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I + +++  C     D    +L     K I  + VT+ ++IRG    N   +A  LF ++
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + + +PN V +  +M+ LCK G  ++A  LL LM Q   +PN   Y  ++D FC  G 
Sbjct: 169 VRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGM 228

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+      ++F+YS LI+  CK  + E   +L+ EM+   I P V T+N+
Sbjct: 229 LDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNS 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A ++   M   GV  D   Y   IDG    G +  A E+F ++    
Sbjct: 289 VIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS 348

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E DI SY+ LI+G  +  ++  A ++   + +  L   +VT N+++H L   G+   A 
Sbjct: 349 IEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + F +M + G  PD     TL+ G  +N    + +   H+++ R
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 1/291 (0%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P+V +FS ++  +           L   + ++ +  + F+ + +
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++  CL  R +    +       G  +N  +++ LI G     +++ A+ L+ +++ + I
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 232 -KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +P  V Y T+  GL +    ++AF L   M++     +T  Y   ID  CK+G +  A 
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L   ++      DI +YS LID LCK  + +    LF  +    +  +V T+N +I  L
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C +GK++ A ++   M  KGV PD + +N ++ G     +  +  E+   M
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   ++ L+         +    LF  +  +    + F  SI
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++N  C     +   S+ +    KGI    VT+ TL  GLF  ++V+ A  LF ++ R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 266 V-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           +   +   Y T ++GLCK G+  +A +L R +     + + R+Y+ +ID  CK G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + + +  +  D+ TY+ +I ALC   + +    LFL+M    + P+   FN+++ G
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +     E++  M E+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEK 312



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F KL+    + N+  Y+ +I+GLC+ G    A   FE++        +   PD +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVI 494

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G C+EG +D+AK++L +M+D     D  TYN ++RGF  +N  +E K    E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
             +       T  ++MD + ++  +      ++L I
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSITRKMHWIKLHI 590



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 5/226 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            I V+ N  V N   +  CL    + A  LF  M       +V S+S L+      K   
Sbjct: 34  SISVKGNFGVSNEFQNVKCL----DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYS 89

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             +SL+ E+    I       + +      +H+ +  F +     + G+  +   + T I
Sbjct: 90  SVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLI 149

Query: 278 DGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
            GL     + +A+ LF+ L R   CE +   Y  +++GLCK G  + A++L   + +G  
Sbjct: 150 RGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST 209

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             +  TY I+I A C DG +D A  L  +M+ K + PD   ++TL+
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 29/201 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA  +  ++   G +P+++T + L++GL   G T  A N F+EM++              
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430

Query: 50  -GEF--GVVCKP--------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G F  G+V +               +  IYT +IDGLCK G +DKA     ++    ++
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+TY ++I G+C     +EAK +  +M D G   +  T++VI+    ++ K+ E    
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550

Query: 153 LELMIQIGVRPNAFVYNTLMD 173
           LE +        A     LMD
Sbjct: 551 LEEIAGKSFSFEAATVELLMD 571


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 160/400 (40%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   + ++Y TLINGLC+ G T  AL + +++       G +   D V
Sbjct: 147 EALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI------EGKLVNTDVV 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  II+ LCK+  V  A +L  +M  K I+PDVVT+NS+I GFC      EA  LF EM
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V TFS+++D LCK+G +  A  +L +M++ GV P+   Y++LMDG+CL   V
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +F +M  +G   +  SY+I+ING  K K ++ ALSL+ EM  KGI P  VTYN+L
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A++L DEM  +G+ AD   Y + ID LCKN +I +A+ L + ++    
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ LIDGLCK GRLK A ++F  L       +  TYNIMI+ LC +G  ++A  
Sbjct: 441 QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEV 500

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G+ PD V + T++    R +E  K  +LL  M
Sbjct: 501 LLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  K++      +V+ Y+ +IN LC+      A  L+ EMI           PD V 
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR------ISPDVVT 236

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + ++I G C  G + +A  L  +M  KNINPDV T++ ++   C   +   AK +   MM
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QGV P+VVT+S +MD  C   ++ +A  +   M ++GV P+A  YN +++G      V+
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVD 356

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G   +  +Y+ LI+G CK   I  A  L  EM + GI   ++TYN+L 
Sbjct: 357 EALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L + H +++A  L  +++  G+    + Y   IDGLCK G +  A ++F+ L I    
Sbjct: 417 DVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYS 476

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           ++  +Y+ +I+GLCK G    A  L   +    +I D VTY  +I AL    + +KA  L
Sbjct: 477 VNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKL 536

Query: 363 FLDMEAKGV 371
             +M  +G+
Sbjct: 537 LREMIIRGL 545



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 190/376 (50%), Gaps = 13/376 (3%)

Query: 26  INGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
           +N    + H ++ +     ++  N   G + K +   YTT I              L  Q
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI-------------SLSHQ 84

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           ++ K I P +VT+N ++  +C+  +   A  +F +++  G  P  +TF+ +++ +C NGK
Sbjct: 85  LELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGK 144

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++EA    + +I +G   +   Y TL++G C  G    A ++   +E      +V  Y+I
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +IN  CK+K +  A  LYSEM++K I P VVT+N+L +G   + Q++ AF LF EM    
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D + +   +D LCK+G I  A  +   +       D+ +YS L+DG C    +  A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            +F ++ R  +     +YNIMI+ L     +D+A  LF +M  KG+APD V +N+L+ G 
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 386 IRNNETSKVVELLHRM 401
            +    S   +L+  M
Sbjct: 385 CKLGRISYAWQLVDEM 400



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 195/417 (46%), Gaps = 76/417 (18%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G  P ++T++ L+N  C  G    A ++F +++                
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKIL---------------- 121

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-------- 114
                    K G+                +P  +T+N++I G C      EA        
Sbjct: 122 ---------KLGY----------------HPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 115 -----------------------KRLFIEMMD----QGVQPNVVTFSVIMDELCKNGKME 147
                                   R  ++M+     + V  +VV +++I++ LCK+  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A QL   MI   + P+   +N+L+ GFC+ G++  A  LF  M       +V+++SIL+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CK+  I  A ++ + M+ +G+ P VVTY++L  G   +++V +A  +F  M R GVA
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
               +Y   I+GL K   + EAL LF+ +       D  +Y+ LIDGLCK GR+  AW+L
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL 396

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              +    + AD++TYN +I  LC +  +DKA  L   ++ +G+ P    +N L+ G
Sbjct: 397 VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 104/193 (53%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N     A+SL  ++  KGI PT+VT+N L      + ++  AF +F ++ + G    T  
Sbjct: 72  NNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTIT 131

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + T I+G+C NG + EAL     +  L   LD  SY  LI+GLCK G  + A ++   + 
Sbjct: 132 FNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE 191

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
             ++  DVV YNI+I++LC D  +  A+ L+ +M  K ++PD V FN+L+LG     +  
Sbjct: 192 GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLK 251

Query: 393 KVVELLHRMDERN 405
           +   L H M  +N
Sbjct: 252 EAFGLFHEMVLKN 264


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+P+V+TY++++NG+CR+G T +AL+L  +M   N       K D  
Sbjct: 166 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 219

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LC++G +D A  L  +M+ K I   VVTYNS++RG C A   N+   L  +M
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV+TF+V++D   K GK++EA++L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 280 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 339

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+    VTY+ L
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +ALE+F  L+  K 
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L I  Y+ +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A+ 
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G AP+   +NTL+   +R+ + +   +L+  M
Sbjct: 520 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+  T++TLI GL   G    A+ L + M+  NG     C+PD V 
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 185

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I++G+C+ G    A +LL +M+++N+  DV TY+++I   C     + A  LF EM 
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VVT++ ++  LCK GK  + + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     P +VT+ +L 
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV P+ + +  ++ G  +    S+   LL +M+E
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 14/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A ALF ++      P+++ +S   + + RT    + L+  +++ +NG            
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN-------- 112

Query: 61  VIYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            IYT   +I+  C+      A  +L ++      PD  T+N++I+G       +EA  L 
Sbjct: 113 -IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M++ G QP+VVT++ I++ +C++G    A  LL  M +  V+ + F Y+T++D  C  
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 231

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVT 237
           G ++ A  LF  ME+ G K +V +Y+ L+ G CK  K  +GAL L  +M+S+ I P V+T
Sbjct: 232 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVIT 290

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L     +  +++ A +L+ EM   G++ +   Y T +DG C    + EA  +   + 
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             KC  DI +++ LI G C   R+    ++F ++ +  L+A+ VTY+I++   C  GK+ 
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 410

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF +M + GV PD + +  L+ G   N +  K +E+   + +
Sbjct: 411 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 152/292 (52%), Gaps = 3/292 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FS     + +  +        + +   G+  N +  N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +   A  +   +  +G + +  +++ LI G     ++  A+ L   M+  G 
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P VVTYN++  G+        A  L  +M+   V AD + Y T ID LC++G I  A+ 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +     +  + +Y+ L+ GLCK+G+      L   +    ++ +V+T+N+++    
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
            +GK+ +A++L+ +M  +G++P+ + +NTLM G C++N  +E + +++L+ R
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 351



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L + MI+    P+   ++        T + N   +    +E  G  HN+++ +
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+  +   A S+  +++  G +P   T+NTL  GLF   +V  A  L D M  +
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y + ++G+C++G    AL+L R +     + D+ +YS +ID LC+ G +  A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    + + VVTYN ++  LC  GK +    L  DM ++ + P+ + FN L+  
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 385 CIRNNETSKVVELLHRMDER 404
            ++  +  +  EL   M  R
Sbjct: 298 FVKEGKLQEANELYKEMITR 317



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 163/388 (42%), Gaps = 65/388 (16%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------- 55
           A  LF ++ + G  P+V+TY  L++GLC  G    AL +FE++     + G+V       
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471

Query: 56  ----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                  KP+ + YT +I GLCK+G + +A  LL +M++    P
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL-----------CK 142
           +  TYN++IR      D   + +L  EM   G   +  +  +++D L           C 
Sbjct: 532 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 591

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV-- 200
           +   +    LLEL     +R ++  +  +     +T  +N        M S     ++  
Sbjct: 592 SKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRK 651

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIK------------PTVVTYNTLFIGLFEI 248
              S ++  + KN+++   + + +E+L+ G++            PT   +     G    
Sbjct: 652 LRRSSVLKKF-KNRDVR--VLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRR 708

Query: 249 H----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                 V  A +L  EM + G+A +T  Y + IDG CK   + EA ++   L + K + D
Sbjct: 709 PGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQML-DLMVTKGDSD 767

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           IR    L+ GL +  R     E + +LP
Sbjct: 768 IRY---LLAGLMRKKRKGSETEGWENLP 792



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 1/162 (0%)

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G+ +I + + A  LF EM R         +  F   + +       L+  + L +     
Sbjct: 53  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 111

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I + + +I+  C+  +   A+ +   + +     D  T+N +I  L  +GK+ +A  L 
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M   G  PD V +N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 213



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%)

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A +L + MIQ G+ PN   Y++L+DGFC   R++ A ++   M + G     +  + L+ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 209 GYCKNKEIEGALSLYSEM 226
              K  E EG  +L  ++
Sbjct: 778 KKRKGSETEGWENLPDDL 795


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+P+V+TY++++NG+CR+G T +AL+L  +M   N       K D  
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LC++G +D A  L  +M+ K I   VVTYNS++RG C A   N+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV+TF+V++D   K GK++EA++L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+    VTY+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +ALE+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L I  Y+ +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A+ 
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G AP+   +NTL+   +R+ + +   +L+  M
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+  T++TLI GL   G    A+ L + M+  NG     C+PD V 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I++G+C+ G    A +LL +M+++N+  DV TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VVT++ ++  LCK GK  + + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     P +VT+ +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV P+ + +  ++ G  +    S+   LL +M+E
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 14/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A ALF ++      P+++ +S   + + RT    + L+  +++ +NG            
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN-------- 122

Query: 61  VIYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            IYT   +I+  C+      A  +L ++      PD  T+N++I+G       +EA  L 
Sbjct: 123 -IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M++ G QP+VVT++ I++ +C++G    A  LL  M +  V+ + F Y+T++D  C  
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVT 237
           G ++ A  LF  ME+ G K +V +Y+ L+ G CK  K  +GAL L  +M+S+ I P V+T
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVIT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L     +  +++ A +L+ EM   G++ +   Y T +DG C    + EA  +   + 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             KC  DI +++ LI G C   R+    ++F ++ +  L+A+ VTY+I++   C  GK+ 
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF +M + GV PD + +  L+ G   N +  K +E+   + +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 158/299 (52%), Gaps = 6/299 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNVIT++ L++   + G    A  L++EMI      G+   P+ + Y T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +L  M     +PD+VT+ S+I+G+C     ++  ++F  +  +G+  N VT+S++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C++GK++ A +L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP V+TY  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++      D  S   +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 152/292 (52%), Gaps = 3/292 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FS     + +  +        + +   G+  N +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +   A  +   +  +G + +  +++ LI G     ++  A+ L   M+  G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P VVTYN++  G+        A  L  +M+   V AD + Y T ID LC++G I  A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +     +  + +Y+ L+ GLCK+G+      L   +    ++ +V+T+N+++    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
            +GK+ +A++L+ +M  +G++P+ + +NTLM G C++N  +E + +++L+ R
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L + MI+    P+   ++        T + N   +    +E  G  HN+++ +
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+  +   A S+  +++  G +P   T+NTL  GLF   +V  A  L D M  +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y + ++G+C++G    AL+L R +     + D+ +YS +ID LC+ G +  A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    + + VVTYN ++  LC  GK +    L  DM ++ + P+ + FN L+  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 385 CIRNNETSKVVELLHRMDER 404
            ++  +  +  EL   M  R
Sbjct: 308 FVKEGKLQEANELYKEMITR 327



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 1/162 (0%)

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G+ +I + + A  LF EM R         +  F   + +       L+  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I + + +I+  C+  +   A+ +   + +     D  T+N +I  L  +GK+ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M   G  PD V +N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+P+V+TY++++NG+CR+G T +AL+L  +M   N       K D  
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LC++G +D A  L  +M+ K I   VVTYNS++RG C A   N+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV+TF+V++D   K GK++EA++L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+    VTY+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +ALE+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L I  Y+ +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A+ 
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G AP+   +NTL+   +R+ + +   +L+  M
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+  T++TLI GL   G    A+ L + M+  NG     C+PD V 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I++G+C+ G    A +LL +M+++N+  DV TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VVT++ ++  LCK GK  + + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     P +VT+ +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV P+ + +  ++ G  +    S+   LL +M+E
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 14/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A ALF ++      P+++ +S   + + RT    + L+  +++ +NG            
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN-------- 122

Query: 61  VIYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            IYT   +I+  C+      A  +L ++      PD  T+N++I+G       +EA  L 
Sbjct: 123 -IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M++ G QP+VVT++ I++ +C++G    A  LL  M +  V+ + F Y+T++D  C  
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVT 237
           G ++ A  LF  ME+ G K +V +Y+ L+ G CK  K  +GAL L  +M+S+ I P V+T
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVIT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L     +  +++ A +L+ EM   G++ +   Y T +DG C    + EA  +   + 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             KC  DI +++ LI G C   R+    ++F ++ +  L+A+ VTY+I++   C  GK+ 
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF +M + GV PD + +  L+ G   N +  K +E+   + +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 158/299 (52%), Gaps = 6/299 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNVIT++ L++   + G    A  L++EMI      G+   P+ + Y T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +L  M     +PD+VT+ S+I+G+C     ++  ++F  +  +G+  N VT+S++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C++GK++ A +L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP V+TY  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++      D  S   +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 152/292 (52%), Gaps = 3/292 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FS     + +  +        + +   G+  N +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +   A  +   +  +G + +  +++ LI G     ++  A+ L   M+  G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P VVTYN++  G+        A  L  +M+   V AD + Y T ID LC++G I  A+ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +     +  + +Y+ L+ GLCK+G+      L   +    ++ +V+T+N+++    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
            +GK+ +A++L+ +M  +G++P+ + +NTLM G C++N  +E + +++L+ R
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L + MI+    P+   ++        T + N   +    +E  G  HN+++ +
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+  +   A S+  +++  G +P   T+NTL  GLF   +V  A  L D M  +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y + ++G+C++G    AL+L R +     + D+ +YS +ID LC+ G +  A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    + + VVTYN ++  LC  GK +    L  DM ++ + P+ + FN L+  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 385 CIRNNETSKVVELLHRMDER 404
            ++  +  +  EL   M  R
Sbjct: 308 FVKEGKLQEANELYKEMITR 327



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 1/162 (0%)

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G+ +I + + A  LF EM R         +  F   + +       L+  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I + + +I+  C+  +   A+ +   + +     D  T+N +I  L  +GK+ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M   G  PD V +N+++ G  R+ +TS  ++LL +M+ERN
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  300 bits (768), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 155/403 (38%), Positives = 236/403 (58%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G   N ++Y TLINGLC+ G T  AL L   +       G + +P+ V
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID +CK   V++A +L  +M  K I+PDVVTYN++I GFC      +A  LF +M
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV TF++++D  CK  +++EA  +L +M++ G++P+ F YN+LMD +CL   V
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +F ++   G   N+ SYSI+I+G+CK K+++ A++L+ EM    I P VVTYN+L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ L   ++    
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ L+DGLCK+GRL+ A  +F  L     I DV  Y  MI   C+ G  D++ D
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  P+ V +  ++      +E  K  +LL  M  R
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 217/399 (54%), Gaps = 16/399 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
             +L  +++  G   +++  S LIN   + G   ++ ++  +++    E      P+ + 
Sbjct: 91  VVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYE------PNVIT 144

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNI----NPDVVTYNSVIRGFCYANDSNEAKRLF 118
            TT+I GLC +G + +A    LQ  DK +    + + V+Y ++I G C    ++ A +L 
Sbjct: 145 LTTLIKGLCLKGQIHQA----LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLL 200

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +  + VQPNVV ++ I+D +CK   + EA  L   M+  G+ P+   YN L+ GFC+ 
Sbjct: 201 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIV 260

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A +LF  M       NV++++IL++G+CK + ++ A ++ + M+ +GIKP V TY
Sbjct: 261 GKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY 320

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N+L      + +V +A  +F+ + + GV  +  +Y   I G CK   + EA+ LF+ +  
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC 380

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+ +Y+ LIDGLCK G++  A +L   +    +  D +TYN ++ ALC + ++DK
Sbjct: 381 NNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 440

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN--ETSKVV 395
           A  L   M+ +G+ PD   + TL+ G  +N   E +++V
Sbjct: 441 AIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIV 479



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 200/388 (51%), Gaps = 6/388 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P++  +  ++  L ++ H    ++L  +M     EF  +   D VI + +I+   + G 
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQM-----EFNGITS-DLVILSILINCFSQLGQ 122

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
              +  +L ++      P+V+T  ++I+G C     ++A +   +++  G   N V++  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LCK G+   A QLL  +    V+PN  +YNT++D  C    VN A +L+  M S G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +V +Y+ LI+G+C   +++ A  L+++M+ + I P V T+N L  G  +  +++ A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +   M + G+  D + Y + +D  C    + +A  +F T+       +I SYS +I G 
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK  ++  A  LF  +    +I DVVTYN +I  LC  GK+  A  L  +M  +GV  D 
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +N+++    +N++  K + LL +M +
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKD 450



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 178/348 (51%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KP    +  I+  L K         L  QM+   I  D+V  + +I  F     +  +  
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G +PNV+T + ++  LC  G++ +A Q  + ++ +G   N   Y TL++G C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+ + A +L   ++    + NV  Y+ +I+  CK K +  A  LYSEM+SKGI P VV
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN L  G   + +++ A  LF++M    +  + + +   +DG CK   + EA  +   +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D+ +Y+ L+D  C    +  A  +F+++ +  +  ++ +Y+IMIH  C   K+
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A +LF +M    + PD V +N+L+ G  +  + S  ++L+  M +R
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR 416



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%)

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           + K    S    L+ Q   +P+ F +  ++     +   +    L   ME  G   ++  
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
            SILIN + +  +   + S+ +++L  G +P V+T  TL  GL    Q+ +A +  D++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G   +  +Y T I+GLCK G    AL+L R +     + ++  Y+ +ID +CK   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A++L+  +    +  DVVTYN +I   C  GKM  A DLF  M  + + P+   FN L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 383 LG 384
            G
Sbjct: 290 DG 291


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/400 (39%), Positives = 235/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+  +GC+PN +TY  ++N +C++G T +A+ L  +M   N       K DAV
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK G +D A  L  +M+ K I  +++TYN +I GFC A   ++  +L  +M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVVTFSV++D   K GK+ EA +L + MI  G+ P+   Y +L+DGFC    +
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A ++   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+    VTYNTL
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E+ ++  A +LF EM    V  +   Y+  +DGLC NG   +ALE+F  +   K 
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y+ +I G+C + ++  AW+LF SLP   +   V TYNIMI  LC  G + +A  
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G APD   +N L+   + + + +K V+L+  +
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702



 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 225/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +P++IT +TL+NGLC +G    A+ L ++M+    E+G  C+P+AV
Sbjct: 274 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAV 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ +CK G    A ELL +M+++NI  D V Y+ +I G C     + A  LF EM
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N++T+++++   C  G+ ++ ++LL  MI+  + PN   ++ L+D F   G++
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL   M   G   +  +Y+ LI+G+CK   ++ A  +   M+SKG  P + T+N L
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + ++++   +LF +M   GV ADT  Y T I G C+ G +  A ELF+ +   K 
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y  L+DGLC +G  + A E+F  + +  +  D+  YNI+IH +C   K+D A D
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 627

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P    +N ++ G  +    S+   L  +M+E
Sbjct: 628 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 669



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 221/399 (55%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  +++  G   N+ T S +IN  CR     +A +   ++I    E      P+ + ++
Sbjct: 207 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 260

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLC EG V +A EL+ +M +    PD++T N+++ G C +    EA  L  +M++ 
Sbjct: 261 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 320

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN VT+  +++ +CK+G+   A +LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 321 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME  G   N+ +Y+ILI G+C     +    L  +M+ + I P VVT++ L   
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A +L  EM   G+A DT  Y + IDG CK  ++ +A ++   +    C+ +
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+++ LI+G CK+ R+    ELF  +    ++AD VTYN +I   C  GK++ A +LF 
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M ++ V P+ V +  L+ G   N E+ K +E+  ++++
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 165/314 (52%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           + A L   +      PNV+T+S LI+   + G    A  L +EMI+     G+   PD +
Sbjct: 414 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTI 467

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDG CKE  +DKA +++  M  K  +P++ T+N +I G+C AN  ++   LF +M
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 527

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  + VT++ ++   C+ GK+  A +L + M+   V PN   Y  L+DG C  G  
Sbjct: 528 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 587

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+F  +E    + ++  Y+I+I+G C   +++ A  L+  +  KG+KP V TYN +
Sbjct: 588 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 647

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +  A  LF +M+  G A D W Y   I     +G   ++++L   L+    
Sbjct: 648 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 707

Query: 302 ELDIRSYSCLIDGL 315
            +D  +   +ID L
Sbjct: 708 SVDASTIKMVIDML 721



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P VI +S L + + +T    + L L ++M     E   +   +    + +I+  C+   +
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKL 237

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A   + ++      P+ +T++++I G C     +EA  L   M++ G +P+++T + +
Sbjct: 238 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LC +GK  EA  L++ M++ G +PNA  Y  +++  C +G+   A EL   ME    
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K +   YSI+I+G CK+  ++ A +L++EM  KGI   ++TYN L  G     + +   K
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M +  +  +   +   ID   K G + EA EL + +       D  +Y+ LIDG C
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K   L  A ++   +       ++ T+NI+I+  C   ++D   +LF  M  +GV  D V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +NTL+ G     + +   EL   M  R
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSR 565



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 165/326 (50%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            D A +L   M      P V+ ++ +          +    L  +M  +G+  N+ T S+
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  K+  A   +  +I++G  PN   ++TL++G CL GRV+ A EL   M  MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K ++ + + L+NG C + +   A+ L  +M+  G +P  VTY  +   + +  Q   A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +M+   +  D   Y   IDGLCK+G +  A  LF  + +     +I +Y+ LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C +GR     +L   + +  +  +VVT++++I +   +GK+ +A +L  +M  +G+APD 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + + +L+ G  + N   K  +++  M
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLM 492



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 147/309 (47%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           ++Y   +R       +++A  LF +M+     P V+ FS +   + K  + +    L + 
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  + +++ FC   ++  A      +  +G + N  ++S LING C    
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL L   M+  G KP ++T NTL  GL    +   A  L D+M  +G   +   Y  
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++ +CK+G    A+EL R +     +LD   YS +IDGLCK G L  A+ LF+ +    
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  +++TYNI+I   C  G+ D    L  DM  + + P+ V F+ L+   ++  +  +  
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451

Query: 396 ELLHRMDER 404
           EL   M  R
Sbjct: 452 ELHKEMIHR 460



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 93/189 (49%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L+ +M+     PTV+ ++ LF  + +  Q +    L  +M+  G+A + +     
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+  C+   +  A      +  L  E +  ++S LI+GLC  GR+  A EL   +     
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D++T N +++ LC  GK  +A  L   M   G  P+ V +  ++    ++ +T+  +E
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 397 LLHRMDERN 405
           LL +M+ERN
Sbjct: 348 LLRKMEERN 356


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/400 (39%), Positives = 235/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+  +GC+PN +TY  ++N +C++G T +A+ L  +M   N       K DAV
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK G +D A  L  +M+ K I  +++TYN +I GFC A   ++  +L  +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVVTFSV++D   K GK+ EA +L + MI  G+ P+   Y +L+DGFC    +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A ++   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+    VTYNTL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E+ ++  A +LF EM    V  +   Y+  +DGLC NG   +ALE+F  +   K 
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y+ +I G+C + ++  AW+LF SLP   +   V TYNIMI  LC  G + +A  
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G APD   +N L+   + + + +K V+L+  +
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604



 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 225/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +P++IT +TL+NGLC +G    A+ L ++M+    E+G  C+P+AV
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ +CK G    A ELL +M+++NI  D V Y+ +I G C     + A  LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N++T+++++   C  G+ ++ ++LL  MI+  + PN   ++ L+D F   G++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL   M   G   +  +Y+ LI+G+CK   ++ A  +   M+SKG  P + T+N L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + ++++   +LF +M   GV ADT  Y T I G C+ G +  A ELF+ +   K 
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y  L+DGLC +G  + A E+F  + +  +  D+  YNI+IH +C   K+D A D
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P    +N ++ G  +    S+   L  +M+E
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 221/399 (55%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  +++  G   N+ T S +IN  CR     +A +   ++I    E      P+ + ++
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 162

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLC EG V +A EL+ +M +    PD++T N+++ G C +    EA  L  +M++ 
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN VT+  +++ +CK+G+   A +LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME  G   N+ +Y+ILI G+C     +    L  +M+ + I P VVT++ L   
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A +L  EM   G+A DT  Y + IDG CK  ++ +A ++   +    C+ +
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+++ LI+G CK+ R+    ELF  +    ++AD VTYN +I   C  GK++ A +LF 
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M ++ V P+ V +  L+ G   N E+ K +E+  ++++
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           + A L   +      PNV+T+S LI+   + G    A  L +EMI+     G+   PD +
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTI 369

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDG CKE  +DKA +++  M  K  +P++ T+N +I G+C AN  ++   LF +M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  + VT++ ++   C+ GK+  A +L + M+   V PN   Y  L+DG C  G  
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+F  +E    + ++  Y+I+I+G C   +++ A  L+  +  KG+KP V TYN +
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +  A  LF +M+  G A D W Y   I     +G   ++++L   L+    
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
            +D  +   +ID L   GRLK ++
Sbjct: 610 SVDASTIKMVIDML-SDGRLKKSF 632



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P VI +S L + + +T    + L L ++M     E   +   +    + +I+  C+   +
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKL 139

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A   + ++      P+ +T++++I G C     +EA  L   M++ G +P+++T + +
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LC +GK  EA  L++ M++ G +PNA  Y  +++  C +G+   A EL   ME    
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K +   YSI+I+G CK+  ++ A +L++EM  KGI   ++TYN L  G     + +   K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M +  +  +   +   ID   K G + EA EL + +       D  +Y+ LIDG C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K   L  A ++   +       ++ T+NI+I+  C   ++D   +LF  M  +GV  D V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +NTL+ G     + +   EL   M  R
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSR 467



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 165/325 (50%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A +L   M      P V+ ++ +          +    L  +M  +G+  N+ T S++
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  C+  K+  A   +  +I++G  PN   ++TL++G CL GRV+ A EL   M  MG 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K ++ + + L+NG C + +   A+ L  +M+  G +P  VTY  +   + +  Q   A +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M+   +  D   Y   IDGLCK+G +  A  LF  + +     +I +Y+ LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +GR     +L   + +  +  +VVT++++I +   +GK+ +A +L  +M  +G+APD +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            + +L+ G  + N   K  +++  M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLM 394



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 147/309 (47%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           ++Y   +R       +++A  LF +M+     P V+ FS +   + K  + +    L + 
Sbjct: 54  LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  + +++ FC   ++  A      +  +G + N  ++S LING C    
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL L   M+  G KP ++T NTL  GL    +   A  L D+M  +G   +   Y  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++ +CK+G    A+EL R +     +LD   YS +IDGLCK G L  A+ LF+ +    
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  +++TYNI+I   C  G+ D    L  DM  + + P+ V F+ L+   ++  +  +  
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 396 ELLHRMDER 404
           EL   M  R
Sbjct: 354 ELHKEMIHR 362



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 93/189 (49%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L+ +M+     PTV+ ++ LF  + +  Q +    L  +M+  G+A + +     
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+  C+   +  A      +  L  E +  ++S LI+GLC  GR+  A EL   +     
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D++T N +++ LC  GK  +A  L   M   G  P+ V +  ++    ++ +T+  +E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 397 LLHRMDERN 405
           LL +M+ERN
Sbjct: 250 LLRKMEERN 258


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/403 (38%), Positives = 242/403 (60%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G + N ++Y+TLING+C+ G T  A+    ++       G + KPD V
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID------GRLTKPDVV 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID +CK   V +A  L  +M  K I+ DVVTYN++I GFC      EA  L  EM
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV T+++++D LCK GK++EA  +L +M++  V+P+   Y+TLMDG+ L   V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +VTY++L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++   + L DEM+  G  AD   Y + IDGLCKNG++  A+ LF  ++  + 
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +++ L+DGLCK GRLK A E+F  L       +V TYN+MI+  C  G +++A  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   ME  G  P+   F T+++   + +E  K  +LL +M  R
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P++IT + LIN  C  G      ++  +++           PD V 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             T+I GLC +G V KA     ++  +    + V+Y ++I G C   D+  A +   ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID 191

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +P+VV ++ I+D +CK   + EA  L   M   G+  +   YNTL+ GFC+ G++ 
Sbjct: 192 GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KP V+TY+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EAL LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             I +YS LIDGLCKSGR+   W+L   +      ADV+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M+ + + P+   F  L+ G  +        E+   +
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 175/347 (50%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+D   K      A  L  +++ K I PD++T N +I  FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++ +G  P+ VT + ++  LC  G++++A    + ++  G + N   Y TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A +    ++    K +V  Y+ +I+  CK + +  A  L+SEM  KGI   VVT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  G   + +++ A  L +EM    +  + + Y   +D LCK G + EA  +   + 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ +YS L+DG      +K A  +F+++    +  DV TY I+I+  C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A +LF +M  K + P  V +++L+ G  ++   S V +L+  M +R
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 157/313 (50%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++ +N ++  F      + A  L   +  +G+QP+++T +++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +++ G  P+    NTL+ G CL G+V +A      + + G + N  SY+ LING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A+    ++  +  KP VV YNT+   + +   V  A+ LF EM   G++AD   
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C  G + EA+ L   + +     ++ +Y+ L+D LCK G++K A  +   + 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  DV+TY+ ++       ++ KA  +F  M   GV PD   +  L+ G  +N    
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 393 KVVELLHRMDERN 405
           + + L   M ++N
Sbjct: 357 EALNLFKEMHQKN 369



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 70/125 (56%), Gaps = 6/125 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A ALF K+K     PN+ T++ L++GLC+ G    A  +F++++       V       
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT----- 481

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK+G +++A  +L +M+D    P+  T+ ++I      +++++A++L  +M
Sbjct: 482 -YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540

Query: 122 MDQGV 126
           + +G+
Sbjct: 541 IARGL 545


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/403 (38%), Positives = 242/403 (60%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  + A GC+P+  TY+T+INGLC+ G T +A  LF++M          C+ + V
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG------CQLNVV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I  LCK   V++A ++   MK K+I+P + TY S+I+G C  +   EA  L  EM
Sbjct: 117 TYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PNVVTF+V++D  CK GK+  A  +L+ M ++GV P+   YN+LM G+ +   V
Sbjct: 177 TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEV 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M + GCK +VFSYSILINGYCK K I+ A  L++EM+ +G  P  V+YNTL
Sbjct: 237 VEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A  LF  M  +G   + + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ L++ +CKSG LK A ELF  L    L  +V  Y  +I+ LC +G +D+A +
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F +ME  G  PD  ++N ++ G +++ + S+ V L+  M +R
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 193/388 (49%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN  T + LIN  C+     +  ++  + I    + G+  +P  V +TT+I+GL K 
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGI----KLGL--QPTIVTFTTLINGLGKV 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A EL   M  +   PD  TY ++I G C   ++  A  LF +M + G Q NVVT+
Sbjct: 59  GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++  LCK  ++ EA  +   M    + P  F Y +L+ G C   R   A  L   M S
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +    NV ++++L++ +CK  ++  A  +   M   G++P VVTYN+L  G     +V  
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KLFD M   G   D ++Y   I+G CK   I EA +LF  +       +  SY+ LI 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC+ GRL+ A +LF ++     + ++ TY I++   C  G + KA  LF  M++  + P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V +N L+    ++       EL   +
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSEL 386



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +   +   G EP+V+TY++L+ G       + A  LF+ MI         CKPD 
Sbjct: 202 LAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG------CKPDV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+ +I+G CK   +D+AK+L  +M  +   P+ V+YN++I G C      EA+ LF  
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ T+++++D  CK G + +A +L   M    ++PN  +YN L++  C +G 
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+ELF  +  +G + NV  Y+ +ING CK   ++ AL  +  M   G  P   +YN 
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G  +     RA  L  EM+  G   D
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 35/229 (15%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           ME  G   N  + +ILIN +C+ + ++   S+ ++ +  G++PT+VT+ TL  GL ++ +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
             +A +LFD+M   G   D + Y T I+GLCK G    A  LF+ +    C+L++ +YS 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 311 LIDGLCKSGRLKIAWELFH---------------SLPRGV-------------------- 335
           LI  LCK  R+  A ++F                SL +G+                    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++ +VVT+N+++   C +GK+  A  +   M   GV PD V +N+LM G
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYG 229



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF++L   G +PNV  Y+T+INGLC+ G    AL  F  M +        C PD  
Sbjct: 378 DARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG------CPPDEF 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
            Y  II G  +     +A  L+ +M+D+    D  T
Sbjct: 432 SYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/394 (41%), Positives = 235/394 (59%), Gaps = 8/394 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+ A G + N ++Y TL+NGLC+ G T  A+ L   MI          +PD V+Y TIID
Sbjct: 227 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLR-MIEDRST-----RPDVVMYNTIID 280

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+  V++A +   +M  + I PDV+TY+++I GFC A     A  L  EM  + + P
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP 340

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V T+++++D LCK GK++EA  LL +M + GV+PN   Y+TLMDG+CL G V+ AK++F
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
            +M       +V SY+I+ING CK K ++ A++L  EML K + P  VTYN+L  GL + 
Sbjct: 401 HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A  L  E+   G  AD   Y + +DGLCKN  + +A+ LF  ++    + +  +Y
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520

Query: 309 SCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           + LIDGLCK  RLK A +LF H L +G  I DV TYN+MI  LC +G +D+A  +   ME
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCCI-DVYTYNVMIGGLCKEGMLDEALAMKSKME 579

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G  PD V F  ++      +E  K  +LLH M
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++     P+V+ Y+T+I+GLC+      A + + EM N  G F     PD + 
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM-NSRGIF-----PDVIT 309

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+I G C  G +  A  LL +M  KNINPDV TY  +I   C      EAK L   M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV+PNVVT+S +MD  C  G++  A Q+   M+Q  V P+   YN +++G C    V+
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       N  +Y+ LI+G CK+  I  AL L  E+  +G    V+TY +L 
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +++A  LF +M+  G+  + + Y   IDGLCK   +  A +LF+ + +  C 
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D+ +Y+ +I GLCK G L  A  +   +     I D VT+ I+I +L    + DKA  L
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKL 609

Query: 363 FLDMEAKGV 371
             +M AKG+
Sbjct: 610 LHEMIAKGL 618



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 183/356 (51%)

Query: 49  NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
           NG   +   P  + +  I+  L K      A  L  QM+ K I PD+VT + +I  FC+ 
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
                +  +  +++  G QPN +  + +M  LC  G+++++    + ++  G + N   Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
            TL++G C  G    A +L   +E    + +V  Y+ +I+G CK+K +  A   Y+EM S
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +GI P V+TY+TL  G     Q+  AF L +EM    +  D + Y   ID LCK G + E
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  L   +     + ++ +YS L+DG C  G +  A ++FH++ +  +   V +YNIMI+
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN 420

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LC    +D+A +L  +M  K V P+ V +N+L+ G  ++   +  ++L+  +  R
Sbjct: 421 GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 200/404 (49%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A + F  +      P++I +  ++  L +  H   A++L ++M + G        +PD 
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKG-------IEPDL 167

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V  + +I+  C  G +  +  +L ++      P+ +   ++++G C   +  ++     +
Sbjct: 168 VTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDK 227

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG Q N V++  +++ LCK G+   A +LL ++     RP+  +YNT++DG C    
Sbjct: 228 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKL 287

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A + +  M S G   +V +YS LI G+C   ++ GA SL +EM  K I P V TY  
Sbjct: 288 VNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTI 347

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  +++ A  L   M + GV  +   Y T +DG C  G +  A ++F  +   +
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + SY+ +I+GLCK   +  A  L   +    ++ + VTYN +I  LC  G++  A 
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           DL  ++  +G   D + + +L+ G  +N    K + L  +M ER
Sbjct: 468 DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKER 511



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 147/280 (52%), Gaps = 6/280 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A +L  ++      P+V TY+ LI+ LC+ G    A NL   M     + GV  KP+ 
Sbjct: 324 MGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT----KEGV--KPNV 377

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++DG C  G V  AK++   M    +NP V +YN +I G C     +EA  L  E
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + V PN VT++ ++D LCK+G++  A  L++ +   G   +   Y +L+DG C    
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  LF+ M+  G + N ++Y+ LI+G CK   ++ A  L+  +L KG    V TYN 
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  GL +   ++ A  +  +M+ +G   D   +   I  L
Sbjct: 558 MIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 108/197 (54%), Gaps = 6/197 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++      PN +TY++LI+GLC++G    AL+L +E+ +  G+       D +
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL-HHRGQ-----PADVI 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+++DGLCK   +DKA  L ++MK++ I P+  TY ++I G C       A++LF  +
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   +V T++V++  LCK G ++EA  +   M   G  P+A  +  ++         
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEN 603

Query: 182 NRAKELFVSMESMGCKH 198
           ++A++L   M + G  H
Sbjct: 604 DKAEKLLHEMIAKGLLH 620



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 26/338 (7%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           K I P++VT + +I    +      +  +  +++  G QPN +T + +M      G+   
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETRC 59

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGF---------------------CLTGRVNRAKEL 187
           A +L  ++     RP  ++ ++L                          +   V+ A   
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M  M    ++  +  ++    K K    A+SL  +M  KGI+P +VT + L      
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           + Q+  +F +  ++ + G   +T    T + GLC  G + ++L     +     +++  S
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y  L++GLCK G  + A +L   +       DVV YN +I  LC D  +++A+D + +M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++G+ PD + ++TL+ G     +      LL+ M  +N
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  298 bits (763), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 237/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY  ++NGLC+ G   +AL+L ++M  G  E      P  V
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE------PGVV 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIID LC    V+ A  L  +M +K I P+VVTYNS+IR  C     ++A RL  +M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTFS ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +Y+ LI G+CK K ++  + L+ EM  +G+    VTY TL
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  + + A  +F +M   GV  D   Y   +DGLC NG +  AL +F  L+  K 
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ +I+G+CK+G+++  W+LF SL    +  +VVTY  M+   C  G  ++A  
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+ +G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/407 (35%), Positives = 223/407 (54%), Gaps = 16/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  ++   G +P+  T++TLI+GL R      A+ L + M+         C+PD V
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG------CQPDLV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G +D A  LL +M+   I P VV YN++I   C   + N+A  LF EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PNVVT++ ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL-----CKNGYIVEALELFRTL 296
             G  +  +V+   +LF EM + G+  +T  Y T I G      C N  IV     F+ +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV-----FKQM 457

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  DI +YS L+DGLC +G+++ A  +F  L R  +  D+ TYNIMI  +C  GK+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   DLF  +  KGV P+ V + T+M G  R     +   L   M E
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 206/399 (51%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   N+ TYS LIN  CR     +AL +  +M+    E      PD V   
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLN 155

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    +  A  L+ QM +    PD  T+N++I G    N ++EA  L   M+ +
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++VT+ ++++ LCK G ++ A  LL+ M Q  + P   +YNT++D  C    VN A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  M++ G + NV +Y+ LI   C       A  L S+M+ + I P VVT++ L   
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KL+DEM +  +  D + Y + I+G C +  + EA  +F  +    C  +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI G CK+ R+    ELF  + +  L+ + VTY  +IH      + D A  +F 
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNN--ETSKVV-ELLHR 400
            M + GV PD + ++ L+ G   N   ET+ VV E L R
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+NLF +M+           P  V ++ ++  + K    D    L  QM++  I+ ++ T
Sbjct: 65  AVNLFGDMVKSRPF------PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+ +I  FC  +  + A  +  +MM  G +P++VT + +++  C   ++ +A  L+  M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P++F +NTL+ G     R + A  L   M   GC+ ++ +Y I++NG CK  +I+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+P VV YNT+   L     V  A  LF EM   G+  +   Y + I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +I+  C   ++D+A  +F  M +K   P+ V +NTL+ G  +     + +EL
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 398 LHRMDER 404
              M +R
Sbjct: 419 FREMSQR 425



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 141/241 (58%), Gaps = 6/241 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 396

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   VD+  EL  +M  + +  + VTY ++I GF  A + + A+ +F +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LC NGK+E A  + E + +  + P+ + YN +++G C  G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF S+   G K NV +Y+ +++G+C+    E A +L+ EM  +G  P   TYNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576

Query: 241 L 241
           L
Sbjct: 577 L 577



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 146/294 (49%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V FS ++  + K  K +    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G + ++ + + L+NG+C    I  A+SL  +M+  G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P   T+NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G I  AL 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E  +  Y+ +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V F+ L+   ++  +  +  +L   M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 138/260 (53%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+++A  L   M++    P+   ++ L+       + +    L   M+++G  HN+++YS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++ ++M+  G +P +VT N+L  G    +++  A  L  +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D++ + T I GL ++    EA+ L   + +  C+ D+ +Y  +++GLCK G + +A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +G +   VV YN +I ALC    ++ A +LF +M+ KG+ P+ V +N+L+  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 385 CIRNNETSKVVELLHRMDER 404
                  S    LL  M ER
Sbjct: 301 LCNYGRWSDASRLLSDMIER 320



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 39/247 (15%)

Query: 156 MIQIGVRPNAFVYNTLM-DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           +  I    N FV+ +L+  G C T   + +   F   +  G +++    SI       + 
Sbjct: 4   LFAISSTGNRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISI---NRLNDL 60

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ A++L+ +M+     P++V ++ L   + ++++ +    L ++MQ  G++ + +   
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY--- 117

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
                                           +YS LI+  C+  +L +A  +   + + 
Sbjct: 118 --------------------------------TYSILINCFCRRSQLSLALAVLAKMMKL 145

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               D+VT N +++  C   ++  A  L   M   G  PD   FNTL+ G  R+N  S+ 
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205

Query: 395 VELLHRM 401
           V L+ RM
Sbjct: 206 VALVDRM 212



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  L   G +PNV+TY+T+++G CR G    A  LF EM     E G +  PD+  Y T
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM----KEEGPL--PDSGTYNT 576

Query: 66  IIDGLCKEGFVDKAKELLLQMK 87
           +I    ++G    + EL+ +M+
Sbjct: 577 LIRAHLRDGDKAASAELIREMR 598


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  298 bits (762), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A  L  +M  G  E      P  +
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE------PGVL 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTTIIDGLCK   +D A  L  +M+ K I P+VVTY+S+I   C     ++A RL  +M
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+V TFS ++D   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK++F  M S  C  +V SYS LI G+CK K ++  + L+ EM  +G+    VTY TL
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  I +Y+ +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  P+   +NTL+   +R+ +     EL+  M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 225/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +PN +T++TLI+GL        A+ L + M+         C+PD V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG------CQPDLV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G  D A  LL +M+   + P V+ Y ++I G C     ++A  LF EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +AS+LL  MI+  + P+ F ++ L+D F   G++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   P VV+Y+TL
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V+   +LF EM + G+  +T  Y T I GL + G    A E+F+ +     
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   D
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF ++  KGV PD VA+NT++ G  R     +   L   M E
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 206/399 (51%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   N  TYS LIN  CR     +AL +  +M+    E      P+ V  +
Sbjct: 102 SLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLS 155

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    + +A  L+ QM      P+ VT+N++I G    N ++EA  L   M+ +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++VT+ V+++ LCK G  + A  LL  M Q  + P   +Y T++DG C    ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME+ G + NV +YS LI+  C       A  L S+M+ + I P V T++ L   
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KL+DEM +  +      Y + I+G C +  + EA ++F  +    C  D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + SYS LI G CK+ R+    ELF  + +  L+ + VTY  +I  L   G  D A ++F 
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
           +M + GV P+ + +NTL+ G  +N +  K   V E L R
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 6/270 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P+++TYS+LING C       A  +FE M++ +      C PD 
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I G CK   VD+  EL  +M  + +  + VTY ++I+G   A D + A+ +F E
Sbjct: 397 VSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE 456

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P  + YN +++G C  G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+ LF EM+           P  + ++ ++  + K    D    L  QM++  +  +  T
Sbjct: 65  AVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+ +I  FC  +    A  +  +MM  G +PN+VT S +++  C + ++ EA  L++ M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   +NTL+ G  L  + + A  L   M + GC+ ++ +Y +++NG CK  + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L ++M    ++P V+ Y T+  GL +   ++ A  LF EM+  G+  +   Y + I
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   D+ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             +VTY+ +I+  C   ++D+A  +F  M +K   PD V+++TL+ G  +     + +EL
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418

Query: 398 LHRMDER 404
              M +R
Sbjct: 419 FREMSQR 425



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 146/294 (49%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ FS ++  + K  K +    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + N+ + S L+NGYC +K I  A++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P  VT+NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E  +  Y+ +IDGLCK+  +  A  LF  +    +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + PD   F+ L+   ++  +  +  +L   M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 169/326 (51%), Gaps = 3/326 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L  +M      P ++ ++ ++      N  +    L  +M + G+  N  T+S+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  ++  A  +L  M+++G  PN    ++L++G+C + R++ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M++KG +P +VTY  +  GL +    + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L ++M++  +      Y T IDGLCKN ++ +AL LF+ +       ++ +YS LI  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR   A  L   +    +  DV T++ +I A   +GK+ +A  L+ +M  + + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 376 VAFNTLMLG-CI--RNNETSKVVELL 398
           V +++L+ G C+  R +E  ++ E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFM 387



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 142/272 (52%), Gaps = 6/272 (2%)

Query: 138 DELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++L +NG    K+++A  L   M++    P+   ++ L+       + +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G  HN ++YSILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L D+M   G   +T  + T I GL  +    EA+ L   +    C+ D+ +Y  +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK G   +A+ L + + +G L   V+ Y  +I  LC +  MD A +LF +ME KG+ P
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289

Query: 374 DCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
           + V +++L + C+ N    S    LL  M ER
Sbjct: 290 NVVTYSSL-ISCLCNYGRWSDASRLLSDMIER 320



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF ++   G   N +TY+TLI GL + G   +A  +F+EM++     GV   P+ +
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++DGLCK G ++KA  +   ++   + P + TYN +I G C A    +   LF  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+P+VV ++ ++   C+ G  EEA  L + M + G  PN+  YNTL+      G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 182 NRAKELFVSMESMGCKHNVFSYSILIN 208
             + EL   M S G   +  +  ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
           A  +F ++ + G  PN++TY+TL++GLC+ G    A+ +FE                MI 
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           G  + G V               KPD V Y T+I G C++G  ++A  L  +MK+    P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           +   YN++IR      D   +  L  EM   G   +  T  ++ + L  +G+++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  298 bits (762), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 154/403 (38%), Positives = 246/403 (61%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++ +  C  N  TY  +I+ LC+ G  I  L +F EMIN       +C P+ ++
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-----IC-PNVIV 116

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+++I+GLC+ G + +A  L  +M  + I  +V+TYNS+I   C      EA R F +M+
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+VVTF+ ++D L K GK++EA ++ ELMI+ G  PN   YN+L++G CL  +++
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G K +V SY+ LINGYC + + E A++L+ +M  + + P++ TY  L 
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L++  ++  A +LF+ MQ  G +     Y   +DGLCKNG I EA+++FR+L+ +K +
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             IR YS LI G+ ++ R + A E+F  +P   L+ ++VTYNIMI+ LC +GK+ +A  L
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F+ ME  G   D ++FN ++ G ++ N+  K +E L RM E+N
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 200/363 (55%), Gaps = 6/363 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++ + G + NVITY++LI+  CR G    A   F +M+   GE G++  PD V
Sbjct: 132 EAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV---GE-GIL--PDVV 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +TT+ID L K+G V +A ++   M  +   P++VTYNS++ G C  +  + A RLF  M
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++ +V++++ +++  C +GK EEA  L   M    + P+   Y  L+      GR+
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKELF +M+  G   ++ +Y++L++G CKN  IE A+ ++  + S   KP++  Y+ L
Sbjct: 306 RTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSIL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+F+  + E A ++FDE+   G+  +   Y   I+GLCK G ++EA  LF  +    C
Sbjct: 366 IGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGC 425

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  S++ +I G  +  +++ A E    +       +     ++++   AD +  +  +
Sbjct: 426 EQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPN 485

Query: 362 LFL 364
            FL
Sbjct: 486 NFL 488



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 178/332 (53%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P+ V  +T++ G+C EG V  A EL  +M       D++ Y  +I        +  A  
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M+ +    N  T+ +++D LCK+G   +  ++   MI +G+ PN  VY++L++G C
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G++  A  LF  M S G K NV +Y+ LI+  C+    + A   +S+M+ +GI P VV
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+ TL   L +  +V+ A+K+F+ M + G A +   Y + ++GLC +  +  A+ LF  +
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                ++D+ SY+ LI+G C SG+ + A  LF  +    L   + TY I++ AL  +G++
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             A +LF +M+  G +P    +  L+ G  +N
Sbjct: 306 RTAKELFNNMQICGQSPSLDTYTVLLDGLCKN 337



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 151/281 (53%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G QPN+VT S ++  +C  GK+ +A +L + M + G + +  +Y  L++    T + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA EL   M S  C  N F+Y ++I+  CK+      L ++ EM++ GI P V+ Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++  A  LFDEM   G+ A+   Y + I   C+ G   EA   F  +     
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +++ LID L K G+++ A+++F  + +     ++VTYN +++ LC   +MD A  
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           LF  M  +G+  D +++NTL+ G   + +T + + L  +M 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G +PN    +TL+ G C  G+V  A ELF  M   G + ++  Y  LIN   K ++   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L+  MLS+       TY  +   L +     +  K+F EM   G+  +   Y + I+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LC+ G + EA+ LF  +     + ++ +Y+ LI   C+ G  K A   F  +    ++ D
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVT+  +I  L   GK+ +A+ +F  M  +G AP+ V +N+L+ G   +++    V L  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 400 RMDER 404
            M ER
Sbjct: 244 VMVER 248


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  297 bits (760), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+PN++TY  ++NGLC+ G T +ALNL  +M     E       D V
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVV 223

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+ TIID LCK   VD A  L  +M+ K I P+VVTY+S+I   C     ++A +L  +M
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 283

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+VTF+ ++D   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++AK++F  M S  C  +V +Y+ LI G+CK+K +E    L+ EM  +G+    VTY TL
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  Y+ +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A+ 
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G  P+ IT++TLI+GL        A+ L + M+         C+P+ V
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G  D A  LL +M+   I  DVV +N++I   C     ++A  LF EM
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +ASQLL  MI+  + PN   +N L+D F   G+ 
Sbjct: 249 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 308

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+Y+ L+NG+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ V +NT++ G        +   LL +M E
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 196/383 (51%), Gaps = 6/383 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY+ LIN  CR     +AL L  +M+    E      P  V  +++++G C    +  A 
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAV 137

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L+ QM +    PD +T+ ++I G    N ++EA  L   M+ +G QPN+VT+ V+++ L
Sbjct: 138 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 197

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G  + A  LL  M    +  +  ++NT++D  C    V+ A  LF  ME+ G + NV
Sbjct: 198 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 257

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +YS LI+  C       A  L S+M+ K I P +VT+N L     +  +   A KL+D+
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M +  +  D + Y + ++G C +  + +A ++F  +    C  D+ +Y+ LI G CKS R
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++   ELF  +    L+ D VTY  +I  L  DG  D A  +F  M + GV PD + ++ 
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G   N +  K +E+   M +
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQK 460



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 4/359 (1%)

Query: 50  GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
           G FG + K    P  V +  ++  + K    D    L  +M+   I   + TYN +I  F
Sbjct: 33  GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 92

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C  +  + A  L  +MM  G +P++VT S +++  C   ++ +A  L++ M+++G RP+ 
Sbjct: 93  CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 152

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G  L  + + A  L   M   GC+ N+ +Y +++NG CK  + + AL+L ++
Sbjct: 153 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 212

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M +  I+  VV +NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G 
Sbjct: 213 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 272

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             +A +L   +   K   ++ +++ LID   K G+   A +L+  + +  +  D+ TYN 
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +++  C   ++DKA  +F  M +K   PD V +NTL+ G  ++       EL   M  R
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 391



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 141/241 (58%), Gaps = 6/241 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+  +     +P++ TY++L+NG C       A  +FE M++ +      C PD 
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 362

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V+   EL  +M  + +  D VTY ++I+G  +  D + A+++F +
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LC NGK+E+A ++ + M +  ++ + ++Y T+++G C  G+
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P   TYNT
Sbjct: 483 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 542

Query: 241 L 241
           L
Sbjct: 543 L 543



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 152/308 (49%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   +    ++A  LF  M+     P++V F+ ++  + K  K +    L E M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++ +    + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +P  +T+ TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLCK G    AL L   +   K E D+  ++ +ID LCK   +  A  LF  +    + 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +VVTY+ +I  LC+ G+   A  L  DM  K + P+ V FN L+   ++  +  +  +L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 398 LHRMDERN 405
              M +R+
Sbjct: 315 YDDMIKRS 322


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  297 bits (760), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 234/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY T++NGLC+ G   +AL+L ++M  G  E       D V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK   +D A  L  +M +K I PDV TY+S+I   C     ++A RL  +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTFS ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +YS LI G+CK K +E  + L+ EM  +G+    VTY TL
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    + A  +F +M   GV  +   Y   +DGLCKNG + +A+ +F  L+    
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y+ +I+G+CK+G+++  WELF +L    +  +V+ YN MI   C  G  ++A  
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+  G  P+   +NTL+   +R+ +     EL+  M
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599



 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 229/402 (56%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G +P+  T++TLI+GL        A+ L ++M+         C+PD V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK G +D A  LL +M+   I  DVV YN++I G C     ++A  LF EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+V T+S ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTY+TL
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM + G+  +T  Y T I G  +      A  +F+ +  +  
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+DGLCK+G+L  A  +F  L R  +  D+ TYNIMI  +C  GK++   +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF ++  KGV+P+ +A+NT++ G  R     +   LL +M E
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 208/399 (52%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   ++ TYS  IN  CR     +AL +  +M+    E      PD V  +
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLS 157

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    +  A  L+ QM +    PD  T+ ++I G    N ++EA  L  +M+ +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++VT+  +++ LCK G ++ A  LL+ M +  +  +  +YNT++DG C    ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  M++ G + +VF+YS LI+  C       A  L S+M+ + I P VVT++ L   
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KL+DEM +  +  D + Y + I+G C +  + EA  +F  +    C  +
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS LI G CK+ R++   ELF  + +  L+ + VTY  +IH        D A  +F 
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
            M + GV P+ + +N L+ G  +N + +K   V E L R
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + K    +    L  QM+   I+ D+ T
Sbjct: 67  AVDLFGDMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+  I  FC  +  + A  +  +MM  G +P++VT S +++  C + ++ +A  L++ M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+ F + TL+ G  L  + + A  L   M   GC+ ++ +Y  ++NG CK  +I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+  VV YNT+  GL +   ++ A  LF EM   G+  D + Y + I
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +I+  C   ++D+A  +F  M +K   P+ V ++TL+ G  +     + +EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420

Query: 398 LHRMDER 404
              M +R
Sbjct: 421 FREMSQR 427



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 6/270 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 398

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I G CK   V++  EL  +M  + +  + VTY ++I GF  A D + A+ +F +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T+++++D LCKNGK+ +A  + E + +  + P+ + YN +++G C  G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    ELF ++   G   NV +Y+ +I+G+C+    E A SL  +M   G  P   TYNT
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDA 608



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 171/330 (51%), Gaps = 3/330 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VD A +L   M      P +V +N ++      N       L  +M   G+  ++ T+S+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++  C+  ++  A  +L  M+++G  P+    ++L++G+C + R++ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K + F+++ LI+G   + +   A++L  +M+ +G +P +VTY T+  GL +   ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L  +M++  + AD   Y T IDGLCK  ++ +AL LF  +       D+ +YS LI  L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR   A  L   +    +  +VVT++ +I A   +GK+ +A  L+ +M  + + PD 
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 376 VAFNTLMLG-CI--RNNETSKVVELLHRMD 402
             +++L+ G C+  R +E   + EL+   D
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKD 393



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 151/294 (51%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V F+ ++  + K  K E    L E M  +G+  + + Y+  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G + ++ + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP   T+ TL  GLF  ++   A  L D+M + G   D   Y T ++GLCK G I  AL 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y+ +IDGLCK   +  A  LF  +    +  DV TY+ +I  LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + P+ V F+ L+   ++  +  +  +L   M +R+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 25/315 (7%)

Query: 114 AKRLFIEMMDQGV--QPNVVTF---------------------SVIMDELCKNGKMEEAS 150
           AKRLF+    QG+   P V +F                      ++ + L    K+++A 
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            L   M++    P+   +N L+       +      L   M+++G  H++++YSI IN +
Sbjct: 69  DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++  AL++ ++M+  G +P +VT ++L  G     ++  A  L D+M   G   DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           + + T I GL  +    EA+ L   +    C+ D+ +Y  +++GLCK G + +A  L   
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN-N 389
           + +G + ADVV YN +I  LC    MD A +LF +M+ KG+ PD   +++L + C+ N  
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL-ISCLCNYG 307

Query: 390 ETSKVVELLHRMDER 404
             S    LL  M ER
Sbjct: 308 RWSDASRLLSDMIER 322



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  +F  + +  C PNV+TYSTLI G C+       + LF EM               I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 47  NG--------NGEF------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +G        N +        V   P+ + Y  ++DGLCK G + KA  +   ++   + 
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+ TYN +I G C A    +   LF  +  +GV PNV+ ++ ++   C+ G  EEA  L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           L+ M + G  PN+  YNTL+      G    + EL   M S G   +  +  ++ N
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
           A  +F ++ + G  PN++TY+ L++GLC+ G    A+ +FE                MI 
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           G  + G V                P+ + Y T+I G C++G  ++A  LL +MK+    P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           +  TYN++IR      D   +  L  EM   G   +  T  ++ + L  +G+++++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+PN++TY  ++NGLC+ G T +ALNL  +M     E       D V
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVV 261

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+ TIID LCK   VD A  L  +M+ K I P+VVTY+S+I   C     ++A +L  +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+VTF+ ++D   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++AK++F  M S  C  +V +Y+ LI G+CK+K +E    L+ EM  +G+    VTY TL
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  Y+ +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A+ 
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G  P+ IT++TLI+GL        A+ L + M+         C+P+ V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G  D A  LL +M+   I  DVV +N++I   C     ++A  LF EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +ASQLL  MI+  + PN   +N L+D F   G+ 
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+Y+ L+NG+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ V +NT++ G        +   LL +M E
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 196/383 (51%), Gaps = 6/383 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY+ LIN  CR     +AL L  +M+    E      P  V  +++++G C    +  A 
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAV 175

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L+ QM +    PD +T+ ++I G    N ++EA  L   M+ +G QPN+VT+ V+++ L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G  + A  LL  M    +  +  ++NT++D  C    V+ A  LF  ME+ G + NV
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +YS LI+  C       A  L S+M+ K I P +VT+N L     +  +   A KL+D+
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M +  +  D + Y + ++G C +  + +A ++F  +    C  D+ +Y+ LI G CKS R
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++   ELF  +    L+ D VTY  +I  L  DG  D A  +F  M + GV PD + ++ 
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G   N +  K +E+   M +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQK 498



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 4/359 (1%)

Query: 50  GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
           G FG + K    P  V +  ++  + K    D    L  +M+   I   + TYN +I  F
Sbjct: 71  GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C  +  + A  L  +MM  G +P++VT S +++  C   ++ +A  L++ M+++G RP+ 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G  L  + + A  L   M   GC+ N+ +Y +++NG CK  + + AL+L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M +  I+  VV +NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G 
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             +A +L   +   K   ++ +++ LID   K G+   A +L+  + +  +  D+ TYN 
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +++  C   ++DKA  +F  M +K   PD V +NTL+ G  ++       EL   M  R
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 141/241 (58%), Gaps = 6/241 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+  +     +P++ TY++L+NG C       A  +FE M++ +      C PD 
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 400

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V+   EL  +M  + +  D VTY ++I+G  +  D + A+++F +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LC NGK+E+A ++ + M +  ++ + ++Y T+++G C  G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P   TYNT
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580

Query: 241 L 241
           L
Sbjct: 581 L 581



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 152/308 (49%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   +    ++A  LF  M+     P++V F+ ++  + K  K +    L E M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++ +    + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +P  +T+ TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLCK G    AL L   +   K E D+  ++ +ID LCK   +  A  LF  +    + 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +VVTY+ +I  LC+ G+   A  L  DM  K + P+ V FN L+   ++  +  +  +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 398 LHRMDERN 405
              M +R+
Sbjct: 353 YDDMIKRS 360


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  296 bits (759), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/394 (40%), Positives = 238/394 (60%), Gaps = 8/394 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+ A G + + ++Y+TL+NGLC+ G T  AL L   MI          +P+ V+Y TIID
Sbjct: 105 KVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR-MIEDRS-----TRPNVVMYNTIID 158

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+  V++A +L  +M  + I P+V+TY+++I GFC A    EA  L  EM+ + + P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV T++++MD LCK GK++EA  LL +M + GV+PN   YNTLMDG+CL G V  AK++F
Sbjct: 219 NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF 278

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
            +M   G   NV+SY+I+I+  CK+K ++ A++L  E+L K + P  VTY++L  G  ++
Sbjct: 279 HTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKL 338

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A  L  EM   G  AD   Y + +D LCKN  + +A  LF  ++    + +  +Y
Sbjct: 339 GRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTY 398

Query: 309 SCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           + LIDGLCK GR K A +LF H L +G  I +V TYN+MI  LC +G +D+A  +   ME
Sbjct: 399 TALIDGLCKGGRHKNAQKLFQHLLVKGCRI-NVWTYNVMISGLCKEGMLDEALAMKSKME 457

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G  PD V F  ++      ++  K  +LLH M
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 209/399 (52%), Gaps = 11/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++     PNV+ Y+T+I+GLC+      A +L+ EM +  G F     P+ + 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIF-----PNVIT 187

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+I G C  G + +A  LL +M  KNINP+V TY  ++   C      EAK L   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV+PNVV+++ +MD  C  G+++ A Q+   M+Q GV PN + YN ++D  C + RV+
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   +       N  +YS LI+G+CK   I  AL L  EM  +G    VVTY +L 
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   +++A  LF +M+  G+  + + Y   IDGLCK G    A +LF+ L +  C 
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +++ +Y+ +I GLCK G L  A  +   +     I D VT+ I+I +L    + DKA  L
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M    +A D + F     G    NE  K  +LLH M
Sbjct: 488 LHEM----IAKDLLRFRDFH-GERSPNENDKAEKLLHEM 521



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 203/370 (54%), Gaps = 11/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L++++ A G  PNVITYSTLI G C  G  + A  L  EMI  N        P+  
Sbjct: 168 EAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN------INPNVY 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D LCKEG V +AK LL  M  + + P+VV+YN+++ G+C   +   AK++F  M
Sbjct: 222 TYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV PNV ++++++D LCK+ +++EA  LL  ++   + PN   Y++L+DGFC  GR+
Sbjct: 282 VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRI 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   +V +Y+ L++  CKN+ ++ A +L+ +M  +GI+P   TY  L
Sbjct: 342 TSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + + A KLF  +   G   + W Y   I GLCK G + EAL +   +    C
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGC 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  ++  +I  L +  +   A +L H +    +  D++ +    H   +  + DKA  
Sbjct: 462 IPDAVTFEIIIRSLFEKDQNDKAEKLLHEM----IAKDLLRFRD-FHGERSPNENDKAEK 516

Query: 362 LFLDMEAKGV 371
           L  +M AKG+
Sbjct: 517 LLHEMIAKGL 526



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 8/389 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P ++ ++ ++  L +  H   A++LF++M + G        +PD      +I+  C  G 
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKG-------IEPDLFTLNILINCFCHLGQ 60

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  +  +L ++      P+ +T N++++G C   +  ++     +++ QG Q + V+++ 
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LCK G+   A +LL ++     RPN  +YNT++DG C    VN A +L+  M++ G
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +YS LI G+C   ++  A  L +EM+ K I P V TY  L   L +  +V+ A 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L   M + GV  +  +Y T +DG C  G +  A ++F T+       ++ SY+ +ID L
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CKS R+  A  L   +    ++ + VTY+ +I   C  G++  A DL  +M  +G   D 
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V + +L+    +N    K   L  +M ER
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKER 389



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 33/305 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC---- 56
           MEA  L  ++      PNV TY+ L++ LC+ G    A NL   M     +  VV     
Sbjct: 202 MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTL 261

Query: 57  -------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                     P+   Y  +ID LCK   VD+A  LL ++  KN+
Sbjct: 262 MDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM 321

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P+ VTY+S+I GFC       A  L  EM  +G   +VVT++ ++D LCKN  +++A+ 
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATA 381

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   M + G++PN + Y  L+DG C  GR   A++LF  +   GC+ NV++Y+++I+G C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLC 441

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   ++ AL++ S+M   G  P  VT+  +   LFE  Q ++A KL  EM    +A D  
Sbjct: 442 KEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM----IAKDLL 497

Query: 272 AYRTF 276
            +R F
Sbjct: 498 RFRDF 502



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 35/284 (12%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P    +N ++           A  LF  M+  G + ++F+ +ILIN +C   +
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  + ++  ++L  G +P  +T NTL  GL    +V+++    D++   G   D  +Y T
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRG 334
            ++GLCK G    AL+L R +       ++  Y+ +IDGLCK   +  A++L+  +  RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 335 VLI----------------------------------ADVVTYNIMIHALCADGKMDKAH 360
           +                                     +V TY I++ ALC +GK+ +A 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +L   M  +GV P+ V++NTLM G     E     ++ H M ++
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/402 (39%), Positives = 235/402 (58%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G +P+  T++TLI GLC  G    AL+LF++MI G G      +P+ V 
Sbjct: 99  AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI-GEG-----FQPNVVT 152

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK+  V +A  +  +M  K I+P++VTYNS+I G C   +      L  EM+
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D  + P+V T + ++D LCK G + EA  ++++MI  GV PN   YN LMDG CL   V+
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P  VTYNTL 
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +     +
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI+ Y+ ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F +M   G +P+   +N +  G +RNNE  + +ELL  M  R
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494



 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/367 (37%), Positives = 205/367 (55%), Gaps = 19/367 (5%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L T++ +FG  P+V T + LIN  C       A ++  +++    + G   +PD V Y 
Sbjct: 602 SLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL----KLGF--QPDVVTYG 655

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+++GLCK             M  K I+PD+ TYNS+I   C   +      L  EM++ 
Sbjct: 656 TLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 702

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNVV FS ++D LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   ++ A
Sbjct: 703 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 762

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+    VTYNTL  G
Sbjct: 763 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     + D
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I  Y+  IDG+C++G L+ A +LF +L    L  DV TYNIMIH LC  G +D+A+ LF 
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942

Query: 365 DMEAKGV 371
            M+   +
Sbjct: 943 KMDENDI 949



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  ++ +FG  P+V T + +IN LC       A +   +++    +      PDA  +T
Sbjct: 66  SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ------PDATTFT 119

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC EG + +A  L  +M  +   P+VVTY ++I G C      EA  +F EM+ +
Sbjct: 120 TLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITK 179

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN+VT++ ++  LCK  + +  + L+  M+   + P+ F  NT++D  C  G V  A
Sbjct: 180 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 239

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ++   M   G + NV +Y+ L++G+C   E++ A+ ++  M+ K     V++YNTL  G
Sbjct: 240 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +I  V++A  LF+EM R  +  +T  Y T I GLC  G + +A+ LF  +       D
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y  L D LCK+  L  A  L  ++       D+  Y  ++  +C  G+++ A DLF 
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++ +KG+ P+   +N ++ G  +    ++  +L   M++
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 209/395 (52%), Gaps = 7/395 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G +PNV+TY TLINGLC+      A N+F EMI      G+   P+ V
Sbjct: 133 EALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITK----GI--SPNIV 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK         L+ +M D  I PDV T N+V+   C      EA  +   M
Sbjct: 187 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+PNVVT++ +MD  C   +++ A ++ + M+      N   YNTL++G+C    V
Sbjct: 247 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF  M       N  +Y+ LI+G C    ++ A+SL+ EM+++G  P +VTY TL
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   +++A  L   ++      D   Y T +DG+C+ G + +A +LF  L     
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y+ +I GLCK G L  A +LF  + +     +  TYN++      + +  +  +
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           L  +M A+G + D V+  TL++G + ++   + V+
Sbjct: 487 LLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVK 520



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 204/404 (50%), Gaps = 19/404 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P+ + ++ L+  + +  H    L+L  +M      FG+   PD  
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 617

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L ++      PDVVTY +++ G C             +M
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KM 664

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P++ T++ ++  LC   + +  + LL  M+   + PN  V++T++D  C  G +
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M   G + +V +Y+ L++G+C   E++ A+ ++  M+ KG  P V +YN L
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I ++++A  L ++M   G+ ADT  Y T I GLC  G +  A+ LF  +     
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y  L+D LCK+  L  A  L  ++    L AD++ YNI I  +C  G+++ A D
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF ++ +KG+ PD   +N ++ G  +     +  +L  +MDE +
Sbjct: 905 LFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 175/329 (53%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A     +M  K   P  V +N ++         +    L  +M   G+ P+V T ++
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC   +++ A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK++++  A +++SEM++KGI P +VTYN+L  GL ++ + +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L +EM    +  D +   T +D LCK G + EA ++   +     E ++ +Y+ L+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C    + +A ++F ++     +A+V++YN +I+  C    +DKA  LF +M  + + P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V +NTL+ G          + L H M  R
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVAR 354



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 175/368 (47%), Gaps = 6/368 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M++          P  V +  ++  + K         L  QM    I PDV T
Sbjct: 29  ALSTFNRMLHKQP------PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 82

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              VI   C+ N  + A     +++  G QP+  TF+ ++  LC  GK+ EA  L + MI
Sbjct: 83  LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   Y TL++G C   +V  A  +F  M + G   N+ +Y+ LI+G CK  E +
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
              +L +EM+   I P V T NT+   L +   V  A  + D M   GV  +   Y   +
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           DG C    +  A+++F T+    C  ++ SY+ LI+G CK   +  A  LF  + R  L 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + VTYN +IH LC  G++  A  LF +M A+G  PD V + TL     +N    K + L
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 398 LHRMDERN 405
           L  ++  N
Sbjct: 383 LKAIEGSN 390



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 202/441 (45%), Gaps = 47/441 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF+++   GC PN  TY+ +  G  R    +  + L EEM+     F V      V
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG--FSV-----DV 500

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC------------YAN 109
             TT++ G+  +  +D++ + +L     +  P      S+   F             + N
Sbjct: 501 STTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFN 560

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAF 166
             ++A   F  M+     P+ V F+ ++  +    KM+  S +L L  Q+   G+ P+ +
Sbjct: 561 TLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDVY 617

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-------------N 213
             N L++ FC   R+  A  +   +  +G + +V +Y  L+NG CK             N
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYN 677

Query: 214 K---------EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                     E +   +L +EM++  I P VV ++T+   L +   +  A  + D M + 
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  D   Y   +DG C    + EA+++F T+    C  ++RSY+ LI+G C+  R+  A
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +    LIAD VTYN +IH LC  G++  A  LF +M A G  PD V +  L+  
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857

Query: 385 CIRNNETSKVVELLHRMDERN 405
             +N+  ++ + LL  ++  N
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSN 878



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 167/329 (50%), Gaps = 63/329 (19%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCR-----------TGHTIV-----------ALN 40
           A ++  KL   G +P+V+TY TL+NGLC+           T ++++              
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTT 694

Query: 41  LFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS 100
           L  EM+N          P+ V+++T++D LCKEG +  A +++  M  + + PDVVTY +
Sbjct: 695 LLNEMVNSK------IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           ++ G C  ++ +EA ++F  M+ +G  PNV +++++++  C+  +M++A  LLE M   G
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG---------------CKH------- 198
           +  +   YNTL+ G C  GR+  A  LF  M + G               CK+       
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868

Query: 199 -------------NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
                        ++  Y+I I+G C+  E+E A  L+S + SKG++P V TYN +  GL
Sbjct: 869 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            +   ++ A KLF +M  + + +++ + R
Sbjct: 929 CKRGLLDEANKLFRKMDENDIWSNSTSSR 957


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 148/400 (37%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+PNV+TY++++NG+C++G T +AL+L  +M   N       K D  
Sbjct: 153 EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN------VKADVF 206

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LC++G +D A  L  +M+ K I   +VTYNS++ G C A   N+  +L  +M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV+TF+V++D   K GK++EA++L + MI  G+ PN   YN+LMDG+C+  R+
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M    C  ++ +++ LI GYCK K ++  + L+ ++  +G+    VTY+ L
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++E A +LF EM   GV  D   Y   +DGLC NG + +ALE+F  L+  K 
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LDI  Y+ +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A+ 
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G  P+   +NTL+   +R+ + +   +L+  M
Sbjct: 507 LLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 222/401 (55%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+  T++TLINGLC       A+ L   M+  NG     C+P+ V 
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE-NG-----CQPNVVT 172

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I++G+CK G    A +LL +M ++N+  DV TY+++I   C     + A  LF EM 
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 232

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ ++VT++ ++  LCK GK  +  QLL+ M    + PN   +N L+D F   G++ 
Sbjct: 233 TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL+  M + G   N  +Y+ L++GYC    +  A ++   M+     P +VT+ +L 
Sbjct: 293 EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ +V+   KLF ++ + G+ A+T  Y   + G C++G +  A ELF+ +  L   
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+DGLC +G+L+ A E+F  L +  +  D+V Y I+I  +C  GK++ A +L
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV P+ + +  ++ G  +    S+   LL +M+E
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 198/401 (49%), Gaps = 41/401 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF+EMI           P  V ++    G+      +   +   +M+   I  ++ T
Sbjct: 49  AIDLFQEMIRSRP------LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N +I  FC    +  A  +  ++M  G +P+  TF+ +++ LC   K+ EA  L+  M+
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G +PN   YN++++G C +G  + A +L   M+    K +VF+YS +I+  C++  I+
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGL---------------------------FEI-- 248
            A+SL+ EM +KGIK ++VTYN+L  GL                           F +  
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 249 ------HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                  +++ A +L+ EM   G++ +T  Y + +DG C    + EA  +   +    C 
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +++ LI G CK  R+    +LF  + +  L+A+ VTY+I++   C  GK++ A +L
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F +M + GV PD + +  L+ G   N +  K +E+   + +
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 162/299 (54%), Gaps = 6/299 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNVIT++ LI+   + G    A  L++EMI      G+   P+ + Y +++DG C +  +
Sbjct: 273 PNVITFNVLIDVFVKEGKLQEANELYKEMITK----GI--SPNTITYNSLMDGYCMQNRL 326

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +L  M   N +PD+VT+ S+I+G+C     +E  +LF ++  +G+  N VT+S++
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C++GK+E A +L + M+ +GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++  Y+I+I G CK  ++E A +L+  +  KG+KP V+TY  +  GL +   +  A  
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           L  +M+  G   +   Y T I    ++G +  + +L   ++      D  S   +ID L
Sbjct: 507 LLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 159/308 (51%), Gaps = 3/308 (0%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V Y   +R        ++A  LF EM+     P++V FS     +    +        + 
Sbjct: 31  VCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKK 90

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  N +++ FC   +   A  +   +  +G + +  +++ LING C   +
Sbjct: 91  MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A+ L + M+  G +P VVTYN++  G+ +      A  L  +M    V AD + Y T
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID LC++G I  A+ LF+ +     +  + +Y+ L+ GLCK+G+     +L   +    
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETS 392
           +I +V+T+N++I     +GK+ +A++L+ +M  KG++P+ + +N+LM G C++N  +E +
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330

Query: 393 KVVELLHR 400
            +++L+ R
Sbjct: 331 NMLDLMVR 338


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 151/400 (37%), Positives = 239/400 (59%), Gaps = 6/400 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E GV+      
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL------ 871

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            IY TIIDGLCK   +D A  L  +M+ K I P+VVTY+S+I   C     ++A RL  +M
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +++ + P+V TFS ++D   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            + AK++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+    VTYN L
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            E  I +Y+ +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 1171

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF +M+  G  P+   +NTL+   +R+ +     EL+  M
Sbjct: 1172 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211



 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 225/375 (60%), Gaps = 7/375 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+ +T  +L+NG CR      A++L ++M+    E G   KPD V 
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 295

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  IID LCK   V+ A +   +++ K I P+VVTY +++ G C ++  ++A RL  +M+
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+T+S ++D   KNGK+ EA +L E M+++ + P+   Y++L++G CL  R++
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+    VTYNTL 
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +AL +F  ++  + +
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595

Query: 363 FLDMEAKGVAP-DCV 376
           +  M+ +G+   DC 
Sbjct: 596 YTKMKQEGLMKNDCT 610



 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 225/402 (55%), Gaps = 6/402 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA AL  ++   G +PN +T++TLI+GL        A+ L + M+         C+PD V
Sbjct: 783  EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG------CQPDLV 836

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +++GLCK G  D A  LL +M+   + P V+ YN++I G C     ++A  LF EM
Sbjct: 837  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 896

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G++PNVVT+S ++  LC  G+  +AS+LL  MI+  + P+ F ++ L+D F   G++
Sbjct: 897  ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 956

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A++L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 957  VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 1016

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ +     
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              +I +Y+ L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   D
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF ++  KGV PD VA+NT++ G  R     +   L   M E
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 9/399 (2%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            +L  +++  G   N  TYS LIN  CR     +AL +  +M+    E      P+ V  +
Sbjct: 716  SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLS 769

Query: 65   TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++++G C    + +A  L+ QM      P+ VT+N++I G    N ++EA  L   M+ +
Sbjct: 770  SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 125  GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            G QP++VT+ V+++ LCK G  + A  LL  M Q  + P   +YNT++DG C    ++ A
Sbjct: 830  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 185  KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              LF  ME+ G + NV +YS LI+  C       A  L S+M+ + I P V T++ L   
Sbjct: 890  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949

Query: 245  LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
              +  ++  A KL+DEM +  +      Y + I+G C +  + EA ++F  +    C  D
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 305  IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            + +Y+ LI G CK  R++   E+F  + +  L+ + VTYNI+I  L   G  D A ++F 
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 365  DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
            +M + GV P+ + +NTL+ G  +N +  K   V E L R
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 14/372 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  K+   G +P+++ Y+ +I+ LC+T     A + F+E I   G      +P+ V
Sbjct: 276 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKG-----IRPNVV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++GLC       A  LL  M  K I P+V+TY++++  F       EAK LF EM
Sbjct: 330 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++VT+S +++ LC + +++EA+Q+ +LM+  G   +   YNTL++GFC   RV
Sbjct: 390 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI P + TYN L
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ ++ GLC  G L     L+  + +  L+ +  T         +DG +  + +
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAE 621

Query: 362 LFLDMEAKGVAP 373
           L   M + G AP
Sbjct: 622 LIKKMLSCGYAP 633



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+     F     P  V +  ++  + K    D    L  +M+   I  D+ T
Sbjct: 172 AIDLFSDMVKSR-PF-----PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L++ M+
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D   Y + I
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +  I EA ++F  +    C  D+ SY+ LI+G CK+ R++   +LF  + +  L+
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           ++ VTYN +I      G +DKA + F  M+  G++PD   +N L+ G   N E  K + +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 398 LHRMDER 404
              M +R
Sbjct: 526 FEDMQKR 532



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 216/456 (47%), Gaps = 60/456 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F+++  FG  P++ TY+ L+ GLC  G    AL +FE+M     +       D V
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL------DIV 539

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G+CK G V++A  L   +  K + PD+VTY +++ G C     +E + L+ +M
Sbjct: 540 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599

Query: 122 MDQGVQPNVVTF----------------------SVIMD--------------------- 138
             +G+  N  T                       S++ D                     
Sbjct: 600 KQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTS 659

Query: 139 -----ELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
                +L +NG    K+++A  L   M++    P+   ++ L+       + +    L  
Sbjct: 660 YDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGE 719

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M+++G  HN ++YSILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     
Sbjct: 720 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 779

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++  A  L D+M   G   +T  + T I GL  +    EA+ L   +    C+ D+ +Y 
Sbjct: 780 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 839

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +++GLCK G   +A+ L + + +G L   V+ YN +I  LC    MD A +LF +ME K
Sbjct: 840 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 899

Query: 370 GVAPDCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
           G+ P+ V +++L + C+ N    S    LL  M ER
Sbjct: 900 GIRPNVVTYSSL-ISCLCNYGRWSDASRLLSDMIER 934



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 38   ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
            A+ LF EM+     F     P  + ++ ++  + K    D    L  QM++  I  +  T
Sbjct: 679  AVALFGEMVKSR-PF-----PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732

Query: 98   YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            Y+ +I  FC  +    A  +  +MM  G +PN+VT S +++  C + ++ EA  L++ M 
Sbjct: 733  YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 158  QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              G +PN   +NTL+ G  L  + + A  L   M + GC+ ++ +Y +++NG CK  + +
Sbjct: 793  VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 218  GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             A +L ++M    ++P V+ YNT+  GL +   ++ A  LF EM+  G+  +   Y + I
Sbjct: 853  LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 278  DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
              LC  G   +A  L   +   K   D+ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 913  SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972

Query: 338  ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              +VTY+ +I+  C   ++D+A  +F  M +K   PD V +NTL+ G  +     + +E+
Sbjct: 973  PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 398  LHRMDER 404
               M +R
Sbjct: 1033 FREMSQR 1039



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L+ ++     +P+++TYS+LING C       A  +FE M++ +      C PD 
Sbjct: 957  VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 1010

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V Y T+I G CK   V++  E+  +M  + +  + VTYN +I+G   A D + A+ +F E
Sbjct: 1011 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 1070

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P  + YN +++G C  G+
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 1131 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 1190

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            L          E + +L  EM+  G A D 
Sbjct: 1191 LIRARLRDGDREASAELIKEMRSCGFAGDA 1220



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 203/421 (48%), Gaps = 29/421 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++     +P+++TYS+LINGLC       A  +F+ M++        C  D 
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 433

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   V+   +L  +M  + +  + VTYN++I+GF  A D ++A+  F +
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ T+++++  LC NG++E+A  + E M +  +  +   Y T++ G C TG+
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+     T + 
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613

Query: 241 LFIGLF-----EIHQVERAFKLFDEMQ-----------RHGVAADTWAYRTFIDGLCKNG 284
             I L      ++     A  L  +++           R      ++ YR   + L +NG
Sbjct: 614 GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYR---EKLSRNG 670

Query: 285 Y----IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
                + +A+ LF  +   +    I  +S L+  + K  +  +   L   +    +  + 
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            TY+I+I+  C   ++  A  +   M   G  P+ V  ++L+ G   +   S+ V L+ +
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790

Query: 401 M 401
           M
Sbjct: 791 M 791



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 155/293 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+A  LF +M+     P++V F+ ++  + K  K +    L + M  +G+R + + +N +
Sbjct: 170 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 229

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +V+ A  +   M  +G + +  +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP +V YN +   L +  +V  AF  F E++R G+  +   Y   ++GLC +    +A  
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K   ++ +YS L+D   K+G++  A ELF  + R  +  D+VTY+ +I+ LC
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A+ +F  M +KG   D V++NTL+ G  +       ++L   M +R
Sbjct: 410 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+ +A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +P  VT  +L  G    ++V  A  L D+M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++ +Y+ L++GLC S R   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +  +  +V+TY+ ++ A   +GK+ +A +LF +M    + PD V +++L+ G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 385 -CI--RNNETSKVVELL 398
            C+  R +E +++ +L+
Sbjct: 408 LCLHDRIDEANQMFDLM 424



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   +F ++   G   N +TY+ LI GL + G   +A  +F+EM++     GV   P+ +
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 1081

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y T++DGLCK G ++KA  +   ++   + P + TYN +I G C A    +   LF  +
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 1141

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +GV+P+VV ++ ++   C+ G  EEA  L + M + G  PN+  YNTL+      G  
Sbjct: 1142 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 1201

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              + EL   M S G   +  +  ++ N
Sbjct: 1202 EASAELIKEMRSCGFAGDASTIGLVTN 1228



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 108/222 (48%)

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+  + T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +A+ L   +  +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + DI +Y+ +ID LCK+ R+  A++ F  + R  +  +VVTY  +++ LC   +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  DM  K + P+ + ++ L+   ++N +  +  EL   M
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
            A  +F ++ + G  PN++TY+TL++GLC+ G    A+ +FE                MI 
Sbjct: 1064 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 1123

Query: 48   GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            G  + G V               KPD V Y T+I G C++G  ++A  L  +MK+    P
Sbjct: 1124 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 1183

Query: 94   DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            +   YN++IR      D   +  L  EM   G   +  T  ++ + L  +G+++++
Sbjct: 1184 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 1238


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/400 (37%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E      P  +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVL 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK   +D A  L  +M+ K I P+VVTY+S+I   C     ++A RL  +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+V TFS ++D   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+    VTYN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  I +Y+ +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M+  G  P+   +NTL+   +R+ +     EL+  M
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 143/402 (35%), Positives = 225/402 (55%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +PN +T++TLI+GL        A+ L + M+         C+PD V
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG------CQPDLV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G  D A  LL +M+   + P V+ YN++I G C     ++A  LF EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +AS+LL  MI+  + P+ F ++ L+D F   G++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ +     
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   D
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF ++  KGV PD VA+NT++ G  R     +   L   M E
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   N  TYS LIN  CR     +AL +  +M+    E      P+ V  +
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE------PNIVTLS 155

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    + +A  L+ QM      P+ VT+N++I G    N ++EA  L   M+ +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++VT+ V+++ LCK G  + A  LL  M Q  + P   +YNT++DG C    ++ A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME+ G + NV +YS LI+  C       A  L S+M+ + I P V T++ L   
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KL+DEM +  +      Y + I+G C +  + EA ++F  +    C  D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI G CK  R++   E+F  + +  L+ + VTYNI+I  L   G  D A ++F 
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
           +M + GV P+ + +NTL+ G  +N +  K   V E L R
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+ LF EM+           P  + ++ ++  + K    D    L  QM++  I  +  T
Sbjct: 65  AVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+ +I  FC  +    A  +  +MM  G +PN+VT S +++  C + ++ EA  L++ M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   +NTL+ G  L  + + A  L   M + GC+ ++ +Y +++NG CK  + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L ++M    ++P V+ YNT+  GL +   ++ A  LF EM+  G+  +   Y + I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC  G   +A  L   +   K   D+ ++S LID   K G+L  A +L+  + +  + 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             +VTY+ +I+  C   ++D+A  +F  M +K   PD V +NTL+ G  +     + +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 398 LHRMDER 404
              M +R
Sbjct: 419 FREMSQR 425



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P+++TYS+LING C       A  +FE M++ +      C PD 
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  E+  +M  + +  + VTYN +I+G   A D + A+ +F E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P  + YN +++G C  G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 145/294 (49%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ FS ++  + K  K +    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + N+ + S L+NGYC +K I  A++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P  VT+NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E  +  Y+ +IDGLCK   +  A  LF  +    +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  DM  + + PD   F+ L+   ++  +  +  +L   M +R+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 168/326 (51%), Gaps = 3/326 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L  +M      P ++ ++ ++      N  +    L  +M + G+  N  T+S+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  ++  A  +L  M+++G  PN    ++L++G+C + R++ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M++KG +P +VTY  +  GL +    + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L ++M++  +      Y T IDGLCK  ++ +AL LF+ +       ++ +YS LI  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR   A  L   +    +  DV T++ +I A   +GK+ +A  L+ +M  + + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 376 VAFNTLMLG-CI--RNNETSKVVELL 398
           V +++L+ G C+  R +E  ++ E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFM 387



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 6/272 (2%)

Query: 138 DELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++L +NG    K+++A  L   M++    P+   ++ L+       + +    L   M++
Sbjct: 50  EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G  HN ++YSILIN +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L D+M   G   +T  + T I GL  +    EA+ L   +    C+ D+ +Y  +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK G   +A+ L + + +G L   V+ YN +I  LC    MD A +LF +ME KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289

Query: 374 DCVAFNTLMLGCIRN-NETSKVVELLHRMDER 404
           + V +++L + C+ N    S    LL  M ER
Sbjct: 290 NVVTYSSL-ISCLCNYGRWSDASRLLSDMIER 320



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +F ++   G   N +TY+ LI GL + G   +A  +F+EM++     GV   P+ +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++DGLCK G ++KA  +   ++   + P + TYN +I G C A    +   LF  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+P+VV ++ ++   C+ G  EEA  L + M + G  PN+  YNTL+      G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 182 NRAKELFVSMESMGCKHNVFSYSILIN 208
             + EL   M S G   +  +  ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 30/176 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
           A  +F ++ + G  PN++TY+TL++GLC+ G    A+ +FE                MI 
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           G  + G V               KPD V Y T+I G C++G  ++A  L  +MK+    P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           +   YN++IR      D   +  L  EM   G   +  T  ++ + L  +G+++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  295 bits (755), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/400 (36%), Positives = 238/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   GC+P+++TY++++NG+CR+G T +A ++  +M   N       K D  
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN------VKADVF 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TIID LC++G +D A  L  +M+ K I   VVTYNS++RG C A   N+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV+TF+V++D   K GK++EA++L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+    VTY+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +ALE+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L I  Y+ +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A+ 
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G AP+   +NTL+   +R+ + +   +L+  M
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 221/401 (55%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+  T++TLINGLC  G    A+ L + M+  NG     C+PD V 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE-NG-----CQPDMVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I++G+C+ G    A ++L +M+++N+  DV TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VVT++ ++  LCK GK  + + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     P +VT+ +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV P+ + +  ++ G  +    S+   LL +M+E
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 211/406 (51%), Gaps = 14/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A ALF ++      P ++ +S   + + RT    + L+  +++ +NG            
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN-------- 122

Query: 61  VIYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            IYT   +I+  C+      A  +L ++      PD  T+N++I G C     ++A  L 
Sbjct: 123 -IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M++ G QP++VT++ I++ +C++G    A  +L  M +  V+ + F Y+T++D  C  
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVT 237
           G ++ A  LF  ME+ G K +V +Y+ L+ G CK  K  +GAL L  +M+S+ I P V+T
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVIT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L     +  +++ A +L+ EM   G++ +   Y T +DG C    + EA  +   + 
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             KC  DI +++ LI G C   R+    ++F ++ +  L+A+ VTY+I++   C  GK+ 
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF +M + GV PD + +  L+ G   N +  K +E+   + +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 158/299 (52%), Gaps = 6/299 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNVIT++ L++   + G    A  L++EMI      G+   P+ + Y T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +L  M     +PD+VT+ S+I+G+C     ++  ++F  +  +G+  N VT+S++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C++GK++ A +L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP V+TY  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++      D  S   +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 154/292 (52%), Gaps = 3/292 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P +V FS     + +  +        + +   G+  N +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +   A  +   +  +G + +  +++ LING C   ++  A+ L   M+  G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P +VTYN++  G+        AF +  +M+   V AD + Y T ID LC++G I  A+ 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +     +  + +Y+ L+ GLCK+G+      L   +    ++ +V+T+N+++    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVELLHR 400
            +GK+ +A++L+ +M  +G++P+ + +NTLM G C++N  +E + +++L+ R
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 127/260 (48%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L + MI+    P    ++        T + N   +    +E  G  HN+++ +
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+  +   A S+  +++  G +P   T+NTL  GL    +V +A  L D M  +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y + ++G+C++G    A ++ R +     + D+ +YS +ID LC+ G +  A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    + + VVTYN ++  LC  GK +    L  DM ++ + P+ + FN L+  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 385 CIRNNETSKVVELLHRMDER 404
            ++  +  +  EL   M  R
Sbjct: 308 FVKEGKLQEANELYKEMITR 327



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G+ +I + + A  LF EM R         +  F   + +       L+  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I + + +I+  C+  +   A+ +   + +     D  T+N +I+ LC +GK+ KA  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M   G  PD V +N+++ G  R+ +TS   ++L +M+ERN
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 152/415 (36%), Positives = 240/415 (57%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P+ ITY T ++G+C+ G T+ ALNL  +M     E     KP+ 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM-----EEISHIKPNV 253

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGLCK+G    +  L ++M+DK I P++VTYN +I GFC +   + A+RL  E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNVVT++ +++   K GK  EA++L + M+  G+ PN   YN+++DGFC   R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+    VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+ +Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F+ M +K  +P+ V FNTL+ G  +       +EL   M  R
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 231/416 (55%), Gaps = 22/416 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C P+V+T++TL+NGLCR G  + A+ L + M+  NG      +PD +
Sbjct: 169 EALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVE-NG-----LQPDQI 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y T +DG+CK G    A  LL +M++  +I P+VV Y+++I G C     +++  LFIE
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ PN+VT++ ++   C +G+   A +LL+ M++  + PN   YN L++ F   G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A EL+  M   G   N  +Y+ +I+G+CK   ++ A  ++  M +KG  P V T+ T
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM R G+ A+T  Y T I G C  G +  AL+L + +    
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----------PRGVLIADVVTYNIMIHA 349
              DI + + L+DGLC +G+LK A E+F ++           P   +  DV+TYNI+I  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 214/432 (49%), Gaps = 34/432 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A  LF+ +      P+VI ++ L+  + R     + ++L+++M                
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 50  -------------GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                          FG + K    PD V +TT++ GLC +  V +A +L  Q+      
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CR 179

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+T+ +++ G C      EA  L   M++ G+QP+ +T+   +D +CK G    A  L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 153 LELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L  M +I  ++PN  +Y+ ++DG C  GR + +  LF+ M+  G   N+ +Y+ +I G+C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +     A  L  EML + I P VVTYN L     +  +   A +L+DEM   G+  +T 
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + IDG CK   +  A ++F  +    C  D+ +++ LIDG C + R+    EL H +
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           PR  L+A+ VTYN +IH  C  G ++ A DL   M + GV PD V  NTL+ G   N + 
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 392 SKVVELLHRMDE 403
              +E+   M +
Sbjct: 480 KDALEMFKAMQK 491



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 161/347 (46%), Gaps = 52/347 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L+ ++   G  PN ITY+++I+G C+      A ++F  M          C PD  
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 394

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +TT+IDG C    +D   ELL +M  + +  + VTYN++I GFC   D N A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  GV P++VT + ++D LC NGK++                                  
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    + Y TL  G  ++  +  A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            +F EM   GV  DT   R  + G      +  A+ +   L+  + E
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +E+A  L   M++    P+   +N LM       R +    L+  ME    + +++S++I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G+ P VVT+ TL  GL   H+V  A  LF ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   + T ++GLC+ G +VEA+ L   +     + D  +Y   +DG+CK G    A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 326 ELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            L   +     I  +VV Y+ +I  LC DG+   +H+LF++M+ KG+ P+ V +N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 385 CIRNNETSKVVELLHRMDER 404
              +   S    LL  M ER
Sbjct: 298 FCISGRWSAAQRLLQEMLER 317



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G  + K +E A+ L+S+ML     P+V+ +N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  L  L    D+ +++ L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LFH + R     DV+T+  +++ LC +G++ +A  L   M   G+ PD + + T + G 
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 228 CKMGDTVSALNLLRKMEE 245


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  294 bits (753), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 152/415 (36%), Positives = 240/415 (57%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P+ ITY T ++G+C+ G T+ ALNL  +M     E     KP+ 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM-----EEISHIKPNV 253

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGLCK+G    +  L ++M+DK I P++VTYN +I GFC +   + A+RL  E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNVVT++ +++   K GK  EA++L + M+  G+ PN   YN+++DGFC   R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+    VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+ +Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F+ M +K  +P+ V FNTL+ G  +       +EL   M  R
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 608



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 231/416 (55%), Gaps = 22/416 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C P+V+T++TL+NGLCR G  + A+ L + M+  NG      +PD +
Sbjct: 169 EALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVE-NG-----LQPDQI 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y T +DG+CK G    A  LL +M++  +I P+VV Y+++I G C     +++  LFIE
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ PN+VT++ ++   C +G+   A +LL+ M++  + PN   YN L++ F   G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A EL+  M   G   N  +Y+ +I+G+CK   ++ A  ++  M +KG  P V T+ T
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM R G+ A+T  Y T I G C  G +  AL+L + +    
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----------PRGVLIADVVTYNIMIHA 349
              DI + + L+DGLC +G+LK A E+F ++           P   +  DV+TYNI+I  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 214/432 (49%), Gaps = 34/432 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A  LF+ +      P+VI ++ L+  + R     + ++L+++M                
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 50  -------------GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                          FG + K    PD V +TT++ GLC +  V +A +L  Q+      
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CR 179

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+T+ +++ G C      EA  L   M++ G+QP+ +T+   +D +CK G    A  L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 153 LELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L  M +I  ++PN  +Y+ ++DG C  GR + +  LF+ M+  G   N+ +Y+ +I G+C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +     A  L  EML + I P VVTYN L     +  +   A +L+DEM   G+  +T 
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + IDG CK   +  A ++F  +    C  D+ +++ LIDG C + R+    EL H +
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           PR  L+A+ VTYN +IH  C  G ++ A DL   M + GV PD V  NTL+ G   N + 
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479

Query: 392 SKVVELLHRMDE 403
              +E+   M +
Sbjct: 480 KDALEMFKAMQK 491



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L+ ++   G  PN ITY+++I+G C+      A ++F  M          C PD  
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 394

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +TT+IDG C    +D   ELL +M  + +  + VTYN++I GFC   D N A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  GV P++VT + ++D LC NGK++                                  
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    + Y TL  G  ++  +  A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + G      +  A+ +   L++
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +E+A  L   M++    P+   +N LM       R +    L+  ME    + +++S++I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G+ P VVT+ TL  GL   H+V  A  LF ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   + T ++GLC+ G +VEA+ L   +     + D  +Y   +DG+CK G    A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 326 ELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            L   +     I  +VV Y+ +I  LC DG+   +H+LF++M+ KG+ P+ V +N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 385 CIRNNETSKVVELLHRMDER 404
              +   S    LL  M ER
Sbjct: 298 FCISGRWSAAQRLLQEMLER 317



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G  + K +E A+ L+S+ML     P+V+ +N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  L  L    D+ +++ L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LFH + R     DV+T+  +++ LC +G++ +A  L   M   G+ PD + + T + G 
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 228 CKMGDTVSALNLLRKMEE 245


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  294 bits (752), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 157/403 (38%), Positives = 233/403 (57%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G   N + Y TLINGLC+ G T  AL L   +       G + +P+ V
Sbjct: 144 QALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVV 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID +CK   V++A +L  +M  K I+PDVVTY+++I GFC     N+A  LF +M
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V TFS+++D  CK G+++EA  +L +M++ G++P+   Y +LMDG+CL  +V
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +F +M   G   NV SY+I+ING+CK K+++ A++L+ EM  K I P VVTYN+L
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ L   ++    
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ LIDGLCK GRLK A  +F  L        V TY +MI   C +   DKA  
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA 497

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  P+   +  ++L     +E     +LL  M  R
Sbjct: 498 LLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIAR 540



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 185/347 (53%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L K      A  L  +M+   I  D+VT+N +I  F     ++ +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G +PN +T + ++  LC  G++ +A    + ++ +G   N   Y TL++G C 
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+ + A +L   ++    + NV  Y+ +I+  CK K +  A  LYSEM+SKGI P VVT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ L  G   + ++  A  LF++M    +  D + +   +DG CK G + EA  +   + 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ +Y  L+DG C   ++  A  +F+++ +G + A+V +YNIMI+  C   K+D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A +LF +M  K + PD V +N+L+ G  ++ + S  ++L+  M +R
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 400



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 200/413 (48%), Gaps = 41/413 (9%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F ++      P +  +  ++  L +      A++L  EM     EF  +   D V +  +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREM-----EFNGIAS-DLVTFNIL 97

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I+   + G    +  +   +  K   P+ +T  ++I+G C     ++A     +++  G 
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD------------- 173
             N V +  +++ LCK G+   A QLL  +    V+PN  +YNT++D             
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 174 ----------------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
                                 GFC+ G++N A  LF  M S     +V+++SIL++G+C
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   ++ A ++ + M+ +GIKP VVTY +L  G   + QV +A  +F+ M + GV A+  
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +Y   I+G CK   + EA+ LF+ +       D+ +Y+ LIDGLCKSG++  A +L   +
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               +  D +TYN ++ ALC + ++DKA  L   M+ +G+ PD   +  L+ G
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 2/314 (0%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRL--FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           NP  +   S+     + +  +E   +  F  +++    P +  F  I+  L K    + A
Sbjct: 16  NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             L   M   G+  +   +N L++ F   G  + +  +F ++   G + N  + + LI G
Sbjct: 76  ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C   +I  AL  + ++++ G     V Y TL  GL ++ Q   A +L   +    V  +
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y T ID +CK   + EA +L+  +       D+ +YS LI G C  G+L  A  LF+
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    +  DV T++I++   C +G++ +A ++   M  +G+ PD V + +LM G     
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK 315

Query: 390 ETSKVVELLHRMDE 403
           + +K   + + M +
Sbjct: 316 QVNKAKSIFNTMAQ 329


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  293 bits (751), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 155/394 (39%), Positives = 237/394 (60%), Gaps = 8/394 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+ A G + + ++Y  L+NGLC+ G T  A+ L   + + +       +PD V+Y+TIID
Sbjct: 105 KVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS------TRPDVVMYSTIID 158

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+  VD+A +L  +M  + I PDV+TY ++I GFC A    EA  L  EM+ + + P
Sbjct: 159 GLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N+ T++ ++D LCK GK++E+  LL +M + GV+P+  +Y+ LMDG+CL G V +AK++F
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
           + M   G   +V+SY+I+ING CK K ++ A++L  EML K + P  VTY++L  GL ++
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++     L  EM   G  A+   Y + +DGLCKN  + +A+ LF  ++    + +  +Y
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 398

Query: 309 SCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           + LIDGLCK GRLK    LF H L +G  I DV TY +MI  LC +G  D+A  +   ME
Sbjct: 399 TALIDGLCKGGRLKKGQALFQHLLVKGYCI-DVWTYTVMISGLCKEGMFDEALAMKSKME 457

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G  P+ V F  ++   +  +E  K  +LLH M
Sbjct: 458 DNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 202/371 (54%), Gaps = 6/371 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++     P+V+ YST+I+GLC+      A +L+ EM N  G F     PD + 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEM-NARGIF-----PDVIT 187

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+I G C  G + +A  LL +M  KNINP++ TYN++I   C      E+K L   M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV+P+VV +S++MD  C  G++++A Q+  +M+Q GV P+ + YN +++G C   RV+
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       +  +YS LI+G CK   I   L L  EM  +G    +VTYN+L 
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +++A  LF +M+  G+  + + Y   IDGLCK G + +   LF+ L +    
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D+ +Y+ +I GLCK G    A  +   +     I + VT+ I+I +L    + DKA  L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487

Query: 363 FLDMEAKGVAP 373
             +M AKG+ P
Sbjct: 488 LHEMIAKGLLP 498



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 197/388 (50%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P +I +  ++  L +  H    ++L ++M       G+V  PD V  + +I+  C  G +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQM----EAKGIV--PDLVTLSILINCFCHLGQM 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             +  +L ++      P+ +  N++++G C   +  ++     +++ QG Q + V++ ++
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LCK G+   A +LL  +     RP+  +Y+T++DG C    V+ A +L+  M + G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ LI G+C   ++  A  L +EM+ K I P + TYNTL   L +  +V+ +  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L   M + GV  D   Y   +DG C  G + +A ++F  +       D+ SY+ +I+GLC
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K  R+  A  L   +    +I D VTY+ +I  LC  G++    DL  +M  +G   + V
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N+L+ G  +N    K + L  +M ER
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKER 389



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 160/313 (51%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++ +  ++              L  +M  +G+ P++VT S++++  C  G+M  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  ++++G +PN  + NTLM G CL G V ++      + + G + +  SY IL+NG CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E   A+ L   +  +  +P VV Y+T+  GL +   V+ A+ L+ EM   G+  D   
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C  G ++EA  L   + +     +I +Y+ LID LCK G++K +  L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  DVV Y+I++   C  G++ KA  +FL M   GV PD  ++N ++ G  +     
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 393 KVVELLHRMDERN 405
           + + LL  M  +N
Sbjct: 308 EAMNLLREMLHKN 320



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 146/280 (52%), Gaps = 6/280 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L  ++      PN+ TY+TLI+ LC+ G    + NL   M       GV  KPD 
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK----GV--KPDV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ ++DG C  G V KAK++ L M    +NPDV +YN +I G C     +EA  L  E
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+ VT+S ++D LCK G++     L + M   G   N   YN+L+DG C    
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  LF+ M+  G + N ++Y+ LI+G CK   ++   +L+  +L KG    V TY  
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  GL +    + A  +  +M+ +G   +   +   I  L
Sbjct: 436 MISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  293 bits (751), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 156/403 (38%), Positives = 243/403 (60%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G + N ++Y+TLING+C+ G T  A+ L  ++       G + KP+  
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVE 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCK   V +A  L  +M  K I+ DVVTY+++I GFC      EA  L  EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV T+++++D LCK GK++EA  +L +M++  V+P+   Y+TLMDG+ L   V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +VTY++L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++   + L DEM+  G  AD   Y + IDGLCKNG++  A+ LF  ++  + 
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +++ L+DGLCK GRLK A E+F  L       +V TYN+MI+  C  G +++A  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   ME  G  P+   F T+++   + +E  K  +LL +M  R
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P++IT + LIN  C  G      ++  +++           PD V 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             T+I GLC +G V KA     ++  +    + V+Y ++I G C   D+  A +L  ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 191

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  +S I+D LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KP V+TY+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EAL LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             I +YS LIDGLCKSGR+   W+L   +      ADV+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M+ + + P+   F  L+ G  +        E+   +
Sbjct: 432 FNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 189/370 (51%), Gaps = 8/370 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  L  K+     +PNV  YST+I+ LC+      A  LF EM + G          D V
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG-------ISADVV 235

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I G C EG + +A  LL +M  K INP+V TYN ++   C      EAK +   M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   V+P+V+T+S +MD      ++++A  +   M  +GV P+   Y  L++GFC    V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M        + +YS LI+G CK+  I     L  EM  +G    V+TY++L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   ++RA  LF++M+   +  + + +   +DGLCK G + +A E+F+ L     
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L++ +Y+ +I+G CK G L+ A  +   +     I +  T+  +I AL    + DKA  
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEK 535

Query: 362 LFLDMEAKGV 371
           L   M A+G+
Sbjct: 536 LLRQMIARGL 545



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 158/313 (50%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++ +N ++  F      + A  L   +  +G+QP+++T +++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +++ G  P+    NTL+ G CL G+V +A      + + G + N  SY+ LING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +  GA+ L  ++  +  KP V  Y+T+   L +   V  A+ LF EM   G++AD   
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C  G + EA+ L   + +     ++ +Y+ L+D LCK G++K A  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  DV+TY+ ++       ++ KA  +F  M   GV PD   +  L+ G  +N    
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 393 KVVELLHRMDERN 405
           + + L   M ++N
Sbjct: 357 EALNLFKEMHQKN 369


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 157/404 (38%), Positives = 236/404 (58%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   +  +Y TLINGLC+ G T  AL +  ++       G + K + V
Sbjct: 156 EALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID------GKLVKINVV 209

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID LCK   V  A EL  QM  K I+PDVVT++++I GFC      EA  LF EM
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+  TF++++D LCK G ++ A  +L +M++ GV PN   Y++LMDG+CL  +V
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +  ++  MG   N  SY  +ING+CK K ++ ALSL+++M  KGI P  VTYN+L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A++L DEM  +G  A+ + Y   ID LCKN ++ +A+ L + ++    
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +++ LI GLCK GRLK A ++F  L       +  TYNIM++ LC +G  D+A  
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   M+  G+ PD V + TL+      +E  K  +LL  M  R+
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARD 553



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 185/354 (52%), Gaps = 6/354 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+ Y+T+I+ LC+    I A  L+ +MI           PD V ++ +I G C  G ++
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK------ISPDVVTFSALIYGFCIVGQLE 260

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L  +M  KNINPD  T+N ++   C   +   AK + + MM +GV PNVVT+S +M
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  C   ++ +A  +L  + Q+G  PNA  Y T+++GFC    V+ A  LF  M+  G  
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +  +Y+ LI+G CK+  I  A  L  EM   G    + TYN L   L + H V++A  L
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             +++  G+  D + +   I GLCK G +  A ++F+ L      ++  +Y+ +++GLCK
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G    A  L   +    +I D VTY  +I AL    + +KA  L  +M A+ V
Sbjct: 501 EGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 35/362 (9%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   +  +I+  C    ++ A  ++ ++      PD +T+N++I+G C      EA   
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160

Query: 118 FIEMMDQG-----------------------------------VQPNVVTFSVIMDELCK 142
              ++  G                                   V+ NVV ++ I+D LCK
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           +  + +A +L   MI   + P+   ++ L+ GFC+ G++  A  LF  M       + ++
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++IL++  CK   ++GA ++   M+ +G+ P VVTY++L  G   ++QV +A  + + + 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           + G A +  +Y T I+G CK   + EAL LF  ++      D  +Y+ LIDGLCKSGR+ 
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            AWEL   +      A++ TYN +I ALC +  +D+A  L   ++ +G+ PD   FN L+
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 383 LG 384
            G
Sbjct: 461 YG 462



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 1/175 (0%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N     A+SL   +   GI P + T+N L      + ++  AF +  ++ + G   DT  
Sbjct: 81  NNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTIT 140

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + T I GLC NG + EAL     +  L   LD  SY  LI+GLCK G  + A ++   + 
Sbjct: 141 FNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID 200

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CI 386
             ++  +VV YN +I +LC    +  A++L+  M AK ++PD V F+ L+ G CI
Sbjct: 201 GKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCI 255


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/400 (37%), Positives = 236/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M     E       D V
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ADVV 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+ TIID LCK   VD A  L  +M+ K I P+VVTY+S+I   C     ++A +L  +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+VTF+ ++D   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++AK++F  M S  C  ++ +Y+ LI G+CK+K +E    L+ EM  +G+    VTY TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  Y+ +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A+ 
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+  G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 218/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G  P+ IT++TLI+GL        A+ L + M+         C+P+ V
Sbjct: 98  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G +D A  LL +M+   I  DVV +N++I   C     ++A  LF EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +ASQLL  MI+  + PN   +N L+D F   G+ 
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M       ++F+Y+ LING+C +  ++ A  ++  M+SK   P + TYNTL
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ V +NT++ G        +   LL +M E
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493



 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 204/399 (51%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  K++  G   N+ TY+ LIN  CR     +AL L  +M+    E      P  V  +
Sbjct: 31  SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLS 84

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    +  A  L+ QM +    PD +T+ ++I G    N ++EA  L   M+ +
Sbjct: 85  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN+VT+ V+++ LCK G ++ A  LL  M    +  +  ++NT++D  C    V+ A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME+ G + NV +YS LI+  C       A  L S+M+ K I P +VT+N L   
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +   A KL D+M +  +  D + Y + I+G C +  + +A ++F  +    C  D
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI G CKS R++   ELF  +    L+ D VTY  +I  L  DG  D A  +F 
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            M + GV PD + ++ L+ G   N +  K +E+   M +
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 174/347 (50%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  ++  + K    D    L  +M+   I+ ++ TYN +I  FC  +  + A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++VT S +++  C   ++ +A  L++ M+++G RP+   + TL+ G  L
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             + + A  L   M   GC+ N+ +Y +++NG CK  +I+ A +L ++M +  I+  VV 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G   +A +L   + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K   ++ +++ LID   K G+   A +L   + +  +  D+ TYN +I+  C   ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           KA  +F  M +K   PD   +NTL+ G  ++       EL   M  R
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 139/241 (57%), Gaps = 6/241 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +     +P++ TY++LING C       A  +FE M++ +      C PD 
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDL 325

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+I G CK   V+   EL  +M  + +  D VTY ++I+G  +  D + A+++F +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LC NGK+E+A ++ + M +  ++ + ++Y T+++G C  G+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P   TYNT
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505

Query: 241 L 241
           L
Sbjct: 506 L 506



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 141/278 (50%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++  F+ ++  + K  K +    L E M ++G+  N + YN L++ FC   +++ A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M  +G + ++ + S L+NGYC  K I  A++L  +M+  G +P  +T+ TL  GLF 
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
            ++   A  L D M + G   +   Y   ++GLCK G I  A  L   +   K E D+  
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           ++ +ID LCK   +  A  LF  +    +  +VVTY+ +I  LC+ G+   A  L  DM 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            K + P+ V FN L+   ++  +  +  +L   M +R+
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 132/249 (53%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++    P+ F +N L+       + +    L   M+ +G  HN+++Y+ILIN +C+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I  AL+L  +M+  G +P++VT ++L  G     ++  A  L D+M   G   DT  + T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I GL  +    EA+ L   +    C+ ++ +Y  +++GLCK G + +A+ L + +    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           + ADVV +N +I +LC    +D A +LF +ME KG+ P+ V +++L+         S   
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 396 ELLHRMDER 404
           +LL  M E+
Sbjct: 241 QLLSDMIEK 249



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  L   G +PNV+TY+T+I+GLC       A  L ++M     E G +  PD+  Y T
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM----KEDGPL--PDSGTYNT 505

Query: 66  IIDGLCKEGFVDKAKELLLQMK 87
           +I    ++G    + EL+ +M+
Sbjct: 506 LIRAHLRDGDKAASAELIREMR 527


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/400 (37%), Positives = 236/400 (59%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M     E       D V
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ADVV 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+ TIID LCK   VD A  L  +M+ K I P+VVTY+S+I   C     ++A +L  +M
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+VTF+ ++D   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++AK++F  M S  C  ++ +Y+ LI G+CK+K +E    L+ EM  +G+    VTY TL
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  Y+ +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A+ 
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+  G  PD   +NTL+   +R+ + +   EL+  M
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/402 (34%), Positives = 218/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G  P+ IT++TLI+GL        A+ L + M+         C+P+ V
Sbjct: 97  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 150

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G +D A  LL +M+   I  DVV +N++I   C     ++A  LF EM
Sbjct: 151 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 210

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVVT+S ++  LC  G+  +ASQLL  MI+  + PN   +N L+D F   G+ 
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M       ++F+Y+ LING+C +  ++ A  ++  M+SK   P + TYNTL
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +YS L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ V +NT++ G        +   LL +M E
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPD 59
           +A  LF  +      P++  ++ L++ + +      +++L L  +M+    E      P 
Sbjct: 25  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE------PS 78

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V  +++++G C    +  A  L+ QM +    PD +T+ ++I G    N ++EA  L  
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+ +G QPN+VT+ V+++ LCK G ++ A  LL  M    +  +  ++NT++D  C   
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  LF  ME+ G + NV +YS LI+  C       A  L S+M+ K I P +VT+N
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +  +   A KL D+M +  +  D + Y + I+G C +  + +A ++F  +   
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  D+ +Y+ LI G CKS R++   ELF  +    L+ D VTY  +I  L  DG  D A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +F  M + GV PD + ++ L+ G   N +  K +E+   M +
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 139/241 (57%), Gaps = 6/241 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +     +P++ TY++LING C       A  +FE M++ +      C PD 
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDL 324

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+I G CK   V+   EL  +M  + +  D VTY ++I+G  +  D + A+++F +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P+++T+S+++D LC NGK+E+A ++ + M +  ++ + ++Y T+++G C  G+
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P   TYNT
Sbjct: 445 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 504

Query: 241 L 241
           L
Sbjct: 505 L 505



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 149/288 (51%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +MM  G +P++VT S +++  C   ++ +A  L++ M+++G RP+   + TL+ G  
Sbjct: 66  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           L  + + A  L   M   GC+ N+ +Y +++NG CK  +I+ A +L ++M +  I+  VV
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            +NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G   +A +L   +
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
              K   ++ +++ LID   K G+   A +L   + +  +  D+ TYN +I+  C   ++
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           DKA  +F  M +K   PD   +NTL+ G  ++       EL   M  R
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 353



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 2/266 (0%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV--SMESMGCKHN 199
           K+ K+++A  L   M++    P+ F +N L+       + +    L +   M  +G + +
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           + + S L+NGYC  K I  A++L  +M+  G +P  +T+ TL  GLF  ++   A  L D
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M + G   +   Y   ++GLCK G I  A  L   +   K E D+  ++ +ID LCK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            +  A  LF  +    +  +VVTY+ +I  LC+ G+   A  L  DM  K + P+ V FN
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
            L+   ++  +  +  +L   M +R+
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRS 284



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  L   G +PNV+TY+T+I+GLC       A  L ++M     E G +  PD+  Y T
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM----KEDGPL--PDSGTYNT 504

Query: 66  IIDGLCKEGFVDKAKELLLQMK 87
           +I    ++G    + EL+ +M+
Sbjct: 505 LIRAHLRDGDKAASAELIREMR 526


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/397 (37%), Positives = 237/397 (59%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E GV+      IY 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL------IYN 55

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           TIIDGLCK   +D A  L  +M+ K I P+VVTY+S+I   C     ++A RL  +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+V TFS ++D   K GK+ EA +L + M++  + P+   Y++L++GFC+  R++ A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+    VTYN L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K E  
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +Y+ +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  LF 
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M+  G  P+   +NTL+   +R+ +     EL+  M
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 199/348 (57%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+PD V Y  +++GLCK G  D A  LL +M+   + P V+ YN++I G C     ++A 
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM  +G++PNVVT+S ++  LC  G+  +AS+LL  MI+  + P+ F ++ L+D F
Sbjct: 72  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
              G++  A++L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   P V
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTYNTL  G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ 
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +I +Y+ L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++   DLF ++  KGV PD VA+NT++ G  R     +   L   M E
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF +++  G  PNV+TYS+LI+ LC  G    A  L  +MI           PD  
Sbjct: 69  DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK------INPDVF 122

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +ID   KEG + +A++L  +M  ++I+P +VTY+S+I GFC  +  +EAK++F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P+VVT++ ++   CK  ++EE  ++   M Q G+  N   YN L+ G    G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+E+F  M S G   N+ +Y+ L++G CKN ++E A+ ++  +    ++PT+ TYN +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +VE  + LF  +   GV  D  AY T I G C+ G   EA  LF+ ++    
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +   Y+ LI    + G  + + EL   +       D  T  ++ + L  DG++DK+  
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 419

Query: 362 LFLDM 366
            FLDM
Sbjct: 420 -FLDM 423



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P+++TYS+LING C       A  +FE M++ +      C PD 
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 191

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V++  E+  +M  + +  + VTYN +I+G   A D + A+ +F E
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P  + YN +++G C  G+
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P    YNT
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 371

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 372 LIRARLRDGDREASAELIKEMRSCGFAGDA 401



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 114/218 (52%)

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L   M + GC+ ++ +Y +++NG CK  + + A +L ++M    ++P V+ YNT+  GL 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +   ++ A  LF EM+  G+  +   Y + I  LC  G   +A  L   +   K   D+ 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           ++S LID   K G+L  A +L+  + +  +   +VTY+ +I+  C   ++D+A  +F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +K   PD V +NTL+ G  +     + +E+   M +R
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 3/182 (1%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           ++L   M++KG +P +VTY  +  GL +    + AF L ++M++  +      Y T IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LCK  ++ +AL LF+ +       ++ +YS LI  LC  GR   A  L   +    +  D
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CI--RNNETSKVVE 396
           V T++ +I A   +GK+ +A  L+ +M  + + P  V +++L+ G C+  R +E  ++ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 397 LL 398
            +
Sbjct: 181 FM 182



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 68/149 (45%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D M   G   D   Y   ++GLCK G    A  L   +   K E  +  Y+ +IDGLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K   +  A  LF  +    +  +VVTY+ +I  LC  G+   A  L  DM  + + PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            F+ L+   ++  +  +  +L   M +R+
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRS 151


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 153/415 (36%), Positives = 238/415 (57%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E     KP+ 
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSRIKPNV 248

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGL K+G    A+ L  +M++K I+P++ TYN +I GFC +   +EA+RL  E
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + P+VVTFSV+++ L K GK  EA +L   M+  G+ PN   YN+++DGF    R
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  +V ++SILI+GYC  K ++  + L  EM  +G+    +TY T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   L+ D +TYN +I  
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +KG +PD V F TL+ G  +       +E+   M  R
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 179/377 (47%), Gaps = 40/377 (10%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T +I   C    +  A     ++     +P +VT+++++ G C  +  +EA   F    
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF---- 169

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT---- 178
            Q  +PNV+ F+ +M+ LC+ G++ EA  LL+ M++ G++PN   Y T++DG C      
Sbjct: 170 HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 179 --------------------------------GRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           GR   A+ LF  M+  G   N+F+Y+ +
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+C +     A  L  EM  + + P VVT++ L   L +  +   A +L++EM   G+
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +T  Y + IDG  K   +  A  +F  +    C  D+ ++S LIDG C + R+    +
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L H + R  L+A+ +TY  +IH  C  G ++ A DL  +M + GV P+ V  NTL+ G  
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469

Query: 387 RNNETSKVVELLHRMDE 403
            N +    +E+   M +
Sbjct: 470 NNGKLKDALEMFKVMQK 486



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 145/266 (54%), Gaps = 17/266 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   L  ++   G   N ITY+TLI+G C+ G+   AL+L +EMI+       VC P+ V
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG-----VC-PNVV 459

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-----------NINPDVVTYNSVIRGFCYAND 110
              T++DGLC  G +  A E+   M+             ++ PDV TYN +I G      
Sbjct: 460 TCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGK 519

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            +EA+ L+ EM  +G+ P+ +T++ ++D LCK  +++EA+Q+ + M   G  P+   + T
Sbjct: 520 FSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTT 579

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++G+C  GRV    E+F  M   G   N  +Y  LI+G+C+   I GAL ++ EM+S G
Sbjct: 580 LINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSG 639

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFK 256
           + P  +T   +  GL+   +++RA +
Sbjct: 640 VYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 11/305 (3%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF      ++A  LF  M+     P V+ F  ++  + +   ME    ++ L  ++ +R 
Sbjct: 50  GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVR---MERPDVVISLHRKMEMRR 106

Query: 164 ---NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
              N + +  L+  FC   ++  A   F  +  +G   ++ ++S L++G C    +  AL
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + ++     KP V+ + TL  GL    +V  A  L D M   G+  +   Y T +DG+
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 281 CKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           CK G  V AL L R +  + + + ++  YS +IDGL K GR   A  LF  +    +  +
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           + TYN MI+  C+ G+  +A  L  +M  + ++PD V F+ L+   ++  +  +  EL +
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342

Query: 400 RMDER 404
            M  R
Sbjct: 343 EMLPR 347



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 93/198 (46%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K ++ A+ L+  M+     P V+ +  L   +  + + +    L  +M+   
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  + +++   I   C    +  AL  F  +  L     + ++S L+ GLC   R+  A 
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
             FH + +     +V+ +  +++ LC +G++ +A  L   M   G+ P+ + + T++ G 
Sbjct: 167 HFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 223 CKMGDTVSALNLLRKMEE 240


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/398 (39%), Positives = 237/398 (59%), Gaps = 17/398 (4%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P + +++ L+ GL +  H     +L+ +M + G         PD      + + LC    
Sbjct: 88  PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAG-------LSPDLFTLNILANCLCNLNR 140

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGF---CYANDSNEAKRLFIEMMDQGVQPNVVT 132
           V +    +  +  +   PD+VTYN++I+G    C     +EAK +F EM  QG+ PNV++
Sbjct: 141 VSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVIS 200

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV---NRAKELFV 189
           +S ++   C  GK+EE+ +L   M+  GV+PN   +N L+D  C  G++   + A++LF+
Sbjct: 201 YSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFL 260

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           SM S GC+HN  SY+ILINGYCK  ++E A++LY+EM   G +P V TY+TL  GL +  
Sbjct: 261 SMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTG 320

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V  A KLF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+    +LD  SYS
Sbjct: 321 KVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYS 380

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA- 368
            LIDGLCK+G+++IAWE F  L +  L  +VVT NIMIH  C   ++DKA+ LF  ME  
Sbjct: 381 RLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKM 440

Query: 369 --KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              G  PD + +NTL+ G   +N+  +VV LLH+M +R
Sbjct: 441 EENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 184/339 (54%), Gaps = 15/339 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLIN---GLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           E  A  T +   G  P+++TY+TLI    GLC+ GH   A  +FEEM       G++  P
Sbjct: 143 EGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM----KAQGMI--P 196

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA---NDSNEAK 115
           + + Y++++ G C  G ++++K L  +M D+ + P++V +N +I   C      D + A+
Sbjct: 197 NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSAR 256

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +LF+ M  +G + N ++++++++  CK  K+EEA  L   M Q+G RPN   Y+TL+ G 
Sbjct: 257 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 316

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
             TG+V  A +LF  M++ G   +   Y I ++G CKN  +  A+ L++E+ S   K   
Sbjct: 317 LQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDF 376

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            +Y+ L  GL +  +VE A++ F ++ + G+  +       I G C+   + +A  LF  
Sbjct: 377 ESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEK 436

Query: 296 LRILK---CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +  ++   C  DI +Y+ L+ G C+S +L+    L H +
Sbjct: 437 MEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 8/355 (2%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN-DSNEAKR 116
           P   + + I   + +    +    +LL   D+ I+      +S +R     N D  +A  
Sbjct: 18  PLCTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQH-RLSSFLRNCKTGNIDVIQAFH 76

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            F  MM     P + +F+ ++  L K     +   L   M   G+ P+ F  N L +  C
Sbjct: 77  FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLC 136

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGY---CKNKEIEGALSLYSEMLSKGIKP 233
              RV+        +   G   ++ +Y+ LI G    CK    + A  ++ EM ++G+ P
Sbjct: 137 NLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIP 196

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI---VEAL 290
            V++Y++L  G     ++E + +LF+EM   GV  +   +   ID LCK G I     A 
Sbjct: 197 NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSAR 256

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           +LF ++    CE +  SY+ LI+G CK  +++ A  L++ +P+     +V TY+ ++  L
Sbjct: 257 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 316

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              GK+  A+ LF  M+A G++ D   +   + G  +N    + +EL + +   N
Sbjct: 317 LQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYN 371


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/385 (39%), Positives = 228/385 (59%), Gaps = 5/385 (1%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ++Y TLINGLC++G T  AL L  ++     E  ++ +PD ++YT IID  CK+  V  A
Sbjct: 159 VSYGTLINGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            +L  +M  K I P+VVT+NS+I GFC      EA  L  EM    V PNV TF++++D 
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK G++++A+ +L +MI+ GV PN   Y +LMDG+ L   VN+AK +F ++   G   N
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V SYS++ING CKNK ++ A+ L+ EM  K + P  VTY++L  GL +  ++   + L D
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           E+   G  A+   Y + ++GLCKN  + +A+ L   ++    + D+ +Y+ L+DGLCK+G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           RLK A  ++  L       ++  Y +MI+ LC +G  D+A  L   ME  G  PD V + 
Sbjct: 454 RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+    +NN+  K V+LL  M  R
Sbjct: 514 TLISALFKNNKNGKAVKLLREMIAR 538



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 186/331 (56%), Gaps = 6/331 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L++++      PNV+T+++LI G C  G    A+ L  EM   N        P+ 
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN------VNPNV 264

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  +IDGLCKEG V KA  +L  M  + + P+VVTY S++ G+    + N+AK +F  
Sbjct: 265 YTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNT 324

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +GV PNV ++SV+++ LCKN  ++EA +L + M    + PN   Y++L+DG C +GR
Sbjct: 325 ISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGR 384

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++   +L   + + G   N+ +Y+ L+NG CKN +++ A++L ++M  +GI+P + TY T
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTT 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +++ A +++ ++   G   +   Y   I+GLCK G+  EAL L   +    
Sbjct: 445 LVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 504

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           C  D  +Y  LI  L K+ +   A +L   +
Sbjct: 505 CMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 183/348 (52%), Gaps = 1/348 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L K      A     QM+ K I P++ T+N +I  F +    N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ VT + ++  LC NGK++EA    + +I+     +   Y TL++G C 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 178 TGRVNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           +G    A +L   +E  +  + +V  Y+ +I+ +CK+K +  A  LYSEM+ K I P VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+N+L  G   + Q++ A  L +EM  + V  + + +   IDGLCK G + +A  +   +
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E ++ +Y+ L+DG      +  A  +F+++    +  +V +Y++MI+ LC +  +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A  LF +M  K + P+ V +++L+ G  ++   S V +L+  ++ R
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNR 398



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  PNV +YS +INGLC+      A+ LF+EM   N        P+ V
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN------MTPNTV 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G +    +L+ ++ ++    +++TYNS++ G C  +  ++A  L  +M
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+QP++ T++ ++D LCKNG++++A ++ + ++  G   N  +Y  +++G C  G  
Sbjct: 431 KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFF 490

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + A  L   ME  GC  +  +Y  LI+   KN +   A+ L  EM+++
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 1/207 (0%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +F ++ +++   K    + A+S   +M  KGI+P + T+N L      + Q+  AF +  
Sbjct: 53  IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           ++ + G   DT    T + GLC NG + EAL     +   +  LD  SY  LI+GLCKSG
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 320 RLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             + A +L   +   +L+  DV+ Y  +I + C D  +  A+DL+ +M  K + P+ V F
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           N+L+ G     +  + V LL+ M   N
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNN 259


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 235/400 (58%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY T++NGLC+ G   +ALNL  +M           K + V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+ TIID LCK   V+ A +L  +M+ K I P+VVTYNS+I   C     ++A RL   M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTF+ ++D   K GK+ EA +L E MIQ  + P+   YN L++GFC+  R+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK++F  M S  C  N+ +Y+ LING+CK K +E  + L+ EM  +G+    VTY T+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    + A  +F +M  + V  D   Y   + GLC  G +  AL +F+ L+  + 
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           EL+I  Y+ +I+G+CK+G++  AW+LF SL    +  DVVTYN MI  LC+   + +A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADD 556

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 6/380 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   ++ TYS  IN  CR     +AL +  +M+    E      PD V  +
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE------PDIVTLS 157

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    +  A  L+ QM +    PD  T+ ++I G    N ++EA  L  +M+ +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP++VT+  +++ LCK G ++ A  LL  M    ++ N  ++NT++D  C    V  A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +LF  ME+ G + NV +Y+ LIN  C       A  L S ML K I P VVT+N L   
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F+  ++  A KL +EM +  +  DT  Y   I+G C +  + EA ++F+ +    C  +
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I++Y+ LI+G CK  R++   ELF  + +  L+ + VTY  +I      G  D A  +F 
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            M +  V  D + ++ L+ G
Sbjct: 458 QMVSNRVPTDIMTYSILLHG 477



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + K    +    L  QM+   I+ D+ T
Sbjct: 67  AVDLFGDMVKSRPF------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+  I  FC  +  + A  +  +MM  G +P++VT S +++  C + ++ +A  L++ M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+ F + TL+ G  L  + + A  L   M   GC+ ++ +Y  ++NG CK  +I+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL+L ++M +  IK  VV +NT+   L +   VE A  LF EM+  G+  +   Y + I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LC  G   +A  L   +   K   ++ +++ LID   K G+L  A +L   + +  + 
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D +TYN++I+  C   ++D+A  +F  M +K   P+   +NTL+ G  +       VEL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420

Query: 398 LHRMDER 404
              M +R
Sbjct: 421 FREMSQR 427



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 171/351 (48%), Gaps = 39/351 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LFT+++  G  PNV+TY++LIN LC  G    A  L   M+           P+ V 
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK------INPNVVT 330

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +ID   KEG + +A++L  +M  ++I+PD +TYN +I GFC  N  +EAK++F  M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PN+ T++ +++  CK  ++E+  +L   M Q G+  N   Y T++ GF   G  +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY-----SEM----------- 226
            A+ +F  M S     ++ +YSIL++G C   +++ AL ++     SEM           
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510

Query: 227 ----------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                            S  IKP VVTYNT+  GL     ++ A  LF +M+  G   ++
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
             Y T I    ++     + EL + +R      D  + S L+  +   GRL
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRL 620



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 153/294 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V F+ ++  + K  K E    L E M  +G+  + + Y+  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G + ++ + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP   T+ TL  GLF  ++   A  L D+M + G   D   Y T ++GLCK G I  AL 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   + + ++  ++ +ID LCK   +++A +LF  +    +  +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+   A  L  +M  K + P+ V FN L+    +  +  +  +L   M +R+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 164/314 (52%), Gaps = 1/314 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VD A +L   M      P +V +N ++      N       L  +M   G+  ++ T+S+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++  C+  ++  A  +L  M+++G  P+    ++L++G+C + R++ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K + F+++ LI+G   + +   A++L  +M+ +G +P +VTY T+  GL +   ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L ++M+   + A+   + T ID LCK  ++  A++LF  +       ++ +Y+ LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR   A  L  ++    +  +VVT+N +I A   +GK+ +A  L  +M  + + PD 
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 376 VAFNTLMLG-CIRN 388
           + +N L+ G C+ N
Sbjct: 364 ITYNLLINGFCMHN 377



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 9/269 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++     +P+ ITY+ LING C       A  +F+ M++ +      C P+ 
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD------CLPNI 398

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+I+G CK   V+   EL  +M  + +  + VTY ++I+GF  A D + A+ +F +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V  +++T+S+++  LC  GK++ A  + + + +  +  N F+YNT+++G C  G+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A +LF    S+  K +V +Y+ +I+G C  + ++ A  L+ +M   G  P   TYNT
Sbjct: 519 VGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L            + +L  EM+  G   D
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGD 604



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 25/315 (7%)

Query: 114 AKRLFIEMMDQGV--QPNVVTF---------------------SVIMDELCKNGKMEEAS 150
           AKRLF+    QG+   P V +F                      ++ + L    K+++A 
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            L   M++    P+   +N L+       +      L   M+++G  H++++YSI IN +
Sbjct: 69  DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++  AL++ ++M+  G +P +VT ++L  G     ++  A  L D+M   G   DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           + + T I GL  +    EA+ L   +    C+ D+ +Y  +++GLCK G + +A  L + 
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN-N 389
           +    + A+VV +N +I +LC    ++ A DLF +ME KG+ P+ V +N+L + C+ N  
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INCLCNYG 307

Query: 390 ETSKVVELLHRMDER 404
             S    LL  M E+
Sbjct: 308 RWSDASRLLSNMLEK 322



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  L+    E N+  Y+T+I G+C+ G    A +LF           +  KPD V 
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---------CSLSIKPDVVT 537

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I GLC +  + +A +L  +MK+    P+  TYN++IR      D   +  L  EM 
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEA 149
             G   +  T S++ + L  +G+++++
Sbjct: 598 SSGFVGDASTISLVTNML-HDGRLDKS 623


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 157/394 (39%), Positives = 230/394 (58%), Gaps = 8/394 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+ A G + + ++Y TL+NGLC+ G T  A+ L   MI          +P+ V+Y TIID
Sbjct: 105 KVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLR-MIEDRST-----RPNVVMYNTIID 158

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+  V++A +L  +M  + I PD +TY ++I GFC       A  L  EM+ + + P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP 218

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            V  ++++++ LCK G ++EA  LL +M + G++P    Y+TLMDG+CL G V  AK++F
Sbjct: 219 GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIF 278

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
            +M  MG   NV+SY+I+ING CK K ++ A++L  EML K + P  VTYN+L  GL + 
Sbjct: 279 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A  L +EM   G  AD   Y + +D LCKN  + +A  LF  ++    +  + +Y
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398

Query: 309 SCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           + LIDGLCK GRLK A ELF H L +G  I DV TY +MI  LC +G  D+A  +   ME
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCI-DVWTYTVMISGLCKEGMFDEALAIKSKME 457

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G  P+ V F  ++      +E  K  +LLH M
Sbjct: 458 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491



 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 211/399 (52%), Gaps = 10/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++     PNV+ Y+T+I+GLC+      A +L+ EM +  G F     PDA+ 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIF-----PDAIT 187

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+I G C  G +  A  LL +M  KNINP V  YN +I   C   +  EAK L   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P VVT+S +MD  C  G+++ A Q+   M+Q+GV PN + YN +++G C   RV+
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       +  +Y+ LI+G CK+  I  AL+L +EM  +G    VVTY +L 
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   +++A  LF +M+  G+    + Y   IDGLCK G +  A ELF+ L +  C 
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D+ +Y+ +I GLCK G    A  +   +     I + VT+ I+I +L    + DKA  L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M AKG+    +  +  +      NE  K  +LLH M
Sbjct: 488 LHEMIAKGL----LVLDFKVADVFVQNENDKAEKLLHEM 522



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 202/371 (54%), Gaps = 12/371 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L++++ A G  P+ ITY+TLI G C  G  + A +L +EMI  N        P   
Sbjct: 168 EAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN------INPGVY 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +I+ LCKEG V +AK LL  M  + I P VVTY++++ G+C   +   AK++F  M
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV PNV +++++++ LCK  +++EA  LL  M+   + P+   YN+L+DG C +GR+
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   +V +Y+ L++  CKN+ ++ A +L+ +M  +GI+PT+ TY  L
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A +LF  +   G   D W Y   I GLCK G   EAL +   +    C
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  ++  +I  L +      A +L H +  +G+L+ D    ++ +       + DKA 
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQ-----NENDKAE 516

Query: 361 DLFLDMEAKGV 371
            L  +M AKG+
Sbjct: 517 KLLHEMIAKGL 527



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 205/421 (48%), Gaps = 43/421 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P +I ++ ++  L +    + A++L ++M + G        + + V    +I+  C  G 
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKG-------IRANFVTLNILINCFCHLGQ 60

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  +  +L ++      PD +T N++++G C   +  ++     +++ QG Q + V++  
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LCK G+   A +LL ++     RPN  +YNT++DG C    VN A +L+  M++ G
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-------------------------- 229
              +  +Y+ LI G+C   ++ GA SL  EM+ K                          
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240

Query: 230 ---------GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                    GIKP VVTY+TL  G   + +V+ A ++F  M + GV  + ++Y   I+GL
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   + EA+ L R +       D  +Y+ LIDGLCKSGR+  A  L + +      ADV
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 360

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTY  ++ ALC +  +DKA  LF+ M+ +G+ P    +  L+ G  +        EL   
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 420

Query: 401 M 401
           +
Sbjct: 421 L 421



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 180/347 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+  L K      A  L  QM+ K I  + VT N +I  FC+      +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ +T + +M  LC  G+++++    + ++  G + +   Y TL++G C 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A +L   +E    + NV  Y+ +I+G CK+K +  A  LYSEM ++GI P  +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G   + Q+  AF L DEM    +    + Y   I+ LCK G + EA  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  + +YS L+DG C  G ++ A ++FH++ +  +  +V +YNIMI+ LC   ++D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A +L  +M  K + PD V +N+L+ G  ++   +  + L++ M  R
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 29/295 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----- 55
           M A +L  ++      P V  Y+ LIN LC+ G+   A NL   M     + GVV     
Sbjct: 202 MGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTL 261

Query: 56  ------------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                     P+   Y  +I+GLCK   VD+A  LL +M  KN+
Sbjct: 262 MDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 321

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD VTYNS+I G C +     A  L  EM  +G   +VVT++ ++D LCKN  +++A+ 
Sbjct: 322 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATA 381

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   M + G++P  + Y  L+DG C  GR+  A+ELF  +   GC  +V++Y+++I+G C
Sbjct: 382 LFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLC 441

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           K    + AL++ S+M   G  P  VT+  +   LFE  + ++A KL  EM   G+
Sbjct: 442 KEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P    +N ++       +   A  L   ME  G + N  + +ILIN +C   +
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  + S+  ++L  G +P  +T NTL  GL    +V+++    D++   G   D  +Y T
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GLCK G    A++L R +       ++  Y+ +IDGLCK   +  A++L+  +    
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 336 LIADVVT-----------------------------------YNIMIHALCADGKMDKAH 360
           +  D +T                                   YNI+I+ALC +G + +A 
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L   M  +G+ P  V ++TLM G     E     ++ H M
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 152/415 (36%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E     KP+ 
Sbjct: 195 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM-----EEMSHIKPNV 249

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGL K+G    A  L  +M++K I PD+ TYN +I GFC +   +EA+RL  E
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNVVT+S +++   K  K  EA +L + M+  G+ PN   YN+++DGFC   R
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  +VF+++ LI+GYC  K I+    L  EM   G+     TYNT
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ + +TY+ MI+ 
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +PD V FNTL+ G  +       +EL   M  R
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRR 604



 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 232/450 (51%), Gaps = 57/450 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F K+   G +P+V+T+STL++GLC       AL+LF +M          C+P+ V 
Sbjct: 131 ALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----------CRPNVVT 180

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+++GLC+EG V +A  LL +M +  + P+ +TY +++ G C   D+  A  L  +M 
Sbjct: 181 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKME 240

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++PNVV +S I+D L K+G+  +A  L   M + G+ P+ F YN ++DGFC +GR 
Sbjct: 241 EMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRW 300

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L   M       NV +YS LIN Y K ++   A  LY EML +GI P  +TYN++
Sbjct: 301 SEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSM 360

Query: 242 FIGLFEIHQVERAFKLF-----------------------------------DEMQRHGV 266
             G  + ++++ A  +F                                    EM   G+
Sbjct: 361 IDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            ADT  Y T I G C  G +  AL+L + +       DI + + L+DGLC +G+LK A E
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480

Query: 327 LFHSL-----------PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           +F ++           P   +  DV TYNI+I  L  +GK  +A +L+ +M  +G+ P+ 
Sbjct: 481 MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNT 540

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +++++ G  + +   +  ++   M  ++
Sbjct: 541 ITYSSMINGLCKQSRLDEATQMFDSMGSKS 570



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 207/438 (47%), Gaps = 46/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+ +      P+VI ++ L+  + R     + ++L+++M        + C  D  
Sbjct: 60  DAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ----IPC--DVY 113

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I   C    +  A     ++      PDVVT+++++ G C  +  +EA  LF +M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT--- 178
                +PNVVTF+ +M+ LC+ G++ EA  LL+ M++ G++PN   Y T++DG C     
Sbjct: 174 ----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229

Query: 179 ---------------------------------GRVNRAKELFVSMESMGCKHNVFSYSI 205
                                            GR + A  L+  M+  G   ++F+Y+ 
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G+C +     A  L  EML + I P VVTY+ L     +  +   A +L+DEM   G
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +T  Y + IDG CK   +  A  +F  +    C  D+ +++ LIDG C + R+    
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL H +    L+AD  TYN +IH  C  G ++ A DL   M + GV PD V  NTL+ G 
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469

Query: 386 IRNNETSKVVELLHRMDE 403
             N +    +E+   M +
Sbjct: 470 CDNGKLKDALEMFKAMQK 487



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 158/343 (46%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITY+++I+G C+      A ++F  M          C PD  
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG------CSPDVF 390

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GFC   D N A  L  +M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  GV P++VT + ++D LC NGK++                                  
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L + M   G+ PN   Y+++++G C   R++ A ++F SM S  
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +V +++ L++GYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 571 FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGAL 630

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R+ +  L     +  A+ +   L++
Sbjct: 631 DIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 5/302 (1%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+V+ F+ +M  + +  + +    L + M +  +  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +N L+  FC   ++  A   F  +  +G + +V ++S L++G C    +  AL L+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    +V  A  L D M   G+  +   Y T +DG+CK 
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 284 GYIVEALELFRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +   + ++  YS +IDGL K GR   A  L+  +    +  D+ T
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+  +A  L  +M  + + P+ V ++ L+   ++  +  +  EL   M 
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346

Query: 403 ER 404
            R
Sbjct: 347 PR 348



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 104/198 (52%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+M+     P+V+ +N L   +  + + +    L+ +M+R  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L  + D+ ++S L+ GLC   R+  A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LFH + R     +VVT+  +++ LC +G++ +A  L   M   G+ P+ + + T++ G 
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 224 CKIGDTVSALNLLRKMEE 241


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 227/400 (56%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A GC+PN  TY  ++N +C++G+T  AL+L  +M +         KP  V
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK------IKPHVV 266

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT IID LCK+G +D A     +M+ K I  +V TYNS+I  FC     ++  +L  +M
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVVTFS ++D L K GK+ EA  L   MI  G+ PN   YN+L+ G C   R+
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M S GC  ++++Y+ILING+CK K+++  + L+ +M  +G+    VTY+TL
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++  A K+F EM   GV      Y   +DGLC NG + EAL +   +   K 
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKM 506

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y+ +I G+C + ++  AW LF SLP   +  D+ +YNIM+  LC    + +A  
Sbjct: 507 ELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADA 566

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M+  G  PD   +NTL+   +R N+ +  V+L+  M
Sbjct: 567 LFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 208/387 (53%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++IT +T++NGLC       A++L   M+  NG     C+P+   Y  I++ +CK G  
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMM-ANG-----CQPNQFTYGPILNRMCKSGNT 246

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A +LL +M+ + I P VVTY  +I   C     ++A   F EM  +G++ NV T++ +
Sbjct: 247 ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C  G+ ++ +QLL  MI   + PN   ++ L+D     G++  AK+L+  M + G 
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + N  +Y+ LI G C +K ++ A  +   M+SKG  P + TYN L  G  +  QV+   +
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR 426

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF +M   G+ ADT  Y T I G C++  ++ A ++F+ +        I +Y+ L+DGLC
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +G L+ A  +   + +  +  D+  YNI+IH +C   K+D A  LF  + +KGV  D  
Sbjct: 487 DNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++N ++ G  + +  S+   L  +M E
Sbjct: 547 SYNIMLSGLCKRSSLSEADALFRKMKE 573



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 205/397 (51%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  +++  G   ++ T + +IN  CR      A +   ++      F +  +P+ V + 
Sbjct: 111 ALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKI------FKLGYEPNTVTFN 164

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+++GLC EG V +A EL+  M      PD++T N+++ G C  +  +EA  L   MM  
Sbjct: 165 TLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN 224

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN  T+  I++ +CK+G    A  LL  M    ++P+   Y  ++D  C  GR++ A
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F  ME+ G K NVF+Y+ LI  +C     +    L  +M+++ I P VVT++ L   
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  ++  A  L++EM   G+  +T  Y + I GLC +  + EA ++   +    C+ D
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +Y+ LI+G CK+ ++     LF  +    +IAD VTY+ +I   C   K+  A  +F 
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQ 464

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M ++GV P  + +  L+ G   N E  + + +L +M
Sbjct: 465 EMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 193/365 (52%), Gaps = 10/365 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F++++  G + NV TY++LI   C  G       L  +MI           P+ V
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK------ITPNVV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +ID L KEG + +AK+L  +M  + I P+ +TYNS+I G C     +EA ++   M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++ T++++++  CK  ++++  +L   M   G+  +   Y+TL+ GFC + ++
Sbjct: 397 VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK++F  M S G    + +Y+IL++G C N E+E AL +  +M    ++  +  YN +
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+   ++V+ A+ LF  +   GV  D  +Y   + GLCK   + EA  LFR ++    
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI    +   +  + +L   + R    +D  T  I++  L + G++DK+  
Sbjct: 577 EPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDKS-- 633

Query: 362 LFLDM 366
            FL+M
Sbjct: 634 -FLNM 637



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+ LF+ M+           P  + +  +   L +    D    L  QM+ K I  D+ T
Sbjct: 74  AVALFQSMLRSRP------LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N +I  FC       A     ++   G +PN VTF+ +++ LC  G++ EA +L++ M+
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+    NT+++G CL  RV+ A +L   M + GC+ N F+Y  ++N  CK+    
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L  +M  + IKP VVTY  +   L +  +++ A   F EM+  G+ A+ + Y + I
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
              C  G   +  +L R +   K   ++ ++S LID L K G+L  A +L++ +    + 
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + +TYN +I+ LC D ++D+A+ +   M +KG  PD   +N L+ G  +  +    + L
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 398 LHRMDER 404
             +M  R
Sbjct: 428 FRKMSLR 434



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 143/308 (46%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           +Y   +R        ++A  LF  M+     P V+ F+ +   L +  + +    L + M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+  + +  N +++ FC   ++  A      +  +G + N  +++ L+NG C    +
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A+ L   M+     P ++T NT+  GL    +V  A  L   M  +G   + + Y   
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ++ +CK+G    AL+L R +   K +  + +Y+ +ID LCK GRL  A   F  +    +
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
            A+V TYN +I + C+ G+ D    L  DM  + + P+ V F+ L+   ++  + ++  +
Sbjct: 297 KANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKD 356

Query: 397 LLHRMDER 404
           L + M  R
Sbjct: 357 LYNEMITR 364


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  287 bits (735), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 239/415 (57%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-----EEVSHIIPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA++L + M+  G+ PN   YN+++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+    VTYNT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+ +Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F+ M +K  +P+ V FNTL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 231/416 (55%), Gaps = 18/416 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F ++    C PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P  +
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM----EDGL--QPTQI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK+G    A  LL +M++  +I P+VV Y+++I   C     ++A+ LF E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P++ T++ ++   C +G+  +A QLL+ M++  + P+   YN L++ F   G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A EL+  M   G   N  +Y+ +I+G+CK   ++ A  ++  M +KG  P V T+ T
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM R G+ A+T  Y T I G C  G +  AL+L + +    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----------PRGVLIADVVTYNIMIHA 349
              DI + + L+DGLC +G+LK A E+F ++           P   +  DV+TYNI+I  
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 218/414 (52%), Gaps = 18/414 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F K+   G  P+V+T++TL++GLC       AL+ F +M      F   C+P+ V 
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM------FETTCRPNVVT 186

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+++GLC+EG + +A  LL +M +  + P  +TY +++ G C   D+  A  L  +M 
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246

Query: 123 D-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PNVV +S I+D LCK+G+  +A  L   M + G+ P+ F YN+++ GFC +GR 
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L   M       +V +Y+ LIN + K  +   A  LY EML +GI P  +TYN++
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A  +F  M   G + D + + T IDG C    I + +EL   +     
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI G C  G L  A +L   +    +  D+VT N ++  LC +GK+  A +
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 362 LF-------LDMEAK----GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F       +D++A     GV PD + +N L+ G I   +  +  EL   M  R
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 177/369 (47%), Gaps = 9/369 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + +    D    L  +M+ K I  D+ +
Sbjct: 63  AIDLFSDMLRSRP------LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N +I+ FC  +    A   F ++   G+ P+VVTF+ ++  LC   ++ EA      M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +   RPN   + TLM+G C  GR+  A  L   M   G +    +Y  +++G CK  +  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 218 GALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            AL+L  +M     I P VV Y+ +   L +  +   A  LF EMQ  G+  D + Y + 
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGV 335
           I G C +G   +A +L + +   K   D+ +Y+ LI+   K G+   A EL+   LPRG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I + +TYN MI   C   ++D A D+F  M  KG +PD   F TL+ G          +
Sbjct: 357 -IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415

Query: 396 ELLHRMDER 404
           ELLH M  R
Sbjct: 416 ELLHEMPRR 424



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 160/343 (46%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L+ ++   G  PN ITY+++I+G C+      A ++F  M          C PD  
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +TT+IDG C    +D   ELL +M  + +  + VTYN++I GFC   D N A  L  +M
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  GV P++VT + ++D LC NGK++                                  
Sbjct: 457 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + G      +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 679



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL  +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 99/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           + FH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  287 bits (734), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 241/405 (59%), Gaps = 7/405 (1%)

Query: 1   MEAAALF-TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           ++ A LF  K+ A G   + I+Y TLI+GLC+ G T  AL+L +  ++GN     + +P+
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR-VDGN-----LVQPN 224

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V+Y TIID +CK   V++A +L  +M  K I+PDVVTY+++I GFC      +A  LF 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ + ++P+V TF+++++  CK+GKM+E   + ++M++ G++PN   YN+LMDG+CL  
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            VN+AK +F +M   G   ++ SYSI+ING+CK K+ + A++L+ EM  K I P VVTY+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  GL +  ++  A +L D+M   GV  +   Y + +D LCK   + +A+ L    +  
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + DI +YS LI GLC+SG+L+ A ++F  L       DV  Y IMI   C +G  ++A
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L   ME  G  PD   +  ++L   + +E     +LL  M  R
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 185/357 (51%), Gaps = 6/357 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PNV+ Y+T+I+ +C+      A +LF EM++          PD V Y+ +I G C  G 
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG------ISPDVVTYSALISGFCILGK 275

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A +L  +M  +NI PDV T+N ++  FC      E K +F  MM QG++PN VT++ 
Sbjct: 276 LKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +MD  C   ++ +A  +   M Q GV P+   Y+ +++GFC   + + A  LF  M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +V +YS LI+G  K+  I  AL L  +M  +G+ P + TYN++   L + HQV++A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L  + +  G   D   Y   I GLC++G + +A ++F  L +    LD+ +Y+ +I G 
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           C  G    A  L   +     I D  TY I+I +L    + D A  L  +M A+G+ 
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLP 572



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF +L      P    ++ ++  L ++ H    L L ++M     EF  + KP+ V
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 121

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C+ G +  A  +  ++      PD +T+ ++ +G C      +A     ++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKV 181

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G   + +++  ++  LCK G+   A  LL+ +    V+PN  +YNT++D  C    V
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +LF  M S G   +V +YS LI+G+C   +++ A+ L+++M+ + IKP V T+N L
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++    +FD M + G+  +   Y + +DG C    + +A  +F T+     
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI+SYS +I+G CK  +   A  LF  + R  +I DVVTY+ +I  L   G++  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M  +GV P+   +N+++    + ++  K + LL +  ++
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 193/387 (49%), Gaps = 6/387 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N I+YS+             A++LF  ++  N        P A  +  I+  L K     
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRN------TTPPAFEFNKILGSLVKSKHYH 102

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
               L  +M+ + I P++V  N +I  FC       A  +F +++  G  P+ +TF+ + 
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLS 162

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC  G++++A    + ++ +G   +   Y TL+ G C  G    A +L   ++    +
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV  Y+ +I+  CK K +  A  L+SEM+SKGI P VVTY+ L  G   + +++ A  L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F++M    +  D + +   ++  CK+G + E   +F  +     + +  +Y+ L+DG C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
              +  A  +F+++ +G +  D+ +Y+IMI+  C   K D+A +LF +M  K + PD V 
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           +++L+ G  ++   S  ++L+ +M +R
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDR 429



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++      P+V+TYS+LI+GL ++G    AL L ++M     + GV   P+  
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM----HDRGV--PPNIC 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +I+D LCK   VDKA  LL + KDK   PD+ TY+ +I+G C +    +A+++F ++
Sbjct: 437 TYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   +V  +++++   C  G   EA  LL  M   G  P+A  Y  ++         
Sbjct: 497 LVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556

Query: 182 NRAKELFVSMESMGCKHNVF 201
           + A++L   M + G   N +
Sbjct: 557 DMAEKLLREMIARGLPLNFY 576



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 35/240 (14%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLS---------------------------- 228
           K N  SYS     +  N +++ A+SL++ +L                             
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 229 -------KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
                  +GIKP +V  N L     ++  +  AF +F ++ + G   DT  + T   GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
             G I +A      +  L    D  SY  LI GLCK G  + A +L   +   ++  +VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            YN +I ++C    +++A DLF +M +KG++PD V ++ L+ G     +    ++L ++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 78/171 (45%)

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K   ++Y++        + V+ A  LF+ + R       + +   +  L K+ +    L 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +     + ++ + + LI+  C+ G +  A+ +F  + +   + D +T+  +   LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             G++ +A      + A G   D +++ TL+ G  +  ET   ++LL R+D
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  286 bits (733), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 151/389 (38%), Positives = 233/389 (59%), Gaps = 6/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G + N ++Y TLING+C+ G T  A+ L +++       G + KP+ V
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID------GRLTKPNVV 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCK   V +A  L  +M  K I+ DVVTY+++I GFC      EA  L  EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV T+++++D LCK GK++EA  +L +M++  V+P+   Y+TLMDG+ L   V
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +VTY++L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++   + L DEM   G  A+   Y + IDGLCKNG++  A+ LF  ++    
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +++ L+DGLCK GRLK A E+F  L       +V TYN+MI   C  G +++A  
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +   ME  G  PD V F  +++   + +E
Sbjct: 501 MLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 209/399 (52%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P++IT + LIN  C  G      ++  +++           PD V 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             T+I GLC +G V KA     ++  +    + V+Y ++I G C   D+  A +L  ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID 191

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNVV +S I+D LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KP V+TY+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EAL LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             I +YS LIDGLCKSGR+   W+L   +      A+V+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M+ +G+ P+   F  L+ G  +        E+   +
Sbjct: 432 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 206/399 (51%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++  K+   G  P+ +T +TLI GLC  G    AL+  ++++    +       + V Y 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL------NQVSYG 168

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G+CK G    A +LL ++  +   P+VV Y+++I   C     +EA  LF EM  +
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  +VVT+S ++   C  GK++EA  LL  M+   + PN + YN L+D  C  G+V  A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M     K +V +YS L++GY    E++ A  +++ M   G+ P V TY  L  G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +   V+ A  LF EM +  +      Y + IDGLCK+G I    +L   +       +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPAN 408

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS LIDGLCK+G L  A  LF+ +    +  +  T+ I++  LC  G++  A ++F 
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+  KG   +   +N ++ G  +     + + +L +M++
Sbjct: 469 DLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 157/313 (50%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++ +N ++  F      + A  L   +  +G+QP+++T +++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +++ G  P+    NTL+ G CL G+V +A      + + G + N  SY  LING CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A+ L  ++  +  KP VV Y+T+   L +   V  A+ LF EM   G++AD   
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C  G + EA+ L   + +     ++ +Y+ L+D LCK G++K A  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  DV+TY+ ++       ++ KA  +F  M   GV PD   +  L+ G  +N    
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 393 KVVELLHRMDERN 405
           + + L   M ++N
Sbjct: 357 EALNLFKEMHQKN 369



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 11/240 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  P+V TY+ LING C+      ALNLF+EM   N        P  V
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIV 375

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G +    +L+ +M D+    +V+TY+S+I G C     + A  LF +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG++PN  TF++++D LCK G++++A ++ + ++  G   N + YN ++DG C  G +
Sbjct: 436 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLL 495

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-----SKGIKPTVV 236
             A  +   ME  GC  +  ++ I+I    K  E  G +    ++       KG  P++ 
Sbjct: 496 EEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSIT 555



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 133/250 (53%), Gaps = 2/250 (0%)

Query: 124  QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +G+QP++ T +++++  C  G++     +L  +++ G  P+   + TL++G CL G+VN+
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 184  AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
            A      + + G + N  SY  LING CK  +   A+ L  ++  +  KP VV YNT+  
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
             L +   V +A+ LF EM   G++AD   Y T I G C  G + EA+ L   + +     
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 304  DIRSYSCLIDGLCKSGR--LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            ++R+Y+ L+D LCK G+  L  +  +   +      A+ VT+ I+I AL    + DK   
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 362  LFLDMEAKGV 371
            L  +M A+G+
Sbjct: 1195 LLHEMIARGL 1204



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 8/229 (3%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            ++  K+   G  P+ IT++TLINGLC  G    AL+  ++++    +       + V Y 
Sbjct: 982  SILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQL------NQVSYG 1035

Query: 65   TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            T+I+G+CK G    A +LL ++  +   PDVV YN++I   C     ++A  LF EM  +
Sbjct: 1036 TLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVK 1095

Query: 125  GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR--VN 182
            G+  +VVT++ ++   C  GK++EA  LL  M+   + PN   YN L+D  C  G+  ++
Sbjct: 1096 GISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLD 1155

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
             +  +   ME  GCK N  ++ I+I+   +  E +    L  EM+++G+
Sbjct: 1156 ESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%)

Query: 79   AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
            A  L  +++ K I PD+ T N +I  FC+         +  +++ +G  P+ +TF+ +++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 139  ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
             LC  G++ +A    + ++  G + N   Y TL++G C  G    A +L   ++    K 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 199  NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            +V  Y+ +I+  CK++ +  A  L+ EM  KGI   VVTYNTL  G   + +++ A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 259  DEMQRHGVAADTWAYRTFIDGLCKNG--YIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            ++M    +  +   Y   +D LCK G   + E+L +   +    C+ +  ++  +I  L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 317  KSGRLKIAWELFHSL-PRGVL 336
            +        +L H +  RG+L
Sbjct: 1185 EKDENDKVEKLLHEMIARGLL 1205



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 104/199 (52%)

Query: 184  AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
            A  L   +E  G + ++F+ +ILIN +C   +I    S+ +++L +G  P  +T+ TL  
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            GL    QV +A    D++   G   +  +Y T I+G+CK G    A++L R +     + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 304  DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            D+  Y+ +ID LCK   +  A+ LF  +    + ADVVTYN +I+  C  GK+ +A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 364  LDMEAKGVAPDCVAFNTLM 382
              M  K + P+   +N L+
Sbjct: 1125 NKMVLKTINPNVRTYNILV 1143



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 2/226 (0%)

Query: 57   KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            +PD      +I+  C  G +     +L ++  +  +PD +T+ ++I G C     N+A  
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 117  LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
               +++ QG Q N V++  +++ +CK G    A +LL  +     +P+  +YNT++D  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 177  LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
                V++A  LF  M   G   +V +Y+ LI G+C   +++ A+ L ++M+ K I P V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 237  TYNTLFIGLFEIHQ--VERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            TYN L   L +  +  ++ +  +  +M+ +G  A+   +   I  L
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 96/188 (51%)

Query: 214  KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            K    A+SL   +  KGI+P + T N L      + Q+   F +  ++ + G   DT  +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 274  RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             T I+GLC  G + +AL     L     +L+  SY  LI+G+CK G  + A +L   +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 334  GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             +   DVV YN +I ALC    + KA+ LF +M  KG++ D V +NTL+ G     +  +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 394  VVELLHRM 401
             + LL++M
Sbjct: 1120 AIGLLNKM 1127



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  L  K+     +P+V+ Y+T+I+ LC+      A  LF EM N  G        D V 
Sbjct: 1050 AIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEM-NVKG-----ISADVVT 1103

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS--NEAKRLFIE 120
            Y T+I G C  G + +A  LL +M  K INP+V TYN ++   C       +E+  +  +
Sbjct: 1104 YNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSK 1163

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
            M D G + N VTF +I+  L +  + ++  +LL  MI  G+
Sbjct: 1164 MEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 8/127 (6%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF ++   G   +V+TY+TLI G C  G    A+ L  +M+           P+  
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK------TINPNVR 1137

Query: 62   IYTTIIDGLCKEG--FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
             Y  ++D LCKEG   +D++  +L +M+D     + VT+  +I      +++++ ++L  
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 120  EMMDQGV 126
            EM+ +G+
Sbjct: 1198 EMIARGL 1204



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 59/116 (50%)

Query: 289  ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
            A+ L   L +   + D+ + + LI+  C  G++   + +   + +     D +T+  +I+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 349  ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             LC  G+++KA      + A+G   + V++ TL+ G  +  +T   ++LL ++D R
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 232/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G +PN +TY  ++  +C++G T +A+ L  +M           K DAV
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+G +D A  L  +M+ K    D++ Y ++IRGFCYA   ++  +L  +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV FS ++D   K GK+ EA +L + MIQ G+ P+   Y +L+DGFC   ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  +   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+    VTYNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +ALE+F  +   K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y+ +I G+C + ++  AW+LF SLP   +  DV TYNIMI  LC  G + +A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G +P+   +N L+   +   + +K  +L+  +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +P +IT + L+NGLC  G    A+ L + M+    E G   +P+ V
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV----ETGF--QPNEV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  +CK G    A ELL +M+++ I  D V Y+ +I G C     + A  LF EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +++ ++ ++   C  G+ ++ ++LL  MI+  + P+   ++ L+D F   G++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL   M   G   +  +Y+ LI+G+CK  +++ A  +   M+SKG  P + T+N L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + + ++   +LF +M   GV ADT  Y T I G C+ G +  A ELF+ +   + 
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY  L+DGLC +G  + A E+F  + +  +  D+  YNI+IH +C   K+D A D
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD   +N ++ G  +    S+   L  +M+E
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 208/390 (53%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N+ T S +IN  CR     +A +   ++I    E      PD V ++T+I+GLC E
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLINGLCLE 155

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A EL+ +M +    P ++T N+++ G C     ++A  L   M++ G QPN VT+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             ++  +CK+G+   A +LL  M +  ++ +A  Y+ ++DG C  G ++ A  LF  ME 
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K ++  Y+ LI G+C     +    L  +M+ + I P VV ++ L     +  ++  
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L  EM + G++ DT  Y + IDG CK   + +A  +   +    C  +IR+++ LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK+  +    ELF  +    ++AD VTYN +I   C  GK++ A +LF +M ++ V P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V++  L+ G   N E  K +E+  ++++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 204/373 (54%), Gaps = 8/373 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  L  K++    + + + YS +I+GLC+ G    A NLF EM I G        K D +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-------FKADII 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT+I G C  G  D   +LL  M  + I PDVV ++++I  F       EA+ L  EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ VT++ ++D  CK  ++++A+ +L+LM+  G  PN   +N L++G+C    +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ELF  M   G   +  +Y+ LI G+C+  ++E A  L+ EM+S+ ++P +V+Y  L
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + E+A ++F+++++  +  D   Y   I G+C    + +A +LF +L +   
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+++Y+ +I GLCK G L  A  LF  +       +  TYNI+I A   +G   K+  
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583

Query: 362 LFLDMEAKGVAPD 374
           L  +++  G + D
Sbjct: 584 LIEEIKRCGFSVD 596



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 194/403 (48%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      P +I +S L + + RT    + L+L ++M     E   +   +  
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLY 108

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +I+  C+   +  A   + ++      PD VT++++I G C     +EA  L   M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P ++T + +++ LC NGK+ +A  L++ M++ G +PN   Y  ++   C +G+ 
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   ME    K +   YSI+I+G CK+  ++ A +L++EM  KG K  ++ Y TL
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     + +   KL  +M +  +  D  A+   ID   K G + EA EL + +     
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LIDG CK  +L  A  +   +       ++ T+NI+I+  C    +D   +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  M  +GV  D V +NTL+ G     +     EL   M  R
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 7/324 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           + A L   +      P+V+ +S LI+   + G    A  L +EMI    + G+   PD V
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTV 353

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDG CKE  +DKA  +L  M  K   P++ T+N +I G+C AN  ++   LF +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  + VT++ ++   C+ GK+E A +L + M+   VRP+   Y  L+DG C  G  
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+F  +E    + ++  Y+I+I+G C   +++ A  L+  +  KG+KP V TYN +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +  A  LF +M+  G + +   Y   I      G   ++ +L   ++    
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW 325
            +D  +   ++D L   GRLK ++
Sbjct: 594 SVDASTVKMVVDML-SDGRLKKSF 616



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 144/309 (46%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V+Y   +R        ++A  LF EM     +P ++ FS +   + +  + +    L + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  + +++  C   +++ A      +  +G + +  ++S LING C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL L   M+  G KPT++T N L  GL    +V  A  L D M   G   +   Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            +  +CK+G    A+EL R +   K +LD   YS +IDGLCK G L  A+ LF+ +    
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
             AD++ Y  +I   C  G+ D    L  DM  + + PD VAF+ L+   ++  +  +  
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 396 ELLHRMDER 404
           EL   M +R
Sbjct: 338 ELHKEMIQR 346


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 232/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G +PN +TY  ++  +C++G T +A+ L  +M           K DAV
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ IIDGLCK+G +D A  L  +M+ K    D++ Y ++IRGFCYA   ++  +L  +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV FS ++D   K GK+ EA +L + MIQ G+ P+   Y +L+DGFC   ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  +   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+    VTYNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +ALE+F  +   K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELDI  Y+ +I G+C + ++  AW+LF SLP   +  DV TYNIMI  LC  G + +A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  ME  G +P+   +N L+   +   + +K  +L+  +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +P +IT + L+NGLC  G    A+ L + M+    E G   +P+ V
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV----ETGF--QPNEV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  +CK G    A ELL +M+++ I  D V Y+ +I G C     + A  LF EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +++ ++ ++   C  G+ ++ ++LL  MI+  + P+   ++ L+D F   G++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL   M   G   +  +Y+ LI+G+CK  +++ A  +   M+SKG  P + T+N L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + + ++   +LF +M   GV ADT  Y T I G C+ G +  A ELF+ +   + 
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY  L+DGLC +G  + A E+F  + +  +  D+  YNI+IH +C   K+D A D
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD   +N ++ G  +    S+   L  +M+E
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 208/390 (53%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N+ T S +IN  CR     +A +   ++I    E      PD V ++T+I+GLC E
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLINGLCLE 155

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A EL+ +M +    P ++T N+++ G C     ++A  L   M++ G QPN VT+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             ++  +CK+G+   A +LL  M +  ++ +A  Y+ ++DG C  G ++ A  LF  ME 
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K ++  Y+ LI G+C     +    L  +M+ + I P VV ++ L     +  ++  
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L  EM + G++ DT  Y + IDG CK   + +A  +   +    C  +IR+++ LI+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK+  +    ELF  +    ++AD VTYN +I   C  GK++ A +LF +M ++ V P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V++  L+ G   N E  K +E+  ++++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 204/373 (54%), Gaps = 8/373 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  L  K++    + + + YS +I+GLC+ G    A NLF EM I G        K D +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-------FKADII 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT+I G C  G  D   +LL  M  + I PDVV ++++I  F       EA+ L  EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ VT++ ++D  CK  ++++A+ +L+LM+  G  PN   +N L++G+C    +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ELF  M   G   +  +Y+ LI G+C+  ++E A  L+ EM+S+ ++P +V+Y  L
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + E+A ++F+++++  +  D   Y   I G+C    + +A +LF +L +   
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+++Y+ +I GLCK G L  A  LF  +       +  TYNI+I A   +G   K+  
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583

Query: 362 LFLDMEAKGVAPD 374
           L  +++  G + D
Sbjct: 584 LIEEIKRCGFSVD 596



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 199/408 (48%), Gaps = 25/408 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+ +TY++LI+G C+      A ++ + M++        C P+  
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG------CGPNIR 388

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+G CK   +D   EL  +M  + +  D VTYN++I+GFC       AK LF EM
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V+P++V++ +++D LC NG+ E+A ++ E + +  +  +  +YN ++ G C   +V
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +LF S+   G K +V +Y+I+I G CK   +  A  L+ +M   G  P   TYN L
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                      ++ KL +E++R G + D    R  +  L                R+LK 
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA---------------RMLKA 613

Query: 302 --ELDIRSYSCLIDGLC--KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             E D+ +++ L+   C  ++  +  A  LF ++       +VVTYN +I  L     + 
Sbjct: 614 GHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMIS 673

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   +   M  +G  P+ V  +T + G  + +     + LL +M+  N
Sbjct: 674 QVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF+EM           +P  + ++ +   + +    D   +L  QM+ K I  ++ T
Sbjct: 56  AVDLFQEMTRSRP------RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            + +I   C     + A     +++  G +P+ VTFS +++ LC  G++ EA +L++ M+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P     N L++G CL G+V+ A  L   M   G + N  +Y  ++   CK+ +  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ L  +M  + IK   V Y+ +  GL +   ++ AF LF+EM+  G  AD   Y T I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C  G   +  +L R +   K   D+ ++S LID   K G+L+ A EL   + +  + 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D VTY  +I   C + ++DKA+ +   M +KG  P+   FN L+ G  + N     +EL
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 398 LHRMDER 404
             +M  R
Sbjct: 410 FRKMSLR 416



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 144/309 (46%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V+Y   +R        ++A  LF EM     +P ++ FS +   + +  + +    L + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  + +++  C   +++ A      +  +G + +  ++S LING C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL L   M+  G KPT++T N L  GL    +V  A  L D M   G   +   Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            +  +CK+G    A+EL R +   K +LD   YS +IDGLCK G L  A+ LF+ +    
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
             AD++ Y  +I   C  G+ D    L  DM  + + PD VAF+ L+   ++  +  +  
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 396 ELLHRMDER 404
           EL   M +R
Sbjct: 338 ELHKEMIQR 346


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/403 (38%), Positives = 239/403 (59%), Gaps = 12/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G + + ++Y TLING+C+ G T  A+ L  ++       G + KP+  
Sbjct: 147 KALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVE 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID LCK   V +A  L  +M  K I+ DVVTY ++I GFC A+   EA  L  EM
Sbjct: 201 MYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV T+++++D LCK GK++EA  +L +M++  V+P+   Y+TLMDG+ L   +
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYEL 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F +M  MG   +V SY+ILING+CKNK ++ AL+L+ EM  K + P +VTY++L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR---I 298
             GL +  ++   + L DEM+  G+ A+   Y + IDGLCKNG++  A+ LF  ++   I
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C     +++ L+DGLCK GRLK A E F  L       DV  YN+MI+  C  G +++
Sbjct: 441 RPCSF---TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEE 497

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  +   ME  G  P+ V F+ ++    + +E  K  +LL +M
Sbjct: 498 ALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 207/382 (54%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P++IT + LIN  C  G      ++  +++    +      P  + 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQ------PHTIT 131

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+I GLC +G V+KA     ++  + I  D V+Y ++I G C   D+  A +L  ++ 
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  ++ I+D LCK   + EA  L   M   G+  +   Y TL+ GFC+  ++ 
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A ++ + ML   +KP V+TY+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F ++++++A  +F+ M   GV  D  +Y   I+G CKN  + EAL LF+ +      
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             I +YS LIDGLCKSGR+   W+L   +    + A+V+TYN +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F  M+ +G+ P    F  L+ G
Sbjct: 432 FNKMKDQGIRPCSFTFTILLDG 453



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 188/369 (50%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  K+     +PNV  Y+T+I+ LC+      A  LF EM             D V 
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG------ISADVVT 236

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+I G C    + +A  LL +M  K INP+V TYN ++   C      EAK +   M+
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V+P+V+T+S +MD      ++++A  +   M  +GV P+   Y  L++GFC    V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M        + +YS LI+G CK+  I     L  EM  +GI   V+TYN+L 
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   ++RA  LF++M+  G+   ++ +   +DGLCK G + +A E F+ L      
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYH 476

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD+  Y+ +I+G CK G L+ A  +   +     + + VT++I+I+AL    + DKA  L
Sbjct: 477 LDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKL 536

Query: 363 FLDMEAKGV 371
              M  +G+
Sbjct: 537 LRQMICRGL 545



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 202/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A + F ++      P +I ++ +++   +  H   A++L   + + G        +PD 
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKG-------IQPDL 94

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +    +I+  C  G +     +L ++  +   P  +T+ ++I+G C     N+A     +
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDK 154

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG++ + V++  +++ +CK G    A +L+  +     +PN  +YNT++D  C    
Sbjct: 155 LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQL 214

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  LF  M + G   +V +Y+ LI G+C   +++ A+ L +EM+ K I P V TYN 
Sbjct: 215 VSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  +V+ A  +   M +  V  D   Y T +DG      + +A  +F  + ++ 
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ SY+ LI+G CK+  +  A  LF  + +  ++  +VTY+ +I  LC  G++    
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           DL  +M  +G+  + + +N+L+ G  +N    + + L ++M ++
Sbjct: 395 DLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 159/313 (50%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++ +N ++  F      + A  L   +  +G+QP+++T +++++  C  G++     +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +++ G +P+   + TL+ G CL G+VN+A      + + G K +  SY  LING CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +  GA+ L  ++  +  KP V  YNT+   L +   V  A+ LF EM   G++AD   
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C    + EA+ L   + +     ++ +Y+ L+D LCK G++K A  +   + 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  DV+TY+ ++       ++ KA  +F  M   GV PD  ++  L+ G  +N    
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 393 KVVELLHRMDERN 405
           + + L   M ++N
Sbjct: 357 EALNLFKEMHQKN 369


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  285 bits (729), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/400 (38%), Positives = 231/400 (57%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   N +TY  LINGLC+ G T  AL +  ++       G +   + V
Sbjct: 141 EALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI------EGKLVNTNVV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIIDGLCK+  V  A  L  +M  K I P VVT++S+I GFC      +A RLF EM
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+  TF++++D LCK GK++EA  ++ +M++ GV P    YNTLMDG+CL   V
Sbjct: 255 VMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEV 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AK +   +  M    N  SY+I+ING+CK K ++ AL L+ EM  +GI P  VTYN+L
Sbjct: 315 GKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A++L DEM  + + AD   Y + ID  CKN ++ +A+ L + ++    
Sbjct: 375 IDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y+ LIDGLCK G+LK A ++F  L       +  TYNIMI+ LC +G  D+A  
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEV 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G+ PD V + T++      +E  K  +LL  M
Sbjct: 495 LLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 12/285 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC---RTGHTIVALNLFEEMINGNGEFGVVCKP 58
           EA  +   +   G EP V+TY+TL++G C     G     L++   M            P
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM---------RVAP 331

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           ++  Y  +I+G CK   VD+A  L  +M  + I P  VTYNS+I G C A     A  L 
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM +  +  ++VT++ ++D  CKN  +++A  L++ + + G++PN   YN L+DG C  
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A+++F  +   G   N ++Y+I+ING CK    + A  L S+M   GI P  VTY
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            T+   LF   + E+A KL  EM   GV    +  R  + G   N
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLN 556



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           +   M  +++ L+ ++ I   PN FV +  +  F      NR +++     S+   + + 
Sbjct: 24  RRSPMPSSAEPLKTVLSI---PNGFVVDNAVLSF------NRMRQI-RQTPSIVEFNKIL 73

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y I    +         LSL ++M SKG+KP + T + L      + Q+  AF +F ++
Sbjct: 74  TYLIKTKNHYPT-----VLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKI 128

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + G              LC NG + EAL     +  L   L+  +Y  LI+GLCK G+ 
Sbjct: 129 LKMG--------------LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQT 174

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A ++   +   ++  +VV Y+ +I  LC D  +  A+ L+ +M  K + P  V F++L
Sbjct: 175 RAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSL 234

Query: 382 MLG-CI 386
           + G CI
Sbjct: 235 IYGFCI 240


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/403 (37%), Positives = 240/403 (59%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G + N ++Y+TLING+C+ G T  A+ L  ++       G + KP+  
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVE 448

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCK   V +A  L  +M  K I+ DVVTY+++I GFC      EA  L  EM
Sbjct: 449 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEM 508

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V T+++++D L K GK++EA  +L +M++  V+P+ F YNTLM+G+ L   V
Sbjct: 509 VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEV 568

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F +M  MG   +V +Y+ILING+CK+K ++ AL+L+ EM  K + P  VTY++L
Sbjct: 569 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSL 628

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++   + L DEM+  G  AD   Y + IDGLCKNG++ +A+ LF  ++    
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +++ L+DGLCK GRLK A E+F  L       DV  YN+MI+  C  G +++A  
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   ME  G  P+ V F+ ++    + +E  K  +LL +M  R
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791



 Score =  230 bits (587), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/434 (32%), Positives = 225/434 (51%), Gaps = 40/434 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     KL A G + N ++Y+TLING+CR G T  A+    ++       G + KP+  
Sbjct: 81  EALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKID------GRLAKPNVE 134

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID LCK   V +A  L  +M  K I+ +VVTY+++I GFC      EA  L   M
Sbjct: 135 MYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVM 194

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV T+++++D LCK GK++EA  +L +M++  V+ N   Y+TLMDG+ L   V
Sbjct: 195 VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEV 254

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-------------- 227
            +A+ +F +M  MG   +V SY+I+ING+CK K ++ AL+L+ EM+              
Sbjct: 255 KKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKIL 314

Query: 228 --------------------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                KGI+P + T N L      + Q+   F +  ++ + G  
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             T    T I GLC  G + +AL     L     +L+  SY+ LI+G+CK G  + A +L
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +   +   +V  Y+ +I ALC    + +A+ LF +M  KG++ D V ++TL+ G   
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494

Query: 388 NNETSKVVELLHRM 401
             +  + + LL+ M
Sbjct: 495 VGKLKEAIGLLNEM 508



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 202/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P++ T + LIN  C  G      ++  +++           P  V 
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG------YPPSTVT 379

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             T+I GLC +G V KA     ++  +    + V+Y ++I G C   D+  A +L  ++ 
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  +S I+D LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       +V +Y+IL++   K  +++ A S+ + ML   +KP V TYNTL 
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   +++V++A  +F+ M   GV  D   Y   I+G CK+  + EAL LF+ +      
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +YS L+DGLCKSGR+   W+L   +      ADV+TYN +I  LC +G +DKA  L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M+ +G+ P+   F  L+ G  +        E+   +
Sbjct: 680 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 190/370 (51%), Gaps = 8/370 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  L  K+     +PNV  YST+I+ LC+      A  LF EM + G          D V
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG-------ISADVV 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I G C  G + +A  LL +M  K INPDV TY  ++          EAK +   M
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   V+P+V T++ +M+      ++++A  +   M  +GV P+   Y  L++GFC +  V
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M       +  +YS L++G CK+  I     L  EM  +G    V+TYN+L
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSL 663

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +++A  LF++M+  G+  +T+ +   +DGLCK G + +A E+F+ L     
Sbjct: 664 IDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LD+  Y+ +I G CK G L+ A  +   +     I + VT++I+I+AL    + DKA  
Sbjct: 724 HLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEK 783

Query: 362 LFLDMEAKGV 371
           L   M A+G+
Sbjct: 784 LLRQMIARGL 793



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 219/507 (43%), Gaps = 110/507 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++   G   NV+TYSTLI G C  G    AL L   M+           P+  
Sbjct: 151 EAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT------INPNVC 204

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-------------------------------- 89
            Y  ++D LCKEG V +AK +L  M                                   
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264

Query: 90  ---NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD----------------------- 123
               + PDV +YN +I GFC     ++A  LF EM+                        
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYS 324

Query: 124 -----------QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
                      +G+QP++ T +++++  C  G++     +L  +++ G  P+    NTL+
Sbjct: 325 TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 384

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G CL G+V +A      + + G + N  SY+ LING CK  +  GA+ L  ++  +  K
Sbjct: 385 KGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK 444

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V  Y+T+   L +   V  A+ LF EM   G++AD   Y T I G C  G + EA+ L
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL---------------FHSLPRGVLI 337
              + +     D+R+Y+ L+D L K G++K A  +               +++L  G L+
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564

Query: 338 --------------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                                DV TY I+I+  C    +D+A +LF +M  K + PD V 
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           +++L+ G  ++   S V +L+  M +R
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDR 651



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 204/438 (46%), Gaps = 42/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  P+V +Y+ +ING C+      ALNLF+EMI           P  +
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-------PPII 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+D   K      A  L  +++ K I PD+ T N +I  FC+         +  ++
Sbjct: 309 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI 368

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+ VT + ++  LC  G++++A    + ++  G + N   Y TL++G C  G  
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 428

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   ++    K NV  YS +I+  CK + +  A  L+SEM  KGI   VVTY+TL
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 488

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK------------------- 282
             G   + +++ A  L +EM    +  D   Y   +D L K                   
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548

Query: 283 -----------NGYIV-----EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                      NGY++     +A  +F  + ++    D+ +Y+ LI+G CKS  +  A  
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALN 608

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  + +  ++ D VTY+ ++  LC  G++    DL  +M  +G   D + +N+L+ G  
Sbjct: 609 LFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLC 668

Query: 387 RNNETSKVVELLHRMDER 404
           +N    K + L ++M ++
Sbjct: 669 KNGHLDKAIALFNKMKDQ 686



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 6/347 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V   T+I GLC +G V +A     ++  +    + V+Y ++I G C   D+  A + 
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             ++  +  +PNV  ++ I+D LCK   + EA  L   M   G+  N   Y+TL+ GFC+
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++  A  L   M       NV +Y+IL++  CK  +++ A S+ + ML   +K  V+T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+TL  G F +++V++A  +F+ M   GV  D  +Y   I+G CK   + +AL LF+ + 
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM- 299

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           IL     I  ++ ++D   K      A  L H L    +  D+ T NI+I+  C  G++ 
Sbjct: 300 ILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQIT 359

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDE 403
               +   +  +G  P  V  NTL+ G C++     +V + LH  D+
Sbjct: 360 FGFSVLAKILKRGYPPSTVTLNTLIKGLCLK----GQVKKALHFHDK 402



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 1/293 (0%)

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           D   +  +  +++ +G  P+ VT + ++  LC  G+++EA    + ++  G + N   Y 
Sbjct: 43  DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYA 102

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL++G C  G    A +    ++    K NV  Y+ +I+  CK + +  A  L+SEM  K
Sbjct: 103 TLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK 162

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           GI   VVTY+TL  G   + +++ A  L + M    +  +   Y   +D LCK G + EA
Sbjct: 163 GISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEA 222

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
             +   +     + ++ +YS L+DG      +K A  +F+++    +  DV +YNIMI+ 
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            C   ++DKA +LF +M      P  + FN ++    +    S  V L HR++
Sbjct: 283 FCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLE 334



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 106/194 (54%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++      P+ +TYS+L++GLC++G      +L +EM    G+       D +
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM-RDRGQ-----PADVI 658

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++IDGLCK G +DKA  L  +MKD+ I P+  T+  ++ G C      +A+ +F ++
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   +V  ++V++   CK G +EEA  +L  M + G  PNA  ++ +++        
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 182 NRAKELFVSMESMG 195
           ++A++L   M + G
Sbjct: 779 DKAEKLLRQMIARG 792



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 72/125 (57%), Gaps = 6/125 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF K+K  G  PN  T++ L++GLC+ G    A  +F++++            D  
Sbjct: 675 KAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL------DVY 728

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +I G CK+G +++A  +L +M++    P+ VT++ +I      +++++A++L  +M
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788

Query: 122 MDQGV 126
           + +G+
Sbjct: 789 IARGL 793


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  284 bits (726), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 164/457 (35%), Positives = 240/457 (52%), Gaps = 60/457 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G  P+V+TY TLINGLC+ G+T  A+ L   M+  N      C+P+  
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVF 202

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V +A  L  +M  K I+PD+ TYNS+I   C   +      L  EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY------------- 168
           +D  + P+VV+F+ ++D LCK GK+ EA  +++ MIQ GV PN   Y             
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 169 ----------------------NTLMDGFCLTGRVNRA-------------------KEL 187
                                 NTL++G+C   R+++A                    ++
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F +M   GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + P  VTY+TL  GL  
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           + +++ A  LF EM       +   YR  +D LCKN Y+ EA+ L + +     + DI+ 
Sbjct: 443 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
            +  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  LF +M+
Sbjct: 503 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 562

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             G   +   +NT+  G +RNNETS+ ++LL  M  R
Sbjct: 563 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 599



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 19/363 (5%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V +  ++  + K         L  QM    I P++ T + +I  FC+ N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  TF+ ++  +C  GK+ EA  L + MI  G RP+   Y TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G  + A  L  SM    C+ NVF+Y+ +I+  CK++++  A +L+SEM++KGI P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN+L   L  + + +    L +EM    +  D  ++ T +D LCK G + EA ++   + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E ++ +Y+ L+DG C    +  A ++F ++     + +V++YN +I+  C   ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 358 KA-H------------------DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           KA H                   +F  M  KG  P+ +++NTL+ G  +     K + L 
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418

Query: 399 HRM 401
             M
Sbjct: 419 GEM 421



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 13/306 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM------INGNGEFGV- 54
           EA  +F  +   GC PNVI+Y+TLING C+      A++    M      +N +    V 
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 55  ---VCK---PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
              VCK   P+ + Y T+I+G CK   +DKA  L  +M  + + PD VTY+++I G C+ 
Sbjct: 384 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 443

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
               +A  LF EM+     PN+VT+ +++D LCKN  + EA  LL+ +    + P+  V 
Sbjct: 444 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 503

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N  +DG C  G +  A++LF ++ S G + +V++YSI+ING C+   ++ A  L+ EM  
Sbjct: 504 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 563

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G       YNT+  G    ++  RA +L  EM   G +AD      F+  L  +G    
Sbjct: 564 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 623

Query: 289 ALELFR 294
             ++ R
Sbjct: 624 LKQILR 629



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 6/287 (2%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMDG 174
           F  M+     P+ V F+ ++  +    KM+  S LL L  Q+   G+ PN +  + L++ 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINS 105

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           FC   RV  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M+ +G +P 
Sbjct: 106 FCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPD 165

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY TL  GL ++     A +L   M +     + +AY T ID LCK+  + EA  LF 
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 225

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       DI +Y+ LI  LC     K    L + +    ++ DVV++N ++ ALC +G
Sbjct: 226 EMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           K+ +AHD+   M  +GV P+ V +  LM G    +E  + V++   M
Sbjct: 286 KVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 124/249 (49%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+++   P+   +N L+         +    L   M+S G   N+++  ILIN +C    
Sbjct: 52  MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A S+ +++L  G +P   T+ TL  G+    ++  A  LFD+M   G   D   Y T
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+GLCK G    A+ L  ++    C+ ++ +Y+ +ID LCK  ++  A+ LF  +    
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D+ TYN +IHALC   +      L  +M    + PD V+FNT++    +  + ++  
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291

Query: 396 ELLHRMDER 404
           +++ +M +R
Sbjct: 292 DVVDKMIQR 300



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 106/221 (47%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A   F  M  M    +   ++ L+    K K     LSL  +M S GI P + T + 
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L      +++V  AF +  ++ + G   DT  + T I G+C  G I EAL LF  +    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y  LI+GLCK G    A  L  S+ +     +V  YN +I +LC D ++ +A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +LF +M  KG++PD   +N+L+       E   V  LL+ M
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  284 bits (726), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 230/400 (57%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  +G +P+ +TY  ++N LC++G++ +AL+LF +M   N       K   V
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 275

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID LCK+G  D A  L  +M+ K I  DVVTY+S+I G C     ++  ++  EM
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VVTFS ++D   K GK+ EA +L   MI  G+ P+   YN+L+DGFC    +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M S GC+ ++ +YSILIN YCK K ++  + L+ E+ SKG+ P  +TYNTL
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G  +  ++  A +LF EM   GV      Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L I  Y+ +I G+C + ++  AW LF SL    +  DVVTYN+MI  LC  G + +A  
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M+  G  PD   +N L+   +  +     VEL+  M
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++      P+++T STLINGLC  G    AL L + M+    E+G   +PD V
Sbjct: 187 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV----EYGF--QPDEV 240

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK G    A +L  +M+++NI   VV Y+ VI   C     ++A  LF EM
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +VVT+S ++  LC +GK ++ +++L  MI   + P+   ++ L+D F   G++
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKEL+  M + G   +  +Y+ LI+G+CK   +  A  ++  M+SKG +P +VTY+ L
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 420

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +V+   +LF E+   G+  +T  Y T + G C++G +  A ELF+ +     
Sbjct: 421 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 480

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y  L+DGLC +G L  A E+F  + +  +   +  YNI+IH +C   K+D A  
Sbjct: 481 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 540

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD V +N ++ G  +    S+   L  +M E
Sbjct: 541 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 206/390 (52%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E ++ T + +IN  CR    + A ++          + +  +PD + ++T+++G C E
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 182

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A  L+ +M +    PD+VT +++I G C     +EA  L   M++ G QP+ VT+
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             +++ LCK+G    A  L   M +  ++ +   Y+ ++D  C  G  + A  LF  ME 
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +V +YS LI G C + + +    +  EM+ + I P VVT++ L     +  ++  
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++F  +    CE DI +YS LI+
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+ R+     LF  +    LI + +TYN ++   C  GK++ A +LF +M ++GV P
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             V +  L+ G   N E +K +E+  +M +
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQK 512



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 200/365 (54%), Gaps = 10/365 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF +++  G + +V+TYS+LI GLC  G       +  EMI  N        PD V
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +ID   KEG + +AKEL  +M  + I PD +TYNS+I GFC  N  +EA ++F  M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P++VT+S++++  CK  ++++  +L   +   G+ PN   YNTL+ GFC +G++
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AKELF  M S G   +V +Y IL++G C N E+  AL ++ +M    +   +  YN +
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    +V+ A+ LF  +   GV  D   Y   I GLCK G + EA  LFR ++   C
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI        L  + EL   +      AD  T  ++I  L +D ++DK+  
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS-- 642

Query: 362 LFLDM 366
            FLDM
Sbjct: 643 -FLDM 646



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  LF  +      P  I ++ L + + RT    + L   + M +NG        + D 
Sbjct: 82  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG-------IEHDM 134

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              T +I+  C++  +  A  +L +       PD +T+++++ GFC     +EA  L   
Sbjct: 135 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 194

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   +P++VT S +++ LC  G++ EA  L++ M++ G +P+   Y  +++  C +G 
Sbjct: 195 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 254

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF  ME    K +V  YSI+I+  CK+   + ALSL++EM  KGIK  VVTY++
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    + +   K+  EM    +  D   +   ID   K G ++EA EL+  +    
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LIDG CK   L  A ++F  +       D+VTY+I+I++ C   ++D   
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF ++ +KG+ P+ + +NTL+LG  ++ + +   EL   M  R
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 478



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P+ ITY++LI+G C+      A  +F+ M++        C+PD 
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 414

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I+  CK   VD    L  ++  K + P+ +TYN+++ GFC +   N AK LF E
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VVT+ +++D LC NG++ +A ++ E M +  +     +YN ++ G C   +
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 534

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  P   TYN 
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L         +  + +L +EM+  G +AD+   +  ID L
Sbjct: 595 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMD------ELCKNG----KMEEASQLLELMIQIGV 161
           N     F +++++G   +++ +S I +      E  +NG    K+ +A  L E MIQ   
Sbjct: 38  NRKASNFTQILEKGT--SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRP 95

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P    +N L      T + +        ME  G +H++++ +I+IN YC+ K++  A S
Sbjct: 96  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 155

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +       G +P  +T++TL  G     +V  A  L D M       D     T I+GLC
Sbjct: 156 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 215

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
             G + EAL L   +     + D  +Y  +++ LCKSG   +A +LF  +    + A VV
Sbjct: 216 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 275

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            Y+I+I +LC DG  D A  LF +ME KG+  D V +++L+ G   + +     ++L  M
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 402 DERN 405
             RN
Sbjct: 336 IGRN 339



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 143/309 (46%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           ++Y   +R        N+A  LF  M+     P  + F+ +   + +  + +      + 
Sbjct: 65  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 124

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  + +    +++ +C   ++  A  +      +G + +  ++S L+NG+C    
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A++L   M+    +P +VT +TL  GL    +V  A  L D M  +G   D   Y  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++ LCK+G    AL+LFR +     +  +  YS +ID LCK G    A  LF+ +    
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           + ADVVTY+ +I  LC DGK D    +  +M  + + PD V F+ L+   ++  +  +  
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 396 ELLHRMDER 404
           EL + M  R
Sbjct: 365 ELYNEMITR 373


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 230/400 (57%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  +G +P+ +TY  ++N LC++G++ +AL+LF +M   N       K   V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 246

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID LCK+G  D A  L  +M+ K I  DVVTY+S+I G C     ++  ++  EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VVTFS ++D   K GK+ EA +L   MI  G+ P+   YN+L+DGFC    +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M S GC+ ++ +YSILIN YCK K ++  + L+ E+ SKG+ P  +TYNTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G  +  ++  A +LF EM   GV      Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L I  Y+ +I G+C + ++  AW LF SL    +  DVVTYN+MI  LC  G + +A  
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M+  G  PD   +N L+   +  +     VEL+  M
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++      P+++T STLINGLC  G    AL L + M+    E+G   +PD V
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV----EYGF--QPDEV 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK G    A +L  +M+++NI   VV Y+ VI   C     ++A  LF EM
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +VVT+S ++  LC +GK ++ +++L  MI   + P+   ++ L+D F   G++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKEL+  M + G   +  +Y+ LI+G+CK   +  A  ++  M+SKG +P +VTY+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +V+   +LF E+   G+  +T  Y T + G C++G +  A ELF+ +     
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y  L+DGLC +G L  A E+F  + +  +   +  YNI+IH +C   K+D A  
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD V +N ++ G  +    S+   L  +M E
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 206/390 (52%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E ++ T + +IN  CR    + A ++          + +  +PD + ++T+++G C E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 153

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A  L+ +M +    PD+VT +++I G C     +EA  L   M++ G QP+ VT+
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             +++ LCK+G    A  L   M +  ++ +   Y+ ++D  C  G  + A  LF  ME 
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +V +YS LI G C + + +    +  EM+ + I P VVT++ L     +  ++  
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++F  +    CE DI +YS LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+ R+     LF  +    LI + +TYN ++   C  GK++ A +LF +M ++GV P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             V +  L+ G   N E +K +E+  +M +
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQK 483



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 200/365 (54%), Gaps = 10/365 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF +++  G + +V+TYS+LI GLC  G       +  EMI  N        PD V
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +ID   KEG + +AKEL  +M  + I PD +TYNS+I GFC  N  +EA ++F  M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P++VT+S++++  CK  ++++  +L   +   G+ PN   YNTL+ GFC +G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AKELF  M S G   +V +Y IL++G C N E+  AL ++ +M    +   +  YN +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    +V+ A+ LF  +   GV  D   Y   I GLCK G + EA  LFR ++   C
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI        L  + EL   +      AD  T  ++I  L +D ++DK+  
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS-- 613

Query: 362 LFLDM 366
            FLDM
Sbjct: 614 -FLDM 617



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  LF  +      P  I ++ L + + RT    + L   + M +NG        + D 
Sbjct: 53  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG-------IEHDM 105

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              T +I+  C++  +  A  +L +       PD +T+++++ GFC     +EA  L   
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   +P++VT S +++ LC  G++ EA  L++ M++ G +P+   Y  +++  C +G 
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF  ME    K +V  YSI+I+  CK+   + ALSL++EM  KGIK  VVTY++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    + +   K+  EM    +  D   +   ID   K G ++EA EL+  +    
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LIDG CK   L  A ++F  +       D+VTY+I+I++ C   ++D   
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF ++ +KG+ P+ + +NTL+LG  ++ + +   EL   M  R
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P+ ITY++LI+G C+      A  +F+ M++        C+PD 
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 385

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I+  CK   VD    L  ++  K + P+ +TYN+++ GFC +   N AK LF E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VVT+ +++D LC NG++ +A ++ E M +  +     +YN ++ G C   +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  P   TYN 
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L         +  + +L +EM+  G +AD+   +  ID L
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 8/302 (2%)

Query: 112 NEAKRLFIEMMDQGVQ----PNVVTFSVIMDELCKNG----KMEEASQLLELMIQIGVRP 163
           N     F +++++G       ++    +   E  +NG    K+ +A  L E MIQ    P
Sbjct: 9   NRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP 68

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
               +N L      T + +        ME  G +H++++ +I+IN YC+ K++  A S+ 
Sbjct: 69  TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                 G +P  +T++TL  G     +V  A  L D M       D     T I+GLC  
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + EAL L   +     + D  +Y  +++ LCKSG   +A +LF  +    + A VV Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I+I +LC DG  D A  LF +ME KG+  D V +++L+ G   + +     ++L  M  
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308

Query: 404 RN 405
           RN
Sbjct: 309 RN 310



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 143/309 (46%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           ++Y   +R        N+A  LF  M+     P  + F+ +   + +  + +      + 
Sbjct: 36  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  + +    +++ +C   ++  A  +      +G + +  ++S L+NG+C    
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A++L   M+    +P +VT +TL  GL    +V  A  L D M  +G   D   Y  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++ LCK+G    AL+LFR +     +  +  YS +ID LCK G    A  LF+ +    
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           + ADVVTY+ +I  LC DGK D    +  +M  + + PD V F+ L+   ++  +  +  
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 396 ELLHRMDER 404
           EL + M  R
Sbjct: 336 ELYNEMITR 344


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  283 bits (725), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 243/405 (60%), Gaps = 7/405 (1%)

Query: 1   MEAAALF-TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           ++ A LF  K+ A G   + I+Y TLI+GLC+ G T  AL+L +  ++GN     + +P+
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR-VDGN-----LVQPN 224

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V+Y TIID +CK   V++A +L  +M  K I+PDVVTY+++I GFC     N+A  LF 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ + ++P+V TF+++++  CK+GKM+E   + ++M++ G++PN   YN+LMDG+CL  
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            VN+AK +F +M   G   ++ SYSI+ING+CK K+ + A++L+ EM  K I P VVTY+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  GL +  ++  A +L D+M   GV      Y + +D LCK   + +A+ L   L+  
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++ +YS LI GLC+SG+L+ A ++F  L       +V TY IMI   C +G  ++A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L   ME  G  PD   +  ++L   + +E     +LL  M  R
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 194/362 (53%), Gaps = 6/362 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PNV+ Y+T+I+ +C+      A +LF EMI+          PD V Y+ +I G C  G 
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG------ISPDVVTYSALISGFCILGK 275

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           ++ A +L  +M  +NI PDV T+N ++  FC      E K +F  MM QG++PN VT++ 
Sbjct: 276 LNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +MD  C   ++ +A  +   M Q GV P+   Y+ +++GFC   + + A  LF  M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +V +YS LI+G  K+  I  AL L  +M  +G+ PT+ TYN++   L +IHQV++A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L  +++  G+  + + Y   I GLC++G + +A ++F  L +    L++ +Y+ +I G 
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  G    A  L   +     I D  TY I+I +L    + D A  L  +M A+GV P  
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575

Query: 376 VA 377
           +A
Sbjct: 576 IA 577



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF +L      P    ++ ++  L ++ H    L L ++M     EF  + KP+ V
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 121

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C+ G +  A  +  ++      PD +T+ ++I+G C      +A     ++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKV 181

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G   + +++  ++  LCK G+   A  LL+ +    V+PN  +YNT++D  C    V
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +LF  M S G   +V +YS LI+G+C   ++  A+ L+++M+ + IKP V T+N L
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++    +FD M + G+  +   Y + +DG C    + +A  +F T+     
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI+SYS +I+G CK  +   A  LF  + R  +I DVVTY+ +I  L   G++  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M  +GV P    +N+++    + ++  K + LL ++ ++
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 193/387 (49%), Gaps = 6/387 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N I+YS+             A++LF  ++  N        P A  +  I+  L K     
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRN------TTPPAFEFNKILGSLVKSKHYH 102

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
               L  +M+ + I P++V  N +I  FC       A  +F +++  G  P+ +TF+ ++
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC  G++++A    + ++ +G   +   Y TL+ G C  G    A +L   ++    +
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV  Y+ +I+  CK K +  A  L+SEM+SKGI P VVTY+ L  G   + ++  A  L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F++M    +  D + +   ++  CK+G + E   +F  +     + +  +Y+ L+DG C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
              +  A  +F+++ +G +  D+ +Y+IMI+  C   K D+A +LF +M  K + PD V 
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           +++L+ G  ++   S  ++L+ +M +R
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDR 429



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 37/241 (15%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K N  SYS     +  N +++ A+SL++ +L +   P    +N +   L +         
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M+  G+  +       I+  C+ G I  A  +F  +  +    D  +++ LI GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 317 KSGRLKIAWELFH-----------SLPRGVLI-------------------------ADV 340
             G+++ A+ LFH            +  G LI                          +V
Sbjct: 167 LKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V YN +I ++C    +++A DLF +M +KG++PD V ++ L+ G     + +  ++L ++
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 401 M 401
           M
Sbjct: 286 M 286



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 79/171 (46%)

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K   ++Y++        + V+ A  LF+ + R       + +   +  L K+ +    L 
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L + +     + ++ + + LI+  C+ G +  A+ +F  + +   + D +T+  +I  LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             G++ +A      + A G   D +++ TL+ G  +  ET   ++LL R+D
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/400 (38%), Positives = 234/400 (58%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   + ++Y TLINGLC+TG T  AL +  ++       G++ +P+ V
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKID------GLLVQPNVV 205

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID LCK+  V  A +L  +M  K I PDVVTY ++I G        EA  LF +M
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM 265

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+V TF++++D LCK G+M++A  +L +MI+ GV  N   YN+LMDG+ L  + 
Sbjct: 266 LLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQE 325

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A  +F +M   G   +V SYSI+ING CK K ++ A++L+ EM SK + P  VTYN+L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A+ L +EM   G  AD   Y + +D LCKN  + +A+ L   ++    
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +I +Y+ L+DGLCK+GRLK A  ++  L       DV  YN+M++ LC +G  D+A  
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME  G  PD V + TL+     N++  K V+LL  M
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 204/373 (54%), Gaps = 6/373 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P++ T++ LIN  C  GH   A ++  ++      F +   PD V  TT+I GLC  G 
Sbjct: 96  QPDLFTFNILINCFCHLGHLNFAFSVLAKI------FKLGFHPDTVTITTLIKGLCLNGK 149

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V +A      +  K  + D V+Y ++I G C   ++  A ++  ++    VQPNVV ++ 
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+D LCK+  +  AS L   MI   + P+   Y TL+ G  + GR+  A  LF  M    
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K +V++++IL++G CK  E++ A ++ + M+ +G+   +VTYN+L  G F + Q  +A 
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +F+ M R GV  D  +Y   I+GLCK   + EA+ LF+ +       +  +Y+ LIDGL
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            K GR+  AW+L + +      ADV+TY+ ++ ALC + ++DKA  L   ++ +G+ P+ 
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449

Query: 376 VAFNTLMLGCIRN 388
             +  L+ G  +N
Sbjct: 450 YTYTILVDGLCKN 462



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 194/370 (52%), Gaps = 6/370 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  K+     +PNV+ Y+T+I+ LC+    I A +L  EMI           PD V 
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKR------IFPDVVT 241

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+I G    G + +A  L  QM  KNI PDV T+N ++ G C   +  +A+ +   M+
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QGV  N+VT++ +MD      +  +A+ +   M + GV P+   Y+ +++G C T  V+
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVD 361

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M S     N  +Y+ LI+G  K   I  A  L +EM ++G    V+TY++L 
Sbjct: 362 EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL 421

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L + HQV++A  L  +++  G+  + + Y   +DGLCKNG + +A  +++ L I    
Sbjct: 422 DALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYH 481

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD++ Y+ +++GLCK G    A  L   +     I D VTY  ++ AL  + K DKA  L
Sbjct: 482 LDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKL 541

Query: 363 FLDMEAKGVA 372
             +M  +G A
Sbjct: 542 LREMIVQGSA 551



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 179/342 (52%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  I+  L K      A     QM+ K I PD+ T+N +I  FC+    N A  +  ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+ VT + ++  LC NGK+ EA    + +I  G   +   Y TL++G C TG   
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   ++ +  + NV  Y+ +I+  CK+K +  A  L SEM+ K I P VVTY TL 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +++ A  LF++M    +  D + +   +DGLCK G + +A  +   +     +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +Y+ L+DG     +   A  +F+++ R  +  DV +Y+IMI+ LC    +D+A +L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F +M +K +AP+ V +N+L+ G ++    S   +L++ M  R
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNR 408


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/403 (37%), Positives = 239/403 (59%), Gaps = 8/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G +P+  T++TL+ GLC  G    AL++F++M+ G G      +P+ V 
Sbjct: 110 ALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV-GEG-----FQPNVVT 163

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+++GLCK+  + +A  L  +M  K I+PD+ TYNS+I   C   +      L  EM+
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + PNVV+ ++++D LCK GK+ EA  ++++MIQ GV P+   Y  LMDG CL   ++
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M   GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + P  +TY+TL 
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + +++ A  LF+EM   G   +   Y   +D LCKN  + EA+ L + +     +
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            D++ Y+  IDG+C++G L+ A +LF +L PRG L  DV T+NIMI  LC  G +D+A  
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG-LQPDVWTHNIMIRGLCKRGLLDEASK 462

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+  G   +   +NT+  G ++NN+TS+ ++LL  M  R
Sbjct: 463 LFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 188/382 (49%), Gaps = 29/382 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING---------NGEF 52
           EA  +F K+   G +PNV+TY TL+NGLC+      ALNLF EMI           N   
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203

Query: 53  GVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
             +C                     P+ V    ++D LCKEG V +A +++  M    + 
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 263

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDVVTY +++ G C  ++ +EA ++F  M+  G   NVV+++ +++  CK  ++++A  L
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M +  + PN   Y+TL+ G C  GR+  A  LF  M + G   N+ +YSIL++  CK
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  +  A++L   +    + P V  YN    G+     +E A  LF  +   G+  D W 
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I GLCK G + EA +LFR +    C  +  +Y+ +  GL ++ +   A +L   + 
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEML 503

Query: 333 RGVLIADVVTYNIMIHALCADG 354
                ADV T  +++  L  DG
Sbjct: 504 ARGFSADVSTTALLVKMLSDDG 525



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P +  ++ L+  + +  H    L+L ++M      FG+   PD  
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM----DSFGI--PPDVY 92

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I+  C    VD A  +L ++      PD  T+ +++RG C      EA  +F +M
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVVT+  +M+ LCK+ ++ EA  L   MI  G+ P+ F YN+L+   C     
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                L   M       NV S +I+++  CK  ++  A  +   M+  G++P VVTY  L
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A K+FD M R+G   +  +Y T I+G CK   I +A+ LF  +   + 
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI GLC  GRL+ A  LF+ +     I ++VTY+I++  LC + ++ +A  
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   +E   + PD   +N  + G  R  +     +L   +  R
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M++ +        P    +  ++  + K         L  +M    I PDV T
Sbjct: 40  ALSSFHRMLHMHP------PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYT 93

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              VI  FC+ N  + A  +  +++  G QP+  TF+ ++  LC  GK+ EA  + + M+
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   Y TLM+G C   ++  A  LF  M + G   ++F+Y+ LI+  C   E +
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
              +L +EM+   I P VV+ N +   L +  +V  A  + D M + GV  D   Y   +
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           DG C    + EA+++F  +    C  ++ SY+ LI+G CK  R+  A  LF  + R  LI
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + +TY+ +IH LC  G++  A  LF +M A G  P+ V ++ L+    +N+  ++ + L
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 398 LHRMDERN 405
           L  ++  N
Sbjct: 394 LKAIEGSN 401



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 169/326 (51%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   +  P +  +  ++         +    L  +M   G+ P+V T ++
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   +++ A  +L  ++++G +P+   + TL+ G C+ G++  A ++F  M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV +Y  L+NG CK++++  AL+L+SEM++KGI P + TYN+L   L  + + +   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L +EM +  +  +  +    +D LCK G + EA ++   +     E D+ +Y+ L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C    +  A ++F  + R   + +VV+YN +I+  C   ++DKA  LF +M  + + P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + ++TL+ G          + L + M
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEM 362



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P+V  Y+  I+G+CR G    A +LF  +       G+  +PD  
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL----APRGL--QPDVW 442

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GLCK G +D+A +L  +M +     +  TYN++ +G    N ++ A +L  EM
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + +G   +V T ++++  L  +G  +   Q+L
Sbjct: 503 LARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/403 (39%), Positives = 231/403 (57%), Gaps = 21/403 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   N ++Y TLINGLC+ G T  AL +  ++       G +   D V
Sbjct: 159 EALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQI------EGKLVSTDVV 212

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIIDGLCK+  V+ A EL  +M  K I+P VVT NS+I G+C      EA  L  EM
Sbjct: 213 MYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREM 272

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V TF++++D LCK GK++EA   + +M++ GV P+   Y++LMDG+CL   V
Sbjct: 273 VLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEV 332

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +               YSI+ING+CK K ++ ALSL+ EM  + I P  VTYN+L
Sbjct: 333 NKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A++L DEM+  G  AD   Y + ID LCKN ++ +A+ L + ++    
Sbjct: 378 IDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGI 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+ +Y+ LIDGLCK GRLK A  +F  L        V TY IMI+ LC +G +++A  
Sbjct: 438 QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAET 497

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  PD V   T++     N++  +  +LL  M  R
Sbjct: 498 LLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 193/398 (48%), Gaps = 26/398 (6%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F ++      P+VI +  +++ L +  H    ++LF ++     EF  + KP+ V  + +
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQL-----EFNGI-KPNIVSLSIL 112

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I+  C  G +  A  +  ++     +P+ +T  ++++GFC  +   EA      ++  G 
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
             N V++  +++ LCK G+   A Q+L  +    V  +  +Y+T++DG C    VN A E
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L+  M +      V + + LI GYC   + + A  L  EM+ K I P V T+N L   L 
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC 292

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---------------NGY-----I 286
           +  +++ A      M + GV  D   Y + +DG C                NG+     +
Sbjct: 293 KEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMV 352

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +AL LF  +R  +   D  +Y+ LIDGLCKSGR+  AWEL   +      AD++TYN +
Sbjct: 353 DKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSL 412

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           I ALC +  +DKA  L   ++ +G+  D   +N L+ G
Sbjct: 413 IDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDG 450



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 171/367 (46%), Gaps = 20/367 (5%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+  L K         L  Q++   I P++V+ + +I  +C+      A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++  G  PN +T + ++   C N K++EA    + ++ +G   N   Y TL++G C 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A ++   +E      +V  YS +I+G CK+K +  A  LYSEM++K I PTVVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
            N+L  G   + Q + AF L  EM    +  D + +   +D LCK G I EA      + 
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 298 ILKCELDIRSYSCLID--------------------GLCKSGRLKIAWELFHSLPRGVLI 337
                 D+ +YS L+D                    G CK   +  A  LF+ +    + 
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D VTYN +I  LC  G++  A +L  +M   G   D + +N+L+    +N+   K + L
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 398 LHRMDER 404
           + ++ ++
Sbjct: 429 VKKIKDQ 435



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 133/253 (52%), Gaps = 21/253 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+TYS+L++G C       A +                     +Y+ +I+G CK 
Sbjct: 311 GVMPDVVTYSSLMDGYCLVNEVNKAKH---------------------VYSIVINGFCKI 349

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VDKA  L  +M+ + I PD VTYNS+I G C +   + A  L  EM D G   +++T+
Sbjct: 350 KMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITY 409

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LCKN  +++A  L++ +   G++ + + YN L+DG C  GR+  A+ +F  +  
Sbjct: 410 NSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLI 469

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    V++Y+I+ING C    +  A +L S+M   G  P  VT  T+   LFE  + ER
Sbjct: 470 KGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNER 529

Query: 254 AFKLFDEMQRHGV 266
           A KL  EM   G+
Sbjct: 530 AEKLLREMIARGL 542



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 101/207 (48%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V  +  +++   K K     +SL+ ++   GIKP +V+ + L      + Q+  AF +F
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            ++ + G   +T    T + G C N  + EAL     +  L    +  SY  LI+GLCK 
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G  + A ++   +   ++  DVV Y+ +I  LC D  ++ A++L+ +M  K ++P  V  
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTL 249

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           N+L+ G     +  +   LL  M  +N
Sbjct: 250 NSLIYGYCIVGQFKEAFGLLREMVLKN 276


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 146/399 (36%), Positives = 230/399 (57%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++   G EP+VI+Y+TLINGLC +G+T +A+++F++M   NG     CKP+ V 
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM-EQNG-----CKPNVVT 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIID LCK+  V+ A + L +M  + I PD +TYNS++ G C     NEA RLF  M 
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +P+VVT+++I+D L K+  + +A+  L  M+  G+ P+   Y T++ G C  G++N
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  ME  GCK +V +Y+ +I+  CK++ +  A+   SEM+ +GI P  VTY+T+ 
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + Q++ A +LF EM    V  +T  +   +DGLC+ G + EA  +F T+     E
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +Y+ L++G C   ++  A ++F  +       D+ +YNI+I+  C   +MDKA  L
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M  K + P+ V +NT+M G           EL  +M
Sbjct: 536 LTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574



 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 142/362 (39%), Positives = 224/362 (61%), Gaps = 6/362 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA   +++   G  P+V+TY+T+++GLC  G    A+ LF++M          CKPD V
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG------CKPDVV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V+ A E L +M D+ I P+ VTY++++ GFC     +EA +LF EM
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN +TFS+++D LC+ G + EA  + E M + GV PN + YN LM+G+CL  ++
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A+++F  M   GC  ++ SY+ILINGYC ++ ++ A +L ++M  K + P  VTYNT+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++  A +LF +M   G+      Y   ++GLCK+G++ EAL+LF++++  K 
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI  Y+ LI+G+   G+L++A  LF  L    +     TYN+MI  L  +G  D+A++
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674

Query: 362 LF 363
           LF
Sbjct: 675 LF 676



 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 226/396 (57%), Gaps = 9/396 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++  FG    V + + LIN LCR  H   A++++ +M      F +  +PD + +TT
Sbjct: 115 LCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM------FKLGIQPDVITFTT 168

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G+C EG +  A EL  +M      PDV++YN++I G C + ++N A  +F +M   G
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +PNVVT++ I+D LCK+  + +A   L  M+  G+ P+A  YN+++ G C  G++N A 
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  ME  GCK +V +Y+I+I+   K++ +  A    SEM+ +GI P VVTY T+  GL
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             + Q+  A +LF +M++ G   D  AY T ID LCK+  + +A+E    +       + 
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS ++ G C  G+L  A +LF  +    ++ + +T++I++  LC +G + +A  +F  
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET 468

Query: 366 MEAKGVAPDCVAFNTLMLG-CIR--NNETSKVVELL 398
           M  KGV P+   +N LM G C+R   NE  KV E++
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504



 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 214/383 (55%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A    +++   G  P+ ITY+++++GLC  G    A  LF+ M   NG     CKPD V
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM-EQNG-----CKPDVV 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID L K+  V+ A + L +M D+ I PDVVTY +++ G CY    NEA RLF +M
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+VV ++ I+D LCK+  + +A + L  M+  G+ PNA  Y+T++ GFC  G++
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +LF  M       N  ++SIL++G C+   +  A  ++  M  KG++P + TYN L
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     ++  A K+F+ M   G A D  +Y   I+G C +  + +A  L   + + K 
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ ++ GLC  GRL  A ELF  +    ++  ++TY+I+++ LC  G +D+A  
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF  M+ K + PD + +  L+ G
Sbjct: 605 LFKSMKEKKLEPDIILYTILIEG 627



 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 218/399 (54%), Gaps = 6/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  GC+P+V+TY+ +I+ L +      A +   EM++          PD V
Sbjct: 286 EATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG------IPPDVV 339

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTTI+ GLC  G +++A  L  +M+ K   PDVV YN++I   C     N+A     EM
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PN VT+S I+   C  G+++EA+QL + M+   V PN   ++ L+DG C  G V
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +F +M   G + N+++Y+ L+NGYC   ++  A  ++  M+ KG  P + +YN L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     ++++A  L  +M    +  +T  Y T + GLC  G +++A ELF+ +     
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +YS L++GLCK G L  A +LF S+    L  D++ Y I+I  +   GK++ A  
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           LF  + A G+ P    +N ++ G ++   + +  EL  +
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 214/402 (53%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F K++  GC+PNV+TY+T+I+ LC+      A++   EM+ G G       PDA+ 
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV-GRG-----IPPDAIT 270

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +I+ GLC  G +++A  L  +M+     PDVVTYN +I         N+A     EM+
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           DQG+ P+VVT++ I+  LC  G++ EA +L + M Q G +P+   YNT++D  C    VN
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E    M   G   N  +YS +++G+C   +++ A  L+ EM+ + + P  +T++ L 
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   V  A  +F+ M   GV  + + Y   ++G C    + EA ++F  +    C 
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCA 510

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ SY+ LI+G C S R+  A  L   +    L  + VTYN ++  LC  G++  A +L
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQEL 570

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M + G+ P  + ++ L+ G  ++    + ++L   M E+
Sbjct: 571 FKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 170/299 (56%), Gaps = 6/299 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A    +++   G  PN +TYST+++G C  G    A  LF+EM+  N        P+ +
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN------VMPNTL 444

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ ++DGLC+EG V +A+ +   M +K + P++ TYN+++ G+C     NEA+++F  M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++ +++++++  C + +M++A  LL  M    + PN   YNT+M G C  GR+
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ELF  M S G    + +YSIL+NG CK+  ++ AL L+  M  K ++P ++ Y  L
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G+F   ++E A  LF ++   G+      Y   I GL K G   EA ELFR  +++K
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 195/405 (48%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P+++ +   +  + +       + L  +M      FGV       
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM----DLFGVT----HT 127

Query: 62  IYT--TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +Y+   +I+ LC+   VD A  +  +M    I PDV+T+ ++I G C       A  L+ 
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G +P+V++++ +++ LC +G    A  + + M Q G +PN   YNT++D  C   
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            VN A +    M   G   +  +Y+ +++G C   ++  A  L+  M   G KP VVTYN
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +   L++   V  A     EM   G+  D   Y T + GLC  G + EA+ LF+ +   
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ D+ +Y+ +ID LCK   +  A E    +    +  + VTY+ ++H  C  G++D+A
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             LF +M  + V P+ + F+ L+ G  +    S+   +   M E+
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK 472



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 180/349 (51%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P  V +   +  + K         L  QM    +   V + N +I   C  N  + A  
Sbjct: 90  RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVS 149

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++ +M   G+QP+V+TF+ +++ +C  GK++ A +L   M++ G  P+   YNTL++G C
Sbjct: 150 VWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLC 209

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +G  N A  +F  ME  GCK NV +Y+ +I+  CK++ +  A+   SEM+ +GI P  +
Sbjct: 210 NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAI 269

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN++  GL  + Q+  A +LF  M+++G   D   Y   ID L K+  + +A +    +
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +Y+ ++ GLC  G+L  A  LF  + +     DVV YN +I +LC D  +
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + A +   +M  +G+ P+ V ++T++ G     +  +  +L   M  RN
Sbjct: 390 NDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 9/318 (2%)

Query: 92  NPDVVTYNSVIRGFCYANDSN-----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           NP +   N    GF  +N SN     +A   F  M     +P++V F   +  + K  + 
Sbjct: 54  NPSLPKKNG---GFA-SNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQY 109

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                L   M   GV    +  N L++  C    V+ A  ++  M  +G + +V +++ L
Sbjct: 110 STVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTL 169

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING C   +I+ A+ LY+EM+  G +P V++YNTL  GL        A  +F +M+++G 
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y T ID LCK+  + +A++    +       D  +Y+ ++ GLC  G+L  A  
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATR 289

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  + +     DVVTYNI+I +L  D  ++ A D   +M  +G+ PD V + T++ G  
Sbjct: 290 LFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLC 349

Query: 387 RNNETSKVVELLHRMDER 404
              + ++ + L  +M+++
Sbjct: 350 YLGQLNEAIRLFKKMEQK 367



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF K+ + G  P ++TYS L+NGLC+ GH   AL LF+ M     E      PD 
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE------PDI 618

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF-- 118
           ++YT +I+G+   G ++ AK L  ++    I P   TYN +I+G      S+EA  LF  
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678

Query: 119 IEMMDQGV 126
            +MM   V
Sbjct: 679 WKMMKHNV 686


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-----EEVSHIIPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA +L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+     TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 230/416 (55%), Gaps = 18/416 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P  +
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM----EDGL--QPTQI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK+G    A  LL +M++  +I P+VV Y+++I   C     ++A+ LF E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P++ T++ ++   C +G+  +A QLL+ M++  + P+   YN L++ F   G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+EL+  M   G   N  +YS +I+G+CK   ++ A  ++  M +KG  P ++T+NT
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM   G+ ADT  Y T I G    G +  AL+L + +    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-----------SLPRGVLIADVVTYNIMIHA 349
              DI +   L+DGLC +G+LK A E+F            S P   +  DV TYNI+I  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 42/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+ +      P+V+ +  L+  + R     + ++L+++M        + C  D  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I   C    +  A     ++    ++PDVVT+N+++ G C  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
            +   +PNVVTF+ +M+ LC+ G++ EA  LL+ M++ G++P    Y T++DG       
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 175 -----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                         C  GR + A+ LF  M+  G   ++F+Y+ 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I G+C +     A  L  EML + I P VVTYN L     +  +   A +L+DEM   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +T  Y + IDG CK   +  A  +F  +    C  ++ +++ LIDG C + R+    
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL H +    L+AD  TYN +IH     G ++ A DL  +M + G+ PD V  +TL+ G 
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475

Query: 386 IRNNETSKVVELLHRMDE 403
             N +    +E+   M +
Sbjct: 476 CDNGKLKDALEMFKVMQK 493



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITYS++I+G C+      A ++F  M          C P+ +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  G+ P++VT   ++D LC NGK++                                  
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 99/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  L  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LFH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-----EEVSHIIPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA +L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+     TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 230/416 (55%), Gaps = 18/416 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P  +
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM----EDGL--QPTQI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK+G    A  LL +M++  +I P+VV Y+++I   C     ++A+ LF E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P++ T++ ++   C +G+  +A QLL+ M++  + P+   YN L++ F   G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+EL+  M   G   N  +YS +I+G+CK   ++ A  ++  M +KG  P ++T+NT
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM   G+ ADT  Y T I G    G +  AL+L + +    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-----------SLPRGVLIADVVTYNIMIHA 349
              DI +   L+DGLC +G+LK A E+F            S P   +  DV TYNI+I  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 42/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+ +      P+V+ +  L+  + R     + ++L+++M        + C  D  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I   C    +  A     ++    ++PDVVT+N+++ G C  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
            +   +PNVVTF+ +M+ LC+ G++ EA  LL+ M++ G++P    Y T++DG       
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 175 -----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                         C  GR + A+ LF  M+  G   ++F+Y+ 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I G+C +     A  L  EML + I P VVTYN L     +  +   A +L+DEM   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +T  Y + IDG CK   +  A  +F  +    C  ++ +++ LIDG C + R+    
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL H +    L+AD  TYN +IH     G ++ A DL  +M + G+ PD V  +TL+ G 
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475

Query: 386 IRNNETSKVVELLHRMDE 403
             N +    +E+   M +
Sbjct: 476 CDNGKLKDALEMFKVMQK 493



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITYS++I+G C+      A ++F  M          C P+ +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  G+ P++VT   ++D LC NGK++                                  
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 99/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LFH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-----EEVSHIIPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA +L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+     TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 9/368 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + +    D    L  +M+ K I  D+ +
Sbjct: 63  AIDLFSDMLRSRP------LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N +I+ FC  +    A   F ++   G+ P+VVTF+ ++  LC   ++ EA  L   M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +   RPN   + TLM+G C  GR+  A  L   M   G +    +Y  +++G CK  +  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 218 GALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            AL+L  +M     I P VV Y+ +   L +  +   A  LF EMQ  G+  D + Y + 
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGV 335
           I G C +G   +A +L + +   K   D+ +Y+ LI+   K G+   A EL+   LPRG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I + +TY+ MI   C   ++D A  +F  M  KG +P+ + FNTL+ G          +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 396 ELLHRMDE 403
           ELLH M E
Sbjct: 416 ELLHEMTE 423



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITYS++I+G C+      A ++F  M          C P+ +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  G+ P++VT   ++D LC NGK++                                  
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 99/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LFH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 150/403 (37%), Positives = 228/403 (56%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  +GCE N ITY  ++N +C++G+T +AL+LF +M   +       K   V
Sbjct: 192 EALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERS------IKASVV 245

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID LCK+G +D A  L  +M+ K I  DVV Y+S+I G C     ++  ++  EM
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVVTFS ++D   K GK+ EA +L   M+  G+ P+   Y++L+DGFC   R+
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M S GC+ N+ +YSILIN YCK K ++  + L+ E+ SKG+    VTYNTL
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++  A +LF EM   GV      Y   +DGLC NG + +ALE+F  ++  + 
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L I  Y+ +I G+C + ++  AW LF SL    +  DV+TYN+MI  LC  G + +A  
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  M+  G AP    +N L+   +  +     VEL+  M  R
Sbjct: 546 LFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMR 588



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 217/426 (50%), Gaps = 41/426 (9%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG EPN IT+STLING C  G    A+ L + M+       +  +P+ V   T+I+GLC 
Sbjct: 133 FGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE------MKYRPNVVTVNTLINGLCL 186

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G V +A  L+ +M       + +TY  V+   C + ++  A  LF +M ++ ++ +VV 
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246

Query: 133 FSVIMDELCKNGKMEEA-----------------------------------SQLLELMI 157
           +S+++D LCK+G +++A                                   +++L  MI
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              + PN   ++ L+D F   G++  AKEL+  M + G   +  +YS LI+G+CK   + 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +   M+SKG +P +VTY+ L     +  +V+   +LF E+   G+ ADT  Y T +
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C++G +  A ELF+ +        + +Y  L+DGLC +G L+ A E+F  + +  +I
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             +  YNI+IH +C   K+D A  LF  +  KGV PD + +N ++ G  +    S+   L
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546

Query: 398 LHRMDE 403
             +M E
Sbjct: 547 FRKMKE 552



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 204/390 (52%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E N+ T + +IN  CR    + A ++    +    +FG   +P+ + ++T+I+G C E
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRAL----KFGF--EPNTITFSTLINGFCLE 152

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A  L+ +M +    P+VVT N++I G C      EA  L   M+  G + N +T+
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             +++ +CK+G    A  L   M +  ++ +   Y+ ++D  C  G ++ A  LF  ME 
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +V +YS +I G C +   +    +  EM+ + I P VVT++ L     +  ++  
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++   +    CE +I +YS LI+
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+ R+     LF  +    L+AD VTYN ++   C  GK++ A +LF +M ++GV P
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             V +  L+ G   N E  K +E+  +M +
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQK 482



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 151/277 (54%), Gaps = 6/277 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++ A G  P+ ITYS+LI+G C+      A  + + M++        C+P+ 
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG------CEPNI 384

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I+  CK   VD    L  ++  K +  D VTYN++++GFC +   N AK LF E
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VVT+ +++D LC NG++++A ++ E M +  +     +YN ++ G C   +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  P+  TYN 
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNI 564

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L         V  + +L +EM+  G AAD    +  +
Sbjct: 565 LIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 164/326 (50%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V++A +L   M      P ++ ++ +        + +       EM   G++ N+ T ++
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  K+  A  ++   ++ G  PN   ++TL++GFCL GRV+ A  L   M  M 
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV + + LING C    +  AL L   M+  G +   +TY  +   + +      A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LF +M+   + A    Y   ID LCK+G + +AL LF  + +   + D+ +YS +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GR     ++   +    +I +VVT++ +I     +GK+ +A +L+ +M A+G+APD 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + +++L+ G  + N   +  ++L  M
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLM 375



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 147/309 (47%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V+Y   +R        NEA  LF  M+     P+++ FS +   + +  + +      + 
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N +  N +++ FC   ++  A  +       G + N  ++S LING+C    
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A++L   M+    +P VVT NTL  GL    +V  A  L D M ++G  A+   Y  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++ +CK+G    AL+LFR +     +  +  YS +ID LCK G L  A  LF+ +    
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           + ADVV Y+ +I  LC DG+ D    +  +M  + + P+ V F+ L+   ++  +  +  
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 396 ELLHRMDER 404
           EL + M  R
Sbjct: 335 ELYNEMVAR 343



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 11/299 (3%)

Query: 118 FIEMMDQG-VQPNVVTFSVIMD------ELCKNG----KMEEASQLLELMIQIGVRPNAF 166
           F +++D+G ++ +++ +S I +      E  +NG    K+ EA  L E MIQ    P+  
Sbjct: 11  FTQIIDKGTLRISLLHYSCISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLI 70

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            ++ L          +        M+  G +HN+++ +I+IN +C+ +++  A S+    
Sbjct: 71  DFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRA 130

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G +P  +T++TL  G     +V  A  L D M       +     T I+GLC  G +
Sbjct: 131 LKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EAL L   +    CE +  +Y  +++ +CKSG   +A +LF  +    + A VV Y+I+
Sbjct: 191 TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIV 250

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           I +LC DG +D A  LF +ME KG+  D VA+++++ G   +       ++L  M  RN
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   + + GCEPN++TYS LIN  C+       + LF E+       G+V   D V
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEI----SSKGLV--ADTV 420

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G C+ G ++ AKEL  +M  + + P VVTY  ++ G C   +  +A  +F +M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               +   +  +++I+  +C   K+++A  L   +   GV+P+   YN ++ G C  G +
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSL 540

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M+  GC  +  +Y+ILI  +     +  ++ L  EM  +G      T   +
Sbjct: 541 SEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMV 600

Query: 242 FIGL 245
            + L
Sbjct: 601 VVML 604


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 225/374 (60%), Gaps = 7/374 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+ +T  +L+NG CR      A++L ++M+    E G   KPD V 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  IID LCK   V+ A +   +++ K I P+VVTY +++ G C ++  ++A RL  +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+T+S ++D   KNGK+ EA +L E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+    VTYNTL 
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +AL +F  ++  + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 363 FLDMEAKGVAP-DC 375
           +  M+ +G+   DC
Sbjct: 493 YTKMKQEGLMKNDC 506



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 14/372 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  K+   G +P+++ Y+ +I+ LC+T     A + F+E I   G      +P+ V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKG-----IRPNVV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++GLC       A  LL  M  K I P+V+TY++++  F       EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++VT+S +++ LC + +++EA+Q+ +LM+  G   +   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI P + TYN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ ++ GLC  G L     L+  + +  L+ +  T         +DG +  + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAE 518

Query: 362 LFLDMEAKGVAP 373
           L   M + G AP
Sbjct: 519 LIKKMLSCGYAP 530



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + K    D    L  +M+   I  D+ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D   Y + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +  I EA ++F  +    C  D+ SY+ LI+G CK+ R++   +LF  + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           ++ VTYN +I      G +DKA + F  M+  G++PD   +N L+ G   N E  K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 398 LHRMDER 404
              M +R
Sbjct: 423 FEDMQKR 429



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 155/293 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+A  LF +M+     P++V F+ ++  + K  K +    L + M  +G+R + + +N +
Sbjct: 67  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +V+ A  +   M  +G + +  +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP +V YN +   L +  +V  AF  F E++R G+  +   Y   ++GLC +    +A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K   ++ +YS L+D   K+G++  A ELF  + R  +  D+VTY+ +I+ LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A+ +F  M +KG   D V++NTL+ G  +       ++L   M +R
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 131/231 (56%), Gaps = 6/231 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++     +P+++TYS+LINGLC       A  +F+ M++        C  D 
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 330

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   V+   +L  +M  + +  + VTYN++I+GF  A D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ T+++++  LC NG++E+A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+ +A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +P  VT  +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++ +Y+ L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +  +  +V+TY+ ++ A   +GK+ +A +LF +M    + PD V +++L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 385 -CI--RNNETSKVVELL 398
            C+  R +E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 14/163 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F+++  FG  P++ TY+ L+ GLC  G    AL +FE+M     +       D V
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL------DIV 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G+CK G V++A  L   +  K + PD+VTY +++ G C     +E + L+ +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
             +G+  N  T S        +G +  +++L++ M+  G  P+
Sbjct: 497 KQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS 531



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 108/222 (48%)

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +A+ L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + DI +Y+ +ID LCK+ R+  A++ F  + R  +  +VVTY  +++ LC   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  DM  K + P+ + ++ L+   ++N +  +  EL   M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  281 bits (719), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-----EEVSHIIPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA +L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+     TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 229/416 (55%), Gaps = 18/416 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F ++    C PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P  +
Sbjct: 167 EALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM----EDGL--QPTQI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK+G    A  LL +M++  +I P+VV Y+++I   C     ++A+ LF E
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P++ T++ ++   C +G+  +A QLL+ M++  + P+   YN L++ F   G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+EL+  M   G   N  +YS +I+G+CK   ++ A  ++  M +KG  P ++T+NT
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM   G+ ADT  Y T I G    G +  AL+L + +    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-----------SLPRGVLIADVVTYNIMIHA 349
              DI +   L+DGLC +G+LK A E+F            S P   +  DV TYNI+I  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 178/368 (48%), Gaps = 9/368 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + +    D    L  +M+ K I  D+ +
Sbjct: 63  AIDLFSDMLRSRP------LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N +I+ FC  +    A   F ++   G+ P+VVTF+ ++  LC   ++ EA      M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +   RPN   + TLM+G C  GR+  A  L   M   G +    +Y  +++G CK  +  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 218 GALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            AL+L  +M     I P VV Y+ +   L +  +   A  LF EMQ  G+  D + Y + 
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGV 335
           I G C +G   +A +L + +   K   D+ +Y+ LI+   K G+   A EL+   LPRG+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I + +TY+ MI   C   ++D A  +F  M  KG +P+ + FNTL+ G          +
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 396 ELLHRMDE 403
           ELLH M E
Sbjct: 416 ELLHEMTE 423



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITYS++I+G C+      A ++F  M          C P+ +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  G+ P++VT   ++D LC NGK++                                  
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL  +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 99/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           + FH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 230 CKKGDTVSALNLLRKMEE 247


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 225/374 (60%), Gaps = 7/374 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+ +T  +L+NG CR      A++L ++M+    E G   KPD V 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  IID LCK   V+ A +   +++ K I P+VVTY +++ G C ++  ++A RL  +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+T+S ++D   KNGK+ EA +L E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+    VTYNTL 
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +AL +F  ++  + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 363 FLDMEAKGVAP-DC 375
           +  M+ +G+   DC
Sbjct: 493 YTKMKQEGLMKNDC 506



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 14/372 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  K+   G +P+++ Y+ +I+ LC+T     A + F+E I   G      +P+ V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKG-----IRPNVV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++GLC       A  LL  M  K I P+V+TY++++  F       EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++VT+S +++ LC + +++EA+Q+ +LM+  G   +   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI P + TYN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ ++ GLC  G L     L+  + +  L+ +  T         +DG +  + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAE 518

Query: 362 LFLDMEAKGVAP 373
           L   M + G AP
Sbjct: 519 LIKKMLSCGYAP 530



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  V +  ++  + K    D    L  +M+   I  D+ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D   Y + +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +  I EA ++F  +    C  D+ SY+ LI+G CK+ R++   +LF  + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           ++ VTYN +I      G +DKA + F  M+  G++PD   +N L+ G   N E  K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 398 LHRMDER 404
              M +R
Sbjct: 423 FEDMQKR 429



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 155/293 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+A  LF +M+     P++V F+ ++  + K  K +    L + M  +G+R + + +N +
Sbjct: 67  NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +V+ A  +   M  +G + +  +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP +V YN +   L +  +V  AF  F E++R G+  +   Y   ++GLC +    +A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   K   ++ +YS L+D   K+G++  A ELF  + R  +  D+VTY+ +++ LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A+ +F  M +KG   D V++NTL+ G  +       ++L   M +R
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 131/231 (56%), Gaps = 6/231 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++     +P+++TYS+L+NGLC       A  +F+ M++        C  D 
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG------CLADV 330

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   V+   +L  +M  + +  + VTYN++I+GF  A D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ T+++++  LC NG++E+A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 135/257 (52%), Gaps = 3/257 (1%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+ +A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +P  VT  +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++ +Y+ L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +  +  +V+TY+ ++ A   +GK+ +A +LF +M    + PD V +++L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 385 -CI--RNNETSKVVELL 398
            C+  R +E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 14/163 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F+++  FG  P++ TY+ L+ GLC  G    AL +FE+M     +       D V
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL------DIV 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G+CK G V++A  L   +  K + PD+VTY +++ G C     +E + L+ +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
             +G+  N  T S        +G +  +++L++ M+  G  P+
Sbjct: 497 KQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS 531



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 108/222 (48%)

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+  + T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +A+ L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + DI +Y+ +ID LCK+ R+  A++ F  + R  +  +VVTY  +++ LC   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  DM  K + P+ + ++ L+   ++N +  +  EL   M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  281 bits (718), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/399 (35%), Positives = 234/399 (58%), Gaps = 12/399 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+ +T  +L+NG CR      A++L ++M+    E G   +PD V 
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--RPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  IID LCK   V+ A +   ++  K I P+VVTY +++ G C +   N+A RL  +M+
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+T+S ++D   KNGK+ EA ++ E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ +M  +G+    VTYNTL 
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F++  V++A + F +M   GV+ D W Y   + GLC NG + +AL +F  ++  + +
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G   +   L
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  M+ +G+       N  ML C+ + + +   EL+ +M
Sbjct: 493 YTKMKQEGLMK-----NDSML-CLGDGDITISAELIKKM 525



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 215/399 (53%), Gaps = 23/399 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  K+   G  P+++ Y+ +I+ LC+T     AL+ F+E+    G  G+  +P+ V
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI----GRKGI--RPNVV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++GLC  G  + A  LL  M  + I P+V+TY++++  F       EAK +F EM
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++VT+S +++ LC + +++EA+Q+ +LM+  G  P+   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G  +N  +Y+ LI G+ +  +++ A   +S+M S G+ P + TYN L
Sbjct: 347 EDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +E+A  +F++MQ+  +  D   Y T I G+CK G + +A  LF +L +   
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGL 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALC-ADGKMDKA 359
           + DI +Y+ ++ GLC  G       L+  + + G++  D          LC  DG +  +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND--------SMLCLGDGDITIS 518

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +L   M + G AP        +LG I+     K + LL
Sbjct: 519 AELIKKMLSCGYAPS-------LLGDIKPVGCKKALSLL 550



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+NLF EM+     F     P  V +  ++  + K    D    L  +M+   I  D+ T
Sbjct: 69  AINLFREMVKTR-PF-----PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +N VI  FC     + A  +  +M+  G +P+ VT   +++  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG RP+   YN ++D  C T RVN A + F  +   G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I P V+TY+ L     +  +V  A ++F+EM R  +  D   Y + I
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +  I EA ++F  +    C  D+ SY+ LI+G CK+ R++   +LF  + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + VTYN +I      G +DKA + F  M++ GV+PD   +N L+ G   N    K + +
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422

Query: 398 LHRMDE 403
              M +
Sbjct: 423 FEDMQK 428



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 157/293 (53%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+ ++  + K  K +    L + M  +G+R + + +N +
Sbjct: 67  HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +V+ A  +   M  +G + +  +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P +V YN +   L +  +V  A   F E+ R G+  +   Y   ++GLC +G   +A  
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R +   K   ++ +YS L+D   K+G++  A E+F  + R  +  D+VTY+ +I+ LC
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A+ +F  M +KG  PD V++NTL+ G  +       ++L  +M +R
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR 359



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F ++     +P+++TYS+LINGLC       A  +F+ M++        C PD 
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CFPDV 330

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   V+   +L  +M  + +  + VTYN++I+GF    D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P++ T+++++  LC NG +E+A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C         +LY++M  +G+
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 107/222 (48%)

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +++ A  LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+  + T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +A+ L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               DI +Y+ +ID LCK+ R+  A + F  + R  +  +VVTY  +++ LC  G+ + A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  DM  + + P+ + ++ L+   ++N +  +  E+   M
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 91/193 (47%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           ++ ++  A++L+ EM+     P++V +N L   + ++ + +    L  +M+  G+  D +
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +   I+  C    +  AL +   +  L  E D  +   L++G C+  R+  A  L   +
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                  D+V YN +I +LC   +++ A D F ++  KG+ P+ V +  L+ G   +   
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 392 SKVVELLHRMDER 404
           +    LL  M +R
Sbjct: 242 NDAARLLRDMIKR 254


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  280 bits (716), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 232/396 (58%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + A G + + + Y TLI+GLC+ G T  AL+L    ++GN     + +P+ V
Sbjct: 145 QALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRR-VDGN-----LVQPNVV 198

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIIDG+CK+  V+ A +L  +M  K I+P+VVTY+++I GF       +A  LF +M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+V TF++++D  CK+GKM+E   +  +M++ G++PN   Y +LMDG+CL   V
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +  +M   G   ++ SY+ILI+G+CK K+++ A++L+ EM  K I P VVTYN+L
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ L   L+    
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LIDGLCK GRL+ A  +F  L        V TY +MIH  C  G  D+A  
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALA 498

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L   M+     PD V +  ++      +E  K  +L
Sbjct: 499 LLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 180/335 (53%), Gaps = 6/335 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++ + G  PNV+TYS LI+G    G    A++LF +MI  N       KPD  
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN------IKPDVY 268

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++DG CK+G + + K +   M  + I P+VVTY S++ G+C   + N+AK +   M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P++ ++++++D  CK  K++EA  L + M    + P+   YN+L+DG C  G++
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   ++ +YS +++  CKN +++ A++L +++  +GI+P + TY  L
Sbjct: 389 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 448

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  +F+++   G       Y   I G C  G   EAL L   ++   C
Sbjct: 449 IDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC 508

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
             D  +Y  +I  L        A +L   + RG+L
Sbjct: 509 IPDAVTYEIIIRSLFDKDENDKAEKLREMITRGLL 543



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 196/422 (46%), Gaps = 60/422 (14%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N I YS++          + A +LF  ++  N        P A+ +  I+  L K     
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPT------PPAIEFNKILGSLVKSKHYH 93

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
               L  QM+ + INP       V+  F + +          ++M  G  PN +TF+ ++
Sbjct: 94  TVLSLSQQMEFEGINP-------VLFHFQHPH----------QLM--GYHPNTITFTTLI 134

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC  G++ +A    + ++ +G + +   Y TL+ G C  G    A +L   ++    +
Sbjct: 135 KGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQ 194

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV  YS +I+G CK+K +  A  LYSEM+SKGI P VVTY+ L  G F + Q++ A  L
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR--------ILKCEL------ 303
           F++M    +  D + +   +DG CK+G + E   +F  +         +  C L      
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 304 ---------------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
                                DI+SY+ LIDG CK  ++  A  LF  +    +I DVVT
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN +I  LC  GK+  A  L  +M  +GV PD + +++++    +N++  K + LL ++ 
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434

Query: 403 ER 404
           ++
Sbjct: 435 DQ 436


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 143/373 (38%), Positives = 220/373 (58%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M     E  VV      
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV------ 261

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+ID LCK    D A  L  +M++K + P+V+TY+S+I   C     ++A RL  +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVVTF+ ++D   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S  C  NV +Y+ LING+CK K I+  + L+ EM  +G+    VTY TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    + A  +F +M   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  I +Y+ +I+G+CK+G+++  W+LF SL    +  DV+ YN MI   C  G  ++A  
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561

Query: 362 LFLDMEAKGVAPD 374
           LF  M   G  PD
Sbjct: 562 LFRKMREDGPLPD 574



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 221/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G  P+ IT++TLI+GL        A+ L + M+         C+P+ V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G +D A  LL +M+   I  +VV Y++VI   C     ++A  LF EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PNV+T+S ++  LC   +  +AS+LL  MI+  + PN   +N L+D F   G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P VVTYNTL
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++   +LF EM + G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   D
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV PD + +NT++ G  R     +   L  +M E
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 205/399 (51%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  K++  G   N+ TY+ LIN  CR     +AL L  +M+    E      P  V  +
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYE------PSIVTLS 159

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    +  A  L+ QM +    PD +T+ ++I G    N ++EA  L   M+ +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN+VT+ V+++ LCK G ++ A  LL  M    +  N  +Y+T++D  C     + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  ME+ G + NV +YS LI+  C  +    A  L S+M+ + I P VVT+N L   
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A KL+DEM +  +  D + Y + I+G C +  + EA  +F  +    C  +
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI+G CK+ R+    ELF  + +  L+ + VTY  +IH        D A  +F 
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
            M + GV P+ + +NTL+ G  +N +  K   V E L R
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 181/359 (50%), Gaps = 4/359 (1%)

Query: 50  GEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
           G FG + K    P    +  ++  + K    D    L  +M+   I+ ++ TYN +I  F
Sbjct: 71  GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C  +  + A  L  +MM  G +P++VT S +++  C   ++ +A  L++ M+++G RP+ 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G  L  + + A  L   M   GC+ N+ +Y +++NG CK  +I+ A +L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M +  I+  VV Y+T+   L +    + A  LF EM+  GV  +   Y + I  LC    
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             +A  L   +   K   ++ +++ LID   K G+L  A +L+  + +  +  D+ TY+ 
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I+  C   ++D+A  +F  M +K   P+ V +NTL+ G  +     + VEL   M +R
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 144/269 (53%), Gaps = 6/269 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L + +      PNV+T++ LI+   + G  + A  L++EMI  +        PD  
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIF 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+G C    +D+AK +   M  K+  P+VVTYN++I GFC A   +E   LF EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N VT++ ++    +    + A  + + M+  GV PN   YNTL+DG C  G++
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  ++    +  +++Y+I+I G CK  ++E    L+  +  KG+KP V+ YNT+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             G       E A  LF +M+  G   D+
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDS 575



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 135/233 (57%), Gaps = 6/233 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++     +P++ TYS+LING C       A ++FE MI+ +      C P+ 
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 400

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   +D+  EL  +M  + +  + VTY ++I GF  A D + A+ +F +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T++ ++D LCKNGK+E+A  + E + +  + P  + YN +++G C  G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           V    +LF S+   G K +V  Y+ +I+G+C+    E A +L+ +M   G  P
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 151/308 (49%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   ++   ++A  LF  M+     P++  F+ ++  + K  K +    L E M 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+  N + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +P  +T+ TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLCK G I  A  L   +   K E ++  YS +ID LCK      A  LF  +    + 
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +V+TY+ +I  LC   +   A  L  DM  + + P+ V FN L+   ++  +  +  +L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 398 LHRMDERN 405
              M +R+
Sbjct: 353 YDEMIKRS 360


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/415 (34%), Positives = 235/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +P  ITY T+++G+C+ G T+ AL+L  +M     E   +  P+ 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM----EEISHII-PNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M++K I PD+ TYNS+I GFC +   ++A++L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVT++ +++   K GK  EA +L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+     TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L           D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  R
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610



 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 230/416 (55%), Gaps = 18/416 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P  +
Sbjct: 167 EALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM----EDGL--QPTQI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK G    A +LL +M++  +I P+VV Y+++I   C     ++A+ LF E
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P++ T++ ++   C +G+  +A QLL+ M++  + P+   YN L++ F   G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+EL+  M   G   N  +YS +I+G+CK   ++ A  ++  M +KG  P ++T+NT
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++   +L  EM   G+ ADT  Y T I G    G +  AL+L + +    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-----------SLPRGVLIADVVTYNIMIHA 349
              DI +   L+DGLC +G+LK A E+F            S P   +  DV TYNI+I  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 42/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+ +      P+V+ +  L+  + R     + ++L+++M        + C  D  
Sbjct: 62  DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIY 115

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I   C    +  A     ++    ++PDVVT+N+++ G C  +  +EA  LF +M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
            +   +PNVVTF+ +M+ LC+ G++ EA  LL+ M++ G++P    Y T++DG       
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235

Query: 175 -----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                         C  GR + A+ LF  M+  G   ++F+Y+ 
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I G+C +     A  L  EML + I P VVTYN L     +  +   A +L+DEM   G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +T  Y + IDG CK   +  A  +F  +    C  ++ +++ LIDG C + R+    
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL H +    L+AD  TYN +IH     G ++ A DL  +M + G+ PD V  +TL+ G 
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475

Query: 386 IRNNETSKVVELLHRMDE 403
             N +    +E+   M +
Sbjct: 476 CDNGKLKDALEMFKVMQK 493



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN ITYS++I+G C+      A ++F  M          C P+ +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C    +D   ELL +M +  +  D  TYN++I GF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------------------------------- 147
           +  G+ P++VT   ++D LC NGK++                                  
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
                       EA +L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI    +TY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  A+ +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 1/302 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+VV F  +M  + +  + +    L + M +  +R 
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     +P VVT+ TL  GL    ++  A  L D M   G+      Y T +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 284 GYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL+L R +  I     ++  YS +ID LCK GR   A  LF  +    +  D+ T
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI   C+ G+   A  L  +M  + ++PD V +N L+   ++  +  +  EL   M 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 403 ER 404
            R
Sbjct: 353 PR 354



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 100/198 (50%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+S+ML     P+VV +  L   +  + + +    L+ +M+R  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  AL  F  +  L    D+ +++ L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LFH +       +VVT+  +++ LC +G++ +A  L   M   G+ P  + + T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   ++LL +M+E
Sbjct: 230 CKIGDTVSALDLLRKMEE 247


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 16/415 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E      P+ 
Sbjct: 199 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSHIIPNV 253

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY TIIDGL K+G    A  L ++M++K I PD+VTYN +I GFC +   ++A++L  E
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVTFS +++   K GK  EA +L + M+   + P+   Y++++DGFC   R
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ +F    + GC  ++ +++ LI GYC+ K ++  + L  EM   G+    +TY T
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +ALE+F+ ++  K
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 -----------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                       E D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC   ++D+A  +F  M +K  +PD V FNTL+ G  +       +EL   M +R
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQR 608



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 233/416 (56%), Gaps = 22/416 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C+PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P+ +
Sbjct: 169 EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML----EDGL--QPNQI 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y TI+DG+CK G    A  LL +M++  +I P+VV YN++I G       ++A  LFIE
Sbjct: 219 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIE 278

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + P++VT++ +++  C +G+  +A QLL+ M++  + P+   ++ L++ F   G+
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGK 338

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+EL+  M       +  +YS +I+G+CK   ++ A  ++    +KG  P ++T+NT
Sbjct: 339 FFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNT 398

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +V+   KL  EM   G+ A+T  Y T I G C+ G +  A +L + +    
Sbjct: 399 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG 458

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----------PRGVLIADVVTYNIMIHA 349
              ++ + + L+DGLC +G+LK A E+F ++           P   +  DV TYNI+I  
Sbjct: 459 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICG 518

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +GK  +A +L+ +M  +G+ PD + +++++ G  + +   +  ++   M  ++
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 574



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 199/423 (47%), Gaps = 46/423 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+VI +  L+  + R G   V ++L ++M        + C  +A  +T ++   C    +
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKM----EMLRMPC--NAYSFTILMKCFCSCSKL 132

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A     ++     +P VVT+N+++ G C  +  +EA  LF +M     +PNVVTF+ +
Sbjct: 133 PFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTL 188

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC-------------------- 176
           M+ LC+ G++ EA  LL+ M++ G++PN   Y T++DG C                    
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248

Query: 177 ----------------LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                             GR + A  LF+ M+      ++ +Y+ +ING+C +     A 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I P VVT++ L     +  +   A +L+DEM    +   T  Y + IDG 
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   +  A  +F       C  DI +++ LI G C++ R+    +L H +    L+A+ 
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           +TY  +IH  C  G ++ A DL  +M + GV P+ V  NTL+ G   N +    +E+   
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 401 MDE 403
           M +
Sbjct: 489 MQK 491



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 17/307 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F      GC P++IT++TLI G CR       + L  EM     E G+V   + + 
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLVA--NTIT 430

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM- 121
           YTT+I G C+ G ++ A++LL +M    + P+VVT N+++ G C      +A  +F  M 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 122 ---MD-------QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
              MD        GV+P+V T+++++  L   GK  EA +L E M   G+ P+   Y+++
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C   R++ A ++F SM S     +V +++ LI GYCK   ++  L L+ EM  +GI
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
               +TY TL  G  ++  ++ A  +F EM   GV  DT   R  + GL     +  A+ 
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVA 670

Query: 292 LFRTLRI 298
           +   L++
Sbjct: 671 MLEDLQM 677



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF      ++A  LF  M+     P+V+ F  +M  + + G+ +    L + M  + +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           NA+ +  LM  FC   ++  A   F  +  +G    V +++ L++G C    I  AL L+
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     KP VVT+ TL  GL    +V  A  L D M   G+  +   Y T +DG+CK 
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 284 GYIVEALELFRTLR-ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G  V AL L R +  +     ++  Y+ +IDGL K GR   A  LF  +    +  D+VT
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN MI+  C  G+   A  L  +M  + + PD V F+ L+   ++  +  +  EL   M 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 403 ERN 405
            R+
Sbjct: 351 PRS 353



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 97/198 (48%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K ++ A+ L+  M+     P+V+ +  L   +  + + +    L  +M+   
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  + +++   +   C    +  AL  F  +  L     + +++ L+ GLC   R+  A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LFH + +     +VVT+  +++ LC +G++ +A  L   M   G+ P+ + + T++ G 
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 228 CKMGDTVSALNLLRKMEE 245


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 10/401 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAAAL  K+   G   +V+TY T++NG+C+ G T  ALNL  +M   +       KPD 
Sbjct: 27  LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 80

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M +K I P+V TYN +I GFC     ++A+RL  +
Sbjct: 81  VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 140

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V+TF+ ++    K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 141 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 200

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+     TYNT
Sbjct: 201 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EALELF  +++ K
Sbjct: 257 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +Y+ +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A+
Sbjct: 317 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 376

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M+  G  PD   +NTL+ GC++  E  K +EL+  M
Sbjct: 377 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 417



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 206/390 (52%), Gaps = 10/390 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P VIT++TLINGLC  G  + A  L  +M+ G G        D V Y TI++G+CK 
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHIDVVTYGTIVNGMCKM 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A  LL +M++ +I PDVV Y+++I   C     ++A+ LF EM+++G+ PNV T+
Sbjct: 59  GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 118

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C  G+  +A +LL  MI+  + P+   +N L+      G++  A++L   M  
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                +  +Y+ +I G+CK+   + A  ++  M S    P VVT+NT+        +V+ 
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 234

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             +L  E+ R G+ A+T  Y T I G C+   +  A +LF+ +       D  + + L+ 
Sbjct: 235 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 294

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C++ +L+ A ELF  +    +  D V YNI+IH +C   K+D+A DLF  +   GV P
Sbjct: 295 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 354

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D   +N ++ G    +  S    L H+M +
Sbjct: 355 DVQTYNVMISGFCGKSAISDANVLFHKMKD 384



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 14/365 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+++   G  PNV TY+ +I+G C  G    A  L  +MI           PD +
Sbjct: 98  DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I    KEG + +A++L  +M  + I PD VTYNS+I GFC  N  ++AK +F   
Sbjct: 152 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 208

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VVTF+ I+D  C+  +++E  QLL  + + G+  N   YNTL+ GFC    +
Sbjct: 209 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I    V YN +
Sbjct: 268 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++    
Sbjct: 328 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 388 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 444

Query: 362 LFLDM 366
            F DM
Sbjct: 445 -FSDM 448



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 162/313 (51%), Gaps = 4/313 (1%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M +  + P V+T+N++I G C      EA  L  +M+ +G+  +VVT+  I++ +CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            + A  LL  M +  ++P+  +Y+ ++D  C  G  + A+ LF  M   G   NVF+Y+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G+C       A  L  +M+ + I P V+T+N L     +  ++  A KL DEM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  DT  Y + I G CK+    +A  +F     L    D+ +++ +ID  C++ R+    
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   + R  L+A+  TYN +IH  C    ++ A DLF +M + GV PD +  N L+ G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 386 IRNNETSKVVELL 398
             N +  + +EL 
Sbjct: 297 CENEKLEEALELF 309



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 124/249 (49%), Gaps = 4/249 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++IG+ P    +NTL++G CL GRV  A  L   M   G   +V +Y  ++NG CK  +
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + AL+L S+M    IKP VV Y+ +   L +      A  LF EM   G+A + + Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDG C  G   +A  L R +   +   D+ +++ LI    K G+L  A +L   +    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D VTYN MI+  C   + D A  +F D+ A   +PD V FNT++    R     + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 396 ELLHRMDER 404
           +LL  +  R
Sbjct: 237 QLLREISRR 245


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 10/401 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAAAL  K+   G   +V+TY T++NG+C+ G T  ALNL  +M   +       KPD 
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M +K I P+V TYN +I GFC     ++A+RL  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V+TF+ ++    K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+     TYNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EALELF  +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +Y+ +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M+  G  PD   +NTL+ GC++  E  K +EL+  M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 214/403 (53%), Gaps = 10/403 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA ALF ++   G  P VIT++TLINGLC  G  + A  L  +M+ G G        D 
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHIDV 261

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y TI++G+CK G    A  LL +M++ +I PDVV Y+++I   C     ++A+ LF E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PNV T++ ++D  C  G+  +A +LL  MI+  + P+   +N L+      G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++L   M       +  +Y+ +I G+CK+   + A  ++  M S    P VVT+NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +        +V+   +L  E+ R G+ A+T  Y T I G C+   +  A +LF+ +    
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  + + L+ G C++ +L+ A ELF  +    +  D V YNI+IH +C   K+D+A 
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DLF  +   GV PD   +N ++ G    +  S    L H+M +
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 14/365 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+++   G  PNV TY+ +I+G C  G    A  L  +MI           PD +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I    KEG + +A++L  +M  + I PD VTYNS+I GFC  N  ++AK +F   
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VVTF+ I+D  C+  +++E  QLL  + + G+  N   YNTL+ GFC    +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I    V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++    
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 660

Query: 362 LFLDM 366
            F DM
Sbjct: 661 -FSDM 664



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 19/343 (5%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  L  +M+ + I  ++ ++N +I+ FC  +  + +   F ++   G QP+VVTF+ +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MDELCKNGKME---------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  LC   ++                EA  L + M++IG+ P    +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKP VV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +++ LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A  
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F D+ A   +PD V FNT++    R     + ++LL  +  R
Sbjct: 423 MF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 24/309 (7%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V  N VI  F   N  + A  L+ +M  + +  N+ +F++++   C   K+  +      
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           + ++G +P+   +NTL+ G CL  R++ A  LF                    GY     
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYMVETG 206

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              A++L+ +M+  G+ P V+T+NTL  GL    +V  A  L ++M   G+  D   Y T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++G+CK G    AL L   +     + D+  YS +ID LCK G    A  LF  +    
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETS 392
           +  +V TYN MI   C+ G+   A  L  DM  + + PD + FN L+   ++     E  
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 393 KVV-ELLHR 400
           K+  E+LHR
Sbjct: 387 KLCDEMLHR 395



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 15/274 (5%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A    + M++      A   N ++  F    R + A  L+  ME      N++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------- 258
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  A  LF       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 259 --------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
                   D+M   G+      + T I+GLC  G ++EA  L   +      +D+ +Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +++G+CK G  K A  L   +    +  DVV Y+ +I  LC DG    A  LF +M  KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +AP+   +N ++ G       S    LL  M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 10/401 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAAAL  K+   G   +V+TY T++NG+C+ G T  ALNL  +M   +       KPD 
Sbjct: 238 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 291

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M +K I P+V TYN +I GFC     ++A+RL  +
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V+TF+ ++    K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+     TYNT
Sbjct: 412 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EALELF  +++ K
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +Y+ +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A+
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M+  G  PD   +NTL+ GC++  E  K +EL+  M
Sbjct: 588 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 628



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 219/436 (50%), Gaps = 35/436 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK----P 58
           + + F KL   G +P+V+T++TL++GLC       AL LF  M+     F  + +    P
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             + + T+I+GLC EG V +A  L+ +M  K ++ DVVTY +++ G C   D+  A  L 
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M +  ++P+VV +S I+D LCK+G   +A  L   M++ G+ PN F YN ++DGFC  
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR + A+ L   M       +V +++ LI+   K  ++  A  L  EML + I P  VTY
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399

Query: 239 NTLFIGLFEIHQVERAFKLFD-------------------------------EMQRHGVA 267
           N++  G  + ++ + A  +FD                               E+ R G+ 
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           A+T  Y T I G C+   +  A +LF+ +       D  + + L+ G C++ +L+ A EL
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 519

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +    +  D V YNI+IH +C   K+D+A DLF  +   GV PD   +N ++ G   
Sbjct: 520 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 579

Query: 388 NNETSKVVELLHRMDE 403
            +  S    L H+M +
Sbjct: 580 KSAISDANVLFHKMKD 595



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 188/365 (51%), Gaps = 14/365 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+++   G  PNV TY+ +I+G C  G    A  L  +MI           PD +
Sbjct: 309 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I    KEG + +A++L  +M  + I PD VTYNS+I GFC  N  ++AK +F   
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 419

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VVTF+ I+D  C+  +++E  QLL  + + G+  N   YNTL+ GFC    +
Sbjct: 420 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I    V YN +
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++    
Sbjct: 539 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 599 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 655

Query: 362 LFLDM 366
            F DM
Sbjct: 656 -FSDM 659



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 14/338 (4%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  L  +M+ + I  ++ ++N +I+ FC  +  + +   F ++   G QP+VVTF+ +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MDELCKN----------GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +  LC            G M E   L + M++IG+ P    +NTL++G CL GRV  A  
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 242

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKP VV Y+ +   L 
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   +   D+ 
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +++ LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A  +F D+
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DL 421

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A   +PD V FNT++    R     + ++LL  +  R
Sbjct: 422 MA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 151/304 (49%), Gaps = 10/304 (3%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V  N VI  F   N  + A  L+ +M  + +  N+ +F++++   C   K+  +      
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRA----------KELFVSMESMGCKHNVFSYSI 205
           + ++G +P+   +NTL+ G CL  R++ A            LF  M  +G    V +++ 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING C    +  A +L ++M+ KG+   VVTY T+  G+ ++   + A  L  +M+   
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D   Y   ID LCK+G+  +A  LF  +       ++ +Y+C+IDG C  GR   A 
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   +    +  DV+T+N +I A   +GK+ +A  L  +M  + + PD V +N+++ G 
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 386 IRNN 389
            ++N
Sbjct: 407 CKHN 410



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 10/269 (3%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A    + M++      A   N ++  F    R + A  L+  ME      N++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF---------- 255
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LFD+M   G+      + T I+GLC  G ++EA  L   +      +D+ +Y  +++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G  K A  L   +    +  DVV Y+ +I  LC DG    A  LF +M  KG+AP+ 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +N ++ G       S    LL  M ER
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIER 355


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 153/400 (38%), Positives = 231/400 (57%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+     +L + G + + ++Y TLINGLC+ G T  AL L  ++       G +C+PD V
Sbjct: 137 ESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI------EGEICRPDVV 190

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIIDGLCK+  V  A +L  +M +K + P+VVTY S+I GFC     ++A  L  EM
Sbjct: 191 MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNV TF+ ++D LCK GKM EA  L+ +M++ GV P+ F YN LMDG+ L    
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AK +F  M  MG   +V SYS++I+G  K K ++ A+ L+  M ++ + P VV Y++L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A K  DEM   G   +   Y + ID LCK+  + +A+ L + ++    
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y+ L+DGLCK GRL  A ++F  L       DVVTY+IMI+ LC +   D+A  
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALT 490

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   ME KG  PD +A+ T++      +   K  +LL  M
Sbjct: 491 LLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 179/347 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+  L K         L  +M+   I  + +T N +I  +C+    N A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++  G QP+++T++ ++  LC NG+++E+    + ++  G++ +   Y TL++G C 
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+   A  L   +E   C+ +V  Y+ +I+G CK+K +  A  LY EM  K + P VVT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y +L  G   + Q+++AF L +EM    V  +   + T +DGLCK G + EA  L   + 
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+ +Y+ L+DG         A  +F+ + +  +  DV +Y++MI  L     +D
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A DLF  M  + V PD VA+++L+ G  ++   +  ++ +  M +R
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDR 393



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+A   F  M+     P ++ F  I+  L K         L + M   G++ N    N L
Sbjct: 31  NDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNIL 90

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ +C   ++N A  +F  +  +G + ++ +Y+ LI G C N +++ +L+ +  ++S+GI
Sbjct: 91  INSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGI 150

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K   V+Y TL  GL +I Q   A +L  +++      D   Y T IDGLCK+  + +A +
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +   +   ++ +Y+ LI G C  G+L  A+ L + +    +  +V T+N ++  LC
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +GKM +A  L   M  +GV PD   +N LM G     E  K   + + M +
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 128/256 (50%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           + +A      M+++   P    +  ++     T        LF  ME  G + N  + +I
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN YC  ++I  A S+++++L  G +P ++TY TL  GL    QV+ +    D +   G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D  +Y T I+GLCK G    AL L R +    C  D+  Y+ +IDGLCK   ++ A+
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L+  +    +  +VVTY  +I+  C  G++DKA  L  +M  K V P+   FNTL+ G 
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 386 IRNNETSKVVELLHRM 401
            +  +  +   L+  M
Sbjct: 270 CKEGKMREAKSLVAVM 285



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 125/226 (55%), Gaps = 6/226 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G   +V +YS +I+GL +      A++LFE M N N        PD V
Sbjct: 312 KAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN------VIPDVV 365

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G ++ A + + +M D+   P+V+TY S+I   C ++  ++A  L  ++
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG+Q N+ T+++++D LCK+G++ +A ++ + ++  G   +   Y+ +++G C     
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A  L   ME  GC  +  +Y  +IN + +    + A  L  EM+
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 102/225 (45%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A + F  M  M     +  +  ++    K K     + L+  M   GI+   +T N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L      + Q+  AF +F ++ + G   D   Y T I GLC NG + E+L     L    
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  SY  LI+GLCK G+   A  L   +   +   DVV YN +I  LC D  +  A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL+ +M  K V P+ V + +L+ G     +  K   LL+ M  +N
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN 254



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 6/122 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  K+K  G + N+ TY+ L++GLC+ G    A  +F++++            D V
Sbjct: 417 KAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNV------DVV 470

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLCKE   D+A  LL +M+DK   PD + Y ++I  F   + +++A++L  EM
Sbjct: 471 TYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530

Query: 122 MD 123
           +D
Sbjct: 531 ID 532


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  278 bits (711), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 150/403 (37%), Positives = 229/403 (56%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G + + ++Y TLINGLCR G T  A+ L   +       G + +P+ V
Sbjct: 146 KALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD------GKLVRPNVV 199

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID +CK+  V+ A +L  +M  K I+PDVVTY+S+I GFC       A  LF  M
Sbjct: 200 MYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRM 259

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PNV TFS+++D  CK GK+ EA  +L +M++  V+ +   YN+LMDG+CL  +V
Sbjct: 260 ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQV 319

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK LF  M   G   +V+SYSI+ING+CK K ++ A+ L+ EM  K I P VVTYN+L
Sbjct: 320 NKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSL 379

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A +L DEM   G  ++   Y + +D +CKN ++ +A+ L   ++    
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ LI+GLCK GRL  A ++F  L       ++ TY  +I+  C  G  D+   
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   M+  G  P+ + +  L+      +E  K  +LL  M  R
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 197/370 (53%), Gaps = 41/370 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++ +    P+V+TYS+LI+G C  G    A++LF  MI+ N        P+  
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN------INPNVY 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +IDG CKEG V +AK +L  M  KN+  DVVTYNS++ G+C     N+AK LF  M
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+V ++S++++  CK   ++EA +L E M    + PN   YN+L+DG C +GR 
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   G   N+ +Y+ +++  CKN  ++ A+ L +++  KGI+P + TY  L
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ +++ A K+F+++   G + + + Y + I+G C  G+  E L +   ++    
Sbjct: 450 INGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK---- 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                      D  C                    I + +TY I+IH+L    + DKA  
Sbjct: 506 -----------DNGC--------------------IPNAITYEILIHSLFEKDENDKAEK 534

Query: 362 LFLDMEAKGV 371
           L  +M A+G+
Sbjct: 535 LLREMIARGL 544



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 187/364 (51%), Gaps = 5/364 (1%)

Query: 41  LFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS 100
           LF  +++ N        P A+ +  I+  L K      A  L  QM+   I PD +T N 
Sbjct: 44  LFNRLLHKNNPI-----PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNL 98

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           ++  F        +  +F +++ +G  P+ VTF++++  LC  G++ +A    + ++  G
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            + +   Y TL++G C  G    A +L   ++    + NV  YS +I+  CK+K +  A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            LY EM+SK I P VVTY++L  G   + +++ A  LF+ M    +  + + +   IDG 
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G + EA  +   +     +LD+ +Y+ L+DG C   ++  A  LF+ + +  +  DV
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +Y+IMI+  C    +D+A  LF +M  K + P+ V +N+L+ G  ++  TS  +EL+  
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398

Query: 401 MDER 404
           M +R
Sbjct: 399 MHDR 402



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 197/388 (50%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P  I +  ++  L +      AL+L ++M     EF  + KPD +    +++   + G +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQM-----EFNGI-KPDFITCNLLMNCFSQLGHI 109

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             +  +  ++  K  +PD VT+  +I+G C   + ++A     +++ QG Q + V++  +
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LC+ G+ + A QLL  +    VRPN  +Y+T++D  C    VN A +L+  M S   
Sbjct: 170 INGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRI 229

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +YS LI+G+C   +++ A+ L++ M+S  I P V T++ L  G  +  +V  A  
Sbjct: 230 SPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKN 289

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +   M +  V  D   Y + +DG C    + +A  LF  +       D+ SYS +I+G C
Sbjct: 290 VLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFC 349

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K   +  A +LF  +    +  +VVTYN ++  LC  G+   A +L  +M  +G   + +
Sbjct: 350 KIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNII 409

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N+++    +NN   K + LL ++ E+
Sbjct: 410 TYNSILDAICKNNHVDKAIVLLTKIKEK 437



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 118/243 (48%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P A  +  ++       +   A  L   ME  G K +  + ++L+N + +   I+ + S+
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           ++++L KG  P  VT+  L  GL    +V +A    D++   G   D  +Y T I+GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
            G    A++L R +       ++  YS +ID +CK   +  A++L+  +    +  DVVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           Y+ +I   C  GK+  A DLF  M +  + P+   F+ L+ G  +  +  +   +L  M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 403 ERN 405
           ++N
Sbjct: 296 KKN 298


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  278 bits (710), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 149/401 (37%), Positives = 230/401 (57%), Gaps = 10/401 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAAAL  K+   G   +V+TY T++NG+C+ G T  ALNL  +M   +       KPD 
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IID LCK+G    A+ L  +M +K I P+V TYN +I GFC     ++A+RL  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V+TF+ ++    K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+     TYNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EALELF  +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +Y+ +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A+
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M+  G  PD   +NTL+ GC++  E  K +EL+  M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 214/403 (53%), Gaps = 10/403 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA ALF ++   G  P VIT++TLINGLC  G  + A  L  +M+ G G        D 
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKG-----LHIDV 261

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y TI++G+CK G    A  LL +M++ +I PDVV Y+++I   C     ++A+ LF E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PNV T++ ++D  C  G+  +A +LL  MI+  + P+   +N L+      G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++L   M       +  +Y+ +I G+CK+   + A  ++  M S    P VVT+NT
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +        +V+   +L  E+ R G+ A+T  Y T I G C+   +  A +LF+ +    
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  + + L+ G C++ +L+ A ELF  +    +  D V YNI+IH +C   K+D+A 
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DLF  +   GV PD   +N ++ G    +  S    L H+M +
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 10/350 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+++   G  PNV TY+ +I+G C  G    A  L  +MI           PD +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I    KEG + +A++L  +M  + I PD VTYNS+I GFC  N  ++AK +F   
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VVTF+ I+D  C+  +++E  QLL  + + G+  N   YNTL+ GFC    +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I    V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++    
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           E D  +Y+ LI G  K+G +  + EL   +       D  T  +    +C
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 19/343 (5%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  L  +M+ + I  ++ ++N +I+ FC  +  + +   F ++   G QP+VVTF+ +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MDELCKNGKME---------------EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  LC   ++                EA  L + M++IG+ P    +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKP VV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +++ LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A  
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F D+ A   +PD V FNT++    R     + ++LL  +  R
Sbjct: 423 MF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 149/266 (56%), Gaps = 10/266 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +TY+++I G C+      A ++F+ M +          PD V + TIID  C+   V
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRV 448

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+  +LL ++  + +  +  TYN++I GFC  ++ N A+ LF EM+  GV P+ +T +++
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C+N K+EEA +L E++    +  +   YN ++ G C   +V+ A +LF S+   G 
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + +V +Y+++I+G+C    I  A  L+ +M   G +P   TYNTL  G  +  +++++ +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCK 282
           L  EM+ +G + D +  +   + +C+
Sbjct: 629 LISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 142/306 (46%), Gaps = 24/306 (7%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N VI  F   N  + A  L+ +M  + +  N+ +F++++   C   K+  +      + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G +P+   +NTL+ G CL  R++ A  LF                    GY        
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALF--------------------GYMVETGFLE 209

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A++L+ +M+  G+ P V+T+NTL  GL    +V  A  L ++M   G+  D   Y T ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G+CK G    AL L   +     + D+  YS +ID LCK G    A  LF  +    +  
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVV 395
           +V TYN MI   C+ G+   A  L  DM  + + PD + FN L+   ++     E  K+ 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 396 -ELLHR 400
            E+LHR
Sbjct: 390 DEMLHR 395



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 15/274 (5%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A    + M++      A   N ++  F    R + A  L+  ME      N++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------- 258
           LI  +C   ++  +LS + ++   G +P VVT+NTL  GL    ++  A  LF       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 259 --------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
                   D+M   G+      + T I+GLC  G ++EA  L   +      +D+ +Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +++G+CK G  K A  L   +    +  DVV Y+ +I  LC DG    A  LF +M  KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +AP+   +N ++ G       S    LL  M ER
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  277 bits (708), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/403 (37%), Positives = 227/403 (56%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ A G   + I+Y  LING+C+ G T  A+ L   +   +       +P+ V
Sbjct: 146 EALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWS------IRPNVV 199

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+ IID LCK+  VD+A +L  +M  K I+PDVVTY+ ++ GFC     N A  L  EM
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P++ T+++++D LCK GK++EA  +L +M++  V  +  VY+TLMDG+CL   V
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK +F +M  MG   +V  YSI+ING CK K ++ AL+L+ E+  K + P  VTY +L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++   + LFDEM   G   D   Y   ID LCKNG++  A+ LF  ++    
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +++ L+DGLCK GRLK A E F  L       +V TY +MI+ LC +G +D+A  
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G   D V F  ++      +E  K  +L+  M  R
Sbjct: 500 LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +++ +   PNV+ YS +I+ LC+      A +L+ EM+ G G       PD V 
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV-GKG-----ISPDVVT 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++ G C  G +++A +LL +M  +NINPD+ TY  ++   C      EA+ +   M+
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V  +VV +S +MD  C   ++  A ++   M Q+GV P+   Y+ +++G C   RV+
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  +       +  +Y+ LI+  CK+  I     L+ EML +G  P V+TYN L 
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   ++RA  LF++M+   +  + + +   +DGLCK G +  ALE F+ L      
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L++R+Y+ +I+GLCK G L  A  L   +     I+D VT+ IMI A     + DKA  L
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKL 535

Query: 363 FLDMEAKGV 371
             +M A+G+
Sbjct: 536 VREMIARGL 544



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 188/389 (48%), Gaps = 2/389 (0%)

Query: 18  NVITYSTLINGLCRTGHTIVAL--NLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           ++  +   +  LC   H++  L  N  + +   N  F V   P    +  I+  L     
Sbjct: 14  SIPNFPPFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKR 73

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
              A  L  QM+   + PD  T N +I  FC+      A     +++  G QPN +T + 
Sbjct: 74  YPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNT 133

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +M  LC  GK++EA +  + ++  G R +   Y  L++G C  G    A  L   +E   
Sbjct: 134 LMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWS 193

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV  YS++I+  CK+  ++ A  LY+EM+ KGI P VVTY+ L  G   + Q+ RA 
Sbjct: 194 IRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAI 253

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L +EM    +  D + Y   +D LCK G + EA  +   +      LD+  YS L+DG 
Sbjct: 254 DLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGY 313

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C    +  A  +F+++ +  +  DV  Y+IMI+ LC   ++D+A +LF ++  K + PD 
Sbjct: 314 CLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDT 373

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V + +L+    ++   S V +L   M +R
Sbjct: 374 VTYTSLIDCLCKSGRISYVWDLFDEMLDR 402



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 200/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F  +      P+   ++ ++  L        A++L+++M     E   V +PD  
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQM-----ELSEV-EPDYF 94

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               II+  C  G V  A   + ++      P+ +T N++++G C      EA R   ++
Sbjct: 95  TLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV 154

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG + + +++ ++++ +CK G+   A +LL  + +  +RPN  +Y+ ++D  C    V
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLV 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L+  M   G   +V +YSIL++G+C   ++  A+ L +EM+ + I P + TY  L
Sbjct: 215 DEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTIL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V+ A  +   M +  V  D   Y T +DG C    +  A  +F T+  +  
Sbjct: 275 VDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGV 334

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  YS +I+GLCK  R+  A  LF  + +  ++ D VTY  +I  LC  G++    D
Sbjct: 335 TPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWD 394

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M  +G  PD + +N L+    +N    + + L ++M ++
Sbjct: 395 LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQ 437


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/403 (36%), Positives = 228/403 (56%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G   + ++Y TLINGLC+ G T  AL    E++  N   G + +PD V
Sbjct: 281 QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL----ELLRRND--GKLVQPDVV 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIIDG+CK+  V+ A +L  +   K I PDV TYN++I GFC      +A  LF +M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V TFS+++D  CK+G ++EA  +L +M++  ++P+   Y++LMDG+CL   V
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A+ +F +M   G   NV SY+I+ING+CK K ++ A+ L+ EM  K I P V+TY++L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A +L DEM   G   D   Y + +D LCK  ++ +A+ L   L+    
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ L+ GLC+SG+L+ A ++F  L       DV  Y +MI   C  G  D+A  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  PD   +  ++L     +E     +LL  M  R
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP+ IT +T I G C  G    AL+  +++I            D V Y T+I+GLCK 
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHL------DQVSYGTLINGLCKV 311

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A ELL +   K + PDVV YN++I G C     N+A  L+ E + + + P+V T+
Sbjct: 312 GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++   C  GK+++A  L   M    + P+ + ++ L+DGFC  G +  AK +   M  
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              K +V +YS L++GYC   E+  A S+++ M  +G+   V +YN +  G  +I  V+ 
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KLF EM    +  D   Y + IDGLCK+G I  ALEL   +     + DI +Y+ ++D
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK   +  A  L   L    +  D+ TY I++  LC  GK++ A  +F D+  KG   
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D  A+  ++ G        + + LL +M+E
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEE 641



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 149/285 (52%)

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++  G +P+ +T +  +   C  G++ +A    + +I +G   +   Y TL++G C  G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               A EL    +    + +V  Y+ +I+G CK+K +  A  LYSE +SK I P V TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G   + +++ A  LF++M    +  D + +   +DG CK+G I EA  +   +   
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+ +YS L+DG C    +  A  +F+++    + A+V +YNIMI+  C    +D+A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             LF +M  K + PD + +++L+ G  ++   S  +EL+  M  R
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR 537



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 33/320 (10%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           +++N+A  LF  ++ Q   P  + F  I+  L K+        L + M   G++ N    
Sbjct: 89  HNNNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNC 148

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------ 222
           N L++ FC  G +  A  +            V+   IL + +   K +E    L      
Sbjct: 149 NILINSFCQLGLIPFAFSVLT--------RGVYWIEILKDCF-DRKNLEDFKRLCWIVLI 199

Query: 223 ---YSEMLSKGIKPTVVTYNTL--FIGLFEIHQ-------VERAFKLFDE-----MQRHG 265
              +  +  K    + + +N L  F  L E H+       + ++F++  E     + ++G
Sbjct: 200 LWDFKRLFLKDFLQSRL-FNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNG 258

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              DT    TFI G C  G I +AL     +  +   LD  SY  LI+GLCK G  K A 
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL       ++  DVV YN +I  +C D  ++ A DL+ +  +K + PD   +N L+ G 
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 386 IRNNETSKVVELLHRMDERN 405
               +    ++L ++M  +N
Sbjct: 379 CIVGKLKDAIDLFNKMTSKN 398


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/403 (36%), Positives = 224/403 (55%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L   ++  G   +V TY  LINGLC+ G T  A+    +M   N        P+ V
Sbjct: 164 RAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN------PNVV 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+T++DGLCK+G V +A  L L+M  K I P++VTY  +I+G C      EA  L  EM
Sbjct: 218 VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM 277

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  GV P++ + ++++D LCK GK+ +A  ++  MI +G  P+ F YN+L+D +CL  ++
Sbjct: 278 MKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQM 337

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  M S GC  ++ +Y+ LI+G+CK K I  A+ L  EM+  G  P VVT+ TL
Sbjct: 338 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 397

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +   A +LF  M ++G   +       +DGLCK+  + EAL LF  +     
Sbjct: 398 IGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL 457

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I  YS ++DG+C +G+L  A ELF  LP   L  +V  Y IMI+     G +DKA D
Sbjct: 458 DLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAED 517

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  +ME  G  PD   +N  + G +   E ++ ++ L  M ++
Sbjct: 518 LLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDK 560



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K++     PNV+ YST+++GLC+ G    AL L  EM +G G      KP+ V
Sbjct: 199 EAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM-SGKG-----IKPNLV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLC  G   +A  LL +M    + PD+ + N ++   C      +AK +   M
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V T++ ++D  C   +M+EA+++ ELM+  G  P+   Y +L+ G+C    +
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A  L   M  +G   +V +++ LI G+C+      A  L+  M   G  P + T   +
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +  A  LF  M++  +  +   Y   +DG+C  G +  ALELF  L     
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ++++ +Y+ +I+G  K G L  A +L  ++     + D  TYN+ +  L A+ ++ ++  
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK 552

Query: 362 LFLDMEAKGVAPD 374
               M  KG + D
Sbjct: 553 YLTMMRDKGFSVD 565



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 187/404 (46%), Gaps = 5/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +      P+VI ++ L+  + +  H   A++L +EM   +   G+  KPD  
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEM---HSSLGI--KPDTF 112

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I   +I+ LC    V     +L  M    + P VVT+  +I G C   D   A  L   +
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +V T+ V+++ LCK GK  EA   L  M +    PN  VY+T+MDG C  G V
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L + M   G K N+ +Y+ LI G C     + A SL  EM+  G+ P + + N L
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++ +A  +   M   G   D + Y + ID  C    + EA  +F  +    C
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ LI G CK   +  A  L   + +     DVVT+  +I   C  G+   A +
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LFL+M   G  P+      ++ G  ++   S+ + L H M++ N
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 456



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 6/283 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A ++   +   G  P+V TY++LI+  C       A  +FE M++        C PD 
Sbjct: 303 MQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG------CLPDI 356

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT++I G CK   ++KA  LL +M      PDVVT+ ++I GFC       AK LF+ 
Sbjct: 357 VAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLN 416

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ T ++I+D LCK+  + EA  L   M +  +  N  +Y+ ++DG C  G+
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A ELF  + + G + NV++Y+I+ING+ K   ++ A  L S M   G  P   TYN 
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 537 FVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTN 579


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 222/402 (55%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++K  G  PNV+TYST+I+G CR      A  LF +M+  NG     C P+ V 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVT 114

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++ GLC+ G +D+A ELL +M+++ + PD  +Y++++ G C     + A ++F +  
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +    P+VV +S ++  LCK G+++EA +L E M +    P+   +  LMDG C   R+ 
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++  +ME   C  NV +YS LI+G CK  ++  A  ++  M+ +GI+P VVTYN+L 
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V+ A  L +EM   G   D   Y T IDGLCK G   EA  LF  ++   C 
Sbjct: 295 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 354

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YSCLI G CK  R+ +A  LF  + +  ++ DVVT++ ++   C  G +D A  L
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M A   +PD   + +L+ G  +     +   +L RM +R
Sbjct: 415 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 456



 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 226/401 (56%), Gaps = 6/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G +P+  +Y TL+ GLC+TG   +AL +FE+  NG+      C PD V
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPPDVV 183

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I GLCK G +D+A +L  +M++ +  PDVVT+ +++ G C  +   EA+++   M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PNV+T+S ++D LCK G++ +A ++ + MI  G+ PN   YN+L+ GFC+T  V
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M + GC  ++ +Y+ LI+G CK      A  L+ +M +K   P V+TY+ L
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A  LFD+M +  V  D   + T ++G C  G + +A  L   +    C
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ L+DG CK GR+  A  +   + +     +VVTY  +I A C  GK   A+ 
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           L  +M   GV P+ + + +L+ G     +  +  ++L R++
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524



 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 213/370 (57%), Gaps = 6/370 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           CE NVIT++ +I+GLC+      A   F +M     + G V  P+   Y  +I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKM----KKKGTV--PNEWTYNVLINGFCKVH 56

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V +A  LL +MK+  + P+VVTY++VI GFC     + A +LF +M++ G  PN+VT++
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LC+NG M+EA +LL+ M + G++P+ F Y+TLM G C TG+++ A ++F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            C  +V +YS LI G CK   ++ A  L+ +M     +P VVT+  L  GL +  +++ A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            ++ + M+      +   Y + IDGLCK G + +A E+F+ + +   E ++ +Y+ LI G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            C +  +  A  L   +     + D++TYN +I  LC  G+  +A+ LF DM+AK   PD
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356

Query: 375 CVAFNTLMLG 384
            + ++ L+ G
Sbjct: 357 VITYSCLIGG 366



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 206/401 (51%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K++   CEP+V+T++ L++GLC+      A  + E M + N      C P+ +
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN------CTPNVI 253

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G V  A+E+  +M  + I P+VVTYNS+I GFC  N  + A  L  EM
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+++T++ ++D LCK G+  EA++L   M      P+   Y+ L+ GFC   R+
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ LF  M       +V ++S L+ GYC    ++ A  L  EM++    P V TY +L
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++  A ++   M + G   +   Y   ID  C+ G    A +L   +     
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGV 493

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
           + ++ +Y  LI G C +G L+ A ++   L R     AD+  Y +M+  LC  G+M  A 
Sbjct: 494 QPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAAL 553

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L   ++  G  P    +  L+ G  +  E  K +E+L  M
Sbjct: 554 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 189/349 (54%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+ + + +T +IDGLCK   + +A     +MK K   P+  TYN +I GFC  +  + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM + G+ PNVVT+S ++   C+  K++ A +L   M++ G  PN   YNTL+ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G ++ A EL   M   G + + FSY  L+ G CK  +I+ AL ++ +  +    P V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V Y+TL  GL +  +++ A KLF++M+ +    D   +   +DGLCK   + EA ++  T
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  ++ +YS LIDGLCK+G+++ A E+F  +    +  +VVTYN +IH  C    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D A  L  +M A G  PD + +NTL+ G  +     +   L   M  +
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 185/367 (50%), Gaps = 43/367 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G EPNV+TY++LI+G C T     AL L EEM          C PD +
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT------ATGCLPDII 323

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGLCK G   +A  L   MK K  NPDV+TY+ +I GFC     + A+ LF +M
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q V P+VVTFS +++  C  G +++A +LLE M+     P+ + Y +L+DGFC  GR+
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   M   GC+ NV +Y+ LI+ +C+  +   A  L  EM+  G++P V+TY +L
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFID---------------------- 278
             G      +E A K+ + ++R     AD +AYR  +D                      
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563

Query: 279 -------------GLCKNGYIVEALELFRTLRI-LKCELDIRSYSCLIDGLCKSGRLKIA 324
                        GLC+   + +A+E+   + +  K   +  +Y  +I  L + GR + A
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623

Query: 325 WELFHSL 331
             L   L
Sbjct: 624 NALADEL 630



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 129/242 (53%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   +  ++DG C   R+  A   F  M+  G   N ++Y++LING+CK  ++  A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM   G+ P VVTY+T+  G     +V+ A+KLF +M  +G   +   Y T + GLC+N
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + EA EL   +R    + D  SY  L+ GLCK+G++ +A ++F     G    DVV Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +I  LC  G++D+A  LF  M      PD V F  LM G  + +   +  ++L  M++
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 404 RN 405
           RN
Sbjct: 246 RN 247



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 113/210 (53%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           M C+ NV +++I+I+G CK   +  A + +++M  KG  P   TYN L  G  ++H+V R
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A+ L  EM+  G+A +   Y T I G C+   +  A +LFR +    C  ++ +Y+ L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC++G +  A+EL   +    L  D  +Y+ ++  LC  GK+D A  +F D       P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D VA++TL+ G  +     +  +L  +M E
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRE 210



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 8/189 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   GC+PNV+TY+ LI+  CR G   VA  L EEM+ GNG      +P+ 
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV-GNG-----VQPNV 497

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y ++I G C  G +++A+++L ++ +D+N   D+  Y  ++ G C     + A  L  
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 557

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM-IQIGVRPNAFVYNTLMDGFCLT 178
            +   G  P    +  ++  LC+  ++ +A ++LE M +    RPNA  Y  ++      
Sbjct: 558 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 617

Query: 179 GRVNRAKEL 187
           GR   A  L
Sbjct: 618 GRHEEANAL 626


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/403 (36%), Positives = 226/403 (56%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G   + ++Y TLINGLC+ G    AL L + +       G + +P+AV
Sbjct: 149 QALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAV 202

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  IID +CK   V+ A +L  QM  K I PDV TYN++I GF   +  N A  LF +M
Sbjct: 203 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKM 262

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV TF++++D  CK GK+ +A  +L +M++  ++P+   YN+LMDG+C   +V
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK++F SM S G   NV  Y+ ++NG+CK K ++ A++L+ EM  + I P VVTY++L
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++  A KL DEM   G   +   Y + +D LCKN ++ +A+ L   L+    
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI GLC+SGRL+ A  +F  L       DV  Y +MI   C  G  DKA  
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  P+   +  ++L     +E     +LL  M  R
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++F K+   G  P  IT++TLI GLC  GH   AL+  ++++            D V Y 
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHL------DQVSYG 170

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLCK G +  A +LL ++  K + P+ V YN +I   C A   N+A  L+ +M+ +
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+V T++ ++       K+  A  L   M +  + PN + +N L+DGFC  G+VN A
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA 290

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M     K +V +Y+ L++GYC   ++  A  ++  M S G+   V  Y T+  G
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +I  V+ A  LF+EM+   +  +   Y + IDGLCK G I  AL+L   +       +
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +YS ++D LCK+  +  A  L  +L    +  D+ TY I+I  LC  G+++ A ++F 
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+  KG   D  A+  ++ G        K + LL +M++
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMED 509



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 207/382 (54%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +++  G E +  T++ LIN   + G   ++ ++F +++           P A+ 
Sbjct: 80  ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYH------PTAIT 133

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+I GLC +G + +A     ++  +  + D V+Y ++I G C       A +L   + 
Sbjct: 134 FNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 193

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + VQPN V +++I+D +CK   + +A  L   M+   + P+ F YN L+ GF    ++N
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  M+      NV++++IL++G+CK  ++  A  + + M+   IKP VVTYN+L 
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   I++V +A  +FD M   GV A+   Y T ++G CK   + EA+ LF  +R  K  
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +YS LIDGLCK GR+  A +L   +       ++VTY+ ++ ALC +  +DKA  L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
             +++ +G+ PD   +  L+ G
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKG 455



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 35/351 (9%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           KN  P    +N ++     A   + A  L  +M   G++ +  TF+++++   + G    
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           +  +   +++ G  P A  +NTL+ G CL G +++A      + + G   +  SY  LIN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 209 GYCKNKEIEGALS-----------------------------------LYSEMLSKGIKP 233
           G CK   I  AL                                    LYS+M++K I P
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            V TYN L  G   + ++  A  LF++M++  +  + + +   +DG CK G + +A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +     + D+ +Y+ L+DG C   ++  A ++F S+  G +IA+V  Y  M++  C  
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +D+A +LF +M  + + P+ V +++L+ G  +       ++L+  M +R
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 6/316 (1%)

Query: 92  NPDVV-TYNSVIRGFCYANDSNEAKRLFIE-----MMDQGVQPNVVTFSVIMDELCKNGK 145
           NP+ +  + S IR F   +   + +   I      ++ +   P    F+ I+  L K   
Sbjct: 17  NPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKH 76

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
              A  L + M   G+  + F +N L++ F   G  + +  +F  +   G      +++ 
Sbjct: 77  HSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNT 136

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G C    I  AL  + +++++G     V+Y TL  GL ++ ++  A +L   +    
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL 196

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V  +   Y   ID +CK   + +A +L+  +   +   D+ +Y+ LI G     +L  A 
Sbjct: 197 VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAI 256

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF+ + +  +  +V T+NI++   C +GK++ A  +   M    + PD V +N+LM G 
Sbjct: 257 DLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316

Query: 386 IRNNETSKVVELLHRM 401
              N+ +K  ++   M
Sbjct: 317 CSINKVNKAKDIFDSM 332



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           F ++ +++   K K    ALSL+ +M   GI+    T+N L     ++     +F +F +
Sbjct: 62  FQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAK 121

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           + + G       + T I GLC  G+I +AL     +      LD  SY  LI+GLCK GR
Sbjct: 122 ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A +L   +   ++  + V YN++I  +C    ++ A DL+  M AK + PD   +N 
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           L+ G    ++ +  ++L ++M + N
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKEN 266


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/401 (38%), Positives = 233/401 (58%), Gaps = 11/401 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++ TK+   G EPN IT++TLI G+C  G    AL LF + +  +G      K D V Y 
Sbjct: 66  SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-LFHDHVVAHG-----FKLDQVSYA 119

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +++GLCK G    A ++L   +   +N DVV Y+++I   C      +A RL+ EM+ +
Sbjct: 120 ILMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNV TFS+++D LCK+ K ++A  LL +M++ GV+PN   Y  +MDG+CL  +VN+A
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +F  M   G + NV+ Y+I+ING CK K ++ A++L+ EM  K I P VVTYN L  G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++ ++  + +L DEM+  G   D   Y + +  LCKN ++ +A+ L + ++    + +
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           + +Y+ LIDGLCK GRL+ A+ +F   L  G  I  V TYN+MI+ LC  G  D+A  L 
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHIT-VWTYNVMINGLCKKGLFDEALALL 415

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ME     PD V++ T++       ET K  +LL  M  R
Sbjct: 416 SRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 195/371 (52%), Gaps = 9/371 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G + + ++Y+ L+NGLC+ G T  A+ +  +              D V
Sbjct: 98  EALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---------TWVNADVV 148

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCK  FV  A  L  +M  K I P+V T++ ++   C      +A  L   M
Sbjct: 149 MYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMM 208

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +GV+PNVVT+  IMD  C   ++ +A  +  +M+Q GV PN + YN +++G C   RV
Sbjct: 209 MKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRV 268

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M       +V +Y+ILI+G CK  +I  +L L  EM S G    ++TYN+L
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSL 328

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L + H +++A  L  E++  G+  +   Y T IDGLCK+G + +A  +F+ +     
Sbjct: 329 LHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGY 388

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            + + +Y+ +I+GLCK G    A  L   +     I D V+Y  +I+AL   G+  K + 
Sbjct: 389 HITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNK 448

Query: 362 LFLDMEAKGVA 372
           L   M  +G++
Sbjct: 449 LLCAMIVRGLS 459



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 205/372 (55%), Gaps = 9/372 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P ++ ++ ++  L +  H   A++LF ++     EF  + KP  V  T +++  C  G +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQL-----EFNGI-KPSIVTLTILMNCYCHTGGI 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
                +L ++      P+ +T+ ++I+G C    + EA      ++  G + + V+++++
Sbjct: 62  TFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAIL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M+ LCK G+   A Q+L    +  V  +  +Y+T++D  C    V  A  L+  M + G 
Sbjct: 122 MNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGI 178

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV+++SIL++  CK+++ + A++L + M+ KG+KP VVTY  +  G   ++QV +A  
Sbjct: 179 FPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALN 238

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F+ M + GV  + W Y   I+GLCK   + EA+ LF+ +   K   D+ +Y+ LIDGLC
Sbjct: 239 IFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLC 298

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G++  + EL   +       D++TYN ++HALC +  +D+A  L  +++ +G+ P+  
Sbjct: 299 KLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVC 358

Query: 377 AFNTLMLGCIRN 388
            + TL+ G  ++
Sbjct: 359 TYTTLIDGLCKD 370



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 16/338 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++ A G  PNV T+S L++ LC+      A+NL   M+      GV  KP+ V
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK----GV--KPNVV 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+DG C    V+KA  +   M  + + P+V  YN +I G C     +EA  LF EM
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+VVT+++++D LCK GK+  + +L++ M  IG   +   YN+L+   C    +
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  L   ++  G + NV +Y+ LI+G CK+  +E A  ++ E+L++G   TV TYN +
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVM 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +    + A  L   M+ +    D  +Y T I  L + G      E  +T ++L C
Sbjct: 399 INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG------ETVKTNKLL-C 451

Query: 302 ELDIRSYSCLID---GLCKSGRLKIAWELFHSLPRGVL 336
            + +R  S  +     +     L   W  + SL  G++
Sbjct: 452 AMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLEDGMI 489



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 169/347 (48%), Gaps = 3/347 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+  L K      A  L  Q++   I P +VT   ++  +C+         +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G +PN +TF+ ++  +C NG+  EA    + ++  G + +   Y  LM+G C 
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A ++   +       +V  YS +I+  CK K +  A  LYSEM++KGI P V T
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           ++ L   L +  + ++A  L   M + GV  +   Y   +DG C    + +AL +F  + 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E ++  Y+ +I+GLCK  R+  A  LF  +    +  DVVTYNI+I  LC  GK+ 
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +L  +M + G   D + +N+L+    +N+   + + L+  + ++
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQ 351



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 3/246 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+QI   P    +N ++           A  LF  +E  G K ++ + +IL+N YC    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I    S+ +++L  G +P  +T+ TL  G+    Q   A    D +  HG   D  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GLCK G    A+++ R   +     D+  YS +ID LCK   +  A+ L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWV---NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  +V T++I++ ALC D K  +A +L   M  KGV P+ V +  +M G    N+ +K +
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 396 ELLHRM 401
            + + M
Sbjct: 238 NIFNVM 243



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 38/316 (12%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     P ++ F+ I+  L K      A  L   +   G++P+      LM+ +C TG 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +     +   +  MG + N  +++ LI G C N +   AL  +  +++ G K   V+Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ +   A ++   +++  V AD   Y T ID LCK  ++ +A  L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT------------------ 342
              ++ ++S L+D LCK  + K A  L   + +  +  +VVT                  
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 343 -----------------YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                            YNI+I+ LC   ++D+A +LF +M  K + PD V +N L+ G 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 386 IRNNETSKVVELLHRM 401
            +  + S  +EL+  M
Sbjct: 298 CKLGKISTSLELVDEM 313


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  272 bits (695), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 222/403 (55%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   ++      +V TY  LINGLC+TG T+ A+    +M   N       KP+ V
Sbjct: 165 QAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNW------KPNVV 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TI+DGLCK+G V +A  L  +M  K + P++VTY  +I+G C      E   L  EM
Sbjct: 219 VYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEM 278

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++ ++ T ++++D  CK GK+ +A  ++  MI  G  P+ F YN+L+  +CL  ++
Sbjct: 279 IKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKM 338

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  +F  M S GC  ++  ++ LI+G+CK+K I   + L  EM   G  P VVT+ TL
Sbjct: 339 NEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTL 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +   A +LF  M ++G   +       +DGLCK   + EA+ L   +     
Sbjct: 399 IGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNL 458

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I  YS L+DG+C +G+L  AWELF SLP   L  +V TY IMI  LC  G +DKA D
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAED 518

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L ++ME  G  PD   +N  + G +   E ++ ++ L  M ++
Sbjct: 519 LLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 145/283 (51%), Gaps = 6/283 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A ++   +   G  P+V TY++LI+  C       A+ +F  M++        C PD 
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG------CLPDI 357

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V++T++I G CK+  ++K   LL +M      PDVVT+ ++I GFC A     AK LF+ 
Sbjct: 358 VVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLN 417

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ T +VI+D LCK   + EA  L E M +  +  N  +Y+ L+DG C  G+
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A ELF S+   G + NV++Y+I+I G CK   ++ A  L   M   G  P   TYN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 180/404 (44%), Gaps = 5/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  + +    P+V  ++ L+  + R  H   A++L + + +  G      + D +
Sbjct: 59  EALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLG-----IEADTI 113

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   V     +L  M    + P V+T  ++I G C   +  +A  L   M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHM 173

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                  +V T+ V+++ LCK G    A + L  M +   +PN  VY+T+MDG C  G V
Sbjct: 174 EKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G + N+ +Y+ LI G C     +   SL  EM+  G++  + T N L
Sbjct: 234 SEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNIL 293

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +V +A  +   M   G   D + Y + I   C    + EA+ +F  +    C
Sbjct: 294 VDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGC 353

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI  ++ LI G CK   +     L   + +   + DVVT+  +I   C  G+   A +
Sbjct: 354 LPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKE 413

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LFL+M   G  P+      ++ G  + N  S+ V L   M++ N
Sbjct: 414 LFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 146/322 (45%), Gaps = 50/322 (15%)

Query: 123 DQGVQPNVVTFSVIMDELCKNGK---MEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-- 177
           D     N   F + M  LCK+GK   ++EA  L + M  +   P+   + TL+ G  +  
Sbjct: 31  DTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDF-TLLLGVIVRL 89

Query: 178 ---TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
              T  ++  K +F    S+G + +  + +I+IN  C+ K +    S+   M   G++PT
Sbjct: 90  KHYTTAISLVKHIF---SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPT 146

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQR---------HGV------------AADTW-- 271
           V+T   L  GL     V +A  L D M++         +GV            AA  W  
Sbjct: 147 VMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLR 206

Query: 272 ------------AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
                        Y T +DGLCK+G + EAL L   +       ++ +Y+CLI GLC  G
Sbjct: 207 KMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFG 266

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R K    L   + +  +  D+ T NI++ A C +GK+ +A  +   M   G  PD   +N
Sbjct: 267 RWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYN 326

Query: 380 TLM-LGCIRN--NETSKVVELL 398
           +L+ + C++N  NE  +V  L+
Sbjct: 327 SLIHIYCLQNKMNEAMRVFHLM 348


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 222/402 (55%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++K  G  PNV+TYST+I+G CR      A  LF +M+  NG     C P+ V 
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVT 233

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++ GLC+ G +D+A ELL +M+++ + PD  +Y++++ G C     + A ++F +  
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +    P+VV +S ++  LCK G+++EA +L E M +    P+   +  LMDG C   R+ 
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++  +ME   C  NV +YS LI+G CK  ++  A  ++  M+ +GI+P VVTYN+L 
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V+ A  L +EM   G   D   Y T IDGLCK G   EA  LF  ++   C 
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 473

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YSCLI G CK  R+ +A  LF  + +  ++ DVVT++ ++   C  G +D A  L
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M A   +PD   + +L+ G  +     +   +L RM +R
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 575



 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 226/401 (56%), Gaps = 6/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G +P+  +Y TL+ GLC+TG   +AL +FE+  NG+      C PD V
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPPDVV 302

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I GLCK G +D+A +L  +M++ +  PDVVT+ +++ G C  +   EA+++   M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PNV+T+S ++D LCK G++ +A ++ + MI  G+ PN   YN+L+ GFC+T  V
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M + GC  ++ +Y+ LI+G CK      A  L+ +M +K   P V+TY+ L
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A  LFD+M +  V  D   + T ++G C  G + +A  L   +    C
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ L+DG CK GR+  A  +   + +     +VVTY  +I A C  GK   A+ 
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           L  +M   GV P+ + + +L+ G     +  +  ++L R++
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643



 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 215/375 (57%), Gaps = 6/375 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
            ++  CE NVIT++ +I+GLC+      A   F +M     + G V  P+   Y  +I+G
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKM----KKKGTV--PNEWTYNVLING 170

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            CK   V +A  LL +MK+  + P+VVTY++VI GFC     + A +LF +M++ G  PN
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +VT++ ++  LC+NG M+EA +LL+ M + G++P+ F Y+TLM G C TG+++ A ++F 
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 290

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
              +  C  +V +YS LI G CK   ++ A  L+ +M     +P VVT+  L  GL +  
Sbjct: 291 DNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 350

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A ++ + M+      +   Y + IDGLCK G + +A E+F+ + +   E ++ +Y+
Sbjct: 351 RLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYN 410

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI G C +  +  A  L   +     + D++TYN +I  LC  G+  +A+ LF DM+AK
Sbjct: 411 SLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470

Query: 370 GVAPDCVAFNTLMLG 384
              PD + ++ L+ G
Sbjct: 471 FCNPDVITYSCLIGG 485



 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 213/403 (52%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G  P+   Y+ +I+ LC+  +T  AL+ F  M          C+ + +
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---------ECEKNVI 127

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK   + +A     +MK K   P+  TYN +I GFC  +  + A  L  EM
Sbjct: 128 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 187

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PNVVT+S ++   C+  K++ A +L   M++ G  PN   YNTL+ G C  G +
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   G + + FSY  L+ G CK  +I+ AL ++ +  +    P VV Y+TL
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A KLF++M+ +    D   +   +DGLCK   + EA ++  T+    C
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LIDGLCK+G+++ A E+F  +    +  +VVTYN +IH  C    +D A  
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  +M A G  PD + +NTL+ G  +     +   L   M  +
Sbjct: 428 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 208/391 (53%), Gaps = 9/391 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K  G + NV TY+ L   L R        ++ +     NG +     P+   Y  +I GL
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILK-----NG-WPPGITPNVFTYAVVIQGL 69

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK G +DKA ELL +M++    PD   YN VI   C A ++ +A   F  M     + NV
Sbjct: 70  CKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNV 126

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           +T+++++D LCK  ++ EA+     M + G  PN + YN L++GFC   +V+RA  L   
Sbjct: 127 ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKE 186

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+  G   NV +YS +I+G+C+  +++ A  L+ +M+  G  P +VTYNTL  GL     
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++ A++L DEM+  G+  D ++Y T + GLCK G I  AL++F       C  D+ +YS 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI GLCK+GRL  A +LF  +       DVVT+  ++  LC   ++ +A  +   ME + 
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             P+ + +++L+ G  +  +     E+  RM
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 205/401 (51%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K++   CEP+V+T++ L++GLC+      A  + E M + N      C P+ +
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN------CTPNVI 372

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G V  A+E+  +M  + I P+VVTYNS+I GFC  N  + A  L  EM
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+++T++ ++D LCK G+  EA++L   M      P+   Y+ L+ GFC   R+
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ LF  M       +V ++S L+ GYC    ++ A  L  EM++    P V TY +L
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++  A ++   M + G   +   Y   ID  C+ G    A  L   +     
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGV 612

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
           + ++ +Y  LI G C +G L+ A ++   L R     AD+  Y +M+  LC  G+M  A 
Sbjct: 613 QPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAAL 672

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L   ++  G  P    +  L+ G  +  E  K +E+L  M
Sbjct: 673 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 185/367 (50%), Gaps = 43/367 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G EPNV+TY++LI+G C T     AL L EEM          C PD +
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT------ATGCLPDII 442

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGLCK G   +A  L   MK K  NPDV+TY+ +I GFC     + A+ LF +M
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q V P+VVTFS +++  C  G +++A +LLE M+     P+ + Y +L+DGFC  GR+
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   M   GC+ NV +Y+ LI+ +C+  +   A  L  EM+  G++P V+TY +L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFID---------------------- 278
             G      +E A K+ + ++R     AD +AYR  +D                      
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682

Query: 279 -------------GLCKNGYIVEALELFRTLRI-LKCELDIRSYSCLIDGLCKSGRLKIA 324
                        GLC+   + +A+E+   + +  K   +  +Y  +I  L + GR + A
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742

Query: 325 WELFHSL 331
             L   L
Sbjct: 743 NALADEL 749



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 174/343 (50%), Gaps = 3/343 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  + + L +   +D+   +L       I P+V TY  VI+G C + D ++A  L  EM 
Sbjct: 27  YNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMR 86

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  P+   ++ ++  LCK       ++ L+    +    N   +  ++DG C   R+ 
Sbjct: 87  ESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLP 143

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A   F  M+  G   N ++Y++LING+CK  ++  A  L  EM   G+ P VVTY+T+ 
Sbjct: 144 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 203

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +V+ A+KLF +M  +G   +   Y T + GLC+NG + EA EL   +R    +
Sbjct: 204 HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 263

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  SY  L+ GLCK+G++ +A ++F     G    DVV Y+ +I  LC  G++D+A  L
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F  M      PD V F  LM G  + +   +  ++L  M++RN
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 8/189 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   GC+PNV+TY+ LI+  CR G   VA  L EEM+ GNG      +P+ 
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV-GNG-----VQPNV 616

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y ++I G C  G +++A+++L ++ +D+N   D+  Y  ++ G C     + A  L  
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM-IQIGVRPNAFVYNTLMDGFCLT 178
            +   G  P    +  ++  LC+  ++ +A ++LE M +    RPNA  Y  ++      
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 736

Query: 179 GRVNRAKEL 187
           GR   A  L
Sbjct: 737 GRHEEANAL 745


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 149/399 (37%), Positives = 232/399 (58%), Gaps = 8/399 (2%)

Query: 3    AAALFTKLKAFG-CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF +++  G C P+V TYST+++ L ++G    A  L E+M++        C P+ V
Sbjct: 931  ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG------CSPNVV 984

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y++++ GLCK G +D+A  LL +M     +P++VTYN++I G C     +EA  L  EM
Sbjct: 985  TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +D G QPNVVT++V++D  CK GK E+A  L+E+M++ G  PN F YN+L+D FC    V
Sbjct: 1045 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 1104

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             RA +L  SM   GC  NV SY+ +I G CK  ++   + L  +MLS    P +VT+NT+
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 1164

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RILK 300
               + + ++V+ A++LF+ +Q  G   +   Y + + GLCK+    +A  L R + R   
Sbjct: 1165 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            C  DI +Y+ +IDGLCKS R+  A++LF  +    L  D VTY+I+I +LC    MD+A+
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 361  DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            ++   M   G  P  + + TL+ G  +     K +E+L 
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 1323



 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 218/404 (53%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  PNV +Y+T+++G C+      AL L E+M+         C PD V
Sbjct: 248 DAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG------CPPDVV 301

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+GLCK   VD+A  ++ +M  +   P+V+TY +++ GFC   D + A  L  +M
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +PN +T++ IM   C+   ME A Q+L++MIQ G  P+A  Y+T++ GFC  G++
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   GC+ +V   S LI+  CK   I+ A  L    +     P VV Y+ L
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++  A    D M ++    D   Y + +DGLCK+  I +A  LF  +R    
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS +I   CK   L  A+++   +     + DVVTY+ +I+ LC  G +DKA D
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +F +M   G AP+ V +NTL+ G  + N+  +  E+L  M +++
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   GC P+V++Y+T+INGLC+      A  + ++MI         C+P+ + 
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG------CQPNVIT 337

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++DG C+ G +D A EL+ +M ++   P+ +TYN+++  FC  ND   A ++   M+
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+ + +S I+   CK GK+ EA  LLE MI+ G RP+    +TL+D  C    ++
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+EL      M C  +V +YSILI+  CK K +  A S    M+     P VVTYN++ 
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  ++  AF LFD M+  GV  D   Y   I   CK+  +  A ++   ++  KC 
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YS LI+GLCK+G +  A+++F  +       ++VTYN +I  LC   K+++A ++
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              M  +   PD + +  L+ G    +   +   +L  M ++
Sbjct: 638 LEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDK 679



 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 221/403 (54%), Gaps = 7/403 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA AL  ++   GC PN++TY+T+I+G C+ G    A +L EEM++G       C+P+ V
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVV 1054

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT ++D  CK G  + A  L+  M +K   P++ TYNS++  FC  ++   A +L   M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G  PNVV+++ ++  LCK  K+ E   LLE M+     P+   +NT++D  C T RV
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
            + A ELF  ++  GC  N+ +Y+ L++G CK++  + A  L  EM  K G  P ++TYNT
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            +  GL +  +V+RA+KLF +M   G+A D   Y   I  LCK  ++ EA  +   +    
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +    +Y  LIDG CK+G L  A E+   L       DVVT++I I  L   G++ +A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 361  DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +L   M   G+ PD V +NTL+ G    + T   V+L   M +
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/400 (36%), Positives = 215/400 (53%), Gaps = 9/400 (2%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  L  ++   G   NVI ++ +I GLC       AL LF+EM     E    C PD   
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM-----EESGSCPPDVFT 950

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            Y+TI+D L K G VD A  L+  M  K  +P+VVTY+S++ G C A   +EA  L   M 
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010

Query: 123  DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G  PN+VT++ I+D  CK G+++EA  LLE M+  G +PN   Y  L+D FC  G+  
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             A  L   M   G   N+F+Y+ L++ +CK  E+E A  L S M+ KG  P VV+YNT+ 
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 1130

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             GL +  +V     L ++M  +    D   + T ID +CK   +  A ELF  ++   C 
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ L+ GLCKS R   A  L   + R    + D++TYN +I  LC   ++D+A+ 
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIR---NNETSKVVELL 398
            LFL M + G+APD V ++ ++    +    +E + V+EL+
Sbjct: 1251 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290



 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 211/415 (50%), Gaps = 30/415 (7%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNG--------------------------- 50
           + +TYSTLI+G  R G  + A  LF+EM N  G                           
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEM-NRKGLKAHAGVHKSILRGLCDAGQCSDAVLH 218

Query: 51  --EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
             E    C PD+V Y T+I+GL K   +D A  LL +M D    P+V +YN+V+ GFC A
Sbjct: 219 FREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N    A  L  +M+ +G  P+VV+++ +++ LCK  +++EA ++++ MIQ G +PN   Y
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
            TL+DGFC  G ++ A EL   M   G + N  +Y+ +++ +C+  ++E A  +   M+ 
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G  P  + Y+T+  G  +  ++  A  L ++M R G   D     T ID LCK   I  
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A EL R    + C  D+ +YS LI  LCK+ RL  A      + +     DVVTYN ++ 
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LC   +++ A  LF  M A GV PD V ++ ++    ++N      ++L RM E
Sbjct: 519 GLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 201/396 (50%), Gaps = 29/396 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------INGNGEF 52
           EA  +  K+   GC+PNVITY TL++G CR G    A+ L  +M         I  N   
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377

Query: 53  GVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            V C+                    PDA+ Y+TII G CK G + +A +LL QM  +   
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV   +++I   C A   + A+ L    +     P+VV +S+++  LCK  ++ EA   
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESW 497

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L++M++    P+   YN+++DG C + R+N A  LF  M + G   +V +YSI+I+ +CK
Sbjct: 498 LDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCK 557

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  ++ A  +   M      P VVTY+ L  GL +   V++AF +F EM   G A +   
Sbjct: 558 DNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T IDGLCK   + +A E+   +R   C  D  +Y+CLI+GLC + RL+ AW +   + 
Sbjct: 618 YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
               + D +TY  ++ AL     ++    L  +MEA
Sbjct: 678 DKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 1/351 (0%)

Query: 56   CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
            C P+   +T +I GLC+ G +  A ELL +M    +  +V+ +N VI+G C A   + A 
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932

Query: 116  RLFIEMMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             LF EM + G   P+V T+S I+D L K+GK+++A +L+E M+  G  PN   Y++L+ G
Sbjct: 933  ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992

Query: 175  FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
             C  G+++ A  L   M   GC  N+ +Y+ +I+G+CK   I+ A  L  EM+  G +P 
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 235  VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VVTY  L     +  + E A  L + M   G   + + Y + +D  CK   +  A +L  
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 295  TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++    C  ++ SY+ +I GLCK+ ++     L   +     + D+VT+N +I A+C   
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 355  KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            ++D A++LF  ++  G  P+ V +N+L+ G  ++    +   LL  M  + 
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 211/402 (52%), Gaps = 28/402 (6%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   L  ++ +  C P+++T++T+I+ +C+T    +A  LF  +I  +G     C P+ V
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN-LIQESG-----CTPNLV 1194

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y +++ GLCK    D+A+ LL +M + +  +PD++TYN+VI G C +   + A +LF++
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+  G+ P+ VT+S+++  LCK   M+EA+ +LELM++ G  P A  Y TL+DGFC TG 
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +++A E+   + S G   +V ++SI I+   K   +  A  L   ML  G+ P  VTYNT
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC-KNGYIVEALELFRTL--- 296
            L  G  +    E A  LF+ M++ G   D   Y T +  L  K  Y     E+ +++   
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDT 1434

Query: 297  -------------RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
                           ++ E D+R    ++D   K G  + A ++F  + +     +VV +
Sbjct: 1435 GFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ----RNVVLW 1490

Query: 344  NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            + M+       + ++A  L+  M  +GV PD V F +L+  C
Sbjct: 1491 SAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMC 1532



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 196/422 (46%), Gaps = 40/422 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +  +   + L+N L +      A +LF   I G  ++G     D V Y+T+I G  + 
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEG--QWG----GDTVTYSTLISGFIRA 174

Query: 74  GFVDKAKELLLQMKDKNIN----------------------------------PDVVTYN 99
           G +  A EL  +M  K +                                   PD VTYN
Sbjct: 175 GKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYN 234

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           ++I G   ++  ++A RL  EM+D G  PNV +++ ++   CK  ++E A  LLE M+  
Sbjct: 235 TMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  P+   Y T+++G C   +V+ A  +   M   GC+ NV +Y  L++G+C+  +++GA
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 354

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L  +M  +G +P  +TYN +       + +ERA ++   M + G   D   Y T I G
Sbjct: 355 VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
            CK G + EA +L   +    C  D+   S LID LCK+  +  A EL           D
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VV Y+I+IHALC   ++ +A      M      PD V +N+++ G  ++   +    L  
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534

Query: 400 RM 401
           RM
Sbjct: 535 RM 536



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 171/333 (51%), Gaps = 9/333 (2%)

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            GF D A         +  N D  T N +++         +A +++   +     PN+ TF
Sbjct: 829  GFFDWAT------SQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTF 880

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            ++++  LC+ G +  A +LL+ M + GV  N  ++N ++ G C   +++ A ELF  ME 
Sbjct: 881  TILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEE 940

Query: 194  MG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G C  +VF+YS +++   K+ +++ A  L  +M+SKG  P VVTY++L  GL +  +++
Sbjct: 941  SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000

Query: 253  RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
             A  L   M R G + +   Y T IDG CK G I EA  L   +    C+ ++ +Y+ L+
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 1060

Query: 313  DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            D  CK G+ + A  L   +     + ++ TYN ++   C   ++++A  L   M  KG  
Sbjct: 1061 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 1120

Query: 373  PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P+ V++NT++ G  +  +  + V LL +M   N
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 188/437 (43%), Gaps = 94/437 (21%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  LF  ++  GC PN++TY++L++GLC++     A  L  EM    G     C PD + 
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG-----CSPDIIT 1231

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPD---------------------------- 94
            Y T+IDGLCK   VD+A +L LQM    + PD                            
Sbjct: 1232 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 1291

Query: 95   -------VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                    +TY ++I GFC   + ++A  +   ++ +G  P+VVTFS+ +D L K G++ 
Sbjct: 1292 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351

Query: 148  EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
            +A +LLE M++ G+ P+   YNTL+ GFC       A +LF  M   GC+ +  +Y+ L+
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411

Query: 208  NGYCKNKE------------IEGALSLYSEMLSK-------------------------- 229
                  K             ++    L  E+ SK                          
Sbjct: 1412 GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGS 1471

Query: 230  ---------GIKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
                     G+    V   +  +G++  H Q E+AF L+  M   GV  D   + + +  
Sbjct: 1472 PQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTM 1531

Query: 280  LCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
             C  G +  A++ F ++ R    E  +  +SC+ID L + G +  A +L   +P      
Sbjct: 1532 CCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMP---CKP 1588

Query: 339  DVVTYNIMIHA--LCAD 353
               T+N ++ A  +C D
Sbjct: 1589 SAATWNCLLSAYKICGD 1605



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 155/306 (50%), Gaps = 1/306 (0%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N ++     A+  ++A  LF   ++     + VT+S ++    + GK+  A +L + M +
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++ +A V+ +++ G C  G+ + A   F  M S  C  +  +Y+ +ING  K+  ++ 
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 248

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+ L  EM+  G  P V +YNT+  G  + ++VE A  L ++M   G   D  +Y T I+
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK   + EA  +   +    C+ ++ +Y  L+DG C+ G L  A EL   +       
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           + +TYN ++H  C    M++AH +   M   G  PD + ++T++ G  +  +  +  +LL
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 399 HRMDER 404
            +M  R
Sbjct: 429 EQMIRR 434



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 1/210 (0%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G +H +F  + L+N   K  +   A  L+   +        VTY+TL  G     ++  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           ++LFDEM R G+ A    +++ + GLC  G   +A+  FR +    C  D  +Y+ +I+G
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMING 239

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           L KS RL  A  L   +       +V +YN ++H  C   +++ A  L   M  +G  PD
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V++ T++ G  + ++  +   ++ +M +R
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQR 329



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 39/278 (14%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  L   +   G  P+ +TY+TL+ G C    T  A++LFE M          C+PD  
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG------CEPDNA 1405

Query: 62   IYTTIIDGLC-KEGFVDKAKELLLQMKDKN----------------INPDVVTYNSVIRG 104
             YTT++  L  K+ + D   E+   M D                  +  DV    +++  
Sbjct: 1406 TYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDM 1465

Query: 105  FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            F       +A+++F E MDQ    NVV +S ++     + + E+A  L  +M   GV P+
Sbjct: 1466 FGKCGSPQDARKVF-EGMDQ---RNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPD 1521

Query: 165  AFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
            A  + +L+   C  G ++ A + FVS+    G +  V  +S +I       ++ G L L 
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVI-------DLLGRLGLV 1574

Query: 224  SE----MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +E    ML    KP+  T+N L          ERA ++
Sbjct: 1575 NEAEDLMLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 6/320 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G +P+V TY+T+INGLC+ G T+ A  LF++M    GE G  C+PD V Y+TIID LC
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAG--CQPDVVTYSTIIDSLC 56

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K+  V++A ++   MK K I+P++ TYNS+I+G C  +   EA  +  EMM   + PN+V
Sbjct: 57  KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 116

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TFS++++  CK G + EA  +L+ M ++GV PN   Y++LM+G+ L   V  A++LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            + GCK +VFSY+ILINGYCK K I  A  L++EM+ +G+ P +V+YNTL  GL ++ ++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A  LF  M  +G   D   Y   +DG CK GY+ +A  LFR ++    + ++  Y+ L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 312 IDGLCKSGRLKIAWELFHSL 331
           ID +CKS  LK A +LF  L
Sbjct: 297 IDAMCKSRNLKEARKLFSEL 316



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/318 (36%), Positives = 180/318 (56%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +PD   YTTII+GLCK G    A  L  +M +    PDVVTY+++I   C     NEA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  +G+ PN+ T++ ++  LC   +  EAS +L  M+ + + PN   ++ L++ FC
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G V  A+ +  +M  MG + NV +YS L+NGY    E+  A  L+  M++KG KP V 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +YN L  G  +  ++  A +LF+EM   G+  D  +Y T IDGLC+ G + EA +LF+ +
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +YS L+DG CK G L  A+ LF ++    L  ++V YNI+I A+C    +
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 357 DKAHDLFLDMEAKGVAPD 374
            +A  LF ++  +G+ P+
Sbjct: 307 KEARKLFSELFVQGLQPN 324



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 162/297 (54%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M  +   PDV TY ++I G C   ++  A  LF +M + G QP+VVT+S I+D LCK+ +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           + EA  +   M   G+ PN F YN+L+ G C   R   A  +   M S+    N+ ++S+
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +CK   +  A  +   M   G++P VVTY++L  G     +V  A KLFD M   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D ++Y   I+G CK   I EA +LF  +       DI SY+ LIDGLC+ GRL+ A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +LF ++     + D+ TY+I++   C  G + KA  LF  M++  + P+ V +N L+
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 6/306 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA LF K+   GC+P+V+TYST+I+ LC+      AL++F  M    G       P+   
Sbjct: 29  AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM-KAKG-----ISPNIFT 82

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++I GLC      +A  +L +M   NI P++VT++ +I  FC   +  EA+ +   M 
Sbjct: 83  YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV+PNVVT+S +M+      ++ EA +L ++MI  G +P+ F YN L++G+C   R+ 
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK+LF  M   G   ++ SY+ LI+G C+   +  A  L+  ML+ G  P + TY+ L 
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   + +AF+LF  MQ   +  +   Y   ID +CK+  + EA +LF  L +   +
Sbjct: 263 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 322

Query: 303 LDIRSY 308
            +++ +
Sbjct: 323 PNMKHW 328



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 159/275 (57%), Gaps = 6/275 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+ +KA G  PN+ TY++LI GLC       A  +  EM++ N        P+ V
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I+  CKEG V +A+ +L  M +  + P+VVTY+S++ G+    +  EA++LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P+V +++++++  CK  ++ EA QL   MI  G+ P+   YNTL+DG C  GR+
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF +M + G   ++ +YSIL++G+CK   +  A  L+  M S  +KP +V YN L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
              + +   ++ A KLF E+   G+  +   ++ F
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 153/284 (53%), Gaps = 2/284 (0%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G QP+V T++ I++ LCK G+   A+ L + M + G +P+   Y+T++D  C   R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A ++F  M++ G   N+F+Y+ LI G C       A ++ +EM+S  I P +VT+ +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF-S 119

Query: 241 LFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L I +F +   V  A  +   M   GV  +   Y + ++G      + EA +LF  +   
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ D+ SY+ LI+G CK+ R+  A +LF+ +    L  D+V+YN +I  LC  G++ +A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           HDLF +M   G  PD   ++ L+ G  +    +K   L   M  
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 59/102 (57%)

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ +I+GLCK G    A  LF  +       DVVTY+ +I +LC D ++++A D+F
Sbjct: 9   DVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 68

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M+AKG++P+   +N+L+ G    +   +   +L+ M   N
Sbjct: 69  SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 110


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 231/400 (57%), Gaps = 8/400 (2%)

Query: 2   EAAALFTKLKAFG-CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            A  LF +++  G C P+V TYST+++ L ++G    A  L E M++        C P+ 
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG------CSPNV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y++++ GLCK G +D+A  LL +M     +P++VTYN++I G C     +EA  L  E
Sbjct: 256 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G QPNVVT++V++D  CK GK E+A  L+E+M++ G  PN F YN+L+D FC    
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V RA +L  SM   GC  NV SY+ +I G CK  ++   + L  +MLS    P +VT+NT
Sbjct: 376 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RIL 299
           +   + + ++V+ A++LF+ +Q  G   +   Y + + GLCK+    +A  L R + R  
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  DI +Y+ +IDGLCKS R+  A++LF  +    L  D VTY+I+I +LC    MD+A
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 555

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +++   M   G  P  + + TL+ G  +     K +E+L 
Sbjct: 556 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ 595



 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 227/402 (56%), Gaps = 8/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K+   GC+PNVITY TL++G CR G    A+ L  +M     E G   +P+A+
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT----ERGY--RPNAI 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  I+ GLC    +D A +L  +M++  +  PDV TY++++     +   ++A RL   
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVVT+S ++  LCK GK++EA+ LL+ M + G  PN   YNT++DG C  GR
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M   GC+ NV +Y++L++ +CK  + E A+ L   M+ KG  P + TYN+
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +  +VERA +L   M + G   +  +Y T I GLCK   + E + L   +    
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  DI +++ +ID +CK+ R+ IA+ELF+ +       ++VTYN ++H LC   + D+A 
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485

Query: 361 DLFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  K G +PD + +NT++ G  ++    +  +L  +M
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527



 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/400 (36%), Positives = 217/400 (54%), Gaps = 9/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  K+   G  PN ITY+ +++GLC       AL LF+EM     E    C PD   
Sbjct: 168 AVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM-----EESGSCPPDVFT 222

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+TI+D L K G VD A  L+  M  K  +P+VVTY+S++ G C A   +EA  L   M 
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN+VT++ I+D  CK G+++EA  LLE M+  G +PN   Y  L+D FC  G+  
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G   N+F+Y+ L++ +CK  E+E A  L S M+ KG  P VV+YNT+ 
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +V     L ++M  +    D   + T ID +CK   +  A ELF  ++   C 
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHD 361
            ++ +Y+ L+ GLCKS R   A  L   + R    + D++TYN +I  LC   ++D+A+ 
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIR---NNETSKVVELL 398
           LFL M + G+APD V ++ ++    +    +E + V+EL+
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 562



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 221/403 (54%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC PN++TY+T+I+G C+ G    A +L EEM++G       C+P+ V
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D  CK G  + A  L+  M +K   P++ TYNS++  FC  ++   A +L   M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNVV+++ ++  LCK  K+ E   LLE M+     P+   +NT++D  C T RV
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
           + A ELF  ++  GC  N+ +Y+ L++G CK++  + A  L  EM  K G  P ++TYNT
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +V+RA+KLF +M   G+A D   Y   I  LCK  ++ EA  +   +    
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +    +Y  LIDG CK+G L  A E+   L       DVVT++I I  L   G++ +A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +L   M   G+ PD V +NTL+ G    + T   V+L   M +
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 218/392 (55%), Gaps = 7/392 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+ +TY+T+INGL ++     A+ L EEM++ NG F     P+   Y T++ G CK  
Sbjct: 40  CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD-NG-FA----PNVFSYNTVLHGFCKAN 93

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V+ A  LL QM  +   PDVV+Y +VI G C  +  +EA R+  +M+ +G QPNV+T+ 
Sbjct: 94  RVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 153

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D  C+ G ++ A +L+  M + G RPNA  YN +M G C   +++ A +LF  ME  
Sbjct: 154 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213

Query: 195 G-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           G C  +VF+YS +++   K+ +++ A  L   M+SKG  P VVTY++L  GL +  +++ 
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDE 273

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L   M R G + +   Y T IDG CK G I EA  L   +    C+ ++ +Y+ L+D
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK G+ + A  L   +     + ++ TYN ++   C   ++++A  L   M  KG  P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + V++NT++ G  +  +  + V LL +M   N
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 219/404 (54%), Gaps = 7/404 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   GC P+V++Y+T+INGLC+      A  + ++MI         C+P+ + 
Sbjct: 98  ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG------CQPNVIT 151

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++DG C+ G +D A EL+ +M ++   P+ +TYN+++ G C     + A +LF EM 
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + G   P+V T+S I+D L K+GK+++A +L+E M+  G  PN   Y++L+ G C  G++
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   GC  N+ +Y+ +I+G+CK   I+ A  L  EM+  G +P VVTY  L
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  + E A  L + M   G   + + Y + +D  CK   +  A +L  ++    C
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ +I GLCK+ ++     L   +     + D+VT+N +I A+C   ++D A++
Sbjct: 392 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  ++  G  P+ V +N+L+ G  ++    +   LL  M  + 
Sbjct: 452 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 213/392 (54%), Gaps = 8/392 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +   + +++ GLC  G    A+  F EM          C PD+V Y T+I+GL K 
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDSVTYNTMINGLSKS 57

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A  LL +M D    P+V +YN+V+ GFC AN    A  L  +M+ +G  P+VV++
Sbjct: 58  DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSY 117

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++ LCK  +++EA ++++ MIQ G +PN   Y TL+DGFC  G ++ A EL   M  
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVE 252
            G + N  +Y+ +++G C  ++++ AL L+ EM   G   P V TY+T+   L +  +V+
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L + M   G + +   Y + + GLCK G + EA  L + +    C  +I +Y+ +I
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK GR+  A+ L   +  G    +VVTY +++ A C  GK + A  L   M  KG  
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           P+   +N+L+    + +E  +  +LL  M ++
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 162/280 (57%), Gaps = 7/280 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++ +  C P+++T++T+I+ +C+T    +A  LF  +I  +G     C P+ V
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN-LIQESG-----CTPNLV 466

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y +++ GLCK    D+A+ LL +M + +  +PD++TYN+VI G C +   + A +LF++
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P+ VT+S+++  LCK   M+EA+ +LELM++ G  P A  Y TL+DGFC TG 
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A E+   + S G   +V ++SI I+   K   +  A  L   ML  G+ P  VTYNT
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L  G  +  + E A  LF+ M++ G   D   Y T +  L
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 169/315 (53%), Gaps = 7/315 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L + +   GC PNV++Y+T+I GLC+       + L E+M++ N      C PD V
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN------CVPDIV 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + TIID +CK   VD A EL   +++    P++VTYNS++ G C +   ++A+ L  EM
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              QG  P+++T++ ++D LCK+ +++ A +L   M+  G+ P+   Y+ ++   C    
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +   M   G      +Y  LI+G+CK   ++ AL +   +LSKG  P VVT++ 
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
               L +  ++ +A +L + M R G+  DT  Y T + G C      +A++LF  +R   
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671

Query: 301 CELDIRSYSCLIDGL 315
           CE D  +Y+ L+  L
Sbjct: 672 CEPDNATYTTLVGHL 686



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 132/266 (49%), Gaps = 41/266 (15%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  ++  GC PN++TY++L++GLC++     A  L  EM    G     C PD + 
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG-----CSPDIIT 503

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPD---------------------------- 94
           Y T+IDGLCK   VD+A +L LQM    + PD                            
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 95  -------VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                   +TY ++I GFC   + ++A  +   ++ +G  P+VVTFS+ +D L K G++ 
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A +LLE M++ G+ P+   YNTL+ GFC   R   A +LF  M   GC+ +  +Y+ L+
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683

Query: 208 NGYCKNKEIEGALSLYSE-MLSKGIK 232
                 K  +  L+  S+ M+  G K
Sbjct: 684 GHLVDKKSYKDLLAEVSKSMVDTGFK 709


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 149/400 (37%), Positives = 230/400 (57%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+  T++ LI      G    A+ +F EM     + GV  KPD V Y T
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPDVVTYRT 437

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   YN +I+GFC      +AK L  E+M+ G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  ++V FS I++ LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A 
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 557

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP+ + Y+ +  GL
Sbjct: 558 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           FE  +   A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I
Sbjct: 618 FEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 677

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +IDG+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  
Sbjct: 678 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 737

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  P+    N ++   ++ NE  +    L ++DERN
Sbjct: 738 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 777



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 214/390 (54%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+ Y+T+I+G  + G    A +LF+EM+    + G+   PD V Y +++  LCK  
Sbjct: 218 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYNSVVHALCKAR 271

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + P+  TYN++I G+       EA R+F EM    + P+VVT S
Sbjct: 272 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 331

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++M  LCK GK++EA  + + M   G  P+ F YN +++G+   G +    +LF  M   
Sbjct: 332 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 391

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   + +++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GVA D +AY   I G C +G +++A EL   +      LDI  +S +I+ 
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L  D V YN+++   C  GKM+KA  +F  M + G+ P+
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M +R
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQR 601



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 186/375 (49%), Gaps = 5/375 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G  + A+ LF    +   +   V  P +  Y  ++D   +    + A     Q+   
Sbjct: 86  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 143

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  +++  N ++ GFC A  ++EA  + +    + G  P+V ++S+++  LC  GK  +
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++K + P   TYN L  G     Q + A ++F EM+RH +
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ SY+ +++G    G L    +
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +    +  D  T+N++I A    G +DKA  +F +M   GV PD V + T++    
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 387 RNNETSKVVELLHRM 401
           R  +    +E  ++M
Sbjct: 444 RIGKMDDAMEKFNQM 458



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 537

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y  ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 538 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 597

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +S+I+D L + G+   A      M + G+  +   YN ++ G      
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P+VVTY+ 
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 717

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A
Sbjct: 718 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 119/225 (52%), Gaps = 6/225 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  + + G EPNV+ Y TL+NG C+ G     L+LF EM+    + G+  KP  +
Sbjct: 555 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML----QRGI--KPSTI 608

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ IIDGL + G    AK    +M +  I  D+ TYN V+RG       +EA  LF E+
Sbjct: 609 LYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ N++T + ++D + +  ++EEA  L   + +  + P+   Y+ ++      G V
Sbjct: 669 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLV 728

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
             A+++F SM++ GC+ N    + ++    K  EI  A +  S++
Sbjct: 729 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+A   + N+IT +T+I+G+ +T     A +LF  +            P  V
Sbjct: 660 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR------LVPSVV 713

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I  L KEG V++A+++   M++    P+    N V+R     N+   A     ++
Sbjct: 714 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++      +T  +++D     G   E  + L
Sbjct: 774 DERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 52/204 (25%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVE--------------- 288
           E A  L DE+QR G          F+  L        C++G  +                
Sbjct: 49  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 108

Query: 289 ------------------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                                   AL  F  L      ++I   + L++G C++ R   A
Sbjct: 109 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 168

Query: 325 WE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNT 380
            + L H  P    + DV +Y+I++ +LC  GK  +A DL L M A+G A   P+ VA+NT
Sbjct: 169 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNT 227

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  +  + +K  +L   M +R
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQR 251


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/404 (35%), Positives = 223/404 (55%), Gaps = 1/404 (0%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG-EFGVVCKPDA 60
            A  LF  +K+  C P+++TY+TL++GL RTG    A+ LF+EM++    +    C P+ 
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y+ +IDGLCK   V +A ELL  MK +  +PDV+TY  ++ G C  +    A  +  E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G  PN+VT++ ++  LC+  ++ +A  L+  M   G  PN   Y TL+DG C  GR
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +   M   G   ++  Y++LING CK  +++ +++L    +S GIKP VVTY++
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL   ++++ A +L   ++  G   D   Y T IDGLCK G + EA +L+  +    
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D+ +YS LIDGLCK+GR+  A  L   + R       +TYN +I  LC    +D+A 
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +L  +ME    AP  V +N L+ G  R       V LL +   R
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR 535



 Score =  267 bits (682), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/411 (34%), Positives = 226/411 (54%), Gaps = 13/411 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  +++  GCEPNV+TY++LI+GLC+      A  LFE M +      V C P  V
Sbjct: 97  QALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS------VECSPSMV 150

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-------INPDVVTYNSVIRGFCYANDSNEA 114
            Y T++DGL + G +++A  L  +M D+         +P+V+TY+ +I G C AN  ++A
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             L   M  +G  P+V+T+++++D LCK  K+  A ++L  M+  G  PN   YN+L+ G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C   RV+ A  L   M   GC  NV +Y  LI+G CK   ++ A ++ ++M+ KG  P 
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           ++ YN L  GL +  QV+ +  L       G+  D   Y + I GLC++  + EA  L  
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  D+  YS LIDGLCK+G++  A++L+  +      ADVVTY+ +I  LC  G
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++D+AH L   M   G  P  + +N+L+ G    N   + +EL+  M+  N
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 501



 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 219/407 (53%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F ++++    PNV   S LI+GLC+   +I AL  F  M  G+G        D V
Sbjct: 27  QAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM-QGSGIVA-----DTV 80

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT ++ GL KE  +D+A  +L +M+D    P+VVTYNS+I G C  N+ + A+ LF  M
Sbjct: 81  IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-------GVRPNAFVYNTLMDG 174
                 P++VT++ ++D L + GK+E A  L + M+            PN   Y+ L+DG
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C   RV++A EL  SM++ GC  +V +Y+IL++G CK  ++  A  +  EML  G  P 
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +VTYN+L  GL    +V  A  L  +M   G   +   Y T IDGLCK G + +A  +  
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+  Y+ LI+GLCK+ ++  +  L      G +  DVVTY+ +I+ LC   
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++D+A  L L ++++G  PD + ++TL+ G  +  +  +  +L   M
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 36/399 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  L   +KA GC P+VITY+ L++GLC+      A  +  EM++      +V      
Sbjct: 209 QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLL 268

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C P+ V Y T+IDGLCK G V  A  +L  M DK   
Sbjct: 269 HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT 328

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD++ YN +I G C A+  +E+  L    +  G++P+VVT+S ++  LC++ +++EA +L
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G  P+  +Y+TL+DG C  G+V+ A +L+  M   GC  +V +YS LI+G CK
Sbjct: 389 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCK 448

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A  L + M+  G  P+ +TYN+L  GL +++ ++ A +L +EM+R   A     
Sbjct: 449 AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 508

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKC------ELDIRSYSCLIDGLCKSGRLKIAWE 326
           Y   I G+C+   +  A+ L    +  +C       LD  +YS LIDGLCK+GR+  A +
Sbjct: 509 YNILIHGMCRMERVDSAVVLLEQAKA-RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            F  +    +I D +TY+I++  L     + +   L LD
Sbjct: 568 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 210/424 (49%), Gaps = 46/424 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNVITYS LI+GLC+      A+ L E M    G     C PD + YT ++DGLCKE 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESM-KARG-----CSPDVITYTILVDGLCKES 240

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V  A E+L +M D    P++VTYNS++ G C A   ++A  L  +M  +G  PNVVT+ 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC------------------ 176
            ++D LCK G++++A  +L  MI  G  P+  +YN L++G C                  
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 177 -----------------LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                             + R++ A  L + ++S GC  +V  YS LI+G CK  +++ A
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             LY  M   G    VVTY+TL  GL +  +V+ A  L   M R G    T  Y + I G
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-----LPRG 334
           LC   ++ EA+EL   +    C     +Y+ LI G+C+  R+  A  L        +  G
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               D + Y+ +I  LC  G++ +A D F +M   GV PD + ++ L+ G  ++ +  ++
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 600

Query: 395 VELL 398
             L+
Sbjct: 601 RHLV 604



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 189/353 (53%), Gaps = 7/353 (1%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C+PD   Y  ++ G C+ G +D+A+    +M+ KN+ P+V   + +I G C A  S +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            R F  M   G+  + V ++ ++  L K  ++++A  +L  M   G  PN   YN+L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----- 229
            C     +RA+ELF  M+S+ C  ++ +Y+ L++G  +  ++E A++L+ EML +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 230 --GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                P V+TY+ L  GL + ++V +A +L + M+  G + D   Y   +DGLCK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            A E+ R +    C  ++ +Y+ L+ GLC++ R+  A  L   +       +VVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
             LC  G++  A  +  DM  KG  PD + +N L+ G  + ++  + + LL R
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 356



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 170/317 (53%), Gaps = 7/317 (2%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PDV TY +++RGFC   + ++A+R F EM  + + PNV   S+++D LCK  +  +A +
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
               M   G+  +  +Y  L+ G     R+++A  +   M   GC+ NV +Y+ LI+G C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM---QRHGV-- 266
           KN E + A  L+  M S    P++VTYNTL  GLF   ++ERA  LF EM   + H +  
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 267 --AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
             + +   Y   IDGLCK   + +A+EL  +++   C  D+ +Y+ L+DGLCK  ++  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           WE+   +     + ++VTYN ++H LC   ++  A  L  DM  +G  P+ V + TL+ G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 385 CIRNNETSKVVELLHRM 401
             +         +L  M
Sbjct: 306 LCKVGRVKDACAMLADM 322



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%)

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P V TY  L  G     ++++A + FDEM+   +  + +     IDGLCK    ++AL 
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
            FR ++      D   Y+ L+ GL K  RL  A  + H +       +VVTYN +I  LC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + + D+A +LF  M++   +P  V +NTL+ G  R  +  + + L   M +R
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++   C P+ +TY+ LI+G+CR      A+ L E+        G     D +
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGT-ALDTI 547

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGLCK G V +A +   +M D  + PD +TY+ ++ G   + D +E + L ++ 
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQ 607

Query: 122 MDQ 124
           M Q
Sbjct: 608 MVQ 610



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 47/101 (46%)

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D+ +Y+ L+ G C+ G +  A   F  +    L+ +V   +I+I  LC   +   A 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             F  M+  G+  D V +  L+ G  +     + + +LH M
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEM 105


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/386 (38%), Positives = 220/386 (56%), Gaps = 8/386 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           I+Y TLINGLC+ G T  A+ L   +   +       KPD V+Y  IID LCK   V +A
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             L  +M  K I P+VVTY ++I GFC      EA  L  EM  + + P+V TFS+++D 
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L K GKM+ A  +L +M++  V+P+   YN+L+DG+ L   V  AK +F SM   G    
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V SY+I+I+G CK K ++ A+SL+ EM  K + P  +T+N+L  GL +  ++   + L D
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M+     AD   Y + ID LCKN ++ +A+ LF+ +   + + D+ +Y+ LIDGLCK G
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 320 RLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           RLKIA E+F H L +G  + D+ TY +MI   C  G  D+A  L   ME  G  P+ + F
Sbjct: 469 RLKIAQEVFQHLLIKGYHL-DIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           + ++      +E  K  +LL  M  R
Sbjct: 528 DIIICALFEKDENDKAEKLLREMIAR 553



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 190/404 (47%), Gaps = 76/404 (18%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   L+    +P+V+ Y+ +I+ LC+      A NL+ EM N    +     P+ V 
Sbjct: 193 AIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM-NAKQIY-----PNVVT 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNIN------------------------------ 92
           YTT+I G C  G + +A  LL +MK KNIN                              
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 93  -----PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                PDVVTYNS++ G+   N+   AK +F  M   GV P V ++++++D LCK   ++
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  L E M    V PN   +N+L+DG C +GR+    +L   M       +V +YS LI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CKN  ++ A++L+ +M+++ I+P + TY  L                          
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTIL-------------------------- 460

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                    IDGLCK G +  A E+F+ L I    LDIR+Y+ +I G CK+G    A  L
Sbjct: 461 ---------IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
              +     I + +T++I+I AL    + DKA  L  +M A+G+
Sbjct: 512 LSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 177/348 (50%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L K      A  L   +  K I  D+VT N +I  FC+      +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              ++ +G  P+V+T + ++  LC  G++++A +  + ++ +  + +   Y TL++G C 
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A +L  ++E    K +V  Y+I+I+  CKNK +  A +LYSEM +K I P VVT
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G   +  +  A  L +EM+   +  D + +   ID L K G +  A  +   + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ +Y+ L+DG      +K A  +F+S+ +  +   V +Y IMI  LC    +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A  LF +M+ K V P+ + FN+L+ G  ++   + V +L+ +M +R+
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 186/399 (46%), Gaps = 41/399 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   L   G   +++T + LIN  C  G   ++ ++   ++           PD + 
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYH------PDVIT 141

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            TT+I GLC  G V KA +    +       D ++Y ++I G C   ++  A +L   + 
Sbjct: 142 LTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLE 201

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P+VV +++I+D LCKN  + EA  L   M    + PN   Y TL+ GFC+ G + 
Sbjct: 202 ERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLI 261

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M+      +V+++SILI+   K  +++ A  + + M+   +KP VVTYN+L 
Sbjct: 262 EAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLV 321

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F +++V+ A  +F+ M + GV                                    
Sbjct: 322 DGYFLVNEVKHAKYVFNSMAQSGVTPG--------------------------------- 348

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             ++SY+ +IDGLCK+  +  A  LF  +    +I + +T+N +I  LC  G++    DL
Sbjct: 349 --VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDL 406

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M  +    D + +++L+    +N    + + L  +M
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKM 445



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 33/297 (11%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-------------- 46
           +EA AL  ++K     P+V T+S LI+ L + G    A  +   M+              
Sbjct: 261 IEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 47  -----------------NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                            N   + GV   P    YT +IDGLCK   VD+A  L  +MK K
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVT--PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHK 378

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N+ P+ +T+NS+I G C +        L  +M D+    +V+T+S ++D LCKN  +++A
Sbjct: 379 NVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQA 438

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             L + MI   ++P+ + Y  L+DG C  GR+  A+E+F  +   G   ++ +Y+++I+G
Sbjct: 439 IALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISG 498

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +CK    + AL+L S+M   G  P  +T++ +   LFE  + ++A KL  EM   G+
Sbjct: 499 FCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 138/295 (46%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           ND N+A  LF  M+     P    F+ I+  L K  +   A  L + +   G+  +    
Sbjct: 48  NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTL 107

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC  G++  +  +  ++   G   +V + + LI G C   E++ AL  + ++++
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
              +   ++Y TL  GL +I + + A +L   ++   +  D   Y   ID LCKN  + E
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  L+  +   +   ++ +Y+ LI G C  G L  A  L + +    +  DV T++I+I 
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           AL  +GKM  A  +   M    V PD V +N+L+ G    NE      + + M +
Sbjct: 288 ALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQ 342



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 70/152 (46%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF+ M        T+ +   +  L K      A+ L + L       D+ + + LI+
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             C  G++ +++ +  ++ +     DV+T   +I  LC  G++ KA     D+ A     
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D +++ TL+ G  +  ET   ++L+  ++ER+
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERS 204


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/403 (35%), Positives = 222/403 (55%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   ++      +V TY  LINGLC+TG T+ A+    +M   N       KP+ V
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN------WKPNVV 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TI+DGLCK+G V +A  L  +M  K + P++VTY  +I+G C      EA  L  EM
Sbjct: 219 VYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEM 278

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G++P++   ++++D  CK GK+ +A  ++  MI  G  P+ F YN+L+  +CL  ++
Sbjct: 279 MKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKM 338

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  +F  M S G   ++  ++ LI+G+CK+K I  A+ L  EM   G  P V T+ TL
Sbjct: 339 NEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTL 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +   A +LF  M ++G   +       +DGLCK   + EA+ L + +     
Sbjct: 399 IGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNL 458

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I  YS L+DG+C +G+L  AWELF SLP   L  +V  Y IMI  LC  G +DKA D
Sbjct: 459 DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAED 518

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L ++ME  G  P+   +N  + G +   E ++ ++ L  M ++
Sbjct: 519 LLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 144/283 (50%), Gaps = 6/283 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A ++   +   G  P+V TY++LI+  C       A+ +F  M++  G       PD 
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVS-RGRL-----PDI 357

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V++T++I G CK+  ++KA  LL +M      PDV T+ ++I GFC A     AK LF+ 
Sbjct: 358 VVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLN 417

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ T +VI+D LCK   + EA  L + M +  +  N  +Y+ L+DG C  G+
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A ELF S+   G + NV+ Y+I+I G CK   ++ A  L   M   G  P   TYN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 45/330 (13%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYN----SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +D+A +L   M      P V  +     +++R   Y    +  K +F  +   G++ + +
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSL---GIEADTI 113

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T +++++ LC+   +     +L  M ++G+ P      TL++G C+ G V +A  L   M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM 173

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E M    +V++Y +LING CK  +   A+    +M  +  KP VV Y+T+          
Sbjct: 174 EKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTI---------- 223

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
                                    +DGLCK+G + EAL L   +       ++ +Y+CL
Sbjct: 224 -------------------------MDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACL 258

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I GLC  GR K A  L   + +  +  D+   NI++ A C +GK+ +A  +   M   G 
Sbjct: 259 IQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGE 318

Query: 372 APDCVAFNTLM-LGCIRN--NETSKVVELL 398
            PD   +N+L+ + C++N  NE  +V  L+
Sbjct: 319 GPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 1/194 (0%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADT 270
           K K I+ AL L+  M      P+V  +  L   +  +     A  L   M    G+ ADT
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                 I+ LC+   +     +  T+  L  E  + + + LI+GLC  G +  A  L   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +     DV TY ++I+ LC  G    A      ME +   P+ V ++T+M G  ++  
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 391 TSKVVELLHRMDER 404
            S+ + L   M+ +
Sbjct: 233 VSEALNLCSEMNGK 246


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/404 (35%), Positives = 231/404 (57%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L   + A G  PN   ++   +   + G    A+++F +M     + G+   PDAV
Sbjct: 13  EMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKM----RQHGL--SPDAV 66

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G VD A+    QM ++ + P++V ++S++ G C  +   + + LF EM
Sbjct: 67  SYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEM 126

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+ PN+V F+ I+  LCK G++ E  +L++ +  +GVRP+   YNTL+DG CL G +
Sbjct: 127 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 186

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M S+G K N FSY+ L++GYCK   I+ A SL+ +MLS GI P VVTYNT+
Sbjct: 187 DEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +   A +L+  M   G     + Y T ++GLCK+  + EA ++F++L     
Sbjct: 247 LHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I +++ +I  L K GR + A +LF ++P   L+ DVVTY ++   L  +G +++   
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  ME  G AP+    N L+   +   + S+    L ++DERN
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 410



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 173/373 (46%), Gaps = 35/373 (9%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G   +G + +  +LL  M    I+P+   +N     +      ++A  +F +M   G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+ V++  ++D LCK G++++A      MI  GV PN  V+++L+ G C   +  + +
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M ++G   N+  ++ ++   CK   +     L   +   G++P V++YNTL  G 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--------- 296
                ++ A KL + M   G+  ++++Y T + G CK G I  A  LFR +         
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240

Query: 297 ----RILK----------------------CELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                IL                        +  I +Y+ +++GLCKS  +  A+++F S
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L    L  +++T+ IMI AL   G+ + A DLF  + A G+ PD V +  +    I    
Sbjct: 301 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGS 360

Query: 391 TSKVVELLHRMDE 403
             +   L   M++
Sbjct: 361 LEEFDSLFSAMEK 373



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 6/299 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME   L   ++  G  P+VI+Y+TLI+G C  G    A  L E M++      V  KP++
Sbjct: 152 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS------VGLKPNS 205

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G CK G +D A  L  +M    I P VVTYN+++ G       +EAK L++ 
Sbjct: 206 FSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 265

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G +  + T++ I++ LCK+  ++EA ++ + +   G++ N   +  ++      GR
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 325

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     +   +E   SL+S M   G  P     N 
Sbjct: 326 KEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 385

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L   L     + RA     ++     + +       I     + Y   A  L +  RIL
Sbjct: 386 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 444


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 145/399 (36%), Positives = 224/399 (56%), Gaps = 9/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PN +TY+TL+N L   G +  A +L E+M   NG     C P+ + +  
Sbjct: 123 LLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA-ANG-----CPPELITFGL 176

Query: 66  IIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           II GLCKEG ++ A  ++ +M   +  ++PDV+T+NSV+ G C      +A  +F   ++
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G +PNVVT+S ++D L K  KM+EA QLL  M+++G R N   Y+T++DG    GR+  
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  +   M   GC  +  +Y+ LI+G+ K + +  A+ L  EML  G  P+VVTY TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RILKCE 302
           GL    + + A ++ D M   G A +   Y + +DGLCK G + EAL  F  + R     
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +YS LIDGLCK+G++  A+E    + R   I DVVT++I+I+ LC  G++D   +L
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M  +G  PD V + TL+    R +   +  +L  +M
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515



 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 224/442 (50%), Gaps = 43/442 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF + +A GC P V+TY+T+I+GLC+ G    AL L+++M      FG   +P  V
Sbjct: 48  EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAI---HFGF--RPTVV 102

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS--------------------- 100
            Y+T+IDGLC++  VDK  +LL +M  +   P+ VTYN+                     
Sbjct: 103 TYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQM 162

Query: 101 --------------VIRGFCYANDSNEAKRLFIE--MMDQGVQPNVVTFSVIMDELCKNG 144
                         +I+G C   +   A R+  E  M++ G+ P+V+TF+ ++D LCK  
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ 222

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++ +A  + +  ++ G RPN   Y+TL+DG     +++ A +L   M  +GC+ N  +YS
Sbjct: 223 RILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 282

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +++G  K   +E A+ +  +M   G  P  VTYNTL  G F+  ++  A  L  EM   
Sbjct: 283 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G       Y T   GLC++G   EA+E+   +    C  +  +YS ++DGLCK+GR+  A
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402

Query: 325 WELFHSLPRGVLIAD-VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
              F  + R  ++A  V+ Y+ +I  LC  GK+D+A++    M   G  PD V F+ L+ 
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G          +EL   M ER 
Sbjct: 463 GLCDAGRIDTGLELFRGMAERG 484



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 196/384 (51%), Gaps = 9/384 (2%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           +I+GLC++     A+ LF++M++          PD V Y  +IDGL K+  V +A +L  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDK------AIYPDVVTYGALIDGLGKQRRVKEAYDLFE 54

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKN 143
           + + K  +P VVTYN++I G C       A  L+ +M    G +P VVT+S ++D LC++
Sbjct: 55  EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRD 114

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            ++++  +LLE M   G  PNA  YNTL++     GR   A  L   M + GC   + ++
Sbjct: 115 HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITF 174

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            ++I G CK  EIE A  +  EM  +  G+ P V+T+N++  GL +  ++  A  +F   
Sbjct: 175 GLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 234

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G   +   Y T IDGL K   + EAL+L   +  L C  +  +YS ++DGL K GR+
Sbjct: 235 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 294

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A  +   +     + D VTYN +I       ++ +A  L  +M   G  P  V + TL
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
             G  R+    + VE+L  M  R 
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARG 378



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 175/322 (54%), Gaps = 9/322 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +F +    GC PNV+TYSTLI+GL +      AL L  +M+    E G  C+ + 
Sbjct: 225 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELG--CRANT 278

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++DGL K G ++ A  +L QM+D    PD VTYN++I GF       EA  L  E
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+VVT++ +   LC++G+ +EA ++L+ M   G  PNA  Y++++DG C  GR
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398

Query: 181 VNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           V  A   F  M  + +   H V +YS LI+G CK  +I+ A      M+  G  P VVT+
Sbjct: 399 VTEALGYFEKMARDEVVAPH-VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           + L  GL +  +++   +LF  M   G   D   Y T +D LC+   + EA +LF+ +R 
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517

Query: 299 LKCELDIRSYSCLIDGLCKSGR 320
                D  +   +I GL +  R
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNR 539



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 145/260 (55%), Gaps = 7/260 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  GC P+ +TY+TLI+G  +      A+ L  EM+           P  V
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG------FHPSVV 349

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+  GLC+ G  D+A E+L  M  +   P+ +TY+S++ G C A    EA   F +M
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D+ V P+V+ +S ++D LCK GK++EA + LE MI+ G  P+   ++ L++G C  GR
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 469

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++   ELF  M   GC  ++ +Y+ L++  C+   ++ A  L+ +M S G+ P   T  T
Sbjct: 470 IDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRT 529

Query: 241 LFIGLFEIHQVERAFKLFDE 260
           +  GL E+++ E A ++ DE
Sbjct: 530 MIHGLLEVNRDEDAKRIQDE 549


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 225/395 (56%), Gaps = 7/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L++ GC+PNV+TY+ LI    R      A+ L EEM     E G  C P+ V Y  ++D 
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM----RERG--CPPNLVTYNVLVDA 101

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK   V  A++++ +M +    P+V+T+NS++ GFC   + ++A++L   M+ +G++PN
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 161

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVT+S ++D LCK+ K  EA ++LE M   GV P+AF Y+ L+ G C   ++  A+++  
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC  +V  YS +I+ +CK+ ++  A     EM  +   P VVTYNT+  GL ++ 
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 250 QVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
           ++  A  + D+MQ  G V  D   Y T I+GLCK+  +VEA +L   +    C  D+ +Y
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +IDGLCK GRL+ A  L   + R     +VVTY  +I  LC   K+D+A  +  +M  
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G  P+ V +NT++ G   +    +  +L+ RM +
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 436



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 219/403 (54%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  GC PN++TY+ L++ LC+      A ++ ++MI G   F     P+ +
Sbjct: 75  EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG--FA----PNVM 128

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +++DG CK G VD A++LL  M  K + P+VVTY+++I G C +    EAK +  EM
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+  T+S ++  LCK  K+EEA Q+L  M   G  P+  VY++++  FC +G++
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNT 240
             A++    M       +V +Y+ +I+G CK  +I  A  +  +M   G + P VVTY+T
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +   +  A KL D M + G   D   Y T IDGLCK G + EA  L + ++   
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ +Y+ LI GLCK+ ++  A  +   +       ++VTYN M++ LC  G++ +A 
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428

Query: 361 DLFLDME--AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M+      +PD   + T++   + ++   +  +LL +M
Sbjct: 429 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 199/375 (53%), Gaps = 13/375 (3%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           C  G    AL L EEM +    F     PDA  +T II  +   G +D A + L  M   
Sbjct: 1   CNAGDLHAALELLEEMKSAG--FA----PDAFTHTPIITAMANAGDLDGAMDHLRSM--- 51

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
             +P+VVTY ++I  F  A    EA +L  EM ++G  PN+VT++V++D LCK   +  A
Sbjct: 52  GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 111

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +++ MI+ G  PN   +N+L+DGFC  G V+ A++L   M + G + NV +YS LI+G
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK+++   A  +  EM + G+ P   TY+ L  GL +  ++E A ++   M   G   D
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y + I   CK+G ++EA +  + +R  +   D+ +Y+ +IDGLCK G++  A  +  
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 330 SLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG---C 385
            +   G ++ DVVTY+ +I+ LC    + +A  L   M   G  PD V + T++ G   C
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351

Query: 386 IRNNETSKVVELLHR 400
            R  E   +++ + R
Sbjct: 352 GRLEEAEYLLQGMKR 366



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 170/299 (56%), Gaps = 9/299 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++KA G  P+  TYS LI+GLC+      A  +   M  G+G     C PD 
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDV 232

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y++II   CK G + +A++ L +M+ +  +PDVVTYN+VI G C      EA+ +  +
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M + G V P+VVT+S +++ LCK+  + EA +LL+ M + G  P+   Y T++DG C  G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A+ L   M+  GC  NV +Y+ LI+G CK ++++ A  +  EM + G  P +VTYN
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412

Query: 240 TLFIGLFEIHQVERAFKLFDEMQ--RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+  GL    +++ A +L   M+  R   + D   YRT ++ L  +  + EA +L   +
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 3/298 (1%)

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C A D + A  L  EM   G  P+  T + I+  +   G ++ A   L  M   G  PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  L+  F    ++  A +L   M   GC  N+ +Y++L++  CK   +  A  +  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+  G  P V+T+N+L  G  +   V+ A KL   M   G+  +   Y   IDGLCK+  
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            +EA E+   ++      D  +YS LI GLCK+ +++ A ++   +       DVV Y+ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +IHA C  GK+ +A     +M  +  +PD V +NT++ G  +  + ++   +L +M E
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  267 bits (682), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+  T++ LI      G    A+ +F EM     + GV  KPD V Y T
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPDVVTYRT 447

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   YN +I+GFC      +AK L  E+M+ G
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  ++V FS I++ LCK G++ +A  + +L + +G+ P+A VY+ LMDG+CL G++ +A 
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 567

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP+ + Y+ +  GL
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+  +   A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I
Sbjct: 628 FQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 687

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +IDG+ ++ R++ A +LF S+ R  L+ +VVTY+IMI  L  +G +++A D+F  
Sbjct: 688 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSS 747

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  P+    N ++   ++ NE  +    L ++DERN
Sbjct: 748 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 787



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 214/390 (54%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+ Y+T+I+G  + G    A +LF+EM+    + G+   PD V Y +++  LCK  
Sbjct: 228 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYNSVVHALCKAR 281

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + P+  TYN++I G+       EA R+F EM    + P+VVT S
Sbjct: 282 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 341

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++M  LCK GK++EA  + + M   G  P+ F YN +++G+   G +    +LF  M   
Sbjct: 342 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   + +++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GVA D +AY   I G C +G +++A EL   +      LDI  +S +I+ 
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L  D V Y++++   C  GKM+KA  +F  M + G+ P+
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M +R
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQR 611



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 186/375 (49%), Gaps = 5/375 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G  + A+ LF    +   +   V  P +  Y  ++D   +    + A     Q+   
Sbjct: 96  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 153

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  +++  N ++ GFC A  ++EA  + +    + G  P+V ++S+++  LC  GK  +
Sbjct: 154 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 213

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 273

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++K + P   TYN L  G     Q + A ++F EM+RH +
Sbjct: 274 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ SY+ +++G    G L    +
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +    +  D  T+N++I A    G +DKA  +F +M   GV PD V + T++    
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 387 RNNETSKVVELLHRM 401
           R  +    +E  ++M
Sbjct: 454 RIGKMDDAMEKFNQM 468



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 547

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 548 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 607

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +S+I+D L + G+   A      M + G+  +   YN ++ G      
Sbjct: 608 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 667

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P VVTY+ 
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSI 727

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A
Sbjct: 728 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 119/225 (52%), Gaps = 6/225 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  + + G EPNV+ Y TL+NG C+ G     L+LF EM+    + G+  KP  +
Sbjct: 565 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML----QRGI--KPSTI 618

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ IIDGL + G    AK    +M +  I  D+ TYN V+RG       +EA  LF E+
Sbjct: 619 LYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ N++T + ++D + +  ++EEA  L   + +  + PN   Y+ ++      G V
Sbjct: 679 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLV 738

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
             A+++F SM++ GC+ N    + ++    K  EI  A +  S++
Sbjct: 739 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+A   + N+IT +T+I+G+ +T     A +LF  +            P+ V
Sbjct: 670 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR------LVPNVV 723

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I  L KEG V++A+++   M++    P+    N V+R     N+   A     ++
Sbjct: 724 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++      +T  +++D     G   E  + L
Sbjct: 784 DERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 52/204 (25%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVE--------------- 288
           E A  L DE+QR G          F+  L        C++G  +                
Sbjct: 59  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 118

Query: 289 ------------------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                                   AL  F  L      ++I   + L++G C++ R   A
Sbjct: 119 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 178

Query: 325 WE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNT 380
            + L H  P    + DV +Y+I++ +LC  GK  +A DL L M A+G A   P+ VA+NT
Sbjct: 179 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNT 237

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  +  + +K  +L   M +R
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQR 261


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 230/400 (57%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+  T++ LI      G    A+ +F EM     + GV  KPD V Y T
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPDVVTYRT 434

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   YN +I+GFC      +AK L  E+M+ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  ++V FS I++ LCK G++ +A  + +L + +G+ P+A VY+ LMDG+CL G++ +A 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP+ + Y+ +  GL
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+  +   A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I
Sbjct: 615 FQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +IDG+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  
Sbjct: 675 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  P+    N ++   ++ NE  +    L ++DERN
Sbjct: 735 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 214/390 (54%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+ Y+T+I+G  + G    A +LF+EM+    + G+   PD V Y +++  LCK  
Sbjct: 215 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYNSVVHALCKAR 268

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + P+  TYN++I G+       EA R+F EM    + P+VVT S
Sbjct: 269 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++M  LCK GK++EA  + + M   G  P+ F YN +++G+   G +    +LF  M   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   + +++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GVA D +AY   I G C +G +++A EL   +      LDI  +S +I+ 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L  D V Y++++   C  GKM+KA  +F  M + G+ P+
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M +R
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQR 598



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 186/375 (49%), Gaps = 5/375 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G  + A+ LF    +   +   V  P +  Y  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  +++  N ++ GFC A  ++EA  + +    + G  P+V ++S+++  LC  GK  +
Sbjct: 141 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 260

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++K + P   TYN L  G     Q + A ++F EM+RH +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ SY+ +++G    G L    +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +    +  D  T+N++I A    G +DKA  +F +M   GV PD V + T++    
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 387 RNNETSKVVELLHRM 401
           R  +    +E  ++M
Sbjct: 441 RIGKMDDAMEKFNQM 455



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 148/289 (51%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 534

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 594

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +S+I+D L + G+   A      M + G+  +   YN ++ G      
Sbjct: 595 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRC 654

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P+VVTY+ 
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 714

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 119/225 (52%), Gaps = 6/225 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  + + G EPNV+ Y TL+NG C+ G     L+LF EM+    + G+  KP  +
Sbjct: 552 KALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML----QRGI--KPSTI 605

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ IIDGL + G    AK    +M +  I  D+ TYN V+RG       +EA  LF E+
Sbjct: 606 LYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ N++T + ++D + +  ++EEA  L   + +  + P+   Y+ ++      G V
Sbjct: 666 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLV 725

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
             A+++F SM++ GC+ N    + ++    K  EI  A +  S++
Sbjct: 726 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+A   + N+IT +T+I+G+ +T     A +LF  +            P  V
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR------LVPSVV 710

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I  L KEG V++A+++   M++    P+    N V+R     N+   A     ++
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++      +T  +++D     G   E  + L
Sbjct: 771 DERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 52/204 (25%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVE--------------- 288
           E A  L DE+QR G          F+  L        C++G  +                
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 289 ------------------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                                   AL  F  L      ++I   + L++G C++ R   A
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 165

Query: 325 WE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNT 380
            + L H  P    + DV +Y+I++ +LC  GK  +A DL L M A+G A   P+ VA+NT
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNT 224

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  +  + +K  +L   M +R
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQR 248


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 223/403 (55%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G   + ++Y TLINGLC+ G T  AL L   +       G + + D V
Sbjct: 158 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVD------GKLVQLDVV 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID +CK+  V+ A +L  +M  + I+ ++VTY+++I GFC      +A  LF +M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V TF++++D  CK G+++EA   L +M++ G++P+   YN+LMDG+CL   V
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK +  +M   G    V SY+I+ING+CK K ++ A+ L+ EM  K I P V+TYN+L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A +L D M   G   D   Y + +D LCKN  + +A+ L   L+    
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LIDGLCK GRL+ A  +F  L        V TY +MI   C+ G  D+A  
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M+     PD + +  ++      +E  K  +LL  M  R
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITR 554



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 210/403 (52%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+ IT +T I G C  G    ALN  ++++       +    D V 
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV------ALGFHLDQVS 177

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK G    A ELL ++  K +  DVV Y+++I   C   + N+A  L+ EM+
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + +  N+VT+S ++   C  GK+++A  L   M    + P+ + +N L+D FC  GRV 
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK     M   G K ++ +Y+ L++GYC   E+  A S+ + M  +G+  TV +YN + 
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +I  V++A KLF EM    +  +   Y + IDGLCK+G I  ALEL   +     +
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +YS ++D LCK+  +  A  L   L    +  ++ TY I+I  LC  G+++ A ++
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI 477

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F D+  KG       +  ++ G   +    + + LL +M + +
Sbjct: 478 FEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 209/419 (49%), Gaps = 41/419 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A +LF  L      P  + +  ++  L ++ H    L+LF++M     E+  + KP+ 
Sbjct: 52  VDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKM-----EYRGI-KPNF 105

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+  C+ G +  A  +L ++      PD +T N+ I+GFC     ++A     +
Sbjct: 106 VNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDK 165

Query: 121 MMDQG-----------------------------------VQPNVVTFSVIMDELCKNGK 145
           ++  G                                   VQ +VV +S I+D +CK+  
Sbjct: 166 LVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKN 225

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           + +A  L   M+   +  N   Y+ L+ GFC+ G++  A  LF  M S     +V++++I
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++ +CK   ++ A +  + M+ +GIKP +VTYN+L  G   +++V  A  + + M   G
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V A   +Y   I+G CK   + +A++LF+ +   +   ++ +Y+ LIDGLCKSGR+  A 
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           EL   +       D++TY+ ++ ALC +  +DKA  L + ++ +G+ P+   +  L+ G
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 35/379 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++   +   G    V +Y+ +ING C+      A+ LF+EM +          P+ + 
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ------IFPNVIT 387

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++IDGLCK G +  A EL+  M D+   PD++TY+S++   C  +  ++A  L I++ 
Sbjct: 388 YNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLK 447

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           DQG++PN+ T+++++D LCK G++E+A  + E ++  G       Y  ++ GFC  G  +
Sbjct: 448 DQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFD 507

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M+   C  +  +Y I+I       E + A  L  EM+++G+  + + Y +  
Sbjct: 508 EALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWS 567

Query: 243 IGLF--EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +       H +          Q  G  A     R + D +     + +            
Sbjct: 568 LSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDK----------- 616

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+   S +I   C        W       +   I DV TY +MI   C+ G  D++ 
Sbjct: 617 ---DVECPSVIIYSTCD-------WS------KQGYILDVNTYTVMIQGFCSHGLFDESL 660

Query: 361 DLFLDMEAKGVAPDCVAFN 379
            L   ME  G  PD V ++
Sbjct: 661 ALLSKMEVNGCIPDAVTYD 679



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 147/296 (49%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           ND  +A  LF  ++ Q   P  + F  I+  L K+        L + M   G++PN   +
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC  G +  A  +   +  MG + +  + +  I G+C   +I  AL+ + ++++
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G     V+Y TL  GL ++ +   A +L   +    V  D   Y T ID +CK+  + +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L+  +   +   +I +YS LI G C  G+LK A  LF+ +    +  DV T+NI++ 
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A C +G++ +A +    M  +G+ PD V +N+LM G    NE +    +L+ M  R
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 98/194 (50%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+K     LSL+ +M  +GIKP  V +N L     ++  +  AF +  ++ + G   DT 
Sbjct: 82  KSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTI 141

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
              TFI G C  G I +AL     L  L   LD  SY  LI+GLCK G  + A EL   +
Sbjct: 142 TLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV 201

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
              ++  DVV Y+ +I ++C D  ++ A DL+ +M ++ ++ + V ++ L+ G     + 
Sbjct: 202 DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKL 261

Query: 392 SKVVELLHRMDERN 405
              + L ++M   N
Sbjct: 262 KDAIGLFNKMTSEN 275



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 81/192 (42%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N ++  A+SL++ +L +   P  + +  +   L +         LF +M+  G+  +   
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I+  C+ G I  A  +   +  +  E D  + +  I G C  G++  A      L 
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 D V+Y  +I+ LC  G+   A +L   ++ K V  D V ++T++    ++   +
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 393 KVVELLHRMDER 404
              +L   M  R
Sbjct: 228 DAFDLYSEMVSR 239


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 237/433 (54%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG----NGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G  +    L + M+ NG    +  F + +
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+ V Y T+ID LCK G VD A     QM D+ + 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++ Y S+I G C  +  ++A+ L +EM+D+G+  N + F+ I+D  CK G++ E+ +L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +Y  LINGYC+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + + G   +   
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I  L K GR+  A +LF +  
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY++M   L   G +++  DLFL ME  G + D    N+++   ++  + +
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 743

Query: 393 KVVELLHRMDERN 405
           +    L  +DE++
Sbjct: 744 RAGTYLFMIDEKH 756



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 218/459 (47%), Gaps = 67/459 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG--------EFGVVCK 57
           +  ++   GC P+V +Y+ L+ GLC    +  AL L   M +  G         +  V  
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 58  ------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                   PD V Y++II  LCK   +DKA E+L  M    + P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D +TYNS++ G+C +    EA     +M   GV+PNVVT+S +M+ LCKNG+  EA ++ 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTG---------------------------------- 179
           + M + G+ P+   Y TL+ G+   G                                  
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 180 -RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            +V++A  +F  M   G   NV  Y  +I+  CK+  ++ A+  + +M+ +G+ P ++ Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +L  GL    + ++A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI +Y+ LIDG C +G++  A +L  S+    +  D+VTY  +I+  C   +MD 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           A  LF +M + GV+P+ + +N ++ G      T+   EL
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 216/427 (50%), Gaps = 45/427 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   + IT++ L+ GLC    T  A+++    +    E G  C PD   Y  ++ GLC E
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPDVFSYNNLLKGLCDE 176

Query: 74  GFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
               +A ELL  M D       PDVV+YN+V+ GF    DS++A   + EM+D+G+ P+V
Sbjct: 177 NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDV 236

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT+S I+  LCK   M++A ++L  M++ GV P+   YN+++ G+C +G+   A      
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG------ 244
           M S G + NV +YS L+N  CKN     A  ++  M  +G++P + TY TL  G      
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 245 LFEIH-----------------------------QVERAFKLFDEMQRHGVAADTWAYRT 275
           L E+H                             +V++A  +F +M++HG+  +   Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL-FHSLPRG 334
            ID LCK+G + +A+  F  +       +I  Y+ LI GLC   +   A EL    L RG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           + + + + +N +I + C +G++ ++  LF  M   GV PD + +NTL+ GC    +  + 
Sbjct: 477 ICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535

Query: 395 VELLHRM 401
            +LL  M
Sbjct: 536 TKLLASM 542



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 216/461 (46%), Gaps = 76/461 (16%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T++NG  + G +  A + + EM+    + G++  PD V Y++II  L
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYSSIIAAL 246

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA E+L  M    + PD +TYNS++ G+C +    EA     +M   GV+PNV
Sbjct: 247 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 306

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG----------- 179
           VT+S +M+ LCKNG+  EA ++ + M + G+ P+   Y TL+ G+   G           
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366

Query: 180 ------------------------RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                                   +V++A  +F  M   G   NV  Y  +I+  CK+  
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF-------------------- 255
           ++ A+  + +M+ +G+ P ++ Y +L  GL    + ++A                     
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 256 ---------------KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                          KLFD M R GV  D   Y T IDG C  G + EA +L  ++  + 
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + DI +Y  LI+G C+  R+  A  LF  +    +  +++TYNI++  L    +   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L++ +   G   +   +N ++ G  +NN T + + +   +
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 209/437 (47%), Gaps = 41/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EPNV+TYS+L+N LC+ G +  A  +F+ M     E      PD  
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 342

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I PD   +N +I  +      ++A  +F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV +  ++D LCK+G +++A    E MI  G+ PN  VY +L+ G C   + 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP ++TYNTL
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   GV  D   Y T I+G C+   + +AL LF+ +     
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD-------- 353
             +I +Y+ ++ GL  + R   A EL+ S+ +     ++ TYNI++H LC +        
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 354 ---------------------------GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                                      G+MD+A DLF    A G+ PD   ++ +    I
Sbjct: 643 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 702

Query: 387 RNNETSKVVELLHRMDE 403
                 ++ +L   M+E
Sbjct: 703 EQGSLEELDDLFLSMEE 719



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 4/329 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I   C+ G +D     L  +  K    D +T+  +++G C    +++A  +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMD 173
            +  M + G  P+V +++ ++  LC   + +EA +LL +M      G  P+   YNT+++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF   G  ++A   +  M   G   +V +YS +I   CK + ++ A+ + + M+  G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             +TYN++  G     Q + A     +M+  GV  +   Y + ++ LCKNG   EA ++F
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            ++     E DI +Y  L+ G    G L     L   + R  +  D   +NI+I A    
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            K+D+A  +F  M   G+ P+ V + T++
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 39/283 (13%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P V T+++++   C+ G+++     L  +++ G R +A  +  L+ G C   R + A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPTVVTYNTL 241
           ++ +  M  +GC  +VFSY+ L+ G C     + AL L   M      G  P VV+YNT+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    ++A+  + EM   G+  D                                
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPD-------------------------------- 235

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +YS +I  LCK+  +  A E+ +++ +  ++ D +TYN ++H  C+ G+  +A  
Sbjct: 236 ---VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               M + GV P+ V +++LM    +N  +++  ++   M +R
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 232/443 (52%), Gaps = 46/443 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P+V +Y+ L+ GLC    +  AL L   M +  G       PD V Y T
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNT 206

Query: 66  IIDGLCKEGF--------VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           +++G  KEG         +DKA E+L  M    + PD +TYNS++ G+C +    EA   
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA---------------------------- 149
             +M   GV+PNVVT+S +M+ LCKNG+  EA                            
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 150 -------SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                   +L +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y  LINGYC+   ++ AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           + G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I  L K GR+ 
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +LF +     L+ DV TY++M   L   G +++  DLFL ME  G + D    N+++
Sbjct: 507 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 566

Query: 383 LGCIRNNETSKVVELLHRMDERN 405
              ++  + ++    L  +DE++
Sbjct: 567 RKLLQRGDITRAGTYLFMIDEKH 589



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 202/401 (50%), Gaps = 26/401 (6%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP----DAVIYTTIIDGLCK 72
           P V TY+ LI   CR G     L+L      G    G V K     DA+ +T ++ GLC 
Sbjct: 90  PTVHTYAILIGCCCRAGR----LDL------GFAALGNVVKKGFRVDAITFTPLLKGLCA 139

Query: 73  EGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ---GVQP 128
           +     A +++L+ M +    PDV +YN++++G C  N S EA  L   M D    G  P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 129 NVVTFSVIMDELCKNG--------KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +VV+++ +++   K G         M++A ++L  M++ GV P+   YN+++ G+C +G+
Sbjct: 200 DVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 259

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A      M S G + NV +YS L+N  CKN     A  ++  M  +G++P + TY T
Sbjct: 260 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 319

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +V  + KLFD M R GV  D   Y T IDG C  G + EA +L  ++  + 
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 379

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + DI +Y  LI+G C+  R+  A  LF  +    +  +++TYNI++  L    +   A 
Sbjct: 380 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 439

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L++ +   G   +   +N ++ G  +NN T + + +   +
Sbjct: 440 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 172/323 (53%), Gaps = 6/323 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EPNV+TYS+L+N LC+ G +  A  +F+ M     E      PD  
Sbjct: 262 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 315

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G CKEG V ++++L   M    + PD++TYN++I G C A   +EA +L   M
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++VT+  +++  C+  +M++A  L + M+  GV PN   YN ++ G   T R 
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 435

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKEL+VS+   G +  + +Y+I+++G CKN   + AL ++  +    ++    T+N +
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +++ A  LF     +G+  D   Y    + L + G + E  +LF ++    C
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA 324
             D R  + ++  L + G +  A
Sbjct: 556 SADSRMLNSIVRKLLQRGDITRA 578



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITY+TLI+G C  G    A  L   M++      V  KPD 
Sbjct: 331 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS------VGVKPDI 384

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G C+   +D A  L  +M    ++P+++TYN +++G  +   +  AK L++ 
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ AK+LF +  + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 564

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 565 IVRKLLQRGDITRA 578



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 149/339 (43%), Gaps = 51/339 (15%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG---VRPNAFVYN 169
           +A+ +F E++ +G   ++   +  + ++ ++      S+    M + G   V P    Y 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYA 96

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------- 222
            L+   C  GR++       ++   G + +  +++ L+ G C +K    A+ +       
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 223 ---------YSEML-----------------------SKGIKPTVVTYNTLFIGLFE--- 247
                    Y+ +L                         G  P VV+YNT+  G F+   
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 248 -----IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                   +++A ++ + M ++GV  D   Y + + G C +G   EA+   + +R    E
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +YS L++ LCK+GR   A ++F S+ +  L  D+ TY  ++   C +G++ ++  L
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M   GV PD + +NTL+ GC    +  +  +LL  M
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 4/157 (2%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL--KCELDIRSYS 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    + +Y+
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL-DMEA 368
            LI   C++GRL + +    ++ +     D +T+  ++  LCAD +   A D+ L  M  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM-DER 404
            G  PD  ++N L+ G    N + + +ELLH M D+R
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDR 193


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/403 (36%), Positives = 225/403 (55%), Gaps = 9/403 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCR--TGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           +L  ++ +FG  PN+ T   LIN  C    G    AL+LF++MI G G      +PD V 
Sbjct: 82  SLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMI-GEG-----FRPDVVT 135

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK G    A  LL  M  KN  P+V  YN++I   C      EA  LF EM+
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P++ T++ ++  LC   + +  + LL  M+   + P+   +NT++D  C  G+V 
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            A ++   M +  GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + P  VTY+TL
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM       +   YR  +D LCKN Y+ EA+ L + +     
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI+  +  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 435

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+  G   +   +NT+  G +RNNETS+ ++LL  M  R
Sbjct: 436 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 478



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 3/316 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC--KNGKMEEAS 150
           P  V +N ++         +    L  +M   G+ PN+ T  ++++  C    GK+ EA 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            L + MI  G RP+   Y TL++G C  G  + A  L  SM    C+ NVF+Y+ +I+  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK++++  A +L+SEM++KGI P + TYN+L   L  + + +    L +EM    +  D 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 271 WAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            ++ T +D LCK G + EA ++  + ++   C  ++ SY+ LI+G CK  R+  A  LF 
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + R  LI D VTY+ +IH LC   ++  A  LF +M A    P+ V +  L+    +N 
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 390 ETSKVVELLHRMDERN 405
             ++ + LL  ++  N
Sbjct: 359 YLAEAMALLKAIEGSN 374



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 152/283 (53%), Gaps = 5/283 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
             A L  ++      P+V++++T+++ LC+ G    A ++ ++MI   G     C P+ +
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGG-----CMPNVI 275

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+G CK   +DKA  L  +M  + + PD VTY+++I G C+     +A  LF EM
Sbjct: 276 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 335

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VT+ +++D LCKN  + EA  LL+ +    + P+  V N  +DG C  G +
Sbjct: 336 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 395

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF ++ S G + +V++YSI+ING C+   ++ A  L+ EM   G       YNT+
Sbjct: 396 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             G    ++  RA +L  EM   G +AD      F+  L  +G
Sbjct: 456 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   ++    +P++   +  I+G+CR G    A +LF  + +         +PD  
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVW 415

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLC+ G +D+A +L  +M +     +   YN++ RGF   N+++ A +L  EM
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + +G   +  T ++ +  L  +G  +   Q+L 
Sbjct: 476 VARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 221/373 (59%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A+    K+   G EP+++T+++L++G C       AL LF++++      G+  +P+ V
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV------GMGFRPNVV 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I  LCK   ++ A E+  QM D  I P+VVTYNS++ G C     ++A  L  +M
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+QPNV+TF+ ++D   K GK+ EA +L ++MIQ+ V P+ F Y  L++G C  GR+
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRL 308

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++F  MES G   N  +Y+ LI+G+CK+K +E    ++ EM  KG+    +TY  L
Sbjct: 309 DEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + + + A ++F++M       D   Y   +DGLC NGY+ +AL +F+ +R  + 
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +++I +Y+ +I G+CK G+++ A++LF SL    +  +V+TY  MI   C  G + +A  
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 362 LFLDMEAKGVAPD 374
           LF  M+  G  P+
Sbjct: 489 LFKKMKEDGFLPN 501



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 212/399 (53%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF +++  G  P + T + ++N +CR+     A     +M+    E      PD V +T
Sbjct: 103 SLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFE------PDLVTFT 156

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ G C    ++ A  L  Q+      P+VVTY ++I   C     N A  +F +M D 
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN 216

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PNVVT++ ++  LC+ G+  +A+ LL  M++ G++PN   +  L+D F   G++  A
Sbjct: 217 GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           KEL+  M  M    +VF+Y+ LING C    ++ A  ++  M S G  P  VTY TL  G
Sbjct: 277 KELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHG 336

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +VE   K+F EM + G+ A+T  Y   I G C  G    A E+F  +   +   D
Sbjct: 337 FCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+Y+ L+DGLC +G ++ A  +F  + +  +  ++VTY I+I  +C  GK++ A DLF 
Sbjct: 397 IRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFC 456

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + +KG+ P+ + + T++ G  R     +   L  +M E
Sbjct: 457 SLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+LF  M++          P  V +T ++  + K    D    L  QM+   I+P + T
Sbjct: 66  ALDLFTRMVHSRP------LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N V+   C ++    A     +MM  G +P++VTF+ ++   C   ++E+A  L + ++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G RPN   Y TL+   C    +N A E+F  M   G + NV +Y+ L++G C+     
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ +GI+P V+T+  L     ++ ++  A +L+  M +  V  D + Y   I
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC  G + EA ++F  +       +  +Y+ LI G CKS R++   ++F+ + +  L+
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           A+ +TY ++I   C  G+ D A ++F  M ++   PD   +N L+ G   N    K + +
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419

Query: 398 LHRMDER 404
              M +R
Sbjct: 420 FKYMRKR 426



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 168/328 (51%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A +L  +M      P +V +  ++         +    LF +M   G+ P + T +++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M+ +C++ +   AS  L  M+++G  P+   + +L+ GFC   R+  A  LF  +  MG 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + NV +Y+ LI+  CKN+ +  A+ ++++M   GI+P VVTYN+L  GL EI +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M + G+  +   +   ID   K G I+EA EL++ +  +    D+ +Y+ LI+GLC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             GRL  A ++F+ +       + VTY  +IH  C   +++    +F +M  KG+  + +
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  L+ G           E+ ++M  R
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSR 391



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 159/307 (51%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   +    NEA  LF  M+     P++V F+ ++  + K  + +    L E M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+ P  +  N +M+  C + +  RA      M  +G + ++ +++ L++G+C    IE
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL+L+ +++  G +P VVTY TL   L +   +  A ++F++M  +G+  +   Y + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            GLC+ G   +A  L R +     + ++ +++ LID   K G++  A EL+  + +  + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV TY  +I+ LC  G++D+A  +F  ME+ G  P+ V + TL+ G  ++       ++
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 398 LHRMDER 404
            + M ++
Sbjct: 350 FYEMSQK 356



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 126/233 (54%), Gaps = 6/233 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L+  +      P+V TY+ LINGLC  G    A  +F  ++  NG +     P+ 
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMF-YLMESNGYY-----PNE 327

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YTT+I G CK   V+   ++  +M  K +  + +TY  +I+G+C     + A+ +F +
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P++ T++V++D LC NG +E+A  + + M +  +  N   Y  ++ G C  G+
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           V  A +LF S+ S G K NV +Y+ +I+G+C+   I  A +L+ +M   G  P
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   +F ++   G   N ITY+ LI G C  G   VA  +F +M +          PD  
Sbjct: 345 DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP------PDIR 398

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLC  G+V+KA  +   M+ + ++ ++VTY  +I+G C      +A  LF  +
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL 458

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
             +G++PNV+T++ ++   C+ G + EA  L + M + G  PN  V
Sbjct: 459 FSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 146/403 (36%), Positives = 216/403 (53%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      LK  G E +  T   +INGLC+ GH+  AL+  ++M   N      C  D  
Sbjct: 114 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVT 167

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++DGLCK+G V +A +L  QM  K I P++ TYN +I G C  +   EA  L   M
Sbjct: 168 AYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+V TF+VI     K G +  A  +   M  +G+  N   YN+++   C+  ++
Sbjct: 228 MRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQM 287

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M   GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ P VVT++TL
Sbjct: 288 KDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTL 347

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +   A +LF  M +HG   D       +DGL K  +  EA+ LFR L  +  
Sbjct: 348 IGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNS 407

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  YS +++G+C SG+L  A ELF  L    +  DVVTYNIMI+ LC +G +D A D
Sbjct: 408 DLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAED 467

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L + ME  G  PD   +N  + G +R  E SK  + L  M  +
Sbjct: 468 LLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGK 510



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 211/390 (54%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP+++T++T++NGLC  G+   A+   + + +   E       D      II+GLCK 
Sbjct: 91  GVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYE------SDRYTRGAIINGLCKV 144

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A   L +M+++N N DV  Y++V+ G C      EA  LF +M  +G+QPN+ T+
Sbjct: 145 GHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTY 204

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC   + +EA+ LL  M++ G+ P+   +N +   F  TG ++RAK +F  M  
Sbjct: 205 NCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGH 264

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           MG +HNV +Y+ +I  +C   +++ A+ ++  M+ KG  P +VTYN+L  G  E   + +
Sbjct: 265 MGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNK 324

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A     EM  +G+  D   + T I G CK G  V A ELF  +       D+++ + ++D
Sbjct: 325 AMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILD 384

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K      A  LF  L +     D++ Y+I+++ +C+ GK++ A +LF  + +KGV  
Sbjct: 385 GLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKI 444

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V +N ++ G  +        +LL +M+E
Sbjct: 445 DVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 174/371 (46%), Gaps = 15/371 (4%)

Query: 34  HTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           H +V +  F  + + N  FG+V K     YTT I              L+  M    + P
Sbjct: 15  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 59

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +V T+N VI   C  N +     +   M   GV+P++VTF+ I++ LC  G + +A + +
Sbjct: 60  NVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 119

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +  +G   + +    +++G C  G  + A      ME   C  +V +YS +++G CK+
Sbjct: 120 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKD 179

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +  AL L+S+M  KGI+P + TYN L  GL    + + A  L   M R G+  D   +
Sbjct: 180 GMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 239

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                   K G I  A  +F  +  +  E ++ +Y+ +I   C   ++K A E+F  + R
Sbjct: 240 NVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIR 299

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
              + ++VTYN +IH  C    M+KA     +M   G+ PD V ++TL+ G  +  +   
Sbjct: 300 KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVA 359

Query: 394 VVELLHRMDER 404
             EL   M + 
Sbjct: 360 AKELFFVMHKH 370



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 178/396 (44%), Gaps = 9/396 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K F C   V  ++ L   + +  H   A++L + M       GV  KP+   +  +I+ 
Sbjct: 20  MKPFPC---VKDFNLLFGIVAKMKHYTTAISLIKHM----SYIGV--KPNVSTHNIVINC 70

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC+         +L  M    + P +VT+ +++ G C   +  +A R    + D G + +
Sbjct: 71  LCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESD 130

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T   I++ LCK G    A   L+ M +     +   Y+ ++DG C  G V  A +LF 
Sbjct: 131 RYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFS 190

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G + N+F+Y+ LI+G C     + A  L + M+ KGI P V T+N +     +  
Sbjct: 191 QMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTG 250

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            + RA  +F  M   G+  +   Y + I   C    + +A+E+F  +    C  +I +Y+
Sbjct: 251 MISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYN 310

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI G C++  +  A      +    L  DVVT++ +I   C  GK   A +LF  M   
Sbjct: 311 SLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKH 370

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  PD      ++ G  + +  S+ + L   +++ N
Sbjct: 371 GQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 406



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 145/282 (51%), Gaps = 6/282 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A ++F+ +   G E NV+TY+++I   C       A+ +F+ MI         C P+ V
Sbjct: 254 RAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKG------CLPNIV 307

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G C+   ++KA   L +M +  ++PDVVT++++I GFC A     AK LF  M
Sbjct: 308 TYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVM 367

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P++ T ++I+D L K     EA  L   + ++    +  +Y+ +++G C +G++
Sbjct: 368 HKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKL 427

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ELF  + S G K +V +Y+I+ING CK   ++ A  L  +M   G  P   TYN  
Sbjct: 428 NDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVF 487

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             GL   +++ ++ K    M+  G  A+    +  I+    N
Sbjct: 488 VQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 529



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 111/202 (54%), Gaps = 6/202 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V+T+STLI G C+ G  + A  LF  M + +G+      PD      I+DGL K 
Sbjct: 336 GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVM-HKHGQL-----PDLQTCAIILDGLFKC 389

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            F  +A  L  +++  N + D++ Y+ ++ G C +   N+A  LF  +  +GV+ +VVT+
Sbjct: 390 HFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTY 449

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++ LCK G +++A  LL  M + G  P+   YN  + G      ++++ +  + M+ 
Sbjct: 450 NIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKG 509

Query: 194 MGCKHNVFSYSILINGYCKNKE 215
            G + N  +  +LIN +  NKE
Sbjct: 510 KGFRANATTTKLLINYFSANKE 531



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 35/223 (15%)

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K ++ AL  Y +M++    P V  +N LF  + ++     A  L   M   GV  +   +
Sbjct: 5   KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-- 331
              I+ LC+  + V    +   +  +  E  I +++ +++GLC  G +  A      L  
Sbjct: 65  NIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKD 124

Query: 332 --------PRGVLI-------------------------ADVVTYNIMIHALCADGKMDK 358
                    RG +I                          DV  Y+ ++  LC DG + +
Sbjct: 125 MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFE 184

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A DLF  M  KG+ P+   +N L+ G    +   +   LL  M
Sbjct: 185 ALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  265 bits (677), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 142/362 (39%), Positives = 211/362 (58%), Gaps = 6/362 (1%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +TY TLINGLC+ G T  A  L  +M       G V +P+ VIY  I+DGLCK+G V +A
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKME------GQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           ++L   +  + I+PDV TY  +I GFC      E  RL  +M+D+ V  NV T+++++D 
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK G + +A  +  LMI+ G RP+   +NTLM G+CL   V  A++LF +    G   +
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V+SY+ILI GYCKN  I+ ALSL+++M  K + P +VTY++L  GL +  ++  A++LF 
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            +   G + +   Y   +D LCK   + +A+ELF  +       ++ SY+ LI+G CKS 
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R+  A  LF  + R  L+ D VTYN +I  LC  G++  A +LF  M   G   D + +N
Sbjct: 478 RIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYN 537

Query: 380 TL 381
            L
Sbjct: 538 IL 539



 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 145/403 (35%), Positives = 214/403 (53%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  ++   G  P+++T S LIN  C  GH   A ++   ++    +       +A+ 
Sbjct: 97  AISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQL------NAIT 150

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            TTI+ GLC  G V KA E    +  +    D VTY ++I G C    + EA  L  +M 
Sbjct: 151 LTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKME 210

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            Q V+PNVV +++I+D LCK+G + EA  L   ++  G+ P+ F Y  L+ GFC  G+  
Sbjct: 211 GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWR 270

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L   M       NV++Y+ILI+  CK   +  A  + + M+ +G +P +VT+NTL 
Sbjct: 271 EVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLM 330

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V  A KLFD     G+  D W+Y   I G CKN  I EAL LF  +   K  
Sbjct: 331 SGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLA 390

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +YS LIDGLCKSGR+  AWELF ++  G    +V+TYNIM+ ALC    +DKA +L
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F  M  +G+ P+  ++N L+ G  ++    + + L   M  RN
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 211/390 (54%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + N IT +T++ GLC  G    AL  F + +   G        D V Y T+I+GLCK 
Sbjct: 143 GYQLNAITLTTIMKGLCINGEVRKALE-FHDSVVAQGFL-----LDEVTYGTLINGLCKI 196

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A ELL +M+ + + P+VV YN ++ G C      EA+ L+ +++ +G+ P+V T+
Sbjct: 197 GLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTY 256

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++   C  G+  E ++LL  M+   V  N + YN L+D  C  G + +A ++   M  
Sbjct: 257 TCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE 316

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + ++ +++ L++GYC   ++  A  L+      GI P V +YN L IG  + ++++ 
Sbjct: 317 RGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDE 376

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF++M    +A +   Y + IDGLCK+G I  A ELF  +       ++ +Y+ ++D
Sbjct: 377 ALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLD 436

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK   +  A ELF+ +    L  +V +YNI+I+  C   ++D+A +LF +M  + + P
Sbjct: 437 ALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVP 496

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V +N L+ G  ++   S   EL + M +
Sbjct: 497 DSVTYNCLIDGLCKSGRISHAWELFNVMHD 526



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 178/316 (56%), Gaps = 6/316 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L++ +   G +P+V TY+ LI+G C  G       L  +M++ N    V       
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYT----- 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK+G + KA ++   M ++   PD+VT+N+++ G+C  ND  EA++LF   
Sbjct: 291 -YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF 349

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V ++++++   CKN +++EA  L   M    + PN   Y++L+DG C +GR+
Sbjct: 350 AECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRI 409

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ELF ++   G   NV +Y+I+++  CK + ++ A+ L++ M  +G+ P V +YN L
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A  LF+EM R  +  D+  Y   IDGLCK+G I  A ELF  +     
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGP 529

Query: 302 ELDIRSYSCLIDGLCK 317
            +D+ +Y+ L D   K
Sbjct: 530 PVDVITYNILFDAFSK 545



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 2/335 (0%)

Query: 72  KEGF--VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           K GF  +D A  L  ++   +  P VV +N ++           A  L  +M  +G+ P+
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +VT S++++  C  G M  A  +L ++++ G + NA    T+M G C+ G V +A E   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           S+ + G   +  +Y  LING CK      A  L  +M  + ++P VV YN +  GL +  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V  A  L+ ++   G+  D + Y   I G C  G   E   L   +      L++ +Y+
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LID LCK G L  A ++ + +       D+VT+N ++   C    + +A  LF      
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ PD  ++N L++G  +NN   + + L ++M+ +
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYK 387



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 121/216 (56%), Gaps = 6/216 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF      G  P+V +Y+ LI G C+      AL+LF +M            P+ 
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK------LAPNI 393

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+++IDGLCK G +  A EL   + D   +P+V+TYN ++   C     ++A  LF  
Sbjct: 394 VTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNL 453

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ PNV +++++++  CK+ +++EA  L E M +  + P++  YN L+DG C +GR
Sbjct: 454 MFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGR 513

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ A ELF  M   G   +V +Y+IL + + K + +
Sbjct: 514 ISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 115/225 (51%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  LF  + +M    +V  +++++    K K    A+SL  +M  +GI P++VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L      +  +  AF +   + + G   +     T + GLC NG + +ALE   ++    
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             LD  +Y  LI+GLCK G  + A+EL H +   V+  +VV YN+++  LC DG + +A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL+ D+  +G+ PD   +  L+ G     +  +V  LL  M +RN
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 140/395 (35%), Positives = 225/395 (56%), Gaps = 7/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L++ GC+PNV+TY+ LI    R      A+ L EEM     E G  C P+ V Y  ++D 
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM----RERG--CPPNLVTYNVLVDA 223

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK   V  A++++ +M +    P+V+T+NS++ GFC   + ++A++L   M+ +G++PN
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVT+S ++D LCK+ K  EA ++LE M   GV P+AF Y+ L+ G C   ++  A+++  
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC  +V  YS +I+ +CK+ ++  A     EM  +   P VVTYNT+  GL ++ 
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403

Query: 250 QVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
           ++  A  + ++MQ  G V  D   Y T I+GLCK+  +VEA +L   +    C  D+ +Y
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 463

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +IDGLCK GRL+ A  L   + R     +VVTY  +I  LC   K+D+A  +  +M  
Sbjct: 464 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 523

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G  P+ V +NT++ G   +    +  +L+ RM +
Sbjct: 524 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 216/403 (53%), Gaps = 13/403 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF       CEP+V +Y+ +I+G C  G    AL L EEM +    F     PDA 
Sbjct: 95  EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAG--FA----PDAF 148

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T II  +   G +D A + L  M     +P+VVTY ++I  F  A    EA +L  EM
Sbjct: 149 THTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEM 205

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PN+VT++V++D LCK   +  A  +++ MI+ G  PN   +N+L+DGFC  G V
Sbjct: 206 RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 265

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L   M + G + NV +YS LI+G CK+++   A  +  EM ++G+ P   TY+ L
Sbjct: 266 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL 325

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++   M   G   D   Y + I   CK+G ++EA +  + +R  + 
Sbjct: 326 IHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 385

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAH 360
             D+ +Y+ +IDGLCK G++  A  +   +   G ++ DVVTY+ +I+ LC    + +A 
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 445

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG---CIRNNETSKVVELLHR 400
            L   M   G  PD V + T++ G   C R  E   +++ + R
Sbjct: 446 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 204/399 (51%), Gaps = 32/399 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  L  +++  GC PN++TY+ L++ LC+      A ++ ++MI G     V+      
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256

Query: 56  ---CK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                    P+ V Y+ +IDGLCK     +AKE+L +MK + + 
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVT 316

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  TY+++I G C A+   EA+++   M   G  P+VV +S I+   CK+GK+ EA + 
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYC 211
           L+ M +    P+   YNT++DG C  G++  A+ +   M+  G    +V +YS +ING C
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  +  A  L   M   G  P VVTY T+  GL +  ++E A  L   M+R G A +  
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y T I GLCK   + EA  +   +R   C  ++ +Y+ +++GLC SGR+K A +L   +
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556

Query: 332 P--RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
              R     D  TY  +++AL +   + +A  L   M++
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 170/300 (56%), Gaps = 9/300 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++K  G  P+  TYS LI+GLC+      A  +   M  G+G     C PD 
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDV 354

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y++II   CK G + +A++ L +M+ +  +PDVVTYN+VI G C      EA+ +  +
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQ 414

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M + G V P+VVT+S +++ LCK+  + EA +LL+ M + G  P+   Y T++DG C  G
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A+ L   M+  GC  NV +Y+ LI+G CK ++++ A  +  EM + G  P +VTYN
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534

Query: 240 TLFIGLFEIHQVERAFKLFDEMQ--RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           T+  GL    +++ A +L   M+  R   + D   YRT ++ L  +  + EA +L   ++
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 3/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV +YN VI GFC A D + A  L  EM   G  P+  T + I+  +   G ++ A   
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  PN   Y  L+  F    ++  A +L   M   GC  N+ +Y++L++  CK
Sbjct: 170 LRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  +  +M+  G  P V+T+N+L  G  +   V+ A KL   M   G+  +   
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   IDGLCK+   +EA E+   ++      D  +YS LI GLCK+ +++ A ++   + 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 DVV Y+ +IHA C  GK+ +A     +M  +  +PD V +NT++ G  +  + +
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 393 KVVELLHRMDE 403
           +   +L +M E
Sbjct: 407 EAQVILEQMQE 417



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 3/308 (0%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           ++NS+++         EA  LF   +    +P+V ++++++   C  G +  A +LLE M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G  P+AF +  ++      G ++ A +    + SMGC  NV +Y+ LI  + + K++
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A+ L  EM  +G  P +VTYN L   L ++  V  A  +  +M   G A +   + + 
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +DG CK G + +A +L   +       ++ +YS LIDGLCKS +   A E+   +    +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D  TY+ +IH LC   K+++A  +   M   G  PD V +++++    ++ +  +  +
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 397 LLHRMDER 404
            L  M ++
Sbjct: 376 TLQEMRKQ 383



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 7/230 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA     +++     P+V+TY+T+I+GLC+ G    A  + E+M     E G V  PD 
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM----QESGDVL-PDV 425

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+GLCK   + +A++LL +M     NPDVVTY ++I G C      EA+ L   
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNVVT++ ++  LCK  K++EA +++E M   G  PN   YNT+++G C++GR
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545

Query: 181 VNRAKELFVSMES--MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +  A++L   M+     C  +  +Y  ++N    +  ++ A  L  +M S
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 3/245 (1%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G    AF +N+L+       +   A +LF S     C+ +V SY+I+I+G+C   ++  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L L  EM S G  P   T+  +   +     ++ A    D ++  G   +   Y   I  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
             +   + EA++L   +R   C  ++ +Y+ L+D LCK   +  A ++   +  G    +
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           V+T+N ++   C  G +D A  L   M AKG+ P+ V ++ L+ G  ++ +  +  E+L 
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 400 RMDER 404
            M  R
Sbjct: 309 EMKTR 313


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 237/433 (54%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG----NGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G  +    L + M+ NG    +  F + +
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+ V Y T+ID LCK G VD A     QM D+ + 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++ Y S+I G C  +  ++A+ L +EM+D+G+  N + F+ I+D  CK G++ E+ +L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +Y  LINGYC+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + + G   +   
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I  L K GR+  A +LF +  
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY++M   L   G +++  DLFL ME  G + D    N+++   ++  + +
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDIT 743

Query: 393 KVVELLHRMDERN 405
           +    L  +DE++
Sbjct: 744 RAGTYLFMIDEKH 756



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 218/459 (47%), Gaps = 67/459 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG--------EFGVVCK 57
           +  ++   GC P+V +Y+ L+ GLC    +  AL L   M +  G         +  V  
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 58  ------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                   PD V Y++II  LCK   +DKA E+L  M    + P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D +TYNS++ G+C +    EA     +M   GV+PNVVT+S +M+ LCKNG+  EA ++ 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTG---------------------------------- 179
           + M + G+ P+   Y TL+ G+   G                                  
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 180 -RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            +V++A  +F  M   G   NV  Y  +I+  CK+  ++ A+  + +M+ +G+ P ++ Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +L  GL    + ++A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI +Y+ LIDG C +G++  A +L  S+    +  D+VTY  +I+  C   +MD 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           A  LF +M + GV+P+ + +N ++ G      T+   EL
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 216/427 (50%), Gaps = 45/427 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   + IT++ L+ GLC    T  A+++    +    E G  C PD   Y  ++ GLC E
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPDVFSYNNLLKGLCDE 176

Query: 74  GFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
               +A ELL  M D       PDVV+YN+V+ GF    DS++A   + EM+D+G+ P+V
Sbjct: 177 NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDV 236

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT+S I+  LCK   M++A ++L  M++ GV P+   YN+++ G+C +G+   A      
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG------ 244
           M S G + NV +YS L+N  CKN     A  ++  M  +G++P + TY TL  G      
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 245 LFEIH-----------------------------QVERAFKLFDEMQRHGVAADTWAYRT 275
           L E+H                             +V++A  +F +M++HG+  +   Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL-FHSLPRG 334
            ID LCK+G + +A+  F  +       +I  Y+ LI GLC   +   A EL    L RG
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           + + + + +N +I + C +G++ ++  LF  M   GV PD + +NTL+ GC    +  + 
Sbjct: 477 ICL-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535

Query: 395 VELLHRM 401
            +LL  M
Sbjct: 536 TKLLASM 542



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 216/461 (46%), Gaps = 76/461 (16%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T++NG  + G +  A + + EM+    + G++  PD V Y++II  L
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYSSIIAAL 246

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA E+L  M    + PD +TYNS++ G+C +    EA     +M   GV+PNV
Sbjct: 247 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 306

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG----------- 179
           VT+S +M+ LCKNG+  EA ++ + M + G+ P+   Y TL+ G+   G           
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366

Query: 180 ------------------------RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                                   +V++A  +F  M   G   NV  Y  +I+  CK+  
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF-------------------- 255
           ++ A+  + +M+ +G+ P ++ Y +L  GL    + ++A                     
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 256 ---------------KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                          KLFD M R GV  D   Y T IDG C  G + EA +L  ++  + 
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + DI +Y  LI+G C+  R+  A  LF  +    +  +++TYNI++  L    +   A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L++ +   G   +   +N ++ G  +NN T + + +   +
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 209/437 (47%), Gaps = 41/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EPNV+TYS+L+N LC+ G +  A  +F+ M     E      PD  
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 342

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I PD   +N +I  +      ++A  +F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV +  ++D LCK+G +++A    E MI  G+ PN  VY +L+ G C   + 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP ++TYNTL
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   GV  D   Y T I+G C+   + +AL LF+ +     
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD-------- 353
             +I +Y+ ++ GL  + R   A EL+ S+ +     ++ TYNI++H LC +        
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 354 ---------------------------GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                                      G+MD+A DLF    A G+ PD   ++ +    I
Sbjct: 643 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 702

Query: 387 RNNETSKVVELLHRMDE 403
                 ++ +L   M+E
Sbjct: 703 EQGSLEELDDLFLSMEE 719



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 4/329 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I   C+ G +D     L  +  K    D +T+  +++G C    +++A  +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMD 173
            +  M + G  P+V +++ ++  LC   + +EA +LL +M      G  P+   YNT+++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF   G  ++A   +  M   G   +V +YS +I   CK + ++ A+ + + M+  G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             +TYN++  G     Q + A     +M+  GV  +   Y + ++ LCKNG   EA ++F
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            ++     E DI +Y  L+ G    G L     L   + R  +  D   +NI+I A    
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            K+D+A  +F  M   G+ P+ V + T++
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 39/283 (13%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P V T+++++   C+ G+++     L  +++ G R +A  +  L+ G C   R + A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPTVVTYNTL 241
           ++ +  M  +GC  +VFSY+ L+ G C     + AL L   M      G  P VV+YNT+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    ++A+  + EM   G+  D                                
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPD-------------------------------- 235

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +YS +I  LCK+  +  A E+ +++ +  ++ D +TYN ++H  C+ G+  +A  
Sbjct: 236 ---VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               M + GV P+ V +++LM    +N  +++  ++   M +R
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/406 (35%), Positives = 235/406 (57%), Gaps = 13/406 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A++   KL   G EP++ T+++LING C       A+++  +M+    E G+  KPD VI
Sbjct: 125 ASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV----EMGI--KPDVVI 178

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTTIID LCK G VD A  L  QM++  I PDVV Y S++ G C +    +A  L   MM
Sbjct: 179 YTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM 238

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + ++P+V+TF+ ++D   K GK+ +A +L   MIQ+ + PN F Y +L++G C+ GR++
Sbjct: 239 KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLD 298

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++F  ME+ GC  +V +Y+ LING+CK K++E A+ ++ EM  KG+    +TY TL 
Sbjct: 299 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + +   A ++F  M   GV  +   Y   +  LC NG + +AL +F  ++  K E
Sbjct: 359 QGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ--KRE 416

Query: 303 LD-----IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +D     IR+Y+ L+ GLC +G+L+ A  +F  + +  +   ++TY I+I  +C  GK+ 
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF  + +KGV P+ V + T++ G  R     +   L  +M E
Sbjct: 477 DALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+LF  M+           P  + +T +++ + K    D    L   ++   ++ D+ T
Sbjct: 55  ALDLFSHMVESRP------LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N ++  FC ++    A     ++M  G +P++ TF+ +++  C   ++EEA  ++  M+
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G++P+  +Y T++D  C  G V+ A  LF  ME+ G + +V  Y+ L+NG C +    
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L   M+ + IKP V+T+N L     +  ++  A +L++EM +  +A + + Y + I
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC  G + EA ++F  +    C  D+ +Y+ LI+G CK  +++ A ++F+ + +  L 
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + +TY  +I      GK + A ++F  M ++GV P+   +N L+     N + +K + +
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 398 LHRMDER 404
              M +R
Sbjct: 409 FEDMQKR 415



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 170/307 (55%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   ++   NEA  LF  M++    P+++ F+ +++ + K  K +    L + + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +GV  + +  N LM+ FC + +   A      +  +G + ++F+++ LING+C    IE
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+S+ ++M+  GIKP VV Y T+   L +   V+ A  LF++M+ +G+  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +G   +A  L R +   K + D+ +++ LID   K G+L  A EL++ + +  + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++ TY  +I+ LC +G++D+A  +F  ME KG  PD VA+ +L+ G  +  +    +++
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 398 LHRMDER 404
            + M ++
Sbjct: 339 FYEMSQK 345



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 151/270 (55%), Gaps = 9/270 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L+ ++      PN+ TY++LINGLC  G    A  +F  M          C PD 
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG------CFPDV 316

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT++I+G CK   V+ A ++  +M  K +  + +TY ++I+GF      N A+ +F  
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M+ +GV PN+ T++V++  LC NGK+ +A  + E M +    GV PN   YN L+ G C 
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++ +A  +F  M+       + +Y+I+I G CK  +++ AL+L+  + SKG+KP VVT
Sbjct: 437 NGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVT 496

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           Y T+  GLF    +  A  LF +M+  GV+
Sbjct: 497 YTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 10/211 (4%)

Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           S  +  +C  +EI            AL L+S M+     P+++ +  L   + ++ + + 
Sbjct: 30  SFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDV 89

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              L   +Q  GV+ D +     ++  C++     A      L  L  E DI +++ LI+
Sbjct: 90  VINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLIN 149

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C   R++ A  + + +    +  DVV Y  +I +LC +G +D A  LF  ME  G+ P
Sbjct: 150 GFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V + +L+ G   +        LL  M +R
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKR 240


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 157/437 (35%), Positives = 230/437 (52%), Gaps = 37/437 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG----NGEFGVVC 56
           EA  +F  +   G +PNV  Y  L++G    G      +L + M+ NG    N  F +V 
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVL 451

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V Y  +ID LCK G VD A     QM +  + 
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+ V +NS++ G C  +   +A+ LF EM DQGV+PNVV F+ IM  LC  G++  A +L
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRL 571

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++ M ++GVRPN   YNTL+ G CL GR + A +L   M S+G K ++ SY  L+ GYCK
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  L+ EML KG+ P  VTY+T+  GLF   +   A +L+  M + G   D + 
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIR----SYSCLIDGLCKSGRLKIAWELF 328
           Y   ++GLCK   + EA ++F++L    C  D+R    +++ +ID L K GR K A +LF
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSL----CSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
            S+P   L+ +VVTY IM+  +  +G +D+  +LFL ME  G  PD V  N ++   +  
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807

Query: 389 NETSKVVELLHRMDERN 405
            E  +    L ++DE N
Sbjct: 808 GEIMRAGAYLSKIDEMN 824



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 202/368 (54%), Gaps = 6/368 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+TY+T+I+GLC+      A  + + MI+     GV  K D V Y+TIIDGLCK  
Sbjct: 195 CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK----GV--KLDVVTYSTIIDGLCKAQ 248

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD+A+ +L  M DK + PDVVTYN++I G C A   + A+ +   M+D+GV+P+VVT++
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 308

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            I+D LCK   ++ A  +L+ MI   V+P+   YN L+ G+  TG           M + 
Sbjct: 309 TIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYAR 368

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   +V +YS+L++  CKN +   A  ++  M+ KGIKP V  Y  L  G      +   
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADL 428

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L D M  +G++ + + +   +    K   I EA+ +F  +       D+ +Y  LID 
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A   F+ +    +  + V +N +++ LC   + +KA +LF +M  +GV P+
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548

Query: 375 CVAFNTLM 382
            V FNT+M
Sbjct: 549 VVFFNTIM 556



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 215/423 (50%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V+TY+T+I+GLC+      A  + + MI+     GV  KPD V Y TIIDGLCK 
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK----GV--KPDVVTYNTIIDGLCKA 317

Query: 74  GFVDKAKELLLQMKDKNI-----------------------------------NPDVVTY 98
             VD+A  +L  M DK++                                   +PDVVTY
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           + ++   C      EA+++F  M+ +G++PNV  + +++      G + + + LL+LM+ 
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVA 437

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN +++N ++  +     ++ A  +F  M   G   +V +Y ILI+  CK   ++ 
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+  +++M++ G+ P  V +N+L  GL  + + E+A +LF EM   GV  +   + T + 
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            LC  G ++ A  L  ++  +    ++ SY+ LI G C +GR   A +L   +    L  
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+++Y+ ++   C  G++D A+ LF +M  KGV P  V ++T++ G       S+  EL 
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELY 677

Query: 399 HRM 401
             M
Sbjct: 678 LNM 680



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 211/435 (48%), Gaps = 43/435 (9%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  +   G   N +  + L+NGLC       A+++   ++    EFG  C P+ V   
Sbjct: 111 AAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI---LLRRMPEFG--CMPNVVSCN 165

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDK---NINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           T++ GLC E  V++A ELL  M +    N  P+VVTYN++I G C A   + A+ +   M
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM 225

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV+ +VVT+S I+D LCK   ++ A  +L+ MI  GV+P+   YNT++DG C    V
Sbjct: 226 IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 285

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA+ +   M   G K +V +Y+ +I+G CK + ++ A  +   M+ K +KP + TYN L
Sbjct: 286 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL 345

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     + +   +  +EM   G+  D   Y   +D LCKNG   EA ++F  +     
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405

Query: 302 ELDIRSYSCLIDG--------------------------------LC---KSGRLKIAWE 326
           + ++  Y  L+ G                                LC   K   +  A  
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F  + +  L  DVVTY I+I ALC  G++D A   F  M   GV P+ V FN+L+ G  
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525

Query: 387 RNNETSKVVELLHRM 401
             +   K  EL   M
Sbjct: 526 TVDRWEKAEELFFEM 540



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 207/413 (50%), Gaps = 23/413 (5%)

Query: 3   AAALFTKLKAFGC----EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           A +LF ++ A  C     P++ TYS L    CR G           + +G   FG++ K 
Sbjct: 71  AVSLFNRM-ARACSNKVRPDLCTYSILTGCFCRLGR----------IEHGFAAFGLILKT 119

Query: 59  ----DAVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNE 113
               + V+   +++GLC    VD+A ++LL+ M +    P+VV+ N++++G C      E
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEE 179

Query: 114 AKRLFIEMMDQG---VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           A  L   M + G     PNVVT++ I+D LCK   ++ A  +L+ MI  GV+ +   Y+T
Sbjct: 180 ALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYST 239

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C    V+RA+ +   M   G K +V +Y+ +I+G CK + ++ A  +   M+ KG
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG 299

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           +KP VVTYNT+  GL +   V+RA  +   M    V  D   Y   I G    G   E +
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
                +     + D+ +YS L+D LCK+G+   A ++F+ + R  +  +V  Y I++H  
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A G +    DL   M A G++P+   FN ++    +     + + +  RM +
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 160/311 (51%), Gaps = 6/311 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  PNV+ ++T++  LC  G  +VA  L + M       GV  +P+ +
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM----ERVGV--RPNVI 585

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G C  G  D+A +LL  M    + PD+++Y++++RG+C     + A  LF EM
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P  VT+S I+  L    +  EA +L   MI+ G + + + YN +++G C T  V
Sbjct: 646 LRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCV 705

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F S+ S   + N+ +++I+I+   K    + A+ L++ + S G+ P VVTY  +
Sbjct: 706 DEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIM 765

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              + +   ++    LF  M++ G   D+      I  L   G I+ A      +  +  
Sbjct: 766 MKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNF 825

Query: 302 ELDIRSYSCLI 312
            L+  + S LI
Sbjct: 826 SLEASTTSLLI 836



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 9/264 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A  L   ++  G  PNVI+Y+TLI G C  G T  A  L + M++      V  KPD 
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS------VGLKPDL 619

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T++ G CK G +D A  L  +M  K + P  VTY+++++G  +    +EAK L++ 
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q ++ T+++I++ LCK   ++EA ++ + +    +RPN   +  ++D     GR
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF S+ S G   NV +Y I++    +   ++   +L+  M   G  P  V  N 
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799

Query: 241 LFIGLFEIHQVERA---FKLFDEM 261
           +   L    ++ RA       DEM
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEM 823



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 145/305 (47%), Gaps = 12/305 (3%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQI---GVRPNA 165
           ++A +LF E++      +V  F+ +++ + +   +   E A  L   M +     VRP+ 
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-LYS 224
             Y+ L   FC  GR+      F  +   G + N    + L+NG C  K ++ A+  L  
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLC 281
            M   G  P VV+ NTL  GL    +VE A +L   M   G      +   Y T IDGLC
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADV 340
           K   +  A  + + +     +LD+ +YS +IDGLCK+  +  A  +  H + +GV   DV
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK-PDV 269

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTYN +I  LC    +D+A  +   M  KGV PD V +NT++ G  +     +   +L  
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 401 MDERN 405
           M +++
Sbjct: 330 MIDKD 334



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 29/255 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EAA L   + + G +P++I+Y TL+ G C+TG    A  LF EM+      G V      
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   + D   Y  I++GLCK   VD+A ++   +  K++ 
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++T+  +I          +A  LF  +   G+ PNVVT+ ++M  + + G ++E   L
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNL 781

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M + G  P++ + N ++      G + RA      ++ M       + S+LI+ + +
Sbjct: 782 FLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841

Query: 213 NKEIEGALSLYSEML 227
            +    A SL  + L
Sbjct: 842 EEYKNHAKSLPEKYL 856



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 7/160 (4%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---NGYIVEALELF-RTLRIL--KCELD 304
           ++ A KLFDE+  H   A   A+   ++ + +   +     A+ LF R  R    K   D
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS L    C+ GR++  +  F  + +     + V  N +++ LC   ++D+A D+ L
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 365 -DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             M   G  P+ V+ NTL+ G        + +ELLH M E
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAE 189


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 216/371 (58%), Gaps = 9/371 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+  FG EP+V+T S+LING C+      A++L  +M     E G   +PD VI
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM----EEMGF--RPDVVI 117

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG CK G V+ A EL  +M+   +  D VTYNS++ G C +   ++A RL  +M+
Sbjct: 118 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 177

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+TF+ ++D   K GK  EA +L E M +  V P+ F YN+L++G C+ GRV+
Sbjct: 178 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 237

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK++   M + GC  +V +Y+ LING+CK+K ++    L+ EM  +G+    +TYNT+ 
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 297

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+  + + A ++F  M       +   Y   + GLC N  + +AL LF  ++  + E
Sbjct: 298 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 354

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK G ++ AW+LF SL    L  DVV+Y  MI   C   + DK+  L
Sbjct: 355 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 414

Query: 363 FLDMEAKGVAP 373
           +  M+  G+ P
Sbjct: 415 YRKMQEDGLLP 425



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 221/399 (55%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF  ++  G   ++ +Y+ +IN LCR    ++AL++  +M+    +FG   +PD V  +
Sbjct: 31  SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 84

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I+G C+   V  A +L+ +M++    PDVV YN++I G C     N+A  LF  M   
Sbjct: 85  SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 144

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + VT++ ++  LC +G+  +A++L+  M+   + PN   +  ++D F   G+ + A
Sbjct: 145 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 204

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +L+  M       +VF+Y+ LING C +  ++ A  +   M++KG  P VVTYNTL  G
Sbjct: 205 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 264

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +V+   KLF EM + G+  DT  Y T I G  + G    A E+F  +       +
Sbjct: 265 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 321

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+YS L+ GLC + R++ A  LF ++ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 322 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 381

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  KG+ PD V++ T++ G  R  +  K   L  +M E
Sbjct: 382 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 183/325 (56%), Gaps = 13/325 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +K++  G  P+V+ Y+T+I+G C+ G    A+ LF+ M       GV  + DAV
Sbjct: 98  DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RADAV 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GLC  G    A  L+  M  ++I P+V+T+ +VI  F      +EA +L+ EM
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V P+V T++ +++ LC +G+++EA Q+L+LM+  G  P+   YNTL++GFC + RV
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   +LF  M   G   +  +Y+ +I GY +    + A  ++S M S   +P + TY+ L
Sbjct: 272 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 328

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +VE+A  LF+ MQ+  +  D   Y   I G+CK G + +A +LFR+L     
Sbjct: 329 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 388

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE 326
           + D+ SY+ +I G C+    K  W+
Sbjct: 389 KPDVVSYTTMISGFCR----KRQWD 409



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 3/346 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V ++ ++  + K    D    L   M+   I  D+ +YN VI   C  +    A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P+VVT S +++  C+  ++ +A  L+  M ++G RP+  +YNT++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G VN A ELF  ME  G + +  +Y+ L+ G C +     A  L  +M+ + I P V+T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +  +     +  +   A KL++EM R  V  D + Y + I+GLC +G + EA ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  D+ +Y+ LI+G CKS R+    +LF  + +  L+ D +TYN +I      G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A ++F  M+++   P+   ++ L+ G   N    K + L   M +
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 350



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 158/312 (50%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P +V ++ V+     + + +    LF  M   G+  ++ +++++++ LC+  +   A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M++ G  P+    ++L++GFC   RV  A +L   ME MG + +V  Y+ +I+G CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A+ L+  M   G++   VTYN+L  GL    +   A +L  +M    +  +   
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   ID   K G   EA++L+  +     + D+ +Y+ LI+GLC  GR+  A ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + DVVTYN +I+  C   ++D+   LF +M  +G+  D + +NT++ G  +     
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 393 KVVELLHRMDER 404
              E+  RMD R
Sbjct: 308 AAQEIFSRMDSR 319



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   GC P+V+TY+TLING C++        LF EM     + G+V   D +
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLV--GDTI 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII G  + G  D A+E+  +M  +   P++ TY+ ++ G C      +A  LF  M
Sbjct: 292 TYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 348

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++ ++ T+++++  +CK G +E+A  L   +   G++P+   Y T++ GFC   + 
Sbjct: 349 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 408

Query: 182 NRAKELFVSMESMG 195
           +++  L+  M+  G
Sbjct: 409 DKSDLLYRKMQEDG 422



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%)

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P++V ++ +   + +    +    LF  M+  G+  D ++Y   I+ LC+    V AL +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +     E D+ + S LI+G C+  R+  A +L   +       DVV YN +I   C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G ++ A +LF  ME  GV  D V +N+L+ G   +   S    L+  M  R+
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  264 bits (674), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 216/371 (58%), Gaps = 9/371 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+  FG EP+V+T S+LING C+      A++L  +M     E G   +PD VI
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM----EEMGF--RPDVVI 176

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG CK G V+ A EL  +M+   +  D VTYNS++ G C +   ++A RL  +M+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+TF+ ++D   K GK  EA +L E M +  V P+ F YN+L++G C+ GRV+
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK++   M + GC  +V +Y+ LING+CK+K ++    L+ EM  +G+    +TYNT+ 
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+  + + A ++F  M       +   Y   + GLC N  + +AL LF  ++  + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+CK G ++ AW+LF SL    L  DVV+Y  MI   C   + DK+  L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473

Query: 363 FLDMEAKGVAP 373
           +  M+  G+ P
Sbjct: 474 YRKMQEDGLLP 484



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 221/399 (55%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF  ++  G   ++ +Y+ +IN LCR    ++AL++  +M+    +FG   +PD V  +
Sbjct: 90  SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I+G C+   V  A +L+ +M++    PDVV YN++I G C     N+A  LF  M   
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + VT++ ++  LC +G+  +A++L+  M+   + PN   +  ++D F   G+ + A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +L+  M       +VF+Y+ LING C +  ++ A  +   M++KG  P VVTYNTL  G
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +V+   KLF EM + G+  DT  Y T I G  + G    A E+F  +       +
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 380

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+YS L+ GLC + R++ A  LF ++ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  KG+ PD V++ T++ G  R  +  K   L  +M E
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 183/325 (56%), Gaps = 13/325 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +K++  G  P+V+ Y+T+I+G C+ G    A+ LF+ M       GV  + DAV
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RADAV 210

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GLC  G    A  L+  M  ++I P+V+T+ +VI  F      +EA +L+ EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V P+V T++ +++ LC +G+++EA Q+L+LM+  G  P+   YNTL++GFC + RV
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   +LF  M   G   +  +Y+ +I GY +    + A  ++S M S   +P + TY+ L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 387

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +VE+A  LF+ MQ+  +  D   Y   I G+CK G + +A +LFR+L     
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE 326
           + D+ SY+ +I G C+    K  W+
Sbjct: 448 KPDVVSYTTMISGFCR----KRQWD 468



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 3/346 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V ++ ++  + K    D    L   M+   I  D+ +YN VI   C  +    A  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P+VVT S +++  C+  ++ +A  L+  M ++G RP+  +YNT++DG C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G VN A ELF  ME  G + +  +Y+ L+ G C +     A  L  +M+ + I P V+T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +  +     +  +   A KL++EM R  V  D + Y + I+GLC +G + EA ++   + 
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  D+ +Y+ LI+G CKS R+    +LF  + +  L+ D +TYN +I      G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A ++F  M+++   P+   ++ L+ G   N    K + L   M +
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 159/318 (50%), Gaps = 5/318 (1%)

Query: 92  NPDVVTYNSVIRGFCYANDSN-----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           NP +V + S   G  ++   +     E   LF +M+     P++V FS ++ ++ K+   
Sbjct: 26  NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +    L   M   G+  + + YN +++  C   R   A  +   M   G + +V + S L
Sbjct: 86  DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+C+   +  A+ L S+M   G +P VV YNT+  G  +I  V  A +LFD M+R GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            AD   Y + + GLC +G   +A  L R + +     ++ +++ +ID   K G+   A +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L+  + R  +  DV TYN +I+ LC  G++D+A  +   M  KG  PD V +NTL+ G  
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325

Query: 387 RNNETSKVVELLHRMDER 404
           ++    +  +L   M +R
Sbjct: 326 KSKRVDEGTKLFREMAQR 343



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 162/324 (50%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +L  +M      P +V ++ V+     + + +    LF  M   G+  ++ +++++++ L
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+  +   A  ++  M++ G  P+    ++L++GFC   RV  A +L   ME MG + +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
             Y+ +I+G CK   +  A+ L+  M   G++   VTYN+L  GL    +   A +L  +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M    +  +   +   ID   K G   EA++L+  +     + D+ +Y+ LI+GLC  GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A ++   +     + DVVTYN +I+  C   ++D+   LF +M  +G+  D + +NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  +        E+  RMD R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   GC P+V+TY+TLING C++        LF EM     + G+V   D +
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM----AQRGLV--GDTI 350

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII G  + G  D A+E+  +M  +   P++ TY+ ++ G C      +A  LF  M
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 407

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++ ++ T+++++  +CK G +E+A  L   +   G++P+   Y T++ GFC   + 
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467

Query: 182 NRAKELFVSMESMG 195
           +++  L+  M+  G
Sbjct: 468 DKSDLLYRKMQEDG 481



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 89/190 (46%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E  + L+ +M+     P++V ++ +   + +    +    LF  M+  G+  D ++Y  
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+ LC+    V AL +   +     E D+ + S LI+G C+  R+  A +L   +    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              DVV YN +I   C  G ++ A +LF  ME  GV  D V +N+L+ G   +   S   
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 396 ELLHRMDERN 405
            L+  M  R+
Sbjct: 230 RLMRDMVMRD 239


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/433 (33%), Positives = 238/433 (54%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVAL----------NLFEEMI 46
           EA   F  +   G +P+V TY  +++G    G     H ++ L          ++F    
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G++ K              PDAV Y  +ID LCK G VD A+    QM ++ + 
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+V ++S++ G C  +   + + LF EM++ G+ PN+V F+ I+  LCK G++ E  +L
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++ +  +GVRP+   YNTL+DG CL G ++ A +L   M S+G K + FSY+ L++GYCK
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A S + +MLS GI P VVTYNT+  GLF+  +   A +L+  M   G   D + 
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYT 625

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GLCK+  + EA+++F+ L     +L+I +++ +I  L K GR + A +LF ++P
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ +VVTY +++  L  +G +++   LF  ME  G AP+    N L+   +   + S
Sbjct: 686 ANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 745

Query: 393 KVVELLHRMDERN 405
           +    L ++DERN
Sbjct: 746 RAGAYLSKLDERN 758



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 206/426 (48%), Gaps = 41/426 (9%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           + + C PNV++YST+ING    G      NLF EM++          PD V YTT+IDGL
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRG------IPPDVVTYTTVIDGL 248

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK    D+A+ +  QM D  + P++ TYN +I G+       E  R+  EM   G +PN 
Sbjct: 249 CKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNC 308

Query: 131 VTFSVIMDELCKNGKMEEAS-----------------------------------QLLEL 155
            T+  +++ LCKNG+  EA                                     LL L
Sbjct: 309 CTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNL 368

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G+ PN  ++N     +   G +++A ++F  M   G   +  SY  LI+  CK   
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A   +++M+++G+ P +V +++L  GL  + + E+  +LF EM   G+  +   + T
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            +  LCK G ++E   L  ++  +    D+ SY+ LIDG C +G +  A +L   +    
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L  D  +YN ++H  C  G++D A+  F  M + G+ P  V +NT++ G  +    S+  
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 396 ELLHRM 401
           EL   M
Sbjct: 609 ELYLNM 614



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 193/381 (50%), Gaps = 8/381 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  +   G   + I  + L+NGLC       A+++  + +    E G  C PD V Y 
Sbjct: 115 AAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM---PELG--CMPDTVSYN 169

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNI---NPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ GLC E   ++A ELL  M D  +    P+VV+Y++VI GF      ++   LF+EM
Sbjct: 170 ILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEM 229

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           MD+G+ P+VVT++ ++D LCK    + A  + + MI  GV+PN   YN L+ G+   G+ 
Sbjct: 230 MDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW 289

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +   M + G K N  +Y  L+N  CKN     A   +  M+ KGIKP+V TY  +
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     L + M  +G++ +   +  F     K G I +A+++F  +R    
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY  LID LCK GR+  A   F+ +    +  D+V ++ +++ LC   K +K  +
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           LF +M   G+ P+ V FNT++
Sbjct: 470 LFFEMLNVGIHPNIVFFNTIL 490



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 219/467 (46%), Gaps = 69/467 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ L   + + G +P+  +Y+TL++G C+ G    A + F +M++ NG       P  V
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLS-NG-----ITPGVV 589

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+ GL +     +AKEL L M +     D+ TYN ++ G C +N  +EA ++F  +
Sbjct: 590 TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEA-------------------------------- 149
             +G+Q N++TF++++  L K G+ E+A                                
Sbjct: 650 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 150 ---SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                L   M + G  PN+ + N L+      G ++RA      ++         + S+L
Sbjct: 710 EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 207 INGYC----------------------------KNKEIEGALSLYSEMLSKGIKPTVVTY 238
           I+ +                             K + I+ A SL+ EML KG+ P VVTY
Sbjct: 770 ISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTY 829

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NT+  GLF+  +   A +L+  M       + + Y   ++GLCK+  + EA ++F++L  
Sbjct: 830 NTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCS 889

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +L+I +++ +I  L K GR + A +LF ++P   L+ DVVTY ++   L  +G +++
Sbjct: 890 KGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE 949

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              LFL ME  G   D    N L+   ++  + S+    L ++DE+N
Sbjct: 950 FDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKN 996



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 203/441 (46%), Gaps = 69/441 (15%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME   L   ++  G  P+VI+Y+TLI+G C  G    A  L E M++      V  KPD+
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS------VGLKPDS 553

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G CK G +D A     +M    I P VVTYN+++ G       +EAK L++ 
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ T+++I++ LCK+  ++EA ++ + +   G++ N   +N ++      GR
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   NV +Y +++    +   +E   SL+S M   G  P     N 
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 241 LFIGLFEIHQVERA----------------------FKLF--DEMQRH------------ 264
           L   L     + RA                        +F  DE Q H            
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793

Query: 265 ---------------------------GVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                                      G+  D   Y T + GL + G   EA EL+ ++ 
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +++I +Y+ +++GLCKS  +  A+++F SL    L  +++T+NIMI AL   G+ +
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913

Query: 358 KAHDLFLDMEAKGVAPDCVAF 378
            A DLF  + A G+ PD V +
Sbjct: 914 DAMDLFAAIPANGLVPDVVTY 934



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 4/280 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T+S+++   C+ G +E       L+++ G R +  V N L++G C   RV  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI---KPTVVTYNTL 241
           ++ +  M  +GC  +  SY+IL+ G C  K  E AL L   M    +    P VV+Y+T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F   QV++ + LF EM   G+  D   Y T IDGLCK      A  +F+ +     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +I +Y+CLI G    G+ K    +   +  G    +  TY  +++ LC +G+  +A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F  M  KG+ P    +  ++ G       S++ +LL+ M
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 7/226 (3%)

Query: 38   ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
            A +LF EM+           PD V Y TI+ GL + G   +AKEL L M +     ++ T
Sbjct: 810  AYSLFREMLMKG------LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863

Query: 98   YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            YN ++ G C +N  +EA ++F  +  +G+Q N++TF++++  L K G+ E+A  L   + 
Sbjct: 864  YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923

Query: 158  QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              G+ P+   Y  + +     G +     LF++ME  G   +    + L+    +  +I 
Sbjct: 924  ANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDIS 983

Query: 218  GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
             A +  S++  K       T + L I LF   + +   K   E  R
Sbjct: 984  RAGAYLSKLDEKNFSLEASTTSEL-ISLFSRGEYQHHAKSLPEKYR 1028



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 101/224 (45%)

Query: 76   VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            +D A  L  +M  K + PDVVTYN+++ G       +EAK L++ M++   Q N+ T+++
Sbjct: 807  IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 136  IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            I++ LCK+  ++EA ++ + +   G++ N   +N ++      GR   A +LF ++ + G
Sbjct: 867  ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 196  CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
               +V +Y ++     +   +E    L+  M   G        N L   L +   + RA 
Sbjct: 927  LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986

Query: 256  KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
                ++     + +       I    +  Y   A  L    R+L
Sbjct: 987  AYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLL 1030



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 6/186 (3%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  L+  +     + N+ TY+ ++NGLC++     A  +F+ + +   +  +      +
Sbjct: 844  EAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI------I 897

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +  +I  L K G  + A +L   +    + PDVVTY  V           E   LF+ M
Sbjct: 898  TFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTM 957

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G   +    + ++  L + G +  A   L  + +      A   + L+  F      
Sbjct: 958  EKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQ 1017

Query: 182  NRAKEL 187
            + AK L
Sbjct: 1018 HHAKSL 1023


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  264 bits (674), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 147/403 (36%), Positives = 222/403 (55%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G   + ++Y TLINGLC+ G    AL L + +       G + +P+AV
Sbjct: 158 QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAV 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  IID +CK   V+ A +L  QM  K I+PD  T NS+I GFC      EA  L  +M
Sbjct: 212 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P + TFS+++D  CK GK++EA  +L + ++  +  +   YN+LMDG+CL   +
Sbjct: 272 ILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEI 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK++F SM S G   NV SY+ +ING CK K ++ A++L+ EM  + I P VVTYN+L
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++    KL DEM   G   +   Y + +D LCKN ++ +A+ L   L+    
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI GLC+SG+L+ A ++F  L       DV TY +MI   C  G  D A  
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALA 511

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  P+   +  ++L     +E     +LL  M  R
Sbjct: 512 LLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIAR 554



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 202/382 (52%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +++  G   +  T++ LIN   + G   ++ ++F +++    +      P+A+ 
Sbjct: 89  ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFD------PNAIT 142

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+I GLC +G + +A     ++  +  + D V+Y ++I G C       A +L   + 
Sbjct: 143 FNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 202

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + VQPN V +++I+D +CK   + +A  L   M+   + P+ F  N+L+ GFC+ G++ 
Sbjct: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLK 262

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M        ++++SIL++ +CK  +++ A  +    + K I   VVTYN+L 
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + ++ +A  +FD M   GV A+  +Y T I+GLCK   + EA+ LF  +R  K  
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ LIDGL K G++    +L   +       +++TYN ++ ALC +  +DKA  L
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
             +++ +G+ PD   +  L+ G
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKG 464



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 197/389 (50%), Gaps = 8/389 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P +I ++ +++ L +  H   AL+L ++M +NG          D   +  +I+   + G 
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNG-------IVSDFFTFNILINCFSQLGL 120

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
              +  +  ++  K  +P+ +T+N++I+G C     ++A     +++ QG   + V++  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LCK G++  A QLL+ +    V+PNA +YN ++D  C    VN A +L+  M +  
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              + F+ + LI G+C   +++ A+ L  +M+ + I P + T++ L     +  +V+ A 
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +     +  +  D   Y + +DG C    I +A ++F ++       +++SY+ +I+GL
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK   +  A  LF  +    +I +VVTYN +I  L   GK+     L  +M  +G  P+ 
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNI 420

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + +N+++    +N+   K + LL  + ++
Sbjct: 421 ITYNSILDALCKNHHVDKAIALLTNLKDQ 449



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 153/319 (47%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           +  KN  P ++ +N ++     A   + A  L  +M   G+  +  TF+++++   + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
              +  +   +++ G  PNA  +NTL+ G CL G +++A      + + G   +  SY  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK   I  AL L   +  K ++P  V YN +   + +   V  AF L+ +M    
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           ++ D +   + I G C  G + EA+ L   + +      + ++S L+D  CK G++K A 
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            +     +  +I DVVTYN ++   C   +++KA D+F  M ++GV  +  ++ T++ G 
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 386 IRNNETSKVVELLHRMDER 404
            +     + V L   M  R
Sbjct: 361 CKIKMVDEAVNLFEEMRCR 379


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 236/434 (54%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  +F  +   G  P+V +Y+ ++NG    G  +   +LF+ M+ G+G   V+C     
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVL 402

Query: 57  -------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                    KP  V Y T+I  LC+ G +D A E   QM D+ +
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD   Y+ +I+GFC      +AK L  E+M+ G++ ++V F  I++ LCK G++ +A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +L + +G+ P+A VYN LMDG+CL G++ +A  +F +M S G + NV  Y  L+NGYC
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   I+  LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GL KN    EA+ LF+ LR +  ++DI + + +I G+ ++ R++ A +LF S+
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            R  L+   VTY+IMI  L  +G +++A D+F  M+  G  PD    N ++   ++ NE 
Sbjct: 703 SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762

Query: 392 SKVVELLHRMDERN 405
            +    L ++DERN
Sbjct: 763 VRAGAYLSKIDERN 776



 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 210/390 (53%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V+ Y+T+I+G  + G    A +LF+EM+    + G+   PD V Y++++  LCK  
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYSSVVHALCKAR 270

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + PD  TYN++I G+       EA R+F EM  Q + P+VV  +
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +M  LCK GK++EA  + + M   G  P+ F Y  +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G    + ++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GV  D +AY   I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L  D V YN+++   C  GKM+KA  +F  M + G+ P+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M ++
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 179/351 (50%), Gaps = 5/351 (1%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           V  P +  Y  ++D   +    + A     Q+    +  D +  + +++GFC A  ++EA
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 115 KRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV--RPNAFVYNTL 171
             + +    + G  P+V ++++++  LC  GK  +A  LL +M + G    P+   YNT+
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DGF   G VN+A +LF  M   G   ++ +YS +++  CK + ++ A +   +M++KG+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P   TYN L  G     Q + A ++F EM+R  +  D  A  T +  LCK G I EA +
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV-TYNIMIHAL 350
           +F T+ +     D+ SY+ +++G    G L    +LF  L  G  IA V+ T+N++I A 
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNVLIKAY 406

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              G +DKA  +F +M   GV P  V + T++    R  +    +E  ++M
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 186/387 (48%), Gaps = 6/387 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++   G  P+  TY+ LI G   TG    A+ +F+EM   +        PD V
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPDVV 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T++  LCK G + +A+++   M  K  NPDV +Y  ++ G+       +   LF  M
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P + TF+V++      G +++A  +   M   GV+P+   Y T++   C  G++
Sbjct: 388 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E F  M   G   + ++Y  LI G+C +  +  A  L SE+++ G++  +V + ++
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L ++ +V  A  +FD     G+  D   Y   +DG C  G + +AL +F  +     
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++  Y  L++G CK GR+     LF  + +  +    + YNI+I  L   G+   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN 388
            F +M   G+A +   ++ ++ G  +N
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKN 654



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 41/321 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ + ++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 536

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y  ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I+D L + G+   A                               
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPA------------------------------- 625

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
               K  F  M   G   N  +YSI++ G  KN+  + A+ L+ E+ +  +K  ++T NT
Sbjct: 626 ----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G+F+  +VE A  LF  + R G+      Y   I  L K G + EA ++F +++   
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741

Query: 301 CELDIRSYSCLIDGLCKSGRL 321
           CE D R  + ++  L K   +
Sbjct: 742 CEPDSRLLNHVVRELLKKNEI 762



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 6/293 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F      G  P+ + Y+ L++G C  G    AL +F+ M++   E      P+ 
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNV 571

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+++G CK G +D+   L  +M  K I P  + YN +I G   A  +  AK  F E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+  N  T+S+++  L KN   +EA  L + +  + V+ +    NT++ G   T R
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  AK+LF S+   G      +YSI+I    K   +E A  ++S M + G +P     N 
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           +   L + +++ RA     ++     + +       +D     G   E +   
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 41/193 (21%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  D    
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 152 SHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 177

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV--APDCVAFNTLMLGCIRNNET 391
              + DV +YNI++ +LC  GK  +A DL   M   G   +PD VA+NT++ G  +  + 
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 392 SKVVELLHRMDER 404
           +K  +L   M +R
Sbjct: 238 NKACDLFKEMVQR 250


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 228/400 (57%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P++ T++ LI      G    A+ +F EM     + GV  KP  V Y T
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPHVVTYMT 436

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   Y+ +I+GFC      +AK L  E+M+ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ ++V F  I++ LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A 
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV  Y  L+NGYCK   I+  LSL+ EML KGIKP+ + YN +  GL
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           FE  +   A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  ++DI
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +I G+ ++ R++ A +LF S+ R  L+   VTY+IMI  L  +G +++A D+F  
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSS 736

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  PD    N ++   ++ NE  +    L ++DERN
Sbjct: 737 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 776



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V+ Y+T+I+G  + G    A +LF+EM+    + G+   PD V Y++++  LCK  
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYSSVVHALCKAR 270

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + PD  TYN++I G+       EA R+F EM  Q + P+VV  +
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +M  LCK GK++EA  + + M   G  P+ F Y  +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   +++++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GV  D +AY   I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L  D V YN+++   C  GKM+KA  +F  M + G+ P+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M ++
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 177/350 (50%), Gaps = 3/350 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           V  P +  Y  ++D   +    + A     Q+    +  D +  + +++GFC A  ++EA
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 115 KRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV--RPNAFVYNTL 171
             + +    + G  P+V ++++++  LC  GK  +A  LL +M + G    P+   YNT+
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DGF   G VN+A +LF  M   G   ++ +YS +++  CK + ++ A +   +M++KG+
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P   TYN L  G     Q + A ++F EM+R  +  D  A  T +  LCK G I EA +
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F T+ +     D+ SY+ +++G    G L    +LF  +    +  D+ T+N++I A  
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G +DKA  +F +M   GV P  V + T++    R  +    +E  ++M
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 187/387 (48%), Gaps = 6/387 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++   G  P+  TY+ LI G   TG    A+ +F+EM   +        PD V
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPDVV 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T++  LCK G + +A+++   M  K  NPDV +Y  ++ G+       +   LF  M
Sbjct: 328 ALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P++ TF+V++      G +++A  +   M   GV+P+   Y T++   C  G++
Sbjct: 388 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E F  M   G   + ++Y  LI G+C +  +  A  L SE+++ G++  +V + ++
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSI 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L ++ +V  A  +FD     G+  D   Y   +DG C  G + +AL +F  +     
Sbjct: 508 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++  Y  L++G CK GR+     LF  + +  +    + YNI+I  L   G+   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN 388
            F +M   G+A +   ++ ++ G  +N
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKN 654



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 41/321 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ + ++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 536

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y  ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I+D L + G+   A                               
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPA------------------------------- 625

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
               K  F  M   G   N  +YSI++ G  KN+  + A+ L+ E+ +  +K  ++T NT
Sbjct: 626 ----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G+F+  +VE A  LF  + R G+      Y   I  L K G + EA ++F +++   
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741

Query: 301 CELDIRSYSCLIDGLCKSGRL 321
           CE D R  + ++  L K   +
Sbjct: 742 CEPDSRLLNHVVRELLKKNEI 762



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 6/293 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F      G  P+ + Y+ L++G C  G    AL +F+ M++   E      P+ 
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNV 571

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+++G CK G +D+   L  +M  K I P  + YN +I G   A  +  AK  F E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+  N  T+S+++  L KN   +EA  L + +  + V+ +    NT++ G   T R
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  AK+LF S+   G      +YSI+I    K   +E A  ++S M + G +P     N 
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           +   L + +++ RA     ++     + +       +D     G   E +   
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 41/193 (21%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  D    
Sbjct: 92  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 151

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 152 SHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 177

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV--APDCVAFNTLMLGCIRNNET 391
              + DV +YNI++ +LC  GK  +A DL   M   G   +PD VA+NT++ G  +  + 
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 392 SKVVELLHRMDER 404
           +K  +L   M +R
Sbjct: 238 NKACDLFKEMVQR 250


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 237/434 (54%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  +F  +   G  P+V +Y+ ++NG    G  +   +LF+ M+ G+G   V+C     
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVL 400

Query: 57  -------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                    KP+ + YTT+I  LC+ G +D A E   QM D+ +
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD   Y+ +I+GFC      +AK L  E+M+ G+  ++V FS I++ LCK G++ +A  
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +L + +G+ P A VY+ LMDG+CL G++ +A  +F +M S G + N   Y  L+NGYC
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   I+  LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GL KN    EA+ LF+ LR +  ++DI + + +I G+ ++ R++ A +LF S+
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            R  L+  VVTY+IMI  L  +G +++A D+F  M+  G  PD    N ++   ++ NE 
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760

Query: 392 SKVVELLHRMDERN 405
            +    L ++DERN
Sbjct: 761 VRAGAYLSKIDERN 774



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 216/434 (49%), Gaps = 39/434 (8%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +    GC P+V +YS L+  LC  G +  A +L   M  G    G VC PD V Y T
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYNT 224

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN------------- 112
           +IDG  KEG V+KA +L  +M  + I PD VTY+SV+   C A   +             
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 113 ----------------------EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
                                 EA R+F EM  Q + P+VVTF+++M  LCK GK++EA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            + + M   G  P+ F YN +++G+   G +    +LF  M   G    + ++++LI  Y
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                ++ A+ +++EM   G+KP V+TY T+   L  I +++ A + F++M   GVA D 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           +AY   I G C +G +++A EL   +      LDI  +S +I+ LCK GR+  A  +F  
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                L    V Y++++   C  GKM+KA  +F  M + G+ P+ V + TL+ G  +   
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 391 TSKVVELLHRMDER 404
             + + L   M ++
Sbjct: 585 IDEGLSLFREMLQK 598



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 190/376 (50%), Gaps = 7/376 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G  + A+ LF    +   +   V  P +  Y  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  D++  N +++GFC A  ++EA  + +    + G  P+V ++S+++  LC  GK  +
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    P+   YNT++DGF   G VN+A +LF  M   G   +  +YS +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++KG+ P   TYN L  G     Q + A ++F EM+R  +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   +  LCK G I EA ++F T+ +     D+ SY+ +++G    G L    +
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 327 LFHSLPRGVLIADVV-TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           LF  L  G  IA V+ T+N++I A    G +DKA  +F +M   GV P+ + + T++   
Sbjct: 381 LF-DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 386 IRNNETSKVVELLHRM 401
            R  +    +E  ++M
Sbjct: 440 CRIGKMDDAMEKFNQM 455



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 153/321 (47%), Gaps = 41/321 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   P A
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTA 534

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DG C  G ++KA  +   M    I P+ V Y +++ G+C     +E   LF E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I+D L + G+   A                               
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPA------------------------------- 623

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
               K  F  M   G   N  +YSI++ G  KN+  + A+ L+ E+ +  +K  ++T NT
Sbjct: 624 ----KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G+F+  +VE A  LF  + R G+      Y   I  L K G + EA ++F +++   
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 301 CELDIRSYSCLIDGLCKSGRL 321
           CE D R  + ++  L K   +
Sbjct: 740 CEPDSRLLNHVVRELLKKNEI 760



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 43/194 (22%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  D    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 149

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 150 NHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 175

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNTLMLGCIRNNE 390
              + DV +Y+I++ +LC  GK  +A DL L M A+G A   PD VA+NT++ G  +  +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234

Query: 391 TSKVVELLHRMDER 404
            +K  +L   M +R
Sbjct: 235 VNKACDLFKEMVQR 248



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+A   + ++IT +T+I G+ +T     A +LF  +       G+V  P  V
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI----SRSGLV--PCVV 710

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I  L KEG V++A+++   M++    PD    N V+R     N+   A     ++
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++      +T  +++D     G   E  + L
Sbjct: 771 DERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 228/400 (57%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P++ T++ LI      G    A+ +F EM     + GV  KPD V Y T
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPDVVTYRT 434

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   Y+ +I+GFC      +AK L  E+M+ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  ++V FS I++ LCK G++ +A  + +L + +G+ P A VY+ LMDG+CL G++ +A 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + N   Y  L+NGYCK   I+  LSL+ EML KGIKP+ + YN +  GL
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           FE  +   A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  +++I
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 674

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +I G+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  
Sbjct: 675 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSS 734

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  PD    N ++   ++ NE  +    L ++DERN
Sbjct: 735 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774



 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 214/390 (54%), Gaps = 6/390 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V+ YST+I+G  + G    A +LF+EM+    + G+   PD V Y++++  LCK  
Sbjct: 215 CSPDVVAYSTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDFVTYSSVVHALCKAR 268

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+  L QM +K + P+  TYN++I G+       EA R+F EM    + P+VVT S
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++M  LCK GK++EA  + + M   G  PN F Y  +++G+   G +    +LF  M   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   +++++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            + F++M   GVA D +AY   I G C +G +++A EL   +      LDI  +S +I+ 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A  +F       L    V Y++++   C  GKM+KA  +F  M + G+ P+
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V + TL+ G  +     + + L   M ++
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 199/379 (52%), Gaps = 4/379 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +    GC P+V +YS L+  LC  G +  A +L   M  G    G VC PD V Y+T
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYST 224

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG  KEG V+KA +L  +M  + I PD VTY+SV+   C A   ++A+    +M+++G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ ++      G+ +EA ++ + M +  + P+    + LM   C  G++  A+
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F +M   G   NVFSY+I++NGY     +     L+  ML  GI P + T+N L    
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +++A  +F+EM+ HGV  D   YRT I  LC+ G + +A+E F  +       D 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y CLI G C  G L  A EL   +    +  D+V ++ +I+ LC  G++  A ++F  
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 366 MEAKGVAPDCVAFNTLMLG 384
               G+ P  V ++ LM G
Sbjct: 525 TVNVGLHPTAVVYSMLMDG 543



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 5/375 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G  + A+ LF    +   +   V  P +  Y  ++D   +    + A     Q+   
Sbjct: 83  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 140

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  +++  N +++GFC A  ++EA  + +    + G  P+V ++S+++  LC  GK  +
Sbjct: 141 GLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    P+   Y+T++DGF   G VN+A +LF  M   G   +  +YS +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++KG+ P   TYN L  G     Q + A ++F EM+RH +
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     ++ SY+ +++G    G L    +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD 380

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +    +  D+ T+N++I A    G +DKA  +F +M   GV PD V + T++    
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 387 RNNETSKVVELLHRM 401
           R  +    +E  ++M
Sbjct: 441 RIGKMDDAMEKFNQM 455



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   P A
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTA 534

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DG C  G ++KA  +   M    I P+ V Y +++ G+C     +E   LF E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I+D L + G+   A      M + G+  N   YN ++ G      
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRC 654

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  LF  + +M  K N+ + + +I G  + + +E A  L++ +   G+ P VVTY+ 
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSI 714

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  MQ  G   D+      +  L K   IV A
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 43/194 (22%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  +    
Sbjct: 90  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIA 149

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 150 NHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 175

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNTLMLGCIRNNE 390
              + DV +Y+I++ +LC  GK  +A DL L M A+G A   PD VA++T++ G  +  +
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234

Query: 391 TSKVVELLHRMDER 404
            +K  +L   M +R
Sbjct: 235 VNKACDLFKEMVQR 248



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+A   + N+IT +T+I G+ +T     A +LF  +       G+V  P  V
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI----SRSGLV--PCVV 710

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I  L KEG V++A+++   M++    PD    N V+R     N+   A     ++
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++      +T  +++D     G   E  + L
Sbjct: 771 DERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/403 (36%), Positives = 222/403 (55%), Gaps = 6/403 (1%)

Query: 3   AAALFT-KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAA F   L+  G E N  T+ T+INGLC+ G T  A++  E++   N  F ++     +
Sbjct: 95  AAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLL-----I 149

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TI+D LCK+G +  A      M  K I PD+V YNS+I G C     NEA  L   M
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV TF+V++D  CK GK+  A  ++  M+ +GV P+   YN+++ G CL  ++
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++F  M   G   NV +YS LI+G+CK + I  A+ +  EM++ G+   VVT++TL
Sbjct: 270 NDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTL 329

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  + E A +LF  M  H    +       +DGL K  +  EA+ LFR +  +  
Sbjct: 330 IGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNL 389

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           EL+I +Y+ ++DG+C  G+   A ELF  LP   +  DVV Y  MI  LC +G +D A D
Sbjct: 390 ELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAED 449

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L + ME  G  P+   +N L+ G ++  + S+  + L  M  +
Sbjct: 450 LLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGK 492



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 214/391 (54%), Gaps = 7/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP V+T++TLINGLC  G+   A    + + +   E       ++  + TII+GLCK 
Sbjct: 72  GVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYE------SNSYTHGTIINGLCKV 125

Query: 74  GFVDKAKELLLQMKDKNINPDV-VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           G    A   L +++ +N   D+ + Y++++   C       A   F  M  +G+QP++V 
Sbjct: 126 GDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVA 185

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LC  G+  EA+ LL  M++ G+ PN   +N L+D FC  G+++RAK +   M 
Sbjct: 186 YNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMV 245

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G + +V +Y+ +I+G+C   ++  A+ ++  M+ KG+ P VVTY++L  G  +   + 
Sbjct: 246 HVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNIN 305

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           +A  + DEM  +G+  D   + T I G CK G    A+ELF T+       ++++ + ++
Sbjct: 306 KAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIIL 365

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DGL K      A  LF  + +  L  ++VTYNI++  +C+ GK + A +LF  + +KG+ 
Sbjct: 366 DGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQ 425

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            D VA+ T++ G  +        +LL +M+E
Sbjct: 426 IDVVAYTTMIKGLCKEGLLDDAEDLLMKMEE 456



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 161/349 (46%), Gaps = 1/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    + T+   + K      A  L+       + PDV T   VI   C+   +     +
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   GV+P VVTF+ +++ LC  G +  A++  + +  +G   N++ + T+++G C 
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 178 TGRVNRAKELFVSMESMGCKHNVF-SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            G    A      +E      ++  +YS +++  CK+  +  AL+ +S M  KGI+P +V
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN+L  GL    +   A  L   M R G+  +   +   +D  CK G I  A  +   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  E D+ +Y+ +I G C   ++  A ++F  +    L+ +VVTY+ +IH  C    +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +KA  +  +M   G+  D V ++TL+ G  +       +EL   M E +
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 13/388 (3%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           ++TL   + +  H   A++L +        + +  KPD    T +I+ LC          
Sbjct: 10  FATLFGVIVKMKHYATAISLIKH------TYSLGVKPDVHTLTIVINCLCHLKHTVFGFS 63

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +L  M    + P VVT+ ++I G C   +   A R    + D G + N  T   I++ LC
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 142 KNGKMEEASQLLELMIQIGVRPNAF----VYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           K G    A   LE   +I  R   F     Y+T+MD  C  G +  A   F  M   G +
Sbjct: 124 KVGDTAGAISYLE---KIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            ++ +Y+ LI+G C       A +L   M+ KGI P V T+N L     +  ++ RA  +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
              M   GV  D   Y + I G C    + +A+++F  +       ++ +YS LI G CK
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +  +  A  +   +    L  DVVT++ +I   C  G+ + A +LF  M      P+   
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT 360

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
              ++ G  +    S+ + L  +M++ N
Sbjct: 361 CAIILDGLFKCQFHSEAISLFRKMEKMN 388



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 41/317 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCR------------------------------ 31
           EA  L   +   G  PNV T++ L++  C+                              
Sbjct: 201 EATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVI 260

Query: 32  TGHTIV-----ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           +GH ++     A+ +FE MI+     G++  P+ V Y+++I G CK   ++KA  +L +M
Sbjct: 261 SGHCLLSQMNDAVKVFELMIHK----GLL--PNVVTYSSLIHGWCKTRNINKAIFVLDEM 314

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
            +  +N DVVT++++I GFC A     A  LF  M +    PN+ T ++I+D L K    
Sbjct: 315 VNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFH 374

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            EA  L   M ++ +  N   YN ++DG C  G+ N A+ELF  + S G + +V +Y+ +
Sbjct: 375 SEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTM 434

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G CK   ++ A  L  +M   G  P   TYN L  GL + + + R+ K    M+  G+
Sbjct: 435 IKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGL 494

Query: 267 AADTWAYRTFIDGLCKN 283
           +AD       I     N
Sbjct: 495 SADATTTELLISYFSAN 511



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  PNV+TYS+LI+G C+T +   A+ + +EM+N NG        D V
Sbjct: 271 DAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVN-NG-----LNLDVV 324

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T+I G CK G  + A EL   M + +  P++ T   ++ G       +EA  LF +M
Sbjct: 325 TWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKM 384

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++ N+VT+++++D +C  GK  +A +L   +   G++ +   Y T++ G C  G +
Sbjct: 385 EKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLL 444

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L + ME  GC  N F+Y++L+ G  +  +I  +      M  KG+     T   L
Sbjct: 445 DDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATT-TEL 503

Query: 242 FIGLFEIHQVERAFKLF 258
            I  F  ++   A ++F
Sbjct: 504 LISYFSANKENSALQVF 520


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  261 bits (667), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 207/341 (60%), Gaps = 10/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  +++ G  P V+TY++LI G+C +G    A  LF+EM+  N       KPD V
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN------MKPDVV 315

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ ++D LCKEG V +A  +  +M    + PD+VTY+S+I G C ++   E+  L  EM
Sbjct: 316 TFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM 375

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+VVTFS+ +D  CK G + EA  ++ LMI+ G+RPN   YN+LMDG+CL  ++
Sbjct: 376 LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++F  M + GC  +V SY+ILI GYCK++ I+ A  L+ EM  KG+ P  +T+ TL
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A +LF +M  HG   D   Y T + G CK+G++ EAL LF  L+  K 
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK--KS 553

Query: 302 ELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           +L      C  L+ G+CK+G+L+ A ELF SL    L  DV
Sbjct: 554 QLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 216/409 (52%), Gaps = 41/409 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA      + + G +P V T++ ++NGLC+ G T  A+   ++M+  +      C+P+ 
Sbjct: 191 VEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD------CEPEV 244

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ IID LCK   V++A +L   M+   I+P VVTYNS+I G C +    +A  LF E
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------ 174
           M++  ++P+VVTFS+++D LCK G + EA  +   MIQI + P+   Y++L+ G      
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364

Query: 175 -----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                        FC  G V+ A+ +   M   G + NV +Y+ 
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++GYC + +++ A  ++  M++KG  P V++YN L  G  +  +++ A +LFDEM   G
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  ++  + T I GLC+ G    A ELF+ +    C  D+ +YS L+ G CK G L  A 
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            LF +L +  L  + V   I++  +C  GK++ A +LF  +  + + PD
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
              +++ K++ FG   +V T + LIN LC      +  ++  ++      F +  KP  +
Sbjct: 122 SVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKI------FKLGFKPSII 175

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I+GLC EG + +A E L  +  +   P V T+  ++ G C    ++ A     +M
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++   +P VV++S+I+D LCKN  + EA  L   M  IG+ P    YN+L+ G C +G+ 
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  M     K +V ++SIL++  CK   +  ALS++ +M+   ++P +VTY++L
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +    + +  L +EM    +  D   +  ++D  CK G + EA  +   +     
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ L+DG C   ++  A ++F  +       DV++YNI+I   C   ++D+A  
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  KG+ P+ +   TL+ G  +        EL  +M
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 192/403 (47%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P +  ++ L+  L R  H    ++++ +M      FGV C     
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKM----EFFGVSC--SVY 140

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I+ LC    V     +L ++      P ++T+N++I G C      EA      +
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYI 200

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G QP V T ++I++ LCK GK   A   ++ M+++   P    Y+ ++D  C    V
Sbjct: 201 MSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV 260

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +LF  M S+G    V +Y+ LI G C + + + A  L+ EML   +KP VVT++ L
Sbjct: 261 NEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSIL 320

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  A  +F +M +  +  D   Y + I G+CK+    E+  L   +     
Sbjct: 321 VDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNI 380

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ ++S  +D  CK G +  A  + + +    L  +VVTYN ++   C   +MD+A  
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M  KG APD +++N L+ G  ++    +  +L   M  +
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 161/328 (49%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A     QM   N  P +  +N ++         +    ++ +M   GV  +V T +++
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LC    +     +L  + ++G +P+   +NTL++G C+ GR+  A E    + S G 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           +  V+++++++NG CK  +   A+    +M+    +P VV+Y+ +   L +   V  A  
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  M+  G++     Y + I G+C +G   +A  LF+ +     + D+ ++S L+D LC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G +  A  +F  + +  +  D+VTY+ +IH +C      ++  L  +M ++ + PD V
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            F+  +    +    S+   +++ M ER
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIER 413



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 1/303 (0%)

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
           +G  ++N  ++A   F +M+     P +  F+ ++  L +    +    +   M   GV 
Sbjct: 78  KGGSFSN-FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            + +    L++  C    V     +   +  +G K ++ +++ LING C    I  A+  
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              ++S+G +PTV T+  +  GL +I +   A     +M       +  +Y   ID LCK
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           N  + EA++LF  +R +     + +Y+ LI G+C SG+ K A  LF  +    +  DVVT
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           ++I++ ALC +G + +A  +F  M    + PD V +++L+ G  +++   +   LL+ M 
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376

Query: 403 ERN 405
            RN
Sbjct: 377 SRN 379


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/403 (35%), Positives = 215/403 (53%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      LK  G E +  T   +INGLC+ GH+  AL+  ++M   N      C  D  
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVT 219

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLCK+G V +A +L  QM  K I PD+ TYN +I G C  +   EA  L   M
Sbjct: 220 AYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 279

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+V TF+VI     K G +  A  +   M  +G+  +   Y++++   C+  ++
Sbjct: 280 MRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM 339

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M   GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ P +VT+NTL
Sbjct: 340 KDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTL 399

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +   A +LF  M +HG   D       +DGL K  +  EA+ LFR L  +  
Sbjct: 400 IGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNS 459

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI  YS +++G+C SG+L  A ELF  L    +  DVVTYNIMI+ LC +G +D A D
Sbjct: 460 DLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAED 519

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L + ME  G  PD   +N  + G +R  E SK  + L  M  +
Sbjct: 520 LLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGK 562



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 211/390 (54%), Gaps = 6/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP+++T++T++NGLC  G+   A+   + + +   E       D      II+GLCK 
Sbjct: 143 GVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYE------SDRYTRGAIINGLCKV 196

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A   L +M+++N N DV  YN+V+ G C      EA  LF +M  +G+QP++ T+
Sbjct: 197 GHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTY 256

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC   + +EA+ LL  M++ G+ P+   +N +   F  TG ++RAK +F  M  
Sbjct: 257 NCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGH 316

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           MG +H+V +YS +I  +C   +++ A+ ++  M+ KG  P +VTY +L  G  EI  + +
Sbjct: 317 MGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNK 376

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A     EM  +G+  +   + T I G CK G  V A ELF  +       D+++ + ++D
Sbjct: 377 AMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILD 436

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K      A  LF  L +     D++ Y+I+++ +C+ GK++ A +LF  + +KGV  
Sbjct: 437 GLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKI 496

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V +N ++ G  +        +LL +M+E
Sbjct: 497 DVVTYNIMINGLCKEGLLDDAEDLLMKMEE 526



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 172/371 (46%), Gaps = 15/371 (4%)

Query: 34  HTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           H +V +  F  + + N  FG+V K     YTT I              L+  M    + P
Sbjct: 67  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 111

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +V T+N VI   C  N +     +   M   GV+P++VTF+ I++ LC  G + +A + +
Sbjct: 112 NVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 171

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +  +G   + +    +++G C  G  + A      ME   C  +V +Y+ +++G CK+
Sbjct: 172 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKD 231

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +  A  L+S+M  KGI+P + TYN L  GL    + + A  L   M R G+  D   +
Sbjct: 232 GMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 291

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                   K G I  A  +F  +  +  E D+ +YS +I   C   ++K A E+F  + R
Sbjct: 292 NVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIR 351

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
              + ++VTY  +IH  C    M+KA     +M   G+ P+ V +NTL+ G  +  +   
Sbjct: 352 KGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVA 411

Query: 394 VVELLHRMDER 404
             EL   M + 
Sbjct: 412 AKELFFVMHKH 422



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 177/396 (44%), Gaps = 9/396 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K F C   V  ++ L   + +  H   A++L + M       GV  KP+   +  +I+ 
Sbjct: 72  MKPFPC---VKDFNLLFGIVAKMKHYTTAISLIKHM----SYIGV--KPNVPTHNIVINC 122

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC+         +L  M    + P +VT+ +++ G C   +  +A R    + D G + +
Sbjct: 123 LCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESD 182

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T   I++ LCK G    A   L+ M +     +   YN ++DG C  G V  A +LF 
Sbjct: 183 RYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFS 242

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G + ++F+Y+ LI+G C     + A  L + M+ KGI P V T+N +     +  
Sbjct: 243 QMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTG 302

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            + RA  +F  M   G+  D   Y + I   C    + +A+E+F  +    C  +I +Y+
Sbjct: 303 MISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYT 362

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI G C+   +  A      +    L  ++VT+N +I   C  GK   A +LF  M   
Sbjct: 363 SLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKH 422

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  PD      ++ G  + +  S+ + L   +++ N
Sbjct: 423 GQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 458



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 6/282 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A ++F+ +   G E +V+TYS++I   C       A+ +F+ MI         C P+ V
Sbjct: 306 RAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKG------CLPNIV 359

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G C+   ++KA   L +M +  ++P++VT+N++I GFC A     AK LF  M
Sbjct: 360 TYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVM 419

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P++ T ++I+D L K     EA  L   + ++    +  +Y+ +++G C +G++
Sbjct: 420 HKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKL 479

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ELF  + S G K +V +Y+I+ING CK   ++ A  L  +M   G  P   TYN  
Sbjct: 480 NDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVF 539

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             GL   +++ ++ K    M+  G  A+    +  I+    N
Sbjct: 540 VQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 581



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 116/245 (47%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D L     ++ A      M+ +   P    +N L            A  L   M  +G 
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K NV +++I+IN  C+        S+   M   G++P++VT+ T+  GL     V +A +
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIR 169

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
             D ++  G  +D +     I+GLCK G+   AL   + +    C LD+ +Y+ ++DGLC
Sbjct: 170 FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLC 229

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G +  AW+LF  +    +  D+ TYN +IH LC   +  +A  L  +M  KG+ PD  
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 289

Query: 377 AFNTL 381
            FN +
Sbjct: 290 TFNVI 294



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 111/202 (54%), Gaps = 6/202 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +PN++T++TLI G C+ G  + A  LF  M + +G+      PD      I+DGL K 
Sbjct: 388 GLDPNIVTWNTLIGGFCKAGKPVAAKELFFVM-HKHGQL-----PDLQTCAIILDGLFKC 441

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            F  +A  L  +++  N + D++ Y+ ++ G C +   N+A  LF  +  +GV+ +VVT+
Sbjct: 442 HFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTY 501

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++ LCK G +++A  LL  M + G  P+   YN  + G      ++++ +  + M+ 
Sbjct: 502 NIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKG 561

Query: 194 MGCKHNVFSYSILINGYCKNKE 215
            G + N  +  +LIN +  NKE
Sbjct: 562 KGFRANATTTKLLINYFSANKE 583


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 209/372 (56%), Gaps = 6/372 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  + A G +PNV +YS +I GLCR G T   + L E M        V C+PD V
Sbjct: 179 RAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV------VGCEPDVV 232

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TI+D LCK+  V++A  +  +MK   I P VVTY S+I G        EA  L  EM
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++V FSV++D +CK G++ EA  +L+ M ++GV P+   YNTLM+G+CL   V
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++F  M S G   +VFS+SIL+NGYCK K I+ A  L+ EM  +G+ P  V+YNTL
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A +LF +M  +G   +   Y   +D L K GY+ +A+ LFR +     
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ +IDG+CK G+ K A ELF  L    L  +       I  +C  G +D+AH 
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 362 LFLDMEAKGVAP 373
            F  ME    +P
Sbjct: 533 AFRQMEKDDCSP 544



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 198/394 (50%), Gaps = 6/394 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++  G   +V++ + LIN  CR  H     ++  ++I    + G+  +P+ + ++
Sbjct: 112 SLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKII----KLGL--EPNVITFS 165

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G C EG + +A EL   M  +   P+V +Y+ +I+G C    + E  +L   M   
Sbjct: 166 TLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVV 225

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+VV ++ I+D LCK+  + EA  +   M   G+ P    Y +L+ G    GR   A
Sbjct: 226 GCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEA 285

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M+      ++ ++S+LI+  CK  E+  A  +   M   G++P V TYNTL  G
Sbjct: 286 FGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V  A K+F+ M   G   D +++   ++G CK   I EA +LF  +       D
Sbjct: 346 YCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPD 405

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             SY+ LI GLC++ R   A ELF  +       ++VTY+I++  L   G +D+A  LF 
Sbjct: 406 TVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFR 465

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            ME  G+ PD V +N ++ G  +  +     EL 
Sbjct: 466 AMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF 499



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 190/364 (52%), Gaps = 6/364 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F  M+N N        P  V +  +   L +         L  QM+   I+ DV++
Sbjct: 75  ALSAFNHMVNTNP------LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              +I  FC     +    +  +++  G++PNV+TFS +++  C  GK+  A +L ++M+
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +PN   Y+ ++ G C  G+     +L   M+ +GC+ +V  Y+ +++  CK++ + 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ ++ +M   GI PTVVTY +L  GL  + + + AF L +EM+   +  D  A+   I
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D +CK G + EA  + +T+  +  E D+ +Y+ L++G C    +  A ++F  +     +
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV +++I+++  C   ++D+A  LF +M  +G+ PD V++NTL+ G  +     +  EL
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 398 LHRM 401
              M
Sbjct: 429 FKDM 432



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 6/196 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  + + G  P+V ++S L+NG C+      A  LF+EM +     G++  PD 
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR----GLI--PDT 406

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLC+     +A+EL   M      P++VTY+ ++         ++A  LF  
Sbjct: 407 VSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G++P++VT+++++D +CK GK ++A +L   +   G++PN +V    +DG C  G 
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526

Query: 181 VNRAKELFVSMESMGC 196
           ++ A + F  ME   C
Sbjct: 527 LDEAHKAFRQMEKDDC 542



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 90/188 (47%)

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + I  ALS ++ M++    P++V +  LF  L  +   +    L  +M+  G++ D  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              I+  C+  ++     +   +  L  E ++ ++S LI+G C  G++  A ELF  +  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                +V +Y+I+I  LC  GK  +   L   M+  G  PD V +NT++    ++   ++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 394 VVELLHRM 401
            V +  +M
Sbjct: 250 AVHIFCKM 257



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  + + G  PN++TYS L++ L + G+   A+ LF  M N         KPD 
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG------LKPDL 476

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDG+CK G    A+EL  ++  K + P+       I G C     +EA + F +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 121 MMDQGVQP 128
           M      P
Sbjct: 537 MEKDDCSP 544


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 228/399 (57%), Gaps = 17/399 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC  NV+T++TL+NGLCR G  + AL L + M+    +      PDAV Y TI++G+CK 
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQ------PDAVTYGTIVNGMCKL 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A  +L +M +  I  +VV Y++++   C   +  +A+ +F EM ++G+ PNV+T+
Sbjct: 59  GDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY 118

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C  GK  +A QLL  MI+  + P+   ++ L++ F   G+V+ A+EL+  M  
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI---------- 243
                   +YS +I+G+CK+  +E A  ++  M+SKG  P ++T NTL            
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238

Query: 244 -GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++  V  A  LF EM  +GV+ D     T + GLC+NG + +ALE+F+  +  K +
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  + + +I+G+CK  ++  AW+LF+SLP   +  DVVTYNI+I     +G   +A D+
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L+M  KG+ P  V +N+++ G  + N   +  +++  M
Sbjct: 359 YLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSM 397



 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 230/415 (55%), Gaps = 17/415 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A AL  ++   G +P+ +TY T++NG+C+ G T+ ALN+  +M           K + 
Sbjct: 27  LQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ------IKANV 80

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ I+D LCK+G   KA+ +  +M +K I P+V+TYN +I G+C     ++A++L  +
Sbjct: 81  VIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRD 140

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VVTFS +++   K GK+  A +L   M++  + P    Y++++DGFC   R
Sbjct: 141 MIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSR 200

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG---------ALSLYSEMLSK 229
           +  AK +F  M S GC  ++ + + LI+G C+ K   I G         A  L+ EM+S 
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ P +VT NTL  GL E  ++E+A ++F   Q+  +  DT      I+G+CK   + EA
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +LF +L +   E D+ +Y+ LI    K G    A +++  +    +I   VTYN M+  
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            C   ++++A  +   M ++G +PD V F+TL+ G  +       +EL   M +R
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 195/377 (51%), Gaps = 17/377 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +     +P+V+T+S LIN   + G    A  L+ EM+  N        P  +
Sbjct: 133 DAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN------IFPTTI 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI-----------RGFCYAND 110
            Y+++IDG CK   ++ AK +   M  K  +PD++T N++I            GFC   +
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            N A+ LF EM+  GV P++VT + ++  LC+NGK+E+A ++ ++  +  +  +    N 
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++G C   +V+ A +LF S+   G + +V +Y+ILI  + K      A  +Y EML KG
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           I P+ VTYN++  G  + +++E A ++ D M   G + D   + T I G CK G + + L
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ELF  +       D  +Y+ LI G CK G L  A ++F  +    +  D +T+  M+  L
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 351 CADGKMDKAHDLFLDME 367
           C   ++ K   +  D++
Sbjct: 487 CTKAELQKGLTMLEDLQ 503



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 158/308 (51%), Gaps = 52/308 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRT-----------GHTIVALNLFEEMINGNG 50
           +A  +F  + + GC P++IT +TLI+G CR            G+  VA +LF+EMI+ NG
Sbjct: 203 DAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMIS-NG 261

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
                  PD V   T++ GLC+ G ++KA E+    +   ++ D  T N +I G C  N 
Sbjct: 262 -----VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNK 316

Query: 111 SNEAKRLF-----------------------------------IEMMDQGVQPNVVTFSV 135
            +EA  LF                                   +EM+ +G+ P+ VT++ 
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D  CK  ++EEA Q+++ M+  G  P+   ++TL+ G+C  GRV+   ELF  M   G
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +  +Y+ LI+G+CK  ++ GA  ++ EM+S G+ P  +T+ ++  GL    ++++  
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496

Query: 256 KLFDEMQR 263
            + +++Q+
Sbjct: 497 TMLEDLQK 504



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 11/289 (3%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   NVVTF+ +M+ LC+ G++ +A  L++ M++ G +P+A  Y T+++G C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  +   M+    K NV  YS +++  CK+     A ++++EM  KGI P V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G     +   A +L  +M    +  D   +   I+   K G +  A EL+R +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI-----------MIHA 349
                 +YS +IDG CK  RL+ A  +F  +       D++T N            +IH 
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            C  G ++ A DLF +M + GV+PD V  NTL+ G   N +  K +E+ 
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 87/180 (48%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+  G    VVT+ TL  GL    +V +A  L D M   G   D   Y T ++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            V AL + R +   + + ++  YS ++D LCK G    A  +F  +    +  +V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           MI   C+ GK   A  L  DM  + + PD V F+ L+   ++  + S   EL   M  RN
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  261 bits (666), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 234/430 (54%), Gaps = 26/430 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG--HTIVAL----------NLFEEMINGN 49
           E   +  K+ A G +P+  TY +L+N LC     H+ + L          ++F    +  
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319

Query: 50  GEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
            + G++ K              P+ V Y  +ID LCK G VD A+    QM ++ + P++
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V +NS++ G C  +    A+ L  EM+DQG+ PN V F+ ++  LC  G++ E  +L++L
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M  +GVRP+AF Y  L+ G+CL GR + A+++F  M S+G      +Y+ L++GYC    
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A  L+ EML KG+ P VVTYNT+  GLF+  +   A +L+  M   G   D + Y  
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GLCK+  + EA ++F++L     +L+I +++ +I  L K GR + A +LF ++P   
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L+ +VVTY ++   L  +G +++   LF  ME  G AP+    N L+   +   + S+  
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679

Query: 396 ELLHRMDERN 405
             L ++DERN
Sbjct: 680 AYLSKLDERN 689



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 204/396 (51%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC P+ ++YS L+ G C       AL L   M N +G     C P+ V YTT
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR---SCPPNVVTYTT 212

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDGLCK    D+A+ +  QM D  + P+  TYN +I G+       E  ++  +M  +G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+  T+  +++ LC    + E    L+LM++ G+ P+  ++N     +   G +++A 
Sbjct: 273 LKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F  M   G   NV +Y  LI+  CK   ++ A   +++M+++G+ P +V +N+L  GL
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             + + ERA +L  EM   G+  +   + T I  LC  G ++E   L   +  +    D 
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY+ LI G C +GR   A ++F  +    L    VTYN ++H  C+  ++D A+ LF +
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  KGV P  V +NT++ G  +    S+  EL   M
Sbjct: 510 MLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 36/312 (11%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T+S+++  LC+ G+++ +     L+++ G R N  V N L+ G C   RV  A 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS---KGIKPTVVTYNTL 241
           ++ +  M  +GC  +  SYSIL+ G+C     E AL L   M +   +   P VVTY T+
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +    +RA  +F +M  +GV  +   Y   I G    G   E +++   +     
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 302 ELDIRSYSCLIDGLC--------------------------------KSGRLKIAWELFH 329
           + D  +Y  L++ LC                                K G +  A ++F+
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L  +VV Y  +I ALC  G++D A   F  M  +GV P+ V FN+L+ G    +
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393

Query: 390 ETSKVVELLHRM 401
           +  +  EL++ M
Sbjct: 394 KWERAEELVYEM 405



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 6/292 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME   L   ++  G  P+  +Y+ LI+G C  G T  A  +F+ M++      +   P  
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS------IGLSPTE 484

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G C    +D A  L  +M  K + P VVTYN+++ G       +EAK L++ 
Sbjct: 485 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 544

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ T+++I++ LCK+  ++EA ++ + +   G++ N   +  ++      GR
Sbjct: 545 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 604

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   NV +Y ++     +   +E   SL+S M   G  P     N 
Sbjct: 605 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 664

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           L   L     + RA     ++     + +       I     + Y   A  L
Sbjct: 665 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 21/310 (6%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS-----------QLLELMIQ-- 158
           ++A +LF E++      +VV F+ I++ + +  +                 L   M++  
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVREC 90

Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            I V PN   Y+ L+   C  GR+  +   F  +   G + N    + L+ G C  K + 
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 218 GALS-LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR-HGVA--ADTWAY 273
            A+  L   M   G  P  V+Y+ L  G    ++ E A +L   M   HG +   +   Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            T IDGLCK      A  +F+ +     + +  +Y+CLI G    G+ K   ++   +  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             L  D  TY  +++ LCA  +M    DL ++    G++PD   FN       +     K
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 394 VVELLHRMDE 403
            +++ ++M +
Sbjct: 328 AMDIFNKMRQ 337



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 7/192 (3%)

Query: 220 LSLYSEML---SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +SL++ M+   S  + P   TY+ L   L  + +++ +F  F  + + G   +       
Sbjct: 80  VSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQL 139

Query: 277 IDGLCKNGYIVEALE-LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG- 334
           + GLC    + EA++ L + +  L C  D  SYS L+ G C   R + A EL   +    
Sbjct: 140 LKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDH 199

Query: 335 --VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 +VVTY  +I  LC     D+A  +F  M   GV P+   +N L+ G +   +  
Sbjct: 200 GRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWK 259

Query: 393 KVVELLHRMDER 404
           +VV++L +M  R
Sbjct: 260 EVVQMLEKMSAR 271



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE-----------ALELFRTLRIL 299
           ++ A KLFDE+  H   A   A+   ++ + +                  + LF  + + 
Sbjct: 30  LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRM-VR 88

Query: 300 KCELDIR----SYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADG 354
           +C + +     +YS LI  LC+ GRLK ++  F   L  G  + D+V  N ++  LC   
Sbjct: 89  ECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVI-NQLLKGLCDGK 147

Query: 355 KMDKAHDLFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++ +A D+ L  M   G  PD V+++ L+ G    N   + +ELL  M
Sbjct: 148 RVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  260 bits (665), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/404 (34%), Positives = 223/404 (55%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  +K+  C P+++TY+TL++GL RTG    A+ LF+EM++           D +
Sbjct: 28  RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH-------DVI 80

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ GLC+ G ++ A E   +M D+  +P+V+TY+ +I G C AN  ++A  L   M
Sbjct: 81  SFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESM 139

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V+T+++++D LCK  K+  A ++L  M+  G  PN   YN+L+ G C   RV
Sbjct: 140 KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRV 199

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   GC  NV +Y  LI+G CK   ++ A ++ ++M+ KG  P ++ YN L
Sbjct: 200 SDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 259

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  QV+ +  L       G+  D   Y + I GLC++  + EA  L   ++   C
Sbjct: 260 INGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGC 319

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  YS LIDGLCK+G++  A++L+  +      ADVVTY+ +I  LC  G++D+AH 
Sbjct: 320 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHL 379

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   M   G  P  + +N+L+ G    N   + +EL+  M+  N
Sbjct: 380 LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 423



 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/399 (36%), Positives = 215/399 (53%), Gaps = 7/399 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E A  F +     C PNVITYS LI+GLC+      A+ L E M    G     C PD 
Sbjct: 95  IETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM-KARG-----CSPDV 148

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT ++DGLCKE  V  A E+L +M D    P++VTYNS++ G C A   ++A  L  +
Sbjct: 149 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PNVVT+  ++D LCK G++++A  +L  MI  G  P+  +YN L++G C   +
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ +  L     S G K +V +YS +I G C++  ++ A  L   + S+G  P V+ Y+T
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +V+ AF L++ M   G  AD   Y T IDGLCK G + EA  L   +  + 
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                 +Y+ LI GLC    L  A EL   + R       VTYNI+IH +C   ++D A 
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 361 -DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            D F +M   GV PD + ++ L+ G  ++ +  ++  L+
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 487



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 190/346 (54%), Gaps = 2/346 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+P+ V Y ++IDGLCK    D+A+EL   MK    +P +VTYN+++ G         A 
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM+D+    +V++F++++  LC+ GK+E A +    M      PN   Y+ L+DG 
Sbjct: 66  ALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGL 123

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   RV++A EL  SM++ GC  +V +Y+IL++G CK  ++  A  +  EML  G  P +
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTYN+L  GL    +V  A  L  +M   G   +   Y T IDGLCK G + +A  +   
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       D+  Y+ LI+GLCK+ ++  +  L      G +  DVVTY+ +I+ LC   +
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +D+A  L L ++++G  PD + ++TL+ G  +  +  +  +L   M
Sbjct: 304 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 153/280 (54%), Gaps = 2/280 (0%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G +PNVVT++ ++D LCKN + + A +L E M  +   P+   YNTL+DG   TG+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + RA  LF  M      H+V S++IL+ G C+  +IE AL  + +M  +   P V+TY+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + ++V +A +L + M+  G + D   Y   +DGLCK   +  A E+ R +    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ +Y+ L+ GLC++ R+  A  L   +       +VVTY  +I  LC  G++  A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +  DM  KG  PD + +N L+ G  + ++  + + LL R
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 278



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC+ NV +Y+ LI+G CKN E + A  L+  M S    P++VTYNTL  GLF   +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +ERA  LF EM     + D  ++   + GLC+ G I  ALE FR +   +C  ++ +YS 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LIDGLCK+ R+  A EL  S+       DV+TY I++  LC + K+  A ++  +M   G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P+ V +N+L+ G  R    S  + L+  M  R
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 212


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  260 bits (664), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 219/404 (54%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            AA     L+  G + N  TY  +INGLC+ G T  A+ L+ E I G       C  D V
Sbjct: 159 RAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAI-LYLEKIKGRN-----CDLDVV 212

Query: 62  I-YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           I Y+TI+D LCK+G V +A  L   M  K I PD+V YNS+I G C      EA  L   
Sbjct: 213 IAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGN 272

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM +G+ PNV TF+V++D  CK+G +  A  ++  M+ +GV P+   YN+++ G CL  +
Sbjct: 273 MMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQ 332

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++F  M   G   N+ +YS LI+G+CK K I  AL L  EM++ G+ P VVT++T
Sbjct: 333 MGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWST 392

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  + E A +LF  M  H    +       +DGL K  +  EA+ LFR +  + 
Sbjct: 393 LIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL++  Y+ ++DG+C  G+L  A ELF  LP   +  DVV Y  MI  LC +G +D A 
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +L + ME  G  P+   +N  + G ++  + S+  + L  M  +
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGK 556



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 188/364 (51%), Gaps = 7/364 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+ + + G +P+++ Y++LI+GLC  G    A  L   M+      G++  P+  
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRK----GIM--PNVQ 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++D  CK+G + +AK ++  M    + PDVVTYNSVI G C  +   +A ++F  M
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+VT+S ++   CK   + +A  LL  M+  G+ P+   ++TL+ GFC  G+ 
Sbjct: 344 IHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKP 403

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKELF +M       N+ + +I+++G  K +    A+SL+ EM    ++  VV YN +
Sbjct: 404 EAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIV 463

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+    ++  A +LF  +   G+  D  AY T I GLCK G + +A  L   +    C
Sbjct: 464 LDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGC 523

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+  + GL +   +  + +    +    L AD  T  ++I    A+ K + A  
Sbjct: 524 LPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSAN-KENSALH 582

Query: 362 LFLD 365
           +FL 
Sbjct: 583 VFLQ 586



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 175/369 (47%), Gaps = 7/369 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+ F +M+  N        P    +T +   + K         L+  +    I PDV T
Sbjct: 55  ALSFFHKMVVMNP------LPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYT 108

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              +I   C+ N +     +   M   GV P VVTF+ +++ LC  G +  A++  + + 
Sbjct: 109 LTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLE 168

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV-FSYSILINGYCKNKEI 216
            +G + N++ Y  +++G C  G  + A      ++   C  +V  +YS +++  CK+  +
Sbjct: 169 DMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMV 228

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL+L+S M SKGI+P +V YN+L  GL    + + A  L   M R G+  +   +   
Sbjct: 229 CEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVL 288

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +D  CK+G I  A  +   +  +  E D+ +Y+ +I G C   ++  A ++F  +     
Sbjct: 289 VDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGF 348

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + ++VTY+ +IH  C    ++KA  L  +M   G+ PD V ++TL+ G  +  +     E
Sbjct: 349 LPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKE 408

Query: 397 LLHRMDERN 405
           L   M E +
Sbjct: 409 LFCTMHEHD 417



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F K+      P    ++ L   + +  H    ++L + +      + +  KPD   
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHI------YSLGIKPDVYT 108

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            T II+ LC          +L  M    ++P VVT+ ++I G C   +   A R    + 
Sbjct: 109 LTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLE 168

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV-YNTLMDGFCLTGRV 181
           D G Q N  T+  I++ LCK G    A   LE +       +  + Y+T+MD  C  G V
Sbjct: 169 DMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMV 228

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M S G + ++ +Y+ LI+G C     + A +L   M+ KGI P V T+N L
Sbjct: 229 CEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVL 288

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   + RA  +   M   GV  D   Y + I G C    + +A+++F  L I K 
Sbjct: 289 VDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE-LMIHKG 347

Query: 302 EL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            L ++ +YS LI G CK+  +  A  L   +    L  DVVT++ +I   C  GK + A 
Sbjct: 348 FLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAK 407

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +LF  M      P+      ++ G  +    S+ + L   M++ N
Sbjct: 408 ELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 36/224 (16%)

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K  E ALS + +M+     P    +  LF  + ++        L   +   G+  D +  
Sbjct: 50  KSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTL 109

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-- 331
              I+ LC   + V    +   +  +  +  + +++ LI+GLC  G +  A     SL  
Sbjct: 110 TIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLED 169

Query: 332 --------PRGVLIAD--------------------------VVTYNIMIHALCADGKMD 357
                     G +I                            V+ Y+ ++ +LC DG + 
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVC 229

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A +LF  M +KG+ PD VA+N+L+ G        +   LL  M
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 216/370 (58%), Gaps = 6/370 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +L A G + + ++Y TLINGLC+TG T     L  ++       G   KPD V
Sbjct: 145 KALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLE------GHSVKPDVV 198

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TII+ LCK   +  A ++  +M  K I+PDVVTY ++I GFC      EA  L  EM
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV TF++++D L K GKM+EA  LL +M++  ++P+ F YN+L+DG+ L   V
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEV 318

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F SM   G   +V  Y+ +ING CK K ++ A+SL+ EM  K + P +VTYN+L
Sbjct: 319 KHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL 378

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + H +ERA  L   M+  G+  D ++Y   +DGLCK+G + +A E+F+ L     
Sbjct: 379 IDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGY 438

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L++ +Y+ LI+ LCK+G    A +L   +     + D VT++I+I AL    + DKA  
Sbjct: 439 HLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEK 498

Query: 362 LFLDMEAKGV 371
           +  +M A+G+
Sbjct: 499 ILREMIARGL 508



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 211/402 (52%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++F  +   G  PN IT +TLI GLC  G    AL   ++++    +       D V 
Sbjct: 111 AFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL------DQVS 164

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK G       LL +++  ++ PDVV YN++I   C      +A  ++ EM+
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+VVT++ ++   C  G ++EA  LL  M    + PN   +N L+D     G++ 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK L   M     K +VF+Y+ LI+GY    E++ A  ++  M  +G+ P V  Y  + 
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   V+ A  LF+EM+   +  D   Y + IDGLCKN ++  A+ L + ++    +
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ SY+ L+DGLCKSGRL+ A E+F  L       +V  Y ++I+ LC  G  D+A DL
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ME KG  PD V F+ ++      +E  K  ++L  M  R
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIAR 506



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 171/347 (49%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L           L  Q +   I PD+ T + +I  FC+      A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G  PN +T + ++  LC  G++++A    + ++  G + +   Y TL++G C 
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           TG       L   +E    K +V  Y+ +IN  CKNK +  A  +YSEM+ KGI P VVT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G   +  ++ AF L +EM+   +  +   +   ID L K G + EA  L   + 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ +Y+ LIDG      +K A  +F+S+ +  +  DV  Y  MI+ LC    +D
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  LF +M+ K + PD V +N+L+ G  +N+   + + L  RM E+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQ 401



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%)

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           LM+ +   P  F +N ++              LF   E  G   ++ + SILIN +C   
Sbjct: 47  LMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 106

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            I  A S+++ +L +G  P  +T NTL  GL    ++++A    D++   G   D  +Y 
Sbjct: 107 HITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYG 166

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I+GLCK G       L R L     + D+  Y+ +I+ LCK+  L  A +++  +   
Sbjct: 167 TLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 226

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            +  DVVTY  +IH  C  G + +A  L  +M+ K + P+   FN L+
Sbjct: 227 GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 71/170 (41%)

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  +   TL       H    A   F+ M        T+ +   +  L  N +    + L
Sbjct: 20  PIAIPTATLHSQPHSHHHHHHAVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISL 79

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F+         D+ + S LI+  C    + +A+ +F ++ +     + +T N +I  LC 
Sbjct: 80  FKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCF 139

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            G++ KA      + A+G   D V++ TL+ G  +  ET  V  LL +++
Sbjct: 140 RGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLE 189


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/434 (33%), Positives = 234/434 (53%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE------FGVV 55
           EA   F  +   G +P+V  Y+ L++G    G  +  ++ F +++ GNG       F ++
Sbjct: 284 EARLFFDSMFRKGIKPDVAIYAILLHGYATKG-ALSEMHSFLDLMVGNGVSPNRRIFNIM 342

Query: 56  ------------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                     PD V +  +ID LCK G VD A     QM ++ +
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P++  ++S++ G C      +A+ LF E++DQG+  + V F+ +M  LC  G++ EA +
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L++LMI++GVRPN   YNTL+ G CLTGR++ A +L   M S G K N F+Y+IL+ GYC
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K + ++ A SL+ EML KG+ P V TYNT+  GLF+  +   A +L+  M       D +
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   ++GLCKN ++ EA ++FR L     +LD  +++ +I  L K GR + A +LF ++
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ DVVTY ++   L  +G + +   LF  ME  G AP+    N L+   +   + 
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702

Query: 392 SKVVELLHRMDERN 405
           S+    L+++DE+N
Sbjct: 703 SRAGVYLYKLDEKN 716



 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 41/431 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++  FGC P+V+ Y+T+ING  R G    A NLF EM++          P+ V YTT
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG------IPPNVVTYTT 201

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDGLCK   VD+AK +  QM D+ + PD  TYN +I G+       E  ++  EM   G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261

Query: 126 VQPNVVTFSVIMDELCKNGKMEEAS----------------------------------- 150
           ++P+ +T+++++D LCKNG+  EA                                    
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
             L+LM+  GV PN  ++N +   +     +  A  +F  M   G   +V S+  LI+  
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   ++ A+  +++M+++G+ P +  +++L  GL  + + E+A +LF E+   G+  D 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             + T +  LC  G ++EA  L   +  +    ++ SY+ L+ G C +GR+  A +L   
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L  +  TY I++   C   ++D A+ LF +M  KGV P    +NT++ G  +   
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 391 TSKVVELLHRM 401
            S+  EL   M
Sbjct: 562 FSEANELYLNM 572



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 207/411 (50%), Gaps = 21/411 (5%)

Query: 5   ALFTKLK---AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP--- 58
           +LFT++    +    PN  TYS LI   CR G           + +G   FG++ K    
Sbjct: 73  SLFTRMARECSSKVAPNACTYSILIGCFCRMGR----------LEHGFAAFGLILKTGWR 122

Query: 59  -DAVIYTTIIDGLCKEGFVDKAKE-LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            + ++ + ++ GLC    VD+A + LLL+M +    PDVV YN+VI GF       +A  
Sbjct: 123 VNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYN 182

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF+EMMDQG+ PNVVT++ ++D LCK   ++ A  + + MI  GV+P+   YN L+ G+ 
Sbjct: 183 LFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYL 242

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            TG+     ++   M + G + +  +Y++L++  CKN     A   +  M  KGIKP V 
Sbjct: 243 STGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVA 302

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            Y  L  G      +       D M  +GV+ +   +        K   I EA+ +F  +
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      D+ S+  LID LCK GR+  A   F+ +    +  ++  ++ +++ LC  GK 
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKW 422

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCI---RNNETSKVVELLHRMDER 404
           +KA +LF ++  +G+  D V FNTLM       R  E  ++++L+ R+  R
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVR 473



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 217/462 (46%), Gaps = 66/462 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEFGVVC 56
           +A  LF ++   G  PNV+TY+T+I+GLC+      A  +F++MI+      NG +  + 
Sbjct: 179 KAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLI 238

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +PD + Y  ++D LCK G   +A+     M  K I 
Sbjct: 239 HGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIK 298

Query: 93  PDVVTYNSVIRG--------------------------------FC-YANDS--NEAKRL 117
           PDV  Y  ++ G                                FC YA  +   EA  +
Sbjct: 299 PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI 358

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M  QG+ P+VV+F  ++D LCK G++++A      MI  GV PN FV+++L+ G C 
Sbjct: 359 FNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCT 418

Query: 178 TGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            G+  +A+ELF  +   G C   VF  +++ N  C    +  A  L   M+  G++P V+
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCN-LCNEGRVMEAQRLIDLMIRVGVRPNVI 477

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +YNTL  G     +++ A KL D M  +G+  + + Y   + G CK   + +A  LFR +
Sbjct: 478 SYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            +      + +Y+ ++ GL ++GR   A EL+ ++       D+ TYNI+++ LC +  +
Sbjct: 538 LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFV 597

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+A  +F  + +K    D V FN ++   ++       ++L 
Sbjct: 598 DEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLF 639



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L   +   G  PNVI+Y+TL+ G C TG    A  L + M++ NG      KP+ 
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS-NG-----LKPNE 511

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT ++ G CK   VD A  L  +M  K + P V TYN+++ G       +EA  L++ 
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   + ++ T+++I++ LCKN  ++EA ++   +     + ++  +N ++      GR
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     +   +     L+S M   G  P     N 
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNA 691

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 692 LVRRLLHRGDISRA 705



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 6/221 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G  P V TY+T+++GL +TG    A  L+  MIN         K D  
Sbjct: 529 DAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR------TKCDIY 582

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I++GLCK  FVD+A ++  ++  K+   D VT+N +I          +A  LF  +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+VVT+ +I + L + G + E   L   M + G  PN+ + N L+      G +
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           +RA      ++         + S+LI+ Y + +    A SL
Sbjct: 703 SRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSL 743



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +L +   + + +T++ +I  L + G    A++LF  +      +G+V  PD V
Sbjct: 599 EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI----SAYGLV--PDVV 652

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I + L +EG + +   L   M+     P+    N+++R   +  D + A     ++
Sbjct: 653 TYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKL 712

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
            ++       T S+++    +      A  L E
Sbjct: 713 DEKNFSLEASTTSMLISLYSRGEYQPHAKSLPE 745


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/433 (33%), Positives = 240/433 (55%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVAL----------NLFEEMI 46
           EA  +F  L   G +P+V  Y  L++G    G     H+ + L          ++F  M 
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           N   +  ++                P  V Y  +ID LCK G VD A     QM ++ + 
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+  ++S++ G C  +   +A++LF E++DQG++ N   F+++M  LC+ G++ EA +L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++LM+++ VRP+   YNTL+DG CLTGR++ A +L   M S+G K + F+Y+ L++GYCK
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCK 529

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + I+ A SL+ EML KG+ P VVTYNT+  GLF+I +   A +L+  M  +    D + 
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT 589

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GLC+N ++ EA ++F++L     +LDI + + +I  L K GR + A +LF ++ 
Sbjct: 590 YTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATIS 649

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY ++   L  +G +++  +LF  ME  G AP+    N L+   +   +  
Sbjct: 650 AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIG 709

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 710 RAGVYLSKLDEKN 722



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 206/415 (49%), Gaps = 40/415 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDAVIYT 64
           L  ++  FGC  NVI+Y+ L+ GLC       AL L   M + G+G       P+ V YT
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH----TPNVVTYT 206

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDGLCK   VD+AK +   M DK + P+  TY  +I G+       E  ++  EM   
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTH 266

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR---- 180
           G+QP+ V ++V++D LCKNG+  EA  + + +I+ G++P+  +Y  L+ G+   G     
Sbjct: 267 GLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEM 326

Query: 181 -------------------------------VNRAKELFVSMESMGCKHNVFSYSILING 209
                                          ++ A  +F  M        V +Y  LI+ 
Sbjct: 327 HSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA 386

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A+  +++M+++G+ P +  +++L  GL  + + E+A KLF E+   G+  +
Sbjct: 387 LCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLN 446

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              +   +  LC+ G ++EA  L   +  +    D+ SY+ L+DG C +GR+  A +L  
Sbjct: 447 AAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +    L  D  TYN ++H  C   ++D A+ LF +M  KG+ P  V +NT++ G
Sbjct: 507 VMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 194/400 (48%), Gaps = 22/400 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-----DAVIYTTIIDGLC 71
           P+  TY+ LI   CR G           + +G   FG++ K      + VI+  ++ GLC
Sbjct: 90  PSSCTYTILIGCFCRMG----------RLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 72  KEGFVDKAKELLL-QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG---VQ 127
               VD+A ++LL +M +     +V++YN +++G C    + EA  L   M D G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PNVVT++ ++D LCK   ++ A  + + MI  GVRPN   Y  L+ G+  TG+     ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M + G + +   Y++L++  CKN     A +++  ++ KGIKP V  Y  L  G   
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +       D M R+GV+ D   +    +   K   I EA+ +F  +R       + +
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y  LID LCK GR+  A   F+ +    +  D+  ++ +++ LC   K +KA  LF ++ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 368 AKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLHRMDER 404
            +G+  +   FN LM    R     E  ++++L+ R+D R
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR 479



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 164/353 (46%), Gaps = 15/353 (4%)

Query: 66  IIDGLCKEGFV--DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK---RLFIE 120
           +I G  + G +  D A +L  +M        V T+N ++     A  S+ ++    LF  
Sbjct: 20  VIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNR 79

Query: 121 MMDQ---GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR-PNAFVYNTLMDGFC 176
           M+ +    V P+  T+++++   C+ G+++       L+++ G    N  ++  L+ G C
Sbjct: 80  MIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 177 LTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IK 232
              RV+ A ++ +  M   GC  NV SY+IL+ G C  K  E AL L   M   G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTY T+  GL +   V+RA  +F  M   GV  +   Y   I G    G   E +++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + +     + D   Y+ L+D LCK+GR   A  +F SL R  +   V  Y I++H    
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 353 DGKMDKAHDLFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G + + H  FLD+  + GV+PD   FN +     +     + + +  +M ++
Sbjct: 320 EGALSEMHS-FLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L   +      P+VI+Y+TL++G C TG    A  L + M++      +  KPD 
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS------IGLKPDE 517

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G CK   +D A  L  +M  K + P VVTYN+++ G        EAK L++ 
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   + ++ T+++I++ LC+N  ++EA ++ + +    ++ + F  N ++      GR
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGR 637

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P     N 
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 698 LVRWLLHRGDIGRA 711



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 6/221 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G  P V+TY+T+++GL + G    A  L+  MIN         K D  
Sbjct: 535 DAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR------KCDIY 588

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT I++GLC+  FVD+A ++   +  K++  D+ T N +I          +A  LF  +
Sbjct: 589 TYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATI 648

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+V T+ +I + L K G +EE  +L   M + G  PN+ + N L+      G +
Sbjct: 649 SAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            RA      ++         + S+LI+ Y + +  + A SL
Sbjct: 709 GRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/434 (33%), Positives = 240/434 (55%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE------FGVV 55
           EA  +F  +   G +PNV  Y  L++G    G ++  ++ F +++ GNG       F ++
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEG-SLSEMHSFLDLMVGNGVSPDHHIFNIM 348

Query: 56  ------------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                     P+ V Y  +ID LCK G VD A     QM D+ +
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD+  ++S++ G C  +   +A+ LF E++DQG++ + V F+ +M  LC+ G++ EA +
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQR 468

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L++LM+++GVRP+   YNTL+DG CLTGR++ A +L   + S+G K +  +Y+ L++GYC
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K + I+ A SL+ EML KG+ P VVTYNT+  GLF+  +   A +L+  M       + +
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   I+GLCKN ++ EA ++F +L     +LDI + + +I  L K GR + A +LF ++
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ DV TY ++   L  +G +++  +LF  ME  G AP+    N L+   +   + 
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708

Query: 392 SKVVELLHRMDERN 405
           ++    L ++DE+N
Sbjct: 709 NRAGAYLSKLDEKN 722



 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 214/432 (49%), Gaps = 40/432 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDAVIYT 64
           L  ++  FGC P+V +YS L+ G C       AL L   M + G+G       P+ V YT
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSH----TPNVVTYT 206

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDGLCK   VD+AK +   M DK + P+  TY  +I G+       E  ++  EM   
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR---- 180
           G+QP+   ++V++D LCKNG+  EA  + + +I+ G++PN  +Y  L+ G+   G     
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEM 326

Query: 181 -------------------------------VNRAKELFVSMESMGCKHNVFSYSILING 209
                                          ++ A  +F  M       N+ +Y  LI+ 
Sbjct: 327 HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A+  +++M+ +G+ P +  +++L  GL  + + E+A +LF E+   G+  D
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  + T +  LC+ G ++EA  L   +  +    D+ SY+ L+DG C +GR+  A +L  
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    L  D VTYN ++H  C   ++D A+ LF +M  KG+ PD V +NT++ G  +  
Sbjct: 507 VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 566

Query: 390 ETSKVVELLHRM 401
             S+  EL   M
Sbjct: 567 RFSEAKELYLSM 578



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 198/400 (49%), Gaps = 22/400 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-----DAVIYTTIIDGLC 71
           P+  TY+ LI   CR G           + +G   FG++ K      D VI++ ++ GLC
Sbjct: 90  PSSFTYTILIGCFCRMG----------RLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLC 139

Query: 72  KEGFVDKAKELLL-QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG---VQ 127
               VD+A ++LL +M +    PDV +Y+ +++GFC    + EA  L   M D G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHT 199

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PNVVT++ ++D LCK   ++ A  + + MI  GVRPN   Y  L+ G+   G+     ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M + G + + + Y++L++  CKN     A +++  ++ KGIKP V  Y  L  G   
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +       D M  +GV+ D   +        K   I EA+ +F  +R  +   +I +
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y  LID LCK GR+  A   F+ +    +  D+  ++ +++ LC   K +KA +LF ++ 
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439

Query: 368 AKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLHRMDER 404
            +G+  D V FNTLM    R     E  ++++L+ R+  R
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR 479



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 187/381 (49%), Gaps = 41/381 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K++     PN++TY  LI+ LC+ G    A+  F +MI+          PD  
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG------MTPDIF 413

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++++++ GLC     +KA+EL  ++ D+ I  D V +N+++   C      EA+RL   M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLM 473

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           +  GV+P+V++++ ++D  C  G+++EA++LL++++ IG++P+   YNTL+ G+C     
Sbjct: 474 LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRI 533

Query: 177 ------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                          TGR + AKEL++SM +   + N+++Y+I+
Sbjct: 534 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 593

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING CKN  ++ A  ++  + SK ++  + T N +   L +  + E A  LF  +  +G+
Sbjct: 594 INGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGL 653

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y    + L K G + E  ELF  +       + R  + L+  L   G +  A  
Sbjct: 654 VPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGA 713

Query: 327 LFHSLPRGVLIADVVTYNIMI 347
               L       +  T +++I
Sbjct: 714 YLSKLDEKNFSLEASTTSMLI 734



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 5/284 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN-AFVYNTLMDGFCLTGRVNRA 184
           V P+  T+++++   C+ G+++       L+++ G R N   +++ L+ G C   RV+ A
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 185 KELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVVTYNT 240
            ++ +  M   GC  +VFSYSIL+ G+C  K  E AL L S M   G     P VVTY T
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +   V+RA  +F  M   GV  +   Y   I G    G   E +++ + +    
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D   Y+ L+D LCK+GR   A  +F S+ R  +  +V  Y I++H    +G + + H
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                M   GV+PD   FN +     +     + + +  +M ++
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQ 371



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L   +   G  P+VI+Y+TL++G C TG    A  L + +++      +  KPD 
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS------IGLKPDK 517

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G CK   +D A  L  +M  K + PDVVTYN+++ G       +EAK L++ 
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   Q N+ T+++I++ LCKN  ++EA ++   +    ++ + F  N ++      GR
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P     N 
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 698 LVRWLLHRGDINRA 711



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 6/221 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G  P+V+TY+T+++GL +TG    A  L+  MIN   +  +       
Sbjct: 535 DAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY------ 588

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+GLCK  FVD+A ++   +  K++  D+ T N +I          +A  LF  +
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+V T+ +I + L K G +EE  +L   M + G  PN+ + N L+      G +
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           NRA      ++         + S+LI+ Y + +  + A SL
Sbjct: 709 NRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  L +   + ++ T + +I  L + G    A++LF  +      +G+V  PD  
Sbjct: 605 EAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI----SAYGLV--PDVE 658

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I + L KEG +++  EL   M++    P+    N+++R   +  D N A     ++
Sbjct: 659 TYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKL 718

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
            ++       T S+++    +    + A  L E
Sbjct: 719 DEKNFSLEASTTSMLISIYSRGEYQQLAKSLPE 751


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/393 (36%), Positives = 222/393 (56%), Gaps = 20/393 (5%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G + N ++Y TLI+GLC+ G T  A+ +   +       G++ +P+ V+Y+TII  LC
Sbjct: 77  AKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNI------DGLLVQPNVVMYSTIIYSLC 130

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K+  V  A +L  QM  K I+PDV+TYN+++ G        EA  LF +M+ + ++P++ 
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF++++D LCK G+M++A  +L +MI+  V P+   YN+LMDG+ L  + N+A  +F +M
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   +V SYS++ING CK K ++ A++L  EM SK + P  VTY++L  GL +  ++
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A+ L +EM   G  AD   Y + +D LCKN  + +A+ L   ++    + DI +Y+ L
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +DGLCK+GRLK A E++  L              +I     D   DKA  L   ME  G 
Sbjct: 371 VDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGC 416

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            P+ V F  L+     N+   K VELL  M  R
Sbjct: 417 TPNPVTFEILIRALFENDMNDKAVELLREMIAR 449



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 174/354 (49%), Gaps = 41/354 (11%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYA---------------NDSNEAKRLFIEMMDQG---- 125
           QM+ + I  D+V  N ++  FC+                +D   AK   +  +  G    
Sbjct: 33  QMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLID 92

Query: 126 ----------------------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
                                 VQPNVV +S I+  LCK+  + +A  L   M+   + P
Sbjct: 93  GLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISP 152

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +   YNTLM G  + GR+  A  LF  M     K ++++++IL++G CK  E++ A ++ 
Sbjct: 153 DVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVL 212

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           + M+ + + P V+TYN+L  G F + Q  +A  +F+ M R GV  D  +Y   I+GLCK 
Sbjct: 213 AVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKT 272

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + EA+ L + +       +  +YS LIDGL KSGR+  AW+L + +      ADV+TY
Sbjct: 273 KMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITY 332

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           N ++ ALC + ++DKA  L   ++ +G+ PD   +  L+ G  +N       E+
Sbjct: 333 NSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEV 386



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 189/371 (50%), Gaps = 55/371 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L++++      P+VITY+TL+ G    G    A+ LF +M+  N       KPD 
Sbjct: 136 IDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN------IKPDI 189

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  ++DGLCKEG + KA+ +L  M  ++++PDV+TYNS++ G+      N+A  +F  
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNT 249

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV P+V ++SV+++ LCK   ++EA  LL+ M    + PN   Y++L+DG   +GR
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +L   M + G   +V +Y+ L++  CKN +++ A++L +++  +GI+P + TY  
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L                                   +DGLCKNG + +A E+++ L I  
Sbjct: 370 L-----------------------------------VDGLCKNGRLKDAQEVYQILLIKG 394

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             LD      L D          A  L   +       + VT+ I+I AL  +   DKA 
Sbjct: 395 YHLD-----SLFDK---------ALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAV 440

Query: 361 DLFLDMEAKGV 371
           +L  +M A+G+
Sbjct: 441 ELLREMIARGL 451



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 166/321 (51%), Gaps = 6/321 (1%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD------ELCKN 143
           N  P +  +  +       N  +    L  +M  +G+Q ++V  +++++      ++C N
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            K++E     + +I  G + N   Y TL+DG C  G    A ++  +++ +  + NV  Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I   CK+K +  A  LYS+ML K I P V+TYNTL  G   + +++ A  LF++M  
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
             +  D + +   +DGLCK G + +A  +   +     + D+ +Y+ L+DG     +   
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A  +F+++ R  +  DV +Y++MI+ LC    +D+A +L  +M +K +AP+ V +++L+ 
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 384 GCIRNNETSKVVELLHRMDER 404
           G  ++       +L++ M  R
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNR 323



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 6/284 (2%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV---NRA 184
           P +  F  I   L K         L   M   G++ +    N L++ FC  G+V   ++ 
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 185 KELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           KE     + +   G + N  SY  LI+G CK  E   A+ +   +    ++P VV Y+T+
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  AF L+ +M    ++ D   Y T + G    G + EA+ LF  + +   
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +++ L+DGLCK G +K A  +   + +  +  DV+TYN ++       + +KA  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +F  M  +GV PD  +++ ++ G  +     + V LL  M  ++
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS 289


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/433 (33%), Positives = 233/433 (53%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVAL----------NLFEEMI 46
           EA   F  +   G +P V TY  LI+G    G     H+ + L          ++F    
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFF 381

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G++ K              P+ V Y  +ID LCK G VD A+    QM ++ + 
Sbjct: 382 SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++V +NS++ G C  +    A+ L  EM+DQG+ PN V F+ ++  LC  G++ E  +L
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++LM  +GVRP+AF Y  L+ G+CLTGR + A+++F  M S+G      +Y+ L++GYC 
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCS 561

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  L+ EML KG+ P VVTYNT+  GLF+  +   A +L+  M   G   D + 
Sbjct: 562 ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYT 621

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GLCK+  + EA ++F++L     +L+I +++ +I  L K GR + A +LF ++P
Sbjct: 622 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ +VVTY ++   L  +G +++   LF  ME  G AP+    N L+   +   + S
Sbjct: 682 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDIS 741

Query: 393 KVVELLHRMDERN 405
           +    L ++DERN
Sbjct: 742 RAGAYLSKLDERN 754



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 204/422 (48%), Gaps = 41/422 (9%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV++YS +ING    G      NLF EMI+          PD V YTT+IDGLCK  
Sbjct: 195 CPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRG------IPPDVVTYTTVIDGLCKAQ 248

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
             D+A+ +  QM D    P+  TYN +I G+       E  ++  EM  +G++P+  T+ 
Sbjct: 249 LFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYG 308

Query: 135 VIMDELCKNGKMEEAS-----------------------------------QLLELMIQI 159
            +++ LCKNG+  EA                                      L+LM++ 
Sbjct: 309 SLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN 368

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ P+  ++N     +   G +++A ++F  M   G   NV +Y  LI+  CK   ++ A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
              +++M+++G+ P +V +N+L  GL  + + ERA +L  EM   G+  +   + T I  
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LC  G ++E   L   +  +    D  SY+ LI G C +GR   A ++F  +    L   
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            VTYN ++H  C+  ++D A+ LF +M  KGV P  V +NT++ G  +    S+  EL  
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 608

Query: 400 RM 401
            M
Sbjct: 609 NM 610



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 198/399 (49%), Gaps = 33/399 (8%)

Query: 17  PNVITYSTLINGLCRTGH------------------TIVALN-LFEEMINGN--GEFGVV 55
           PN+ TYS LI   CR GH                    +A+N L + + +G   GE   V
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 56  ---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD---KNINPDVVTYNSVIR 103
                    C PD V YT ++ GLC E   ++A ELL  M D   +   P+VV+Y+ VI 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF      ++   LF+EM+D+G+ P+VVT++ ++D LCK    + A  + + MI  G +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N + YN L+ G+   G+     ++   M + G K + ++Y  L+N  CKN     A   +
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+ KGIKP V TY  L  G      +       D M  +G++ D   +  F     K 
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G I +A+++F  +R      ++ +Y  LID LCK GR+  A   F+ +    +  ++V +
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           N +++ LC   K ++A +L  +M  +G+ P+ V FNTL+
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 20/378 (5%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAV-----IYTTIIDGLCK---EGFVDKAKELLLQMKDK 89
           AL LF+E+++         +P +V     + T +    C    E  V     ++ +  DK
Sbjct: 33  ALKLFDELLHH-------ARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK 85

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            + P++ TY+ +I  FC           F  ++  G + + +  + ++  LC   ++ EA
Sbjct: 86  -VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 150 SQ-LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSI 205
              LL+ M ++G  P+   Y  L+ G C   R   A EL   M       C  NV SYSI
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +ING+    +++   +L+ EM+ +GI P VVTY T+  GL +    +RA  +F +M  +G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              + + Y   I G    G   E +++   +     + D  +Y  L++ LCK+GR + A 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
             F S+ R  +   V TY I+IH     G + + H     M   G++PD   FN      
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 386 IRNNETSKVVELLHRMDE 403
            +     K +++ ++M +
Sbjct: 385 AKCGMIDKAMDIFNKMRQ 402



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME   L   ++  G  P+  +Y+ LI+G C TG T  A  +F+ M++      +   P  
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS------IGLSPTE 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G C    +D A  L  +M  K + P VVTYN+++ G       +EAK L++ 
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ T+++I++ LCK+  ++EA ++ + +   G++ N   +  ++      GR
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   NV +Y ++     +   +E   SL+S M   G  P     N 
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 730 LVRRLLHRGDISRA 743



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 6/221 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P V+TY+T+++GL +T     A  L+  MIN     G  C  D  
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS----GTKC--DIY 620

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I++GLCK   VD+A ++   +  K +  +++T+  +I          +A  LF  +
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVVT+ ++ + L + G +EE   L   M + G  PN+ + N L+      G +
Sbjct: 681 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 740

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           +RA      ++         + S+L++ +  ++    A SL
Sbjct: 741 SRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGL----CKNGYIVEALELFRTLRIL--KCELD 304
           ++ A KLFDE+  H   A   A+   +  +    C +   +      R +R    K   +
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS LI   C+ G L+  +  F  + +     D +  N ++  LC   ++ +A D+ L
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 365 D-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             M   G  PD V++  L+ G        + +ELLH M
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMM 187


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/383 (38%), Positives = 221/383 (57%), Gaps = 7/383 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA +L  +    G   + + Y T+INGLC+ G T  A+ +F +M        +   P+ 
Sbjct: 157 LEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK------IRVYPNL 210

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y T+IDGLCK+G VD+A  L  +M +  I  DV +YNS+I GFC       A +L  E
Sbjct: 211 IMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDE 270

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+ +G V P+V TF++++D LCK G++ EA  ++ +MI+ G +P+   YN LM+G+CL+G
Sbjct: 271 MVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSG 330

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V  AK++F  M       NV SY  LINGYCK + ++ A+ L +EM +K + P  VTYN
Sbjct: 331 SVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYN 390

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL +  +    + L + M+  G  AD   Y   +D   K+    +AL LF+ +  +
Sbjct: 391 CLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI 450

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +IR+Y+ L+DGLCKSGRLK A E+F  L       ++ TYNIMIH LC +G +D+A
Sbjct: 451 GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEA 510

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
             L   M      P+ + F+T++
Sbjct: 511 EALLYKMVNNNYLPNYITFDTIV 533



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 36/384 (9%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KP  + ++ +I+   + G +  A  LL  +       DV    ++++G C      EA  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E +D+G + + V +  I++ LCK GK  +A Q+   M +I V PN  +YNT++DG C
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTV 235
             G V+ A  L   M   G + +V+SY+ +I+G+C     + A+ L  EM+ +G + P V
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T+N L  GL ++ +V  A+ +   M + G   D  +Y   ++G C +G + EA ++F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 296 L--------RILKCEL---------------------------DIRSYSCLIDGLCKSGR 320
           +         I  C L                           D  +Y+CL+DGL KSGR
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
               W+L  ++      AD++TYN+++       K DKA  LF  +   G++P+   +N 
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G  ++       E+   +  +
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAK 485



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 161/320 (50%), Gaps = 2/320 (0%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
           +LQ K   I P ++T++ +I  F        A  L   ++  G Q +V   + +M  LC 
Sbjct: 94  ILQSK-PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCL 152

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            G++ EA  LL   +  G R +   Y T+++G C  G+   A ++F  M+ +    N+  
Sbjct: 153 KGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIM 212

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +I+G CK   ++ A  L +EM+  GI+  V +YN++  G   + + + A KL DEM 
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMV 272

Query: 263 RHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
             G V  D + +   IDGLCK G + EA  +   +     + DI SY+ L++G C SG +
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSV 332

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A ++F  +     + +V++Y  +I+  C    +D+A  L  +M  K + PD V +N L
Sbjct: 333 GEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL 392

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  ++  +    +L+  M
Sbjct: 393 LDGLSKSGRSLYEWDLVEAM 412



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 147/281 (52%), Gaps = 1/281 (0%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+++TFS++++   + G+M  A  LL  ++++G + +  +  TLM G CL GRV  A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L       G + +   Y  +ING CK  +   A+ ++ +M    + P ++ YNT+  GL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-KCELD 304
            +   V+ A  L  EM  +G+  D ++Y + I G C  G    A++L   + +  K   D
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++ LIDGLCK GR+  A+ +   + +     D+V+YN +++  C  G + +A  +F 
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M  +   P+ +++ TL+ G  +     + + LL  M  +N
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKN 381


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 138/353 (39%), Positives = 207/353 (58%), Gaps = 6/353 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G + N ++Y TLINGLC+ G T  AL +   +       G + + D V
Sbjct: 157 KALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRID------GKLVRLDVV 210

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIIDG+CK+  V+ A +   +M  K I P VVTYN++I G C      +A  L  +M
Sbjct: 211 MYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKM 270

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P V TFS+++D  CK GK++EA  +  +M++  V+PN   YN+LM+G+CL   V
Sbjct: 271 ILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEV 330

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A+ +F +M  +G   +V SYSI+I+G+CK K ++ A+ L+ EM  K I P VVTYN+L
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A KL  EM   G   +   Y + +D LCKN ++ +A+EL   L+    
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           +  + +Y+ LI+GLCKSGRLK A ++F  +       DV TYN MI   C  G
Sbjct: 451 QPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 208/380 (54%), Gaps = 6/380 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++F+ +   G EP+ IT +TLI GLC  G    AL+  ++++       +  + + V Y 
Sbjct: 125 SVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVL------ALGFQLNQVSYR 178

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLCK G    A E+L ++  K +  DVV YN++I G C     N+A   + EM+ +
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P VVT++ ++  LC  G++++A  LL  MI   + P  + ++ L+D FC  G+V  A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +FV M     K N+ +Y+ L+NGYC   E+  A S+++ M   G+ P V +Y+ +  G
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +I  V+ A KLF+EM    +  D   Y + IDGLCK+G I  AL+L   +       +
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +Y+ L+D LCK+  +  A EL   L    +   V TYNI+I+ LC  G++  A  +F 
Sbjct: 419 IITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
           D+   G   D   +NT++ G
Sbjct: 479 DVLVNGYNIDVYTYNTMIKG 498



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 202/382 (52%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
             +L  +++  G   N++T S LIN   + GH  ++ ++F  ++    E      PDA+ 
Sbjct: 88  VVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYE------PDAIT 141

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            TT+I GLC +G + KA     ++       + V+Y ++I G C    +  A  +   + 
Sbjct: 142 LTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRID 201

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V+ +VV ++ I+D +CK+  + +A      M+   + P    YNTL+ G C+ G++ 
Sbjct: 202 GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLK 261

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M        V+++SIL++ +CK  +++ A +++  M+ K +KP +VTYN+L 
Sbjct: 262 DAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLM 321

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   +++V +A  +F+ M + GVA D  +Y   I G CK   + EA++LF  +   +  
Sbjct: 322 NGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIF 381

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LIDGLCKSGR+  A +L   +       +++TYN ++ ALC +  +DKA +L
Sbjct: 382 PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
              ++   + P    +N L+ G
Sbjct: 442 LTKLKDHNIQPSVCTYNILING 463



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 166/286 (58%), Gaps = 6/286 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   ++++ A    P V+TY+TLI GLC  G    A+ L  +MI  N        P   
Sbjct: 227 DAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN------INPTVY 280

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ ++D  CKEG V +AK + + M  K++ P++VTYNS++ G+C  N+ N+A+ +F  M
Sbjct: 281 TFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++S+++   CK   ++EA +L E M    + P+   YN+L+DG C +GR+
Sbjct: 341 AQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRI 400

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   N+ +Y+ L++  CKN  ++ A+ L +++    I+P+V TYN L
Sbjct: 401 SYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNIL 460

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             GL +  +++ A K+F+++  +G   D + Y T I G CK G+++
Sbjct: 461 INGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 178/347 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+  L K         L  QM+   I  ++VT + +I  F     ++ +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G +P+ +T + ++  LC  G + +A    + ++ +G + N   Y TL++G C 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+   A E+   ++    + +V  Y+ +I+G CK+K +  A   YSEM++K I PTVVT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  GL  + Q++ A  L  +M    +    + +   +D  CK G + EA  +F  + 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I +Y+ L++G C    +  A  +F+++ +  +  DV +Y+IMI   C    +D
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  LF +M  K + PD V +N+L+ G  ++   S  ++L+  M +R
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR 413



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 35/290 (12%)

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            S    L+ Q    P+   +  ++         +    L   ME  G   N+ + SILIN
Sbjct: 53  VSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILIN 112

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            + +      + S++S +L KG +P  +T  TL  GL     + +A    D++   G   
Sbjct: 113 CFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQL 172

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS---------- 318
           +  +YRT I+GLCK G    ALE+ R +      LD+  Y+ +IDG+CK           
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 319 -------------------------GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
                                    G+LK A  L H +    +   V T++I++ A C +
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           GK+ +A ++F+ M  K V P+ V +N+LM G    NE +K   + + M +
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/401 (36%), Positives = 228/401 (56%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  + + G  P+   ++ LI    + G    A  +F EM     E GV  +PD V Y+T
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM----REQGV--EPDVVTYST 431

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + P + TY+ +I+GFC   D  +AK L ++MM++G
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P++  F+ I++ LCK G++ +A  + +  I IG+ PN  VYNTLMDG+CL G++  A 
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F  M S G + NV  Y  L+NGYCK   I+  LSL+ E+L KGIKP+   YN +  GL
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+  +   A   F EM   G+A D + Y   + GL KN    EA+ LF+ L  +  ++DI
Sbjct: 612 FQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDI 671

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +I G+ +  R++ A +LF S+ R  L+  VVTY+IM+  L  +G +++A D+F  
Sbjct: 672 TTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS 731

Query: 366 MEAKGV-APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ME  G   P+    N ++   +   E  +    L ++DER+
Sbjct: 732 MENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERS 772



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 4/379 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC P+V +Y  ++  LC    +  A  L   M  G    G VC P+AV Y T
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG----GAVCLPNAVAYNT 221

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG  KEG V+KA +L  +M  + I+PD+ TYN V+   C A   ++A+ +  +M+D+G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P+  T++ ++      G+ +EA ++ + M   G+ P+    N+LM   C  G++  A+
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F SM   G K ++FSY I++NGY     +     L++ MLS GI P    +N L    
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++RA  +F+EM+  GV  D   Y T I  LC+ G + +A+E F  +        I
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSI 461

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  LI G C  G L  A +L   +    +  D+  +N +I+ LC  G++  A ++F  
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521

Query: 366 MEAKGVAPDCVAFNTLMLG 384
             + G+ P+ + +NTLM G
Sbjct: 522 TISIGLHPNVMVYNTLMDG 540



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 211/461 (45%), Gaps = 76/461 (16%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN + Y+T+I+G  + G    A +LF EM+    + G+   PD   Y  +++ LCK  
Sbjct: 212 CLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV----QRGI--SPDLSTYNCVVNALCKAR 265

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+ +L QM DK + PD  TYNS+I G+       EA R+  +M  QG+ P+VVT +
Sbjct: 266 AMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLN 325

Query: 135 VIMDELCKNGKMEEA-----------------------------------SQLLELMIQI 159
            +M  LCK+GK+++A                                   ++L  LM+  
Sbjct: 326 SLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD 385

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ P++ ++N L+  +   G ++RA  +F  M   G + +V +YS +I   C+  +++ A
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIG----------------------------------- 244
           +  +++M+ +G+ P++ TY+ L  G                                   
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++ +V  A  +FD     G+  +   Y T +DG C  G +  AL +F  +     + +
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y  L++G CK GR+     LF  +    +      YNI++H L   G+   A   F 
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFH 625

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +M   G+A D   ++ ++ G  +N+ + + + L   +   N
Sbjct: 626 EMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 186/375 (49%), Gaps = 6/375 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR G  + A+ LF  +   +G    V  P    Y  ++D   +            Q+   
Sbjct: 81  CRDGPAL-AVALFNRVSRAHGP--RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKT 137

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            +  D +  ++++RG C A  + EA  + +  M   G  P+V ++ +++  LC + K  +
Sbjct: 138 GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQ 197

Query: 149 ASQLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           A +LL +M + G    PNA  YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 198 ADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCV 257

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +N  CK + ++ A ++  +M+ KG+ P   TYN+L  G     Q + A ++  +M   G+
Sbjct: 258 VNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D     + +  LCK+G I +A ++F ++ +   + DI SY  +++G    G L    E
Sbjct: 318 LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTE 377

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF+ +    +  D   +N++I A    G +D+A  +F +M  +GV PD V ++T++    
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALC 437

Query: 387 RNNETSKVVELLHRM 401
           R  +    VE  ++M
Sbjct: 438 RIGKMDDAVEKFNQM 452


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 235/421 (55%), Gaps = 28/421 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C+PNV+T++TL+NGLCR G  + A+ L + M+    E G+  +P+ +
Sbjct: 166 EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML----EDGL--QPNQI 215

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTY-----NSVIRGFCYANDSNEAK 115
            Y TI+DG+CK G    A  LL +M++  +I P+VV +       +I GFC +   +EA+
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275

Query: 116 RLFIEMMD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           +L  EM++ + + P+VVT++ +++   K GK  EA +L + M+  G+ P+   Y++++DG
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           FC   R++ A+ +F  M + GC  ++ +++ LI GYC+ K ++  + L  EM   G+   
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            +TY TL  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +ALE+F+
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 455

Query: 295 TLRILK-----------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
            ++  K            E D+++Y+ LI GL   G+   A EL+  +P   ++ D +TY
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 515

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +IH LC   ++D+A  +F  M +K  +P+ V F TL+ G  +       +EL   M  
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 575

Query: 404 R 404
           R
Sbjct: 576 R 576



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 224/418 (53%), Gaps = 22/418 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E     KP+ 
Sbjct: 196 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSHIKPNV 250

Query: 61  VIY-----TTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VI+     T +I+G C  G   +A++LL +M + K I+PDVVTYN++I  F       EA
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEA 310

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + L+ EM+ +G+ P+ +T+S ++D  CK  +++ A  +  LM   G  P+   +NTL+ G
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C   RV+   +L   M   G   N  +Y+ LI+G+C+  ++  A  L  EM+S G+ P 
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQR-----------HGVAADTWAYRTFIDGLCKN 283
           VVT NTL  GL +  +++ A ++F  MQ+           +GV  D   Y   I GL   
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G  +EA EL+  +       D  +Y+ +I GLCK  RL  A ++F S+       +VVT+
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +I+  C  G++D   +LF +M  +G+  + + + TL+ G  +    +  +++   M
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608



 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 227/421 (53%), Gaps = 28/421 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F K+   G  P V+T+STL++GLC       AL+LF +M          CKP+ V 
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----------CKPNVVT 181

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+++GLC+EG V +A  LL +M +  + P+ +TY +++ G C   D+  A  L  +M 
Sbjct: 182 FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 241

Query: 123 D-QGVQPNVVTFSV-----IMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGF 175
           +   ++PNVV + +     +++  C +G+  EA QLL+ M++   + P+   YN L++ F
Sbjct: 242 EVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAF 301

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
              G+   A+EL+  M   G   +  +YS +I+G+CK   ++ A  ++  M +KG  P +
Sbjct: 302 VKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDI 361

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           +T+NTL  G     +V+   KL  EM   G+ A+T  Y T I G C+ G +  A +L + 
Sbjct: 362 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 421

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----------PRGVLIADVVTYN 344
           +       ++ + + L+DGLC +G+LK A E+F ++           P   +  DV TYN
Sbjct: 422 MVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYN 481

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I+I  L  +GK  +A +L+ +M  +G+ PD + +N+++ G  + +   +  ++   M  +
Sbjct: 482 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541

Query: 405 N 405
           +
Sbjct: 542 S 542



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 17/345 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  P+ ITYS++I+G C+      A ++F  M          C PD +
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPDII 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G C+   VD   +LL +M +  +  + +TY ++I GFC   D N A+ L  EM
Sbjct: 363 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-----------GVRPNAFVYNT 170
           +  GV PNVVT + ++D LC NGK+++A ++ + M +            GV P+   YN 
Sbjct: 423 VSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNI 482

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G    G+   A+EL+  M   G   +  +Y+ +I+G CK   ++ A  ++  M SK 
Sbjct: 483 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P VVT+ TL  G  +  +V+   +LF EM R G+ A+   Y T I G  K G I  AL
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGAL 602

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           ++F+ +       D  +   ++ GL     LK A  +   L   V
Sbjct: 603 DIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 184/404 (45%), Gaps = 44/404 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A++LF +M+           P  + +  ++  + + G +D    L  +M+ + +  +  +
Sbjct: 62  AIDLFGDMVRSRP------LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS----------------------- 134
           +  +++ FC  +    A   F ++   G  P VVTFS                       
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 135 --------VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
                    +M+ LC+ G++ EA  LL+ M++ G++PN   Y T++DG C  G    A  
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 187 LFVSMESMG-CKHNVFSYSI-----LINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYN 239
           L   ME +   K NV  + +     +ING+C +     A  L  EML  K I P VVTYN
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +  +   A +L+DEM   G+   T  Y + IDG CK   +  A  +F  +   
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  DI +++ LI G C++ R+    +L H +    L+A+ +TY  +IH  C  G ++ A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            DL  +M + GV P+ V  NTL+ G   N +    +E+   M +
Sbjct: 416 QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 148/345 (42%), Gaps = 52/345 (15%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF       +A  LF +M+     P+V+ F  +M  + + G+++    L   M    V  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           NA+ +  LM  FC   ++  A   F  +  +G    V ++S L++G C    I  AL L+
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M     KP VVT+ TL  GL    +V  A  L D M   G+  +   Y T +DG+CK 
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 284 GYIVEALELFRTLR--------ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS----- 330
           G  V AL L R +         ++   L+ R  +C+I+G C SGR   A +L        
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERR--TCMINGFCSSGRWSEAQQLLQEMLERK 285

Query: 331 --------------------------------LPRGVLIADVVTYNIMIHALCADGKMDK 358
                                           LPRG+ I   +TY+ MI   C   ++D 
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI-IPSTITYSSMIDGFCKQNRLDA 344

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  +F  M  KG +PD + FNTL+ G  R       ++LLH M E
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 45/265 (16%)

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +E+A  L   M++    P+   +  LM      GR++    L   ME      N +S++I
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+  +C   ++  ALS + ++   G  PTVVT++TL                        
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTL------------------------ 154

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                      + GLC    I EAL+LF  +    C+ ++ +++ L++GLC+ GR+  A 
Sbjct: 155 -----------LHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAV 199

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLG 384
            L   +    L  + +TY  ++  +C  G    A +L   M E   + P+ V +      
Sbjct: 200 ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRT 259

Query: 385 CIRN-----NETSKVVELLHRMDER 404
           C+ N        S+  +LL  M ER
Sbjct: 260 CMINGFCSSGRWSEAQQLLQEMLER 284



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 4/198 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G+ + K +E A+ L+ +M+     P+V+ +  L   +  + +++    L  +M+   
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V  + +++   +   C    +  AL  F  +  L     + ++S L+ GLC   R+  A 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LFH + +     +VVT+  +++ LC +G++ +A  L   M   G+ P+ + + T++ G 
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T   + LL +M+E
Sbjct: 225 CKMGDTVSALNLLRKMEE 242


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/406 (34%), Positives = 234/406 (57%), Gaps = 13/406 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A++   K+   G EP+++T+++LING C       A+++  +M+    E G+  KPD V+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVM 179

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTTIID LCK G V+ A  L  QM++  I PDVV Y S++ G C +    +A  L   M 
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + ++P+V+TF+ ++D   K GK  +A +L   MI++ + PN F Y +L++GFC+ G V+
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++F  ME+ GC  +V +Y+ LING+CK K+++ A+ ++ EM  KG+    +TY TL 
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ +   A ++F  M   GV  +   Y   +  LC NG + +AL +F  ++  K E
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ--KRE 417

Query: 303 LD-----IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +D     I +Y+ L+ GLC +G+L+ A  +F  + +  +   ++TY I+I  +C  GK+ 
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +LF  + +KGV P+ V + T++ G  R     +   L  +M E
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+LF  M+           P  + +T +++ + K    D    L   ++   ++ D+ T
Sbjct: 56  ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N ++  FC ++    A     +MM  G +P++VTF+ +++  C   +MEEA  ++  M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G++P+  +Y T++D  C  G VN A  LF  ME+ G + +V  Y+ L+NG C +    
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL   M  + IKP V+T+N L     +  +   A +L++EM R  +A + + Y + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +G C  G + EA ++F  +    C  D+ +Y+ LI+G CK  ++  A ++F+ + +  L 
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + +TY  +I      GK + A ++F  M ++GV P+   +N L+     N +  K + +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409

Query: 398 LHRMDER 404
              M +R
Sbjct: 410 FEDMQKR 416



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 165/307 (53%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++R   ++   NEA  LF  M++    P+++ F+ +++ + K  K +    L + + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +GV  + +  N LM+ FC + +   A      M  +G + ++ +++ LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+S+ ++M+  GIKP VV Y T+   L +   V  A  LFD+M+ +G+  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC +G   +A  L R +   K + D+ +++ LID   K G+   A EL++ + R  + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++ TY  +I+  C +G +D+A  +F  ME KG  PD VA+ +L+ G  +  +    +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 398 LHRMDER 404
            + M ++
Sbjct: 340 FYEMSQK 346



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 150/270 (55%), Gaps = 9/270 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L+ ++      PN+ TY++LING C  G    A  +F  M          C PD 
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDV 317

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT++I+G CK   VD A ++  +M  K +  + +TY ++I+GF      N A+ +F  
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M+ +GV PN+ T++V++  LC NGK+++A  + E M +    GV PN + YN L+ G C 
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++ +A  +F  M        + +Y+I+I G CK  +++ A++L+  + SKG+KP VVT
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           Y T+  GLF       A  LF +M+  GV+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)

Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           S  +  +C  +EI            AL L++ M+     P+++ +  L   + ++ + + 
Sbjct: 31  SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              L D +Q  GV+ D +     ++  C++     A      +  L  E DI +++ LI+
Sbjct: 91  VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C   R++ A  + + +    +  DVV Y  +I +LC +G ++ A  LF  ME  G+ P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V + +L+ G   +        LL  M +R
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/404 (35%), Positives = 215/404 (53%), Gaps = 16/404 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMI----NGNGEFGV-----------VCKP 58
           G  PN  TY+ L+ GLC+ G +      FE+M+      +  + +           VC+P
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             V Y T++ GL K G V  A  LL  M +  ++PDV+T+NSV+ G C      +A  +F
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
              +++G +PNVVT+S ++D L K  KM+EA QLL  M+++G R N   Y+T++DG    
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR+  A  +   M   GC  +  +Y+ LI+G+ K + +  A+ L  EML  G  P+VVTY
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-R 297
            TL  GL    + + A ++ D M   G A +   Y + +DGLCK G + EAL  F  + R
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  + +YS LIDGLCK+GR+  A+E    + R   I DVVT++I+I+ LC  G++D
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +LF  M  +G   D  A+N ++       E S    LL  M
Sbjct: 772 TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 211/407 (51%), Gaps = 11/407 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +F +    GC PNV+TYSTLI+GL +      AL L  +M+    E G  C+ + 
Sbjct: 525 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELG--CRANT 578

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++DGL K G ++ A  +L QM+D    PD VTYN++I GF       EA  L  E
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+VVT++ +   LC++G+ +EA ++L+ M   G  PNA  Y++++DG C  GR
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 181 VNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           V  A   F  M  + +   H V +YS LI+G CK   I+ A      M+  G  P VVT+
Sbjct: 699 VTEALGYFEKMARDEVVAPH-VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           + L  GL +  +++   +LF  M   G  AD +AY   I+  C  G    A  L   ++ 
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT 817

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                +  ++  +I  LC + R+  A   FHS+P      D ++YN +I +L A  + ++
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQ 875

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A +L   M A G +PD   + T+M G  +        +LL  M  R 
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922



 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 218/438 (49%), Gaps = 43/438 (9%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  +  +++  GC P+ +TY+TLI+G  +      A+ L  EM+    E G    P  V
Sbjct: 596  DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVV 649

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YTT+  GLC+ G  D+A E+L  M  +   P+ +TY+S++ G C A    EA   F +M
Sbjct: 650  TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 122  M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              D+ V P+V+ +S ++D LCK G+++EA + LE MI+ G  P+   ++ L++G C  GR
Sbjct: 710  ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT--- 237
            ++   ELF  M   GCK ++++Y+ +IN YC   E   A +L  EM + GI    VT   
Sbjct: 770  IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGI 829

Query: 238  ------------------------------YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                          YNTL   L    + E+A +L   M   G +
Sbjct: 830  VIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 268  ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             D   Y T +DGL K G    A +L + +R      D+R+Y+ +I GL K+ +L +A + 
Sbjct: 890  PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 328  FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            F  + R  L  D + Y+ +I A C   K DK  D +  + + G+ P    ++T++    +
Sbjct: 950  FEEMLRKNLKPDAIVYSSLIDAFC---KADKVDDAWKLLRSSGIEPTITMYSTMVDSLCK 1006

Query: 388  NNETSKVVELLHRMDERN 405
            N  T K +E++  M  +N
Sbjct: 1007 NRGTDKALEVIREMKSKN 1024



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 205/392 (52%), Gaps = 15/392 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+VIT++++++GLC+    + A N+F+  +         C+P+ V Y+T+IDGL K 
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG------CRPNVVTYSTLIDGLSKM 556

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D+A +LL +M +     + VTY++V+ G        +A  +  +M D G  P+ VT+
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D   K  ++ EA  LL  M++ G  P+   Y TL  G C +GR + A E+   M +
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVE 252
            GC  N  +YS +++G CK   +  AL  + +M   + + P V+ Y+ L  GL +  +++
Sbjct: 677 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRID 736

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A++  + M R G   D   +   I+GLC  G I   LELF  +    C+ DI +Y+ +I
Sbjct: 737 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMI 796

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +  C  G    A+ L   +    +  + VT+ I+I ALC + ++D+A   F       + 
Sbjct: 797 NAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF-----HSIP 851

Query: 373 PDC---VAFNTLMLGCIRNNETSKVVELLHRM 401
            DC   +++NTL+   + +  + + +ELL  M
Sbjct: 852 EDCRDEISYNTLITSLVASRRSEQALELLRAM 883



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 212/401 (52%), Gaps = 13/401 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F K   FG  P V+TYST+I+GLCR         L EEM  G G     C P+AV
Sbjct: 19  DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA-GRG-----CAPNAV 72

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++ L  +G   +A  LL +M      P+++T+  +I+G C   +   A R+  EM
Sbjct: 73  TYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 132

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+V   +V++  LC+ G+++EA    + ++ IG  P+A  YNT++DG    GR+
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   +        VF+++I ++G  K   + GA   +  M   G+ P  VTY+ L
Sbjct: 193 EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDAL 252

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A  L  +       A  +A+ + + GLC+   + EA++L   L+ + C
Sbjct: 253 IDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAHRLEEAIQL---LKAMPC 306

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH- 360
             ++  ++ L++GLC++ R+  A+ELF  +      ADV+TYNI++  LC   ++ +A+ 
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + L    +G +P+ V F+TL+ G       ++  E+  RM
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 209/450 (46%), Gaps = 48/450 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG--------- 53
           A   F  +   G  PN +TY  LI+GLC+ G   +AL L  +  +  G F          
Sbjct: 230 AYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLC 289

Query: 54  --------------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
                         + C P+ V + ++++GLC+   VD+A EL   MK+   + DV+TYN
Sbjct: 290 QAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349

Query: 100 SVIRGFCYANDSNEAKRLFIEMM--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            +++G C      EA R  +E+M   +G  PNVVTFS ++  LC  G++ +A ++ E M+
Sbjct: 350 ILLKGLCKLRRIPEAYR-HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408

Query: 158 QI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--------------------- 195
            + G+ PN F Y  L++G C  G   R ++ F  M                         
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+  + +Y+ L+ G  K+  +  AL L   M+  G+ P V+T+N++  GL +  ++  A 
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +F      G   +   Y T IDGL K   + EAL+L   +  L C  +  +YS ++DGL
Sbjct: 529 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            K GR++ A  +   +     + D VTYN +I       ++ +A  L  +M   G  P  
Sbjct: 589 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 648

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           V + TL  G  R+    + VE+L  M  R 
Sbjct: 649 VTYTTLCHGLCRSGRFDEAVEILDYMAARG 678



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 209/390 (53%), Gaps = 21/390 (5%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
           ++TY+ LINGLC+ G    A   F + I    +FG   +P  V Y+T+IDGLC++  VDK
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAI----QFGF--RPTVVTYSTVIDGLCRDNEVDK 54

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
             +LL +M  +   P+ VTYN+++        + EA  L   M   G  P ++TF +I+ 
Sbjct: 55  GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIK 114

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCK G++E A ++++ M+  G  P+  ++  L+   C  GRV+ A   F  +  +G   
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174

Query: 199 NVFSYSILINGYCKNKEIEGA---LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           +  +Y+ +++G  K   +E A   L L +E  S    PTV T+     GL +   +  A+
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFS---SPTVFTFTIAVDGLSKAGNLTGAY 231

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           + FD M + GV+ +T  Y   IDGLCK G +  AL L   LR    +  + ++S L+ GL
Sbjct: 232 EFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGL 288

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C++ RL+ A +L  ++P    + +VV +N +++ LC   ++D+A +LF  M+  G + D 
Sbjct: 289 CQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345

Query: 376 VAFNTLMLGCI---RNNETSKVVELLHRMD 402
           + +N L+ G     R  E  + VEL+ R +
Sbjct: 346 ITYNILLKGLCKLRRIPEAYRHVELMRRTE 375



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 214/428 (50%), Gaps = 41/428 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  ++ A GC P +IT+  +I GLC+ G    A  + +EM++     G V  PD  
Sbjct: 89  EAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDR----GFV--PDVE 142

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+T ++  LC+ G VD+A     Q+      PD VTYN+++ G  Y     EA  + +++
Sbjct: 143 IHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL-YKAGRLEAAGMVLQL 201

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +    P V TF++ +D L K G +  A +  + M Q GV PN   Y+ L+DG C  G+
Sbjct: 202 LAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGK 261

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L     S   +  +F++S L++G C+   +E A+ L   M      P VV +N+
Sbjct: 262 LDIALGLLRDKNS---QAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNS 315

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA---LELFRTLR 297
           L  GL +  +V+ AF+LFD M+  G +AD   Y   + GLCK   I EA   +EL R  R
Sbjct: 316 LMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMR--R 373

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADG-- 354
              C  ++ ++S LI GLC +GR+  AWE++  +     I+ +  TY  ++  LC  G  
Sbjct: 374 TEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDS 433

Query: 355 -KMDKAHDLFLDMEAKGVA------------------PDCVAFNTLMLGCIRNNETSKVV 395
            ++++  +  L+ E +  +                  P  V +NTL+ G  ++      +
Sbjct: 434 RRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDAL 493

Query: 396 ELLHRMDE 403
            LL  M E
Sbjct: 494 GLLEFMIE 501



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 175/398 (43%), Gaps = 76/398 (19%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  +   + A GC PN ITYS++++GLC+ G    AL  FE+M         V  P  +
Sbjct: 666  EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE-----VVAPHVI 720

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT------------------------ 97
             Y+ +IDGLCK G +D+A E L +M      PDVVT                        
Sbjct: 721  AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 98   -----------YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                       YN++I  +C   + + A  L  EM   G+  N VT  +++  LC N ++
Sbjct: 781  AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 147  EEAS---------------------------------QLLELMIQIGVRPNAFVYNTLMD 173
            +EA                                  +LL  M+  G  P+A  Y T+MD
Sbjct: 841  DEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMD 900

Query: 174  GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            G    G    A +L   M S G   ++ +Y+I+I+G  K K++  A   + EML K +KP
Sbjct: 901  GLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKP 960

Query: 234  TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
              + Y++L     +  +V+ A+KL   ++  G+      Y T +D LCKN    +ALE+ 
Sbjct: 961  DAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVI 1017

Query: 294  RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            R ++   CE  I  ++ L       GR+  A +L + L
Sbjct: 1018 REMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%)

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+GLCK G + +A   FR          + +YS +IDGLC+   +    +L   + 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 + VTYN +++AL   G+  +A  L   M A G  P+ + F  ++ G  +  E  
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 393 KVVELLHRMDERN 405
               ++  M +R 
Sbjct: 124 AAFRVVDEMVDRG 136



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +VTYN++I+ LC  G++  A   F      G  P  V ++T++ G  R+NE  K  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 400 RMDERN 405
            M  R 
Sbjct: 61  EMAGRG 66


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY TLINGL + G    AL+L +EM   +       +P+ V+Y+ +IDGLCK+GFV  A 
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L  Q+ ++ I  D VTYNS+I G C      E  +L  +M+ + V P+  TF++++D L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G++ EA  +L +M + G +P+   YN LM+G+C    V+ A+ELF  M   G + +V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y++LI+GYCK K ++ A+ L+ E+ +K + PT+ +YN+L  GL    ++    KL DE
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M       D   Y   ID LCK G I+EAL +   +     + +I +Y+ ++DG C    
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           + +A ++F+ + +  L  D++ YN++I+  C    +D+A  LF +M  K + PD  ++N+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G         V ELL  M
Sbjct: 516 LIDGLCNLGRIPHVQELLDEM 536



 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 218/404 (53%), Gaps = 7/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G +P+++TY+ L+ G C   +   A  LF  M+    E      PD 
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDV 335

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +IDG CK   VD+A  L  ++ +KN+ P + +YNS+I G C +   +  K+L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+VVT+++++D LCK G++ EA  +L +M++ GV+PN   YN +MDG+CL   
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN AK++F  M   G + ++ +Y++LINGYCK + ++ A+ L+ EM  K + P + +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL  + ++    +L DEM   G + D   Y   +D  CK     +A+ LFR + +  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +   ++D LCK  +LK+A +    L       +V TY I+I+ALC DG   +A 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L   ME     PD + F  ++   ++ NET K  +L   M  R
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 202/373 (54%), Gaps = 7/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +++   G   + +TY++LI+G C  G       L  +M+  N +      PD  
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD------PDDY 266

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ +L  M  +   PD+VTYN+++ G+C   + +EA+ LF  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+V+ ++V++D  CK   ++EA  L + +    + P    YN+L+DG C +GR+
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  K+L   M       +V +Y+ILI+  CK   I  AL +   M+ KG+KP +VTYN +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G    + V  A  +F+ M + G+  D   Y   I+G CK   + EA+ LF+ +R    
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+ LIDGLC  GR+    EL   +       DV+TYNI++ A C     DKA  
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 362 LFLDMEAKGVAPD 374
           LF  +  +G+ PD
Sbjct: 567 LFRQI-VEGIWPD 578



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 210/403 (52%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   G +PN++T++T+ING C  G    AL+  + ++     F      D   
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF------DQFT 162

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GL K G +  A  LL +M+  ++ P++V Y+++I G C     ++A  L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+  + VT++ ++D  C  G+ +E +QLL  M++  V P+ + +N L+D  C  GR+ 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ +   M   G K ++ +Y+ L+ GYC  + +  A  L++ M+ +G++P V+ YN L 
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   V+ A  LF E+    +     +Y + IDGLC +G I    +L   +      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LID LCK GR+  A  +   + +  +  ++VTYN M+   C    ++ A D+
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F  M   G+ PD + +N L+ G  +     + + L   M  +N
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 198/418 (47%), Gaps = 30/418 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN-----GEFGVVC 56
           +A   F ++      P    +  L+  + R GH   A++LF ++ +         F ++ 
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +P+ V + TII+G C  G + KA +    +  +   
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            D  TY ++I G         A  L  EM    VQPN+V +S ++D LCK+G + +A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              + + G+  +A  YN+L+DG C  GR     +L   M       + ++++ILI+  CK
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I  A  + + M  +G KP +VTYN L  G      V  A +LF+ M + G+  D   
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   IDG CK   + EA+ LF+ L        I SY+ LIDGLC SGR+    +L   + 
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
                 DVVTYNI+I ALC +G++ +A  + + M  KGV P+ V +N +M G C+RNN
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR  +   A+  F  M+       V   P   ++  ++  + + G    A  L  Q++ K
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            I+P + T+  +I  + + + +  A  L   ++  G QPN+VTF+ I++  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
               + ++  G   + F Y TL++G    G++  A  L   ME    + N+  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK+  +  AL L S++  +GI    VTYN+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            + +   ID LCK G I+EA  +   +     + DI +Y+ L++G C    +  A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L  DV+ YN++I   C    +D+A  LF ++  K + P   ++N+L+ G   + 
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 390 ETSKVVELLHRM 401
             S V +LL  M
Sbjct: 385 RISHVKKLLDEM 396



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 7/266 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G +PN++TY+ +++G C   +  VA ++F  M+    E      PD 
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDI 475

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+G CK   VD+A  L  +M+ KN+ PD+ +YNS+I G C        + L  E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G  P+V+T+++++D  CK    ++A  L   +++ G+ P+ +  + ++D  C   +
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++    +   GC  NV +Y+ILIN  CK+     A+ L S+M      P  +T+  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   L + ++ ++A KL +EM   G+
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 35/299 (11%)

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+   +++A      M+++   P   V++ L+      G    A  LF  ++S G   ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +++ILIN Y        A SL + +L  G +P +VT+NT+  G      + +A      
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           +   G   D + Y T I+GL KNG I  AL L + +     + ++  YS LIDGLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 321 LKIAWELFHSL-PRGVLI----------------------------------ADVVTYNI 345
           +  A  L   +  RG+L+                                   D  T+NI
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I ALC +G++ +A  +   M  +G  PD V +N LM G        +  EL +RM +R
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL++++ SKGI P++ T+  L    F       AF L   + + G   +   + T I+
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G C NG I +AL+  + L       D  +Y  LI+GL K+G++K A  L   + +  +  
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           ++V Y+ +I  LC DG +  A  L   +  +G+  D V +N+L+ GC       +V +LL
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 399 HRMDERN 405
            +M   N
Sbjct: 254 TKMVREN 260


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/407 (36%), Positives = 227/407 (55%), Gaps = 10/407 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  K++  G   N  TY  L+NGLC+ G T  AL   ++M+  N        P+ V
Sbjct: 163 HALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRN------LGPNVV 216

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA-NDSNEAKRLFIE 120
           +Y  I+DGLCK G V +A  LL +M   N+ P+VVTYN +I+G C       E   LF E
Sbjct: 217 VYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNE 276

Query: 121 MM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+ ++G+ P+V TFS+++D  CK G +  A  ++  M++IGV PN   YN+L+ G+CL  
Sbjct: 277 MVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRS 336

Query: 180 RVNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           ++  A  +F  M  E  GC  +V +++ LI+G+CK KE++ A+SL SEM+ KG+ P V T
Sbjct: 337 QMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFT 396

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           + +L  G  E+ +   A +LF  M+ HG   +       +DGL K     EA+ LFR + 
Sbjct: 397 WTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMM 456

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +LDI  Y+ ++DG+CK G+L  A +L   +    L  D  TYNIMI  LC +G +D
Sbjct: 457 KSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLD 516

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A +L   M+  G  P+  ++N  + G +R  + ++  + L  M ++
Sbjct: 517 DAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDK 563



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 188/355 (52%), Gaps = 8/355 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC-RTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  L  ++     EPNV+TY+ LI GLC   G     + LF EM+    E G+V  PD 
Sbjct: 233 EALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMV---AEKGIV--PDV 287

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             ++ ++DG CKEG + +A+ ++  M    + P+VVTYNS+I G+C  +   EA R+F  
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347

Query: 121 MM--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           M+   +G  P+VVT + ++   CK  ++++A  LL  M+  G+ P+ F + +L+ GFC  
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEV 407

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            +   A+ELF +M+  G   N+ + +++++G  K      A++L+  M+  G+   +V Y
Sbjct: 408 KKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIY 467

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +  G+ ++ ++  A KL   +   G+  D++ Y   I GLC+ G + +A EL R ++ 
Sbjct: 468 NIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKE 527

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             C  +  SY+  + GL +   +  + +    +       D  T  ++I  L A+
Sbjct: 528 NGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSAN 582



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 4/277 (1%)

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V T ++ ++ LC   K      +L LM +IG+ P     NT+++G C+ G VN A  L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             ME++G   N  +Y  L+NG CK  +  GAL    +M+ + + P VV YN +  GL + 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEALELFRTLRILKCEL-DIR 306
             V  A  L  EM    V  +   Y   I GLC   G   E + LF  +   K  + D++
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           ++S L+DG CK G L  A  +   + R  +  +VVTYN +I   C   +M++A  +F  M
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLM 348

Query: 367 --EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             E +G  P  V  N+L+ G  +  E  K + LL  M
Sbjct: 349 VREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEM 385



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LF  +K  G  PN+ T + +++GL +      A+ LF  M+    +       D 
Sbjct: 411 LAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDL------DI 464

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY  ++DG+CK G ++ A++LL  +  K +  D  TYN +I+G C     ++A+ L  +
Sbjct: 465 VIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRK 524

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           M + G  PN  +++V +  L +   +  + + L++M   G   +A
Sbjct: 525 MKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDA 569



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)

Query: 282 KNGYIVEALELFRTLRIL-KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           K+ +   A+ L + L  L     D+ + +  I+ LC   +  + + +   + +  L   +
Sbjct: 86  KSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTL 145

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VT N +++ LC +G ++ A  L   ME  G   +   +  L+ G  +  +TS  +E L +
Sbjct: 146 VTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKK 205

Query: 401 MDERN 405
           M +RN
Sbjct: 206 MVKRN 210


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 236/433 (54%), Gaps = 31/433 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVVC 56
           EA  +F  +   G  P+  TY TL++G    G     H ++AL + + +   +  F ++ 
Sbjct: 243 EARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILI 302

Query: 57  K------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +                        P+ V YTT+ID LCK G V+ A     QM  + ++
Sbjct: 303 RAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLS 362

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD++T+ S+I G C   +  + ++L  EM+++G+ PN +  + IMD LCK G++ EA   
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDF 422

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + +I +GV+P+   Y  L+DG+CL G+++ + +L   M S+G + +  +YS L+NGYCK
Sbjct: 423 FDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  ++ AL+LY EM SK +KP  +TYN +  GLF   +V  A + + ++   G+      
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-L 331
           Y   + GLC+N ++ EAL +F+ LR  + +L++R+++ +I GL K GR+  A  LF + L
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           P G L+ D + Y +MI +   +G ++++ +LFL ME  G   +    N ++   +   + 
Sbjct: 603 PSG-LVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDV 661

Query: 392 SKVVELLHRMDER 404
            +    L ++DE+
Sbjct: 662 RRAGTYLTKIDEK 674



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 207/389 (53%), Gaps = 22/389 (5%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
            + C PNV++Y+ +INGL + G    A  LF EM+ G G       P+ V Y ++IDGLC
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEML-GQG-----FPPNIVTYNSVIDGLC 185

Query: 72  KEGFVDKAKELLLQMKDKN----------------INPDVVTYNSVIRGFCYANDSNEAK 115
           K   +DKA+ +L QM DK                 + PDVVTY+ +I  +C      EA+
Sbjct: 186 KAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEAR 245

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            +F  M+ +G  P+  T+  ++      G + +   LL LMIQ G+     V+N L+  +
Sbjct: 246 NIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAY 305

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
                +++A   F+ M   G   NV +Y+ +I+  CK   +E A+S +S+M+S+G+ P +
Sbjct: 306 AKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDI 365

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           +T+ +L  GL  I + ++  KL  EM   G+  +     T +D LCK G ++EA + F  
Sbjct: 366 ITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQ 425

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+ SY+ LIDG C  G++  + +L   +    L  D VTY+ +++  C +G+
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +D A  L+ +M +K V P+ + +N ++ G
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNIILHG 514



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 193/393 (49%), Gaps = 33/393 (8%)

Query: 37  VALNLFEEMINGNGEFGV-VCKPDAVIYTTIIDGLCKEGFVDKAKE--------LLLQMK 87
           +A++LF  M     + GV     DA  +  +I   C  G +D A E         +  M 
Sbjct: 74  LAVSLFNTM----AQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMA 129

Query: 88  DKNIN--PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK--- 142
           D   N  P+V++YN VI G     + ++A  LF EM+ QG  PN+VT++ ++D LCK   
Sbjct: 130 DDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQA 189

Query: 143 -------------NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
                         G++EEA +LL+ M   G++P+   Y+ L+D +C  GR   A+ +F 
Sbjct: 190 MDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFD 249

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           SM   G   + ++Y  L++GY     +     L + M+  GI      +N L     +  
Sbjct: 250 SMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNE 309

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            +++A   F EM++ G + +   Y T ID LCK G + +A+  F  +       DI +++
Sbjct: 310 TLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFT 369

Query: 310 CLIDGLCKSGRLKIAWEL-FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
            LI GLC  G  K   +L F  + RG+   + +  N ++ +LC +G++ +AHD F  +  
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIH-PNAIFLNTIMDSLCKEGRVLEAHDFFDQIIH 428

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            GV PD V++  L+ G   + +  + ++LL RM
Sbjct: 429 VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 29/332 (8%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYAN-------DSNEAKRLFIEMM-DQGVQ--PNVVT 132
           + Q+    +  D  T+  +IR FC          + +   R  + MM D G    PNV++
Sbjct: 82  MAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLS 141

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++ L K G++++A  L   M+  G  PN   YN+++DG C    +++A+ +   M 
Sbjct: 142 YNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMF 201

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G                   ++E A+ L  +M   G++P VVTY+ L     +I +  
Sbjct: 202 DKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCT 242

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  +FD M R G   D + YRT + G    G +V+  +L   +      L+   ++ LI
Sbjct: 243 EARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILI 302

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
               K+  L  A   F  + +     +VVTY  +I  LC  G+++ A   F  M ++G++
Sbjct: 303 RAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLS 362

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           PD + F +L+ G     E  KV +L   M  R
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 16/259 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F ++   G +P+V++Y+ LI+G C  G    ++ L   M++      +  +PD 
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVS------IGLRPDN 470

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +++G CK G VD A  L  +M  K++ P+ +TYN ++ G  +A     A+  +++
Sbjct: 471 VTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF-----VYNTLMDGF 175
           ++D G+Q  + T+++++  LC+N  ++EA ++ +     G+R   F      +N ++ G 
Sbjct: 531 IVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ-----GLRSKEFQLEVRTFNIMIVGL 585

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
              GR+  AK LF ++   G   +   Y ++I  + +   +E +  L+  M   G     
Sbjct: 586 LKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANS 645

Query: 236 VTYNTLFIGLFEIHQVERA 254
            T N +   L E   V RA
Sbjct: 646 RTLNAIVRKLLEKGDVRRA 664


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/363 (38%), Positives = 207/363 (57%), Gaps = 6/363 (1%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y TLINGLC+ G +I A  L +EM       G V KP+ VIY  IID  CK+    KA
Sbjct: 190 VCYGTLINGLCKIGRSIDAFQLLQEM------EGQVVKPNIVIYNMIIDSFCKDELTCKA 243

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           ++L L++ D  I+PD++TY S+IRGFC      E K+L  EM+++ + PNV TF+V++D 
Sbjct: 244 RDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDA 303

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            C+ GKM EA  +  LM++ G +P+   +NTL+ G CL G V  A++LF ++   G   +
Sbjct: 304 FCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPD 363

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V+SY+ILI GYCK K I+ A+SL++EM  K +   +V Y++L  GL +  ++  A++LF 
Sbjct: 364 VWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFS 423

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            +   G   +   Y   ID  CK   I   +ELF+ +        + +Y+ LI+G CKS 
Sbjct: 424 TINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSK 483

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R++ A  L   +    L  D +TYN +   LC  G++  A +LF  M   G   D   +N
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYN 543

Query: 380 TLM 382
            L+
Sbjct: 544 VLL 546



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 223/433 (51%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A  LF  L      P+VI ++T+I  + +  H  VA++L ++M+               
Sbjct: 67  DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 126

Query: 50  ------GE-------FGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 GE        G+V K    P+ +  TT++ GLC  G V KA +    +  + + 
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            D V Y ++I G C    S +A +L  EM  Q V+PN+V +++I+D  CK+    +A  L
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              ++ +G+ P+   Y +L+ GFC TG+    K+L   M +     NV+++++LI+ +C+
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++  A  +++ M+ +G +P +VT+NTL  G      V  A KLFD +   G+  D W+
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I G CK   I EA+ LF  +R     LDI  YS LIDGLCKSGR+  AWELF ++ 
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 +V+TYNI+I A C    +D   +LF  M  KG+ P  + +N L+ G  ++    
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486

Query: 393 KVVELLHRMDERN 405
           + + LL  M  +N
Sbjct: 487 EAMNLLSVMQSKN 499



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 215/388 (55%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +PN IT +T++ GLC  G    A++ F + +   G        D V Y T+I+GLCK 
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMD-FHDNVAAQGML-----LDEVCYGTLINGLCKI 202

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A +LL +M+ + + P++V YN +I  FC    + +A+ L+++++D G+ P+++T+
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++   C+ G+  E  QL+  M+   + PN + +N L+D FC  G++  A+ +F  M  
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + ++ +++ LI+G+C +  +  A  L+  +  +GI P V +Y  L IG  +  +++ 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF+EM+   +  D   Y + IDGLCK+G I  A ELF T+       ++ +Y+ LID
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK   + +  ELF  +    L   V+TYNI+I+  C   ++ +A +L   M++K +AP
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D + +N+L  G  ++   S   EL   M
Sbjct: 503 DSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 6/216 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  +   G  P+V +Y+ LI G C+      A++LF EM   N         D 
Sbjct: 346 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVL------DI 399

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+++IDGLCK G +  A EL   + +    P+V+TYN +I  FC   D +    LF  
Sbjct: 400 VLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P V+T++++++  CK+ ++ EA  LL +M    + P++  YN+L DG C +GR
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ A ELF  M   G   +V +Y++L++ +CK +++
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 156/330 (47%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L   + +    P V+ +N++I           A  L  +M+ +GV P++ T S+
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++  C  G+M  A  +L ++++ G +PN     T+M G C+ G V +A +   ++ + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +   Y  LING CK      A  L  EM  + +KP +V YN +     +     +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L+ ++   G+  D   Y + I G C+ G   E  +L   +       ++ +++ LID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ G++  A  +F+ + +     D+VT+N +I   C  G + +A  LF  +  +G+ PD 
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            ++  L++G  +     + V L + M  +N
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKN 394



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N  ++A  LF  +++    P+V+ F+ I+  + K      A  LL+ M+  GV P+ F  
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +  ++ +C  G +  A  +   +   G + N  + + ++ G C N E++ A+  +  + +
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G+    V Y TL  GL +I +   AF+L  EM+   V  +   Y   ID  CK+    +
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L+  +  +  + DI +Y+ LI G C++G+     +L   +    +  +V T+N++I 
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           A C  GKM +A  +F  M  +G  PD V FNTL+ G C+  N
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 217/405 (53%), Gaps = 8/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   GC  N + Y+ LINGLC+  +   A  L EEM +   E      PD +
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE------PDNI 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--I 119
            Y TI+ GLC+ G V +AK+    M  +  +PDVV YN ++          EA  LF  +
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M D+ V P+++T++ ++D  C+  K +EA +L + +I  G  P+   YN+++ G     
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++ A+E+F  M   GC  N  +YSI+++G+C+   +   L LY EM  K   P V+  N
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +   L +  +V+ A K+ +EM + G   D   Y   +DGLCK   + +A ELF T+   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  DI SYS +++GLCK+ ++  A  LF  +    L+ DVVT+NI++  LC  GK+D+A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            DL   M    V PD V   TLM G  R+  T + V L   M E+
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461



 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 135/393 (34%), Positives = 221/393 (56%), Gaps = 8/393 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP+V+TYST+I+GLC+TG    AL + EEM     E GV   PD   YT I+D LC+ 
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMT----EKGV--NPDVATYTIIVDRLCRA 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD+A EL  +M ++  + + V YN++I G C   +   A +L  EM  +G +P+ +T+
Sbjct: 59  GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+  LC+ GK+ EA Q  + M   G  P+   YN L+D     G+V  A  LF +M+ 
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 194 MGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              K   ++ +Y+ LI+G+C+ ++ + A+ L+ ++++KG  P  VTYN++ +GL     +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A ++F +M   G A +   Y   + G C+ G +   LEL+  +   +   D+   + +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ID LCK+ ++  A ++   + +   + DVVTYNI++  LC    +DKAH+LF  M   G 
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           APD V+++ ++ G  + N+      L  RM ER
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 391



 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/390 (34%), Positives = 217/390 (55%), Gaps = 8/390 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ITY+TLI+G CR   T  A+ LF+++I   G       PD V Y +I+ GL ++  +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVI-AKGYM-----PDTVTYNSILLGLARKSNM 238

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A+E+  +M D    P+  TY+ V+ G C   +      L+ EM ++   P+V+  + +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D LCK  K+++A ++LE M +IG  P+   YN L+DG C T  V++A ELF +M   GC
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++ SYS+++NG CK  ++  A  L+  M+ + + P VVT+N L  GL +  +++ A  
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D M  H V  D     T + GLC++    EA+ LF+ +       D+  ++ ++ GLC
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478

Query: 317 KSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           + G+L  A   F S+ +  G    DVVTY  +++AL   G++D+A D F  M   G APD
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            VA+NTLM G  +     +   L   M E+
Sbjct: 539 YVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 214/401 (53%), Gaps = 8/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++ + G EP+ ITY+T+++GLCR G    A   F+ M +          PD V 
Sbjct: 99  AYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG------YSPDVVA 152

Query: 63  YTTIIDGLCKEGFVDKAKELL--LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           Y  ++D L KEG V +A  L   + M D+ + PD++TYN++I GFC    ++EA +LF +
Sbjct: 153 YNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKD 212

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +G  P+ VT++ I+  L +   M+EA ++ + M+  G  PN   Y+ ++ G C  G 
Sbjct: 213 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGN 272

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + R  EL+  M       +V   + +I+  CK K+++ A  +  EM   G  P VVTYN 
Sbjct: 273 MARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNI 332

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + + V++A +LF  M  +G A D  +Y   ++GLCK   + +A  LF  +   K
Sbjct: 333 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 392

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +++ L+DGLCK+G+L  A +L   +    ++ D VT   ++H LC D + D+A 
Sbjct: 393 LVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M  KG   D +  N ++ G  R  + ++ +     M
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 159/286 (55%), Gaps = 2/286 (0%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +P+VVT+S I+  LCK GK+ EA +++E M + GV P+   Y  ++D  C  G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A ELF  M   GC  N  +Y+ LING CK++ IE A  L  EM SKG +P  +TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL- 299
           +  GL  + +V  A + FD M   G + D  AY   +D L K G + EA  LF+T+ +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 300 -KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   D+ +Y+ LIDG C+  +   A +LF  +     + D VTYN ++  L     MD+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A ++F  M   G AP+   ++ ++ G  R    ++ +EL   M E+
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 43/237 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF+ +   GC P++++YS ++NGLC+T     A  LF+ MI    E  +V  PD V
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI----ERKLV--PDVV 398

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++DGLCK G +D+AK+LL  M + N+ PD VT  +++ G C    ++EA RLF  M
Sbjct: 399 TFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458

Query: 122 MDQGV-------------------------------------QPNVVTFSVIMDELCKNG 144
           +++G                                       P+VVT++ +++ L + G
Sbjct: 459 VEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           ++++A    + M   G  P+   YNTLM+G    GR  +A  L  +M+  G   + F
Sbjct: 519 RVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 217/381 (56%), Gaps = 6/381 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY TLINGL + G    AL+L +EM   +       +P+ V+Y+ +IDGLCK+GFV  A 
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L  Q+ ++ I  D VTYNS+I G C      E  +L  +M+ + V P+  TF++++D L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G++ EA  +L +M + G +P+   YN LM+G+C    V+ A+ELF  M   G + +V
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y++LI+GYCK K ++ A+ L+ E+ +K + PT+ +YN+L  GL    ++    KL DE
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M       D   Y   ID LCK G I+EAL +   +     + +I +Y+ ++DG C    
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           + +A ++F+ + +  L  D++ YN++I+  C    +D+A  LF +M  K + PD  ++N+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G         V ELL  M
Sbjct: 516 LIDGLCNLGRIPHVQELLDEM 536



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 218/404 (53%), Gaps = 7/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G +P+++TY+ L+ G C   +   A  LF  M+    E      PD 
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDV 335

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +IDG CK   VD+A  L  ++ +KN+ P + +YNS+I G C +   +  K+L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+VVT+++++D LCK G++ EA  +L +M++ GV+PN   YN +MDG+CL   
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN AK++F  M   G + ++ +Y++LINGYCK + ++ A+ L+ EM  K + P + +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL  + ++    +L DEM   G + D   Y   +D  CK     +A+ LFR + +  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +   ++D LCK  +LK+A +    L       +V TY I+I+ALC DG   +A 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L   ME     PD + F  ++   ++ NET K  +L   M  R
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 202/373 (54%), Gaps = 7/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +++   G   + +TY++LI+G C  G       L  +M+  N +      PD  
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD------PDDY 266

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ +L  M  +   PD+VTYN+++ G+C   + +EA+ LF  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+V+ ++V++D  CK   ++EA  L + +    + P    YN+L+DG C +GR+
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  K+L   M       +V +Y+ILI+  CK   I  AL +   M+ KG+KP +VTYN +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G    + V  A  +F+ M + G+  D   Y   I+G CK   + EA+ LF+ +R    
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+ LIDGLC  GR+    EL   +       DV+TYNI++ A C     DKA  
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 362 LFLDMEAKGVAPD 374
           LF  +  +G+ PD
Sbjct: 567 LFRQI-VEGIWPD 578



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 210/403 (52%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   G +PN++T++T+ING C  G    AL+  + ++     F      D   
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF------DQFT 162

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GL K G +  A  LL +M+  ++ P++V Y+++I G C     ++A  L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+  + VT++ ++D  C  G+ +E +QLL  M++  V P+ + +N L+D  C  GR+ 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ +   M   G K ++ +Y+ L+ GYC  + +  A  L++ M+ +G++P V+ YN L 
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   V+ A  LF E+    +     +Y + IDGLC +G I    +L   +      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LID LCK GR+  A  +   + +  +  ++VTYN M+   C    ++ A D+
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F  M   G+ PD + +N L+ G  +     + + L   M  +N
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 198/418 (47%), Gaps = 30/418 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN-----GEFGVVC 56
           +A   F ++      P    +  L+  + R GH   A++LF ++ +         F ++ 
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +P+ V + TII+G C  G + KA +    +  +   
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            D  TY ++I G         A  L  EM    VQPN+V +S ++D LCK+G + +A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              + + G+  +A  YN+L+DG C  GR     +L   M       + ++++ILI+  CK
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I  A  + + M  +G KP +VTYN L  G      V  A +LF+ M + G+  D   
Sbjct: 278 EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLN 337

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   IDG CK   + EA+ LF+ L        I SY+ LIDGLC SGR+    +L   + 
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
                 DVVTYNI+I ALC +G++ +A  + + M  KGV P+ V +N +M G C+RNN
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR  +   A+  F  M+       V   P   ++  ++  + + G    A  L  Q++ K
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            I+P + T+  +I  + + + +  A  L   ++  G QPN+VTF+ I++  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
               + ++  G   + F Y TL++G    G++  A  L   ME    + N+  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK+  +  AL L S++  +GI    VTYN+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            + +   ID LCK G I+EA  +   +     + DI +Y+ L++G C    +  A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L  DV+ YN++I   C    +D+A  LF ++  K + P   ++N+L+ G   + 
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 390 ETSKVVELLHRM 401
             S V +LL  M
Sbjct: 385 RISHVKKLLDEM 396



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 7/266 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G +PN++TY+ +++G C   +  VA ++F  M+    E      PD 
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDI 475

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+G CK   VD+A  L  +M+ KN+ PD+ +YNS+I G C        + L  E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G  P+V+T+++++D  CK    ++A  L   +++ G+ P+ +  + ++D  C   +
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++    +   GC  NV +Y+ILIN  CK+     A+ L S+M      P  +T+  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   L + ++ ++A KL +EM   G+
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 35/299 (11%)

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+   +++A      M+++   P   V++ L+      G    A  LF  ++S G   ++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +++ILIN Y        A SL + +L  G +P +VT+NT+  G      + +A      
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           +   G   D + Y T I+GL KNG I  AL L + +     + ++  YS LIDGLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 321 LKIAWELFHSL-PRGVLI----------------------------------ADVVTYNI 345
           +  A  L   +  RG+L+                                   D  T+NI
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I ALC +G++ +A  +   M  +G  PD V +N LM G        +  EL +RM +R
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL++++ SKGI P++ T+  L    F       AF L   + + G   +   + T I+
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIIN 133

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G C NG I +AL+  + L       D  +Y  LI+GL K+G++K A  L   + +  +  
Sbjct: 134 GFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQP 193

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           ++V Y+ +I  LC DG +  A  L   +  +G+  D V +N+L+ GC       +V +LL
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253

Query: 399 HRMDERN 405
            +M   N
Sbjct: 254 TKMVREN 260


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 196/320 (61%), Gaps = 6/320 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F ++ A G +PN+ TY+T+I G C+ G T VA+ L ++M    G      +PD V
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG------RPDIV 225

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK+  V +A ++  ++K K + PDV TY+ ++ G C ++   EA  LF EM
Sbjct: 226 IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM 285

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + P+VVTF++++D+LCK G + EA  ++++MI+ GV PN   YN+LM+G+CL  +V
Sbjct: 286 MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKV 345

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +F +M + GC  NV SY+ILINGYCK + I+ A  L+ EM  +G+ P    YNTL
Sbjct: 346 FEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTL 405

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A +LF +MQ  G + D       +D LCK GY+  AL LFR ++    
Sbjct: 406 ISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465

Query: 302 ELDIRSYSCLIDGLCKSGRL 321
           + ++ +Y  LI  + KSG++
Sbjct: 466 KPNLVTYDILIRAMYKSGKI 485



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 195/368 (52%), Gaps = 10/368 (2%)

Query: 17  PNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           P ++ +  L++ L R  H  T+++L+   E++          + D   +  +I+   +  
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLR--------IERDVFHFNILINCFSRLQ 133

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD A  +L ++      PD VT++S+I G C+ +    A   F EM+  G QPN+ T++
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            I+   CK GK   A  LL+ M + G RP+  +YNT++DG C    V+ A ++F  ++  
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G + +VF+YSIL++G C + + E A +L++EM+S  I P VVT+N L   L +   +  A
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             +   M   GV  +   Y + ++G C    + EA  +F  +    C  ++ SY+ LI+G
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK+ R+  A ELF  +    LI +   YN +I  LC  G+  +A +LF DM+A+G +PD
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPD 433

Query: 375 CVAFNTLM 382
            V    L+
Sbjct: 434 LVTCTILL 441



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 193/378 (51%), Gaps = 6/378 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  +++    E +V  ++ LIN   R      A ++  ++I    E      PDAV ++
Sbjct: 105 SLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFE------PDAVTFS 158

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I+GLC E    +A E   +M      P++ TYN++I+GFC    +  A  L  +M   
Sbjct: 159 SLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKA 218

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P++V ++ I+D LCK+  + EA  +   +   GVRP+ F Y+ LM G C + +   A
Sbjct: 219 GGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEA 278

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  M S+    +V +++IL++  CK   +  A  +   M+ KG++P   TYN+L  G
Sbjct: 279 SALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
               ++V  A  +FD M   G   +  +Y   I+G CK   I EA ELF  +       +
Sbjct: 339 YCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPN 398

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI GLC++GR   A ELF  +       D+VT  I++ +LC  G +D A  LF 
Sbjct: 399 TFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFR 458

Query: 365 DMEAKGVAPDCVAFNTLM 382
            M+   + P+ V ++ L+
Sbjct: 459 AMQDSCLKPNLVTYDILI 476



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 151/252 (59%), Gaps = 6/252 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F+++K  G  P+V TYS L++GLC +     A  LF EM++ N        PD V
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN------IMPDVV 295

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++D LCKEG + +A+ ++  M +K + P+  TYNS++ G+C  N   EA+ +F  M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNVV+++++++  CK  +++EA +L + M   G+ PN F YNTL+ G C  GR 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ELF  M++ GC  ++ + +IL++  CK   ++ AL L+  M    +KP +VTY+ L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 242 FIGLFEIHQVER 253
              +++  ++ R
Sbjct: 476 IRAMYKSGKIYR 487



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 143/279 (51%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  F+++++   +  +++ A  +L  +I++G  P+A  +++L++G C   +  RA 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E F  M + G + N+ +Y+ +I G+CK  +   A+ L  +M   G +P +V YNT+  GL
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V  A  +F E++  GV  D + Y   + GLC +    EA  LF  +  L    D+
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ L+D LCK G L  A  +   +    +  +  TYN +++  C   K+ +A  +F  
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KG  P+ V++N L+ G  +     +  EL   M  R
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%)

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C    +E+A      MI     P    ++ L+              L   +E +  + +V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           F ++ILIN + + + ++ A S+  +++  G +P  VT+++L  GL    +  RA + FDE
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M   G   +   Y T I G CK G    A+ L + +       DI  Y+ +IDGLCK   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A ++F  +    +  DV TY+I++H LC   + ++A  LF +M +  + PD V FN 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 381 LM 382
           L+
Sbjct: 300 LV 301



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +  +  L++   + K     LSL   +    I+  V  +N L      + +V+ AF +  
Sbjct: 84  IVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLG 143

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           ++ + G   D   + + I+GLC       A+E F  +     + ++ +Y+ +I G CK G
Sbjct: 144 KIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +  +A  L   + +     D+V YN +I  LC D  + +A D+F +++ KGV PD   ++
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            LM G   +++  +   L + M
Sbjct: 264 ILMHGLCNSDQKEEASALFNEM 285


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 215/405 (53%), Gaps = 11/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + + GC PNV+TYS LINGLC+ G    A  L +EM   + +      P+ +
Sbjct: 90  EARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 145

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN--INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y + +DGLCK+    +A EL+  ++D +  ++PD VT++++I G C     +EA  +F 
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNV+T++ +++ LCK  KME A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 180 RVNRAKELFVSMESMGCKHNVF-----SYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           RV+ A EL   M S GC  NV      +++ILI G CK    E A +L+ EM++K ++P 
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V+T+  L  GL +  QVE A  + D M   GV  +   Y   + GLCK+G I EA +   
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  D  +Y  L+  LC++ R   A +L   L       D VTYNI++  L   G
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           K ++A  +  +M  KG  PD   F     G  R+   +  +ELL 
Sbjct: 446 KTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 221/405 (54%), Gaps = 15/405 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +L   G  P+V+TY+TLI+ LC+ G    A  L  +M +        C P+ V Y+ 
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG------CVPNVVTYSV 112

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN--PDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           +I+GLCK G +D+A+EL+ +M  K+ +  P+++TYNS + G C  + + EA  L   + D
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172

Query: 124 QG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+ VTFS ++D LCK G+++EA  + + MI  G  PN   YN L++G C   ++
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV-----V 236
            RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P V     V
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV 292

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+N L  G  +    E+A  LF+EM    +  D   +   IDGLCK G +  A ++   +
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 352

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             L    ++ +Y+ L+ GLCKSGR++ A +    +     + D +TY  +++ALC   + 
Sbjct: 353 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 412

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D A  L  ++++ G  PD V +N L+ G  ++ +T + + +L  M
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/392 (33%), Positives = 208/392 (53%), Gaps = 14/392 (3%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
           V  Y+ ++  LCR G T  AL +F   +  +G       P  V Y TII+GLCK   +  
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDG-----VAPTIVTYNTIINGLCKSNDLGA 55

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
             EL  ++ ++  +PDVVTYN++I   C A D  EA+RL  +M  +G  PNVVT+SV+++
Sbjct: 56  GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLIN 115

Query: 139 ELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--SM 194
            LCK G+++EA +L++ M +    V PN   YN+ +DG C       A EL  S+   S+
Sbjct: 116 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 175

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               +  ++S LI+G CK  +I+ A S++ +M++ G  P V+TYN L  GL +  ++ERA
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 235

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR-----SYS 309
             + + M   GV  D   Y   +D  CK   + EALEL   +    C  ++      +++
Sbjct: 236 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFN 295

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI G CK+G  + A  LF  +    L  DV+T+  +I  LC  G+++ A D+   M   
Sbjct: 296 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           GV P+ V +N L+ G  ++    +  + L  M
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 387



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/325 (35%), Positives = 178/325 (54%), Gaps = 11/325 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  + A G  PNVITY+ L+NGLC+      A  + E M++     GV   PD +
Sbjct: 199 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK----GVT--PDVI 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV-----VTYNSVIRGFCYANDSNEAKR 116
            Y+ ++D  CK   VD+A ELL  M  +   P+V     VT+N +I G C A +  +A  
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM+ + +QP+V+TF  ++D LCK G++E A  +L+LM  +GV PN   YN L+ G C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +GR+  A +    M S GC  +  +Y  L+   C+    + AL L SE+ S G  P  V
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN L  GL++  + E+A  + +EM   G   D++ +     GL ++G +   +EL R +
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492

Query: 297 RILKCELDIRSYSCLIDGLCKSGRL 321
                  D  + S ++D +C+SG+L
Sbjct: 493 LAKGMLPDATTCSSILDWVCRSGKL 517



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 12/322 (3%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFI-EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           V  YN V++  C A D+  A  +F  EM   GV P +VT++ I++ LCK+  +    +L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           E +++ G  P+   YNTL+D  C  G +  A+ L   M S GC  NV +YS+LING CK 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 214 KEIEGALSLYSEMLSKG--IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAA 268
             I+ A  L  EM  K   + P ++TYN+   GL +      A +L   + R G   V+ 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSP 179

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           DT  + T IDGLCK G I EA  +F  +       ++ +Y+ L++GLCK+ +++ A  + 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG-----VAPDCVAFNTLML 383
            S+    +  DV+TY++++ A C   ++D+A +L   M ++G     + PD V FN L+ 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G  +     +   L   M  +N
Sbjct: 300 GACKAGNFEQASALFEEMVAKN 321



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 125/224 (55%), Gaps = 6/224 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ALF ++ A   +P+V+T+  LI+GLC+ G    A ++ + M    G  GV   P+ V
Sbjct: 309 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM----GNLGV--PPNVV 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCK G +++A + L +M      PD +TY S++   C A+ +++A +L  E+
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ VT+++++D L K+GK E+A  +LE M+  G +P++F +     G   +G +
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
               EL   + + G   +  + S +++  C++ +++   ++  E
Sbjct: 483 AGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 99/180 (55%), Gaps = 6/180 (3%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G  PNV+TY+ L++GLC++G    A    EEM++        C PD++ Y +++  LC+
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG------CVPDSITYGSLVYALCR 408

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
               D A +L+ ++K    +PD VTYN ++ G   +  + +A  +  EM+ +G QP+  T
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+     L ++G +    +LL +++  G+ P+A   ++++D  C +G+++  K +    E
Sbjct: 469 FAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/401 (33%), Positives = 226/401 (56%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +P+ +T++TL++GL +      A+ L E M+         C+PD V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 216

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCK G  D A  LL +M+   I  DVV YN++I G C     ++A  LF +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+V T++ ++  LC  G+  +AS+LL  M++  + P+   +N L+D F   G++
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A++L+  M +S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+    VTY T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G F+    + A  +F +M   GV  D   Y   +DGLC NG +  AL +F  ++   
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LDI +Y+ +I+ LCK+G+++  W+LF SL    +  +VVTY  M+   C  G  ++A 
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF++M+  G  P+   +NTL+   +R+ + +   EL+  M
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557



 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 207/378 (54%), Gaps = 7/378 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY  +INGLC+ G   +ALNL  +M  G  E       D V
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 251

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY TIIDGLCK   +D A +L  +M+ K I PDV TYN +I   C     ++A RL  +M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           +++ + P++V F+ ++D   K GK+ EA +L + M++     P+   YNTL+ GFC   R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    E+F  M   G   N  +Y+ LI+G+ + ++ + A  ++ +M+S G+ P ++TYN 
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL     VE A  +F+ MQ+  +  D   Y T I+ LCK G + +  +LF +L +  
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ +Y+ ++ G C+ G  + A  LF  +     + +  TYN +I A   DG    + 
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551

Query: 361 DLFLDMEAKGVAPDCVAF 378
           +L  +M + G A D   F
Sbjct: 552 ELIKEMRSCGFAGDASTF 569



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 205/402 (50%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  K+   G  P+++T ++L+NG C       A+ L ++M+    E G   +PD V 
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV----EMGY--QPDTVT 182

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++ GL +     +A  L+ +M  K   PD+VTY +VI G C   + + A  L  +M 
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++ +VV ++ I+D LCK   M++A  L   M   G++P+ F YN L+   C  GR +
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVVTYNTL 241
            A  L   M       ++  ++ LI+ + K  ++  A  LY EM+ SK   P VV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +VE   ++F EM + G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ L+DGLC +G ++ A  +F  + +  +  D+VTY  MI ALC  GK++   D
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  +  KGV P+ V + T+M G  R     +   L   M E
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 202/405 (49%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +      P+++ +S L++ + +     + ++L E+M N     G+    +  
Sbjct: 58  DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLY 111

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+  I+  C+   +  A  +L +M      P +VT NS++ GFC+ N  +EA  L  +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G QP+ VTF+ ++  L ++ K  EA  L+E M+  G +P+   Y  +++G C  G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ME    + +V  Y+ +I+G CK K ++ A  L+++M +KGIKP V TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILK 300
              L    +   A +L  +M    +  D   +   ID   K G +VEA +L+   ++   
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D+ +Y+ LI G CK  R++   E+F  + +  L+ + VTY  +IH        D A 
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +F  M + GV PD + +N L+ G   N      + +   M +R+
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 8/321 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K++  G +P+V TY+ LI+ LC  G    A  L  +M+  N        PD V
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN------INPDLV 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +  +ID   KEG + +A++L  +M K K+  PDVV YN++I+GFC      E   +F E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+  N VT++ ++    +    + A  + + M+  GV P+   YN L+DG C  G 
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +F  M+    K ++ +Y+ +I   CK  ++E    L+  +  KG+KP VVTY T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G       E A  LF EM+  G   ++  Y T I    ++G    + EL + +R   
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561

Query: 301 CELDIRSYSCLIDGLCKSGRL 321
              D  ++  L+  +   GRL
Sbjct: 562 FAGDASTFG-LVTNMLHDGRL 581



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 171/330 (51%), Gaps = 1/330 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A  L   M      P +V ++ ++      N  +    L  +M + G+  N+ T+S+
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++  C+  ++  A  +L  M+++G  P+    N+L++GFC   R++ A  L   M  MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +  +++ L++G  ++ +   A++L   M+ KG +P +VTY  +  GL +  + + A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L ++M++  + AD   Y T IDGLCK  ++ +A +LF  +     + D+ +Y+ LI  L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPD 374
           C  GR   A  L   +    +  D+V +N +I A   +GK+ +A  L+ +M ++K   PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            VA+NTL+ G  +     + +E+   M +R
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 135/261 (51%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+++A  L   M++    P+   ++ L+       + +    L   M+++G  HN+++YS
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I IN +C+  ++  AL++  +M+  G  P++VT N+L  G    +++  A  L D+M   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   DT  + T + GL ++    EA+ L   + +  C+ D+ +Y  +I+GLCK G   +A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + + +G + ADVV YN +I  LC    MD A DLF  ME KG+ PD   +N L+  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 385 CIRNNETSKVVELLHRMDERN 405
                  S    LL  M E+N
Sbjct: 295 LCNYGRWSDASRLLSDMLEKN 315


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  254 bits (649), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 224/391 (57%), Gaps = 9/391 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+++TYST+ING C+ G    A  +  EM+  +G       PD V YT+++DGLC++G +
Sbjct: 43  PDLVTYSTVINGFCKQGEMDRACEILREMVTRDG-----MAPDVVTYTSVVDGLCRDGKM 97

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A E++ +MK K + PD  T++++I G+C A   +EA +L+ E++    + + V+ S +
Sbjct: 98  DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSAL 157

Query: 137 MDELCKNGKMEEASQL---LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +  LC+  ++ EA +L   +E+      +P+   Y  L+DGFC +G + +A ++   ME 
Sbjct: 158 ITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 217

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             C  NV +YS L++G CK  +++ AL L+  M SKG  P VVTY TL  GL   H+V+ 
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L DEM      ADT +Y   +DG C+ G I EA +LF+ +    C  D  +Y+CL+ 
Sbjct: 278 ARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVR 337

Query: 314 GLCKSGRLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           G C + RL+ A  L  ++     I  DVVTY+I++       +  +A +   +M A+ VA
Sbjct: 338 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 397

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           P+ V +++L+ G  +    +  +E+L  +D+
Sbjct: 398 PNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/405 (33%), Positives = 211/405 (52%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L+ ++    C  + ++ S LI GLCR      A  LF+EM +  +G +    KPD 
Sbjct: 134 EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW----KPDV 189

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +IDG CK G ++KA ++L  M+ +   P+VVTY+S++ G C A D ++A  LF  
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PNVVT++ ++  LC   K++ A  L++ M       +   YN L+DG+C  GR
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYN 239
           +  AK+LF  M +  C  +  +Y+ L+ G+C    +E A  L   M  + GI P VVTY+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  G     +   A +   EM    VA +   Y + IDGLCK G +  A+E+ + +   
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-- 427

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+ +Y+ +I+GLC + R + A  L   +    +   V T+N +I ALC  G MD+A
Sbjct: 428 --KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L + M A G+ P  V + TL+ G  R        EL   M  +
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 187/332 (56%), Gaps = 5/332 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKR 116
           P+   Y  +++GLCK     KA E+L +M+D K++ PD+VTY++VI GFC   + + A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 117 LFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +  EM+ + G+ P+VVT++ ++D LC++GKM+ A +++  M   GV P+ F ++ L+ G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIK 232
           C   +V+ A +L+  + +  C+ +  S S LI G C+ + I  A  L+ EM  +     K
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTY  L  G  +   +E+A K+   M+      +   Y + + GLCK G + +AL+L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           FR +    C  ++ +Y+ LI GLC + ++  A  L   +      AD V+YN ++   C 
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            G++++A  LF +M AK   PD + +  L+ G
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG 338



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 187/339 (55%), Gaps = 20/339 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ + GC PNV+TY+TLI+GLC       A  L +EM          C  D V
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------ATCCPADTV 295

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DG C+ G +++AK+L  +M  K+  PD +TY  ++RGFC A+   EA R  +E 
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLEN 354

Query: 122 MDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M    G+ P+VVT+S+++    +  +  EA++ ++ MI   V PNA  Y++L+DG C  G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RVN A E+  +++    K +V +Y+I+I G C     E AL+L  EM++K ++P+V T+N
Sbjct: 415 RVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           ++   L  +  ++ A+KL   M  HG+      Y T ++G  + G +  A ELF  +R  
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530

Query: 300 KCE-------LDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             +       +  +++S LI GLCK+  +  A  +   L
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 569



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 180/320 (56%), Gaps = 5/320 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD-QGVQPNVVTFSVIMDELCKNGKMEEA 149
           + P+  TYN V+ G C A  +++A  +  EM D + V P++VT+S +++  CK G+M+ A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 150 SQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            ++L E++ + G+ P+   Y +++DG C  G+++RA E+   M+  G + + F++S LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+C  ++++ AL LY E+L+   +   V+ + L  GL    ++  A++LF EM+     A
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 269 ---DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   Y   IDG CK+G + +A+++   +   KC  ++ +YS L+ GLCK+G L  A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF  +     + +VVTY  +IH LCA  K+D A  L  +M A     D V++N L+ G 
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 386 IRNNETSKVVELLHRMDERN 405
            R     +  +L   M  ++
Sbjct: 305 CRLGRIEEAKQLFKEMAAKS 324



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 201/398 (50%), Gaps = 21/398 (5%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+TYS+L++GLC+ G    AL+LF  M +        C P+ V YTT+I GLC   
Sbjct: 220 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG------CVPNVVTYTTLIHGLCAAH 273

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD A+ L+ +M       D V+YN+++ G+C      EAK+LF EM  +   P+ +T++
Sbjct: 274 KVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYT 333

Query: 135 VIMDELCKNGKMEEASQLLELM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            ++   C   ++EEA  LLE M    G+ P+   Y+ ++ G+    R   A E    M +
Sbjct: 334 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 393

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                N  +YS LI+G CK   +  A+    E+L    KP VVTY  +  GL    + E 
Sbjct: 394 RNVAPNAVTYSSLIDGLCKAGRVNHAM----EVLKNVDKPDVVTYTIVIEGLCGTDRTEE 449

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L +EM    V      + + I  LC+ G + EA +L   +     E  + +Y+ L++
Sbjct: 450 ALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 509

Query: 314 GLCKSGRLKIAWELFHSLPRGV----LIADVV---TYNIMIHALCADGKMDKAHDLFLDM 366
           G  ++GR++IA+ELF  + R        A++V    ++ +I  LC   ++DKA  +  ++
Sbjct: 510 GFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 569

Query: 367 EAKGVAP---DCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++   P   DC+A    +L   R  E  K++  + ++
Sbjct: 570 RSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 149/274 (54%), Gaps = 20/274 (7%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  L   +K A G +P+V+TYS ++ G  R    + A    +EMI  N        P+A
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN------VAPNA 400

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V Y+++IDGLCK G V+ A E+L     KN++ PDVVTY  VI G C  + + EA  L  
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLE 455

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+++ V+P+V TF+ ++  LC+ G M+EA +LL  M   G+ P    Y TL++GF  TG
Sbjct: 456 EMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515

Query: 180 RVNRAKELFVSMESMGCKHNVFS-------YSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           R+  A ELF  M     K +  +       +S LI G CK +EI+ A+++  E+ S+  +
Sbjct: 516 RMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 575

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           P       +  GL    + E A KL + + + G+
Sbjct: 576 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 223/393 (56%), Gaps = 5/393 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FGC  + ++ + +++G C+ G    ALN  +EM N +G F     PD   + T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G V  A E++  M  +  +PDV TYNSVI G C   +  EA     +M+ +   PN VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LCK  ++EEA++L  ++   G+ P+   +N+L+ G CLT     A ELF  M 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S GC+ + F+Y++LI+  C   +++ AL++  +M   G   +V+TYNTL  G  + +++ 
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++FDEM+ HGV+ ++  Y T IDGLCK+  + +A +L   + +   + D  +Y+ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
              C+ G +K A ++  ++       D+VTY  +I  LC  G+++ A  L   ++ KG+A
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIA 607

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               A+N ++ G  R  +T++ + L   M E+N
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 169/299 (56%), Gaps = 15/299 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   L + G  P+V T+++LI GLC T +  VA+ LFEEM +        C+PD  
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC +G +D+A  +L QM+       V+TYN++I GFC AN   EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N VT++ ++D LCK+ ++E+ASQL++ MI  G +P+ F YN+L+  FC  G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDI 556

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M S GC+ ++ +Y  LI+G CK   +E A  L   +  KGI  T   YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPV 616

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNG--------YIVEALE 291
             GLF   +   A  LF EM +++  A D  +YR    GLC  G        ++VE LE
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 10/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L +K   F  EP +  Y  ++  L R+G       + E+M N   E G    P    +  
Sbjct: 72  LASKKPNFSPEPAL--YEEILLRLGRSGSFDDMRKILEDMKNSGCEMGT--SP----FLI 123

Query: 66  IIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +I+   +    D+   ++  M D   + PD   YN ++      N+    +    +M   
Sbjct: 124 LIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVW 183

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+V TF+V++  LC+  ++  A  +LE M   G+ P+   + T+M G+   G ++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFI 243
             +   M   GC  +  S +++++G+CK   +E AL+   EM ++ G  P   T+NTL  
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL +   V+ A ++ D M + G   D + Y + I GLCK G + EA+E    +    C  
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  +Y+ LI  LCK  +++ A EL   L    ++ DV T+N +I  LC       A +LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +M +KG  PD   +N L+       +  + + +L +M+
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 79/200 (39%), Gaps = 2/200 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L++      +   AL L++    K    P    Y  + + L      +   K+ ++M+  
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFR-TLRILKCELDIRSYSCLIDGLCKSGRLKI 323
           G    T  +   I+   +     E L +    +     + D   Y+ +++ L     LK+
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
                  +    +  DV T+N++I ALC   ++  A  +  DM + G+ PD   F T+M 
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232

Query: 384 GCIRNNETSKVVELLHRMDE 403
           G I   +    + +  +M E
Sbjct: 233 GYIEEGDLDGALRIREQMVE 252


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 193/330 (58%), Gaps = 6/330 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K    G +P+V+TY TL+NGLC+ G+T  A+ L   M+  N      C+P+ +
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVI 253

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIID LCK+  V +A  L  +M  K I+PD+ TYNS+I   C   +      L  EM
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 313

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV FS ++D LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   +
Sbjct: 314 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+    VTYNTL
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     
Sbjct: 434 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           + DI  Y+  IDG+C++G L+ A +LF +L
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 204/370 (55%), Gaps = 6/370 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  KL   GC+P+  T++TLI GLC  G    AL+LF++ I G G      +PD V 
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI-GEG-----FQPDVVT 219

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+++GLCK G    A  LL  M  KN  P+V+ YN++I   C      EA  LF EM+
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P++ T++ ++  LC   + +  + LL  M+   + PN  V++T++D  C  G + 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G + +V +Y+ L++G+C   E++ A+ ++  M+ KG  P V +YN L 
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 399

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +I ++++A  L ++M   G+ ADT  Y T I GLC  G +  A+ LF  +      
Sbjct: 400 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 459

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y  L+D LCK+  L  A  L  ++    L AD++ YNI I  +C  G+++ A DL
Sbjct: 460 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 519

Query: 363 FLDMEAKGVA 372
           F ++  +G A
Sbjct: 520 FSNLSCQGFA 529



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P+ + ++ L+  + +  H    L+L  +M      FG+   PD  
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 148

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+  C    +  A  +L ++      PD  T+N++IRG C      EA  LF + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VVT+  +M+ LCK G    A +LL  M+Q   RPN   YNT++D  C   +V
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++F+Y+ LI+  C   E +   +L +EM++  I P VV ++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   +  A  + D M + GV  D   Y   +DG C    + EA+++F T+    C
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++RSY+ LI+G C+  R+  A  L   +    LIAD VTYN +IH LC  G++  A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF +M A G  PD V +  L+    +N+  ++ + LL  ++  N
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 492



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 197/397 (49%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L T++ +FG  P+V T + LIN  C       A ++  +++    + G  C+PD   + 
Sbjct: 133 SLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL----KLG--CQPDNTTFN 186

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC EG + +A  L  +   +   PDVVTY +++ G C   +++ A RL   M+ +
Sbjct: 187 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 246

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
             +PNV+ ++ I+D LCK+ ++ EA  L   MI  G+ P+ F YN+L+   C        
Sbjct: 247 NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 306

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M +     NV  +S +++  CK   I  A  +   M+ +G++P VVTY  L  G
Sbjct: 307 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 366

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +++ A K+FD M   G   +  +Y   I+G C+   + +A+ L   + +     D
Sbjct: 367 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 426

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI GLC  GRL+ A  LFH +     I D+VTY I++  LC +  + +A  L  
Sbjct: 427 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 486

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +E   +  D + +N  + G  R  E     +L   +
Sbjct: 487 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 144/267 (53%), Gaps = 6/267 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++   G  P++ TY++LI+ LC          L  EM+N          P+ V
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVV 323

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +++T++D LCKEG +  A +++  M  + + PDVVTY +++ G C  ++ +EA ++F  M
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 383

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV +++++++  C+  +M++A  LLE M   G+  +   YNTL+ G C  GR+
Sbjct: 384 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 443

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M + G   ++ +Y IL++  CKN  +  A+ L   +    +   ++ YN  
Sbjct: 444 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 503

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA 268
             G+    ++E A  LF  +   G AA
Sbjct: 504 IDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 159/361 (44%), Gaps = 35/361 (9%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A     +M   +  P  V +  ++         +    L  +M   G+ P+V T ++
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C   ++  A  +L  ++++G +P+   +NTL+ G C+ G++  A  LF      G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +V +Y  L+NG CK      A+ L   M+ K  +P V+ YNT+   L +  QV  AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 256 KLFDEMQRHGVAADTWAY-----------------------------------RTFIDGL 280
            LF EM   G++ D + Y                                    T +D L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G I  A ++   +     E D+ +Y+ L+DG C    +  A ++F ++     + +V
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +YNI+I+  C   +MDKA  L   M  +G+  D V +NTL+ G          + L H 
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 401 M 401
           M
Sbjct: 453 M 453



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 10/299 (3%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNA 165
           N  ++A   F  M+     P+ V F+ ++  +    KM+  S +L L  Q+   G+ P+ 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDV 147

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           +  N L++ FC   R+  A  +   +  +GC+ +  +++ LI G C   +I  AL L+ +
Sbjct: 148 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 207

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            + +G +P VVTY TL  GL ++     A +L   M +     +  AY T ID LCK+  
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  LF  +       DI +Y+ LI  LC     K    L + +    ++ +VV ++ 
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRN--NETSKVVE-LLHR 400
           ++ ALC +G +  AHD+   M  +GV PD V +  LM G C+R+  +E  KV + ++H+
Sbjct: 328 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 35/190 (18%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ ML     P+ V +  L   + ++        L  +M   G+  D +    
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY---- 148

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
                              TL IL            I+  C   RL  A+ +   L +  
Sbjct: 149 -------------------TLNIL------------INSFCHLRRLGYAFSVLAKLLKLG 177

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              D  T+N +I  LC +GK+ +A  LF     +G  PD V + TLM G  +   TS  +
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237

Query: 396 ELLHRMDERN 405
            LL  M ++N
Sbjct: 238 RLLRSMVQKN 247


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 228/435 (52%), Gaps = 31/435 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------EFGV 54
           MEA  +F  +   G +P + TY TL+ G    G  +    L + M+  NG       F +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSI 376

Query: 55  -VC-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
            +C                        P+AV Y  +I  LCK G V+ A     QM D+ 
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           ++P  + YNS+I G C  N    A+ L +EM+D+G+  N + F+ I+D  CK G++ E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L ELM++IGV+PN   YNTL++G+CL G+++ A +L   M S+G K N  +YS LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +   G   + 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   + GLCKN    +AL++F+ L ++  +L+ R+++ +ID L K GR   A +LF +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                L+ +  TY +M   +   G +++   LFL ME  G   D    N ++   ++  E
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 391 TSKVVELLHRMDERN 405
            ++    L  +DE++
Sbjct: 737 ITRAGTYLSMIDEKH 751



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 228/428 (53%), Gaps = 41/428 (9%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T+ING  + G +  A + + EM+    + G++  PD V Y +II  L
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYNSIIAAL 241

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA E+L  M    + PD +TYNS++ G+C +    EA     +M   GV+P+V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301

Query: 131 VTFSVIMDELCKNGKMEEASQ-----------------------------------LLEL 155
           VT+S++MD LCKNG+  EA +                                   LL+L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G+ P+ +V++ L+  +   G+V++A  +F  M   G   N  +Y  +I   CK+  
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E A+  + +M+ +G+ P  + YN+L  GL   ++ ERA +L  EM   G+  +T  + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID  CK G ++E+ +LF  +  +  + ++ +Y+ LI+G C +G++  A +L   +    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L  + VTY+ +I+  C   +M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 396 ELLHRMDE 403
           EL  R+ E
Sbjct: 602 ELYVRITE 609



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 201/393 (51%), Gaps = 9/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TYS L++ LC+ G  + A  +F+ M           KP+  
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+PD   ++ +I  +      ++A  +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN VT+  ++  LCK+G++E+A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP V+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  +T  Y T I+G CK   + +AL LF+ +     
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 362 LFLDMEAKGVAPDCVAFNTL---MLGCIRNNET 391
           +F ++    +  +   FN +   +L   RN+E 
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 208/444 (46%), Gaps = 51/444 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   P++ TY  LI   CR G   +       +I          + D
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKG------FRVD 121

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M +    P+V +YN +++G C  N S EA  L 
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELL 181

Query: 118 -------------------------------------FIEMMDQGVQPNVVTFSVIMDEL 140
                                                + EM+D+G+ P+VVT++ I+  L
Sbjct: 182 HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAAL 241

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK   M++A ++L  M++ GV P+   YN+++ G+C +G+   A      M S G + +V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +YS+L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D 
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M R+G+  D + +   I      G + +A+ +F  +R      +  +Y  +I  LCKSGR
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++ A   F  +    L    + YN +IH LC   K ++A +L L+M  +G+  + + FN+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 381 LMLGCIRNN---ETSKVVELLHRM 401
           ++    +     E+ K+ EL+ R+
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRI 505



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 4/318 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD+ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSIL 206
            + L  M ++G  PN F YN L+ G C   R   A EL   M      G   +V SY+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+ K  + + A S Y EML +GI P VVTYN++   L +   +++A ++ + M ++GV
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y + + G C +G   EA+   + +R    E D+ +YS L+D LCK+GR   A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F S+ +  L  ++ TY  ++      G + + H L   M   G+ PD   F+ L+    
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 387 RNNETSKVVELLHRMDER 404
              +  + + +  +M ++
Sbjct: 383 NQGKVDQAMLVFSKMRQQ 400



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 6/285 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +PNVITY+TLING C  G    A+ L   M++      V  KP+ 
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   ++A Q+ + +  + ++  A  +N ++D     GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LFV+  S G   N ++Y ++         +E    L+  M   G        N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 228/435 (52%), Gaps = 31/435 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------EFGV 54
           MEA  +F  +   G +P + TY TL+ G    G  +    L + M+  NG       F +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSI 376

Query: 55  -VC-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
            +C                        P+AV Y  +I  LCK G V+ A     QM D+ 
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           ++P  + YNS+I G C  N    A+ L +EM+D+G+  N + F+ I+D  CK G++ E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L ELM++IGV+PN   YNTL++G+CL G+++ A +L   M S+G K N  +YS LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   A +L+  +   G   + 
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   + GLCKN    +AL++F+ L ++  +L+ R+++ +ID L K GR   A +LF +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                L+ +  TY +M   +   G +++   LFL ME  G   D    N ++   ++  E
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 391 TSKVVELLHRMDERN 405
            ++    L  +DE++
Sbjct: 737 ITRAGTYLSMIDEKH 751



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 228/428 (53%), Gaps = 41/428 (9%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T+ING  + G +  A + + EM+    + G++  PD V Y +II  L
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYNSIIAAL 241

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA E+L  M    + PD +TYNS++ G+C +    EA     +M   GV+P+V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301

Query: 131 VTFSVIMDELCKNGKMEEASQ-----------------------------------LLEL 155
           VT+S++MD LCKNG+  EA +                                   LL+L
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G+ P+ +V++ L+  +   G+V++A  +F  M   G   N  +Y  +I   CK+  
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E A+  + +M+ +G+ P  + YN+L  GL   ++ ERA +L  EM   G+  +T  + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID  CK G ++E+ +LF  +  +  + ++ +Y+ LI+G C +G++  A +L   +    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L  + VTY+ +I+  C   +M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 396 ELLHRMDE 403
           EL  R+ E
Sbjct: 602 ELYVRITE 609



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 201/393 (51%), Gaps = 9/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TYS L++ LC+ G  + A  +F+ M           KP+  
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+PD   ++ +I  +      ++A  +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN VT+  ++  LCK+G++E+A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP V+TYNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  +T  Y T I+G CK   + +AL LF+ +     
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 362 LFLDMEAKGVAPDCVAFNTL---MLGCIRNNET 391
           +F ++    +  +   FN +   +L   RN+E 
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 51/444 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   P++ TY  LI   CR G   +       +I          + D
Sbjct: 68  AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKG------FRVD 121

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M +    P+V +YN +++G C  N S EA  L 
Sbjct: 122 AIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELL 181

Query: 118 -------------------------------------FIEMMDQGVQPNVVTFSVIMDEL 140
                                                + EM+D+G+ P+VVT++ I+  L
Sbjct: 182 HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAAL 241

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK   M++A ++L  M++ GV P+   YN+++ G+C +G+   A      M S G + +V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +YS+L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D 
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M R+G+  D + +   I    K G + +A+ +F  +R      +  +Y  +I  LCKSGR
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++ A   F  +    L    + YN +IH LC   K ++A +L L+M  +G+  + + FN+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 381 LMLGCIRNN---ETSKVVELLHRM 401
           ++    +     E+ K+ EL+ R+
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRI 505



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 4/318 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD+ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSIL 206
            + L  M ++G  PN F YN L+ G C   R   A EL   M      G   +V SY+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+ K  + + A S Y EML +GI P VVTYN++   L +   +++A ++ + M ++GV
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y + + G C +G   EA+   + +R    E D+ +YS L+D LCK+GR   A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F S+ +  L  ++ TY  ++      G + + H L   M   G+ PD   F+ L+    
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 387 RNNETSKVVELLHRMDER 404
           +  +  + + +  +M ++
Sbjct: 383 KQGKVDQAMLVFSKMRQQ 400



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 6/285 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +PNVITY+TLING C  G    A+ L   M++      V  KP+ 
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   ++A Q+ + +  + ++  A  +N ++D     GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LFV+  S G   N ++Y ++         +E    L+  M   G        N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 213/384 (55%), Gaps = 6/384 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P   TY  LI+GLC+      A  L +EMI  +      C PDA +Y  +I GLCK G
Sbjct: 88  CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD------CHPDAAVYNCLIAGLCKMG 141

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D A+ +L  M +++  PDV+TY S+I G C  N  +EA++L  +M + G+ P+ V ++
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +++ LCK  ++EE S+LLE M++ G  P+ F YNT++   C +G+   A ++   M   
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            C  +V +Y+ L++G+CK  +++ A  L  +M+ +   PTV+TY TL  G     ++  A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           +++ ++M + G++ D   Y   +DGLCK G + EA EL   +    C  D+ +YS L++G
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G++  A  L   +       ++VT+N MI   C  GK+D+ H +   M+     PD
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 375 CVAFNTLMLGCIRNNETSKVVELL 398
            V ++TL+ G  + N       +L
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAIL 465



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 219/403 (54%), Gaps = 12/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K+    C P+V+TY++L++G C+      A  L E+M+      G  C P  +
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV------GRRCAPTVI 303

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G  +   +  A  ++  M    I+PD+VTYN ++ G C A    EA  L   M
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++   P+VVT+S++++ LCK GK+++A  LLE+M++ G +PN   +NT++DGFC  G+V
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKV 423

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ++   M+ + C  +V +YS LI+GYCK   ++ A ++       GI P   +Y+++
Sbjct: 424 DEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSM 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +VE A ++ D M + G    +  Y   I GLC      EAL++ + +    C
Sbjct: 478 LEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ +YS LI+GLCK+ R++ A  +   +     + DV TY  +I   C   KMD A+ 
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQ 597

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  M   G  PD +A+N L+ G  ++    K +E++  M E+
Sbjct: 598 CFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 201/381 (52%), Gaps = 12/381 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +    C P VITY+TLI G  R      A  + E+M      F     PD V
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM------FKAGISPDLV 338

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLCK G +++A ELL  M +K+  PDVVTY+ ++ G C     ++A+ L   M
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G QPN+VTF+ ++D  CK GK++E  ++LELM ++   P+   Y+TL+DG+C   + 
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC---KA 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NR ++ F  +   G   +  SYS ++ G C   ++E A  +   M  +G  PT   Y  +
Sbjct: 456 NRMQDAFAIL---GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALI 512

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ + + A K+   M   G   + + Y   I+GLCK   + +A+ +   +    C
Sbjct: 513 IGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGC 572

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LIDG CK  ++  A++ F ++       D + YNI+I   C  G ++KA +
Sbjct: 573 VPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIE 632

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           +   M  KG  PD   + +LM
Sbjct: 633 VMQLMLEKGCNPDAATYFSLM 653



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 215/438 (49%), Gaps = 47/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++    C P+   Y+ LI GLC+ G    A N+ + M+  +      C PD +
Sbjct: 110 EAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS------CVPDVI 163

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G C+   +D+A++L+ +MK+  + PD V YN+++ G C  N   E  +L  EM
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+  +++ ++  LC++GK EEA ++LE MI+    P+   YN+LMDGFC   ++
Sbjct: 224 VEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKM 283

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L   M    C   V +Y+ LI G+ +   +  A  +  +M   GI P +VTYN L
Sbjct: 284 DEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCL 343

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR--------------------------- 274
             GL +  ++E A +L + M     A D   Y                            
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 275 --------TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                   T IDG CK G + E  ++   ++ + C  D+ +YS LIDG CK+ R++ A+ 
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +    P      D  +Y+ M+  LC+ GK+++A ++   M  +G  P    +  ++ G  
Sbjct: 464 ILGISP------DKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517

Query: 387 RNNETSKVVELLHRMDER 404
                 + +++L  M ER
Sbjct: 518 DVERGDEALKMLQVMSER 535



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 179/314 (57%), Gaps = 12/314 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +    C P+V+TYS L+NGLC+ G    A  L E M+    E G  C+P+ V
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML----ERG--CQPNLV 408

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG CK G VD+  ++L  MK+ +  PDVVTY+++I G+C AN   +A  +    
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL--- 465

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  ++S +++ LC  GK+EEA ++++LM + G  P +  Y  ++ G C   R 
Sbjct: 466 ---GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M   GC+ N+++YSILING CK K +E A+++   ML KG  P V TY +L
Sbjct: 523 DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSL 582

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I++++ A++ F  M+  G   D  AY   I G C++G + +A+E+ + +    C
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGC 642

Query: 302 ELDIRSYSCLIDGL 315
             D  +Y  L+  L
Sbjct: 643 NPDAATYFSLMRSL 656



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 201/405 (49%), Gaps = 10/405 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E  + F +  +   +P+  TY  LI G  R G++ + L +  EM+           PD 
Sbjct: 6   LEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRF------SPDV 59

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + + TI+   C+ G +D+A   L   + K   +P   TY  +I G C     +EA +L  
Sbjct: 60  ITHNTILKAYCQIGDLDRA---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLD 116

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +   P+   ++ ++  LCK GK++ A  +L++M++    P+   Y +L+ G C T 
Sbjct: 117 EMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTN 176

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++ A++L   M+  G   +  +Y+ L+NG CK  ++E    L  EM+  G +P   +YN
Sbjct: 177 ALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYN 236

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T+   L E  + E A K+ ++M       D   Y + +DG CK   + EA  L   +   
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C   + +Y+ LI G  ++ RL  A+ +   + +  +  D+VTYN ++  LC  GK+++A
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           H+L   M  K  APD V ++ L+ G  +  +      LL  M ER
Sbjct: 357 HELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 178/354 (50%), Gaps = 2/354 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F    KP    Y  +I G  + G      E+  +M  +  +PDV+T+N++++ +C   D 
Sbjct: 16  FSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDL 75

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A   F   M     P   T+ +++  LC+  +++EA QLL+ MIQ    P+A VYN L
Sbjct: 76  DRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL 133

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G C  G+++ A+ +   M    C  +V +Y+ LI G C+   ++ A  L  +M   G+
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  V YN L  GL + +Q+E   KL +EM   G   DT++Y T +  LC++G   EA +
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   +   KC  D+ +Y+ L+DG CK  ++  A  L   +        V+TY  +I    
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFS 313

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              ++  A+ +  DM   G++PD V +N L+ G  +  +  +  ELL  M E++
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 221/402 (54%), Gaps = 10/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  ++  G  PN ITY+ L++GLC  G    A  L+E MI           PD V
Sbjct: 68  DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------YSPDVV 121

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G CK G +D+A ++      +   PDVVTYN++I GFC A+  +EA+R+   M
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT-GR 180
           + + + P+VVT++ +++ LCKNG+++EA  L+   +  G  PN   Y+TL+ G C    R
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRR 238

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++L   M   GCK ++ SY+ LI+G  + + +  AL L+  +L +G +P V TYN 
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +V  AF+LF  + +HG+  D   Y  FIDGLCK G + +AL + + +    
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D+ S++ +I+GLCK  R+  A  L   +       + +++N +I   C  GK  KA 
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             F +M  +GV P  V +N L+ G  +  +  ++ E +   D
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/389 (34%), Positives = 214/389 (55%), Gaps = 10/389 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ T++  I+GLCR      A  +F+ M   +G +     P+ + Y  ++ GLC  G + 
Sbjct: 49  DISTFNIYISGLCRASRIGDAQTVFDGM-RKHGFW-----PNRITYNALLSGLCNGGRMS 102

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A+ L  +M     +PDVVTYN+++ GFC     +EA ++F   + +G  P+VVT++ ++
Sbjct: 103 DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALI 162

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           +  CK  K++EA ++L+ M+   + P+   YN+L++G C  GRV+ A+ L V     G  
Sbjct: 163 NGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFS 219

Query: 198 HNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
            NV +YS LI+G C+  + +E A  L  +M+  G KP +V+YN L  GL     V  A K
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  + R G   +   Y   IDGL K   + EA ELF  L     E D  +Y+  IDGLC
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+GR++ A  +   +     + DVV++N +I+ LC + ++D+A  L   MEAKG +P+ +
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 399

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +FNTL+ G  R  +  K +     M +R 
Sbjct: 400 SFNTLICGQCRAGKWKKAMTTFKEMLKRG 428



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/391 (36%), Positives = 211/391 (53%), Gaps = 12/391 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTI-VALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLC 71
           G  PNVITYSTLI+GLCR    +  A  L E+M+ NG       CKPD V Y  +I GL 
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG-------CKPDIVSYNALIHGLA 269

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +E  V +A +L   +  +   P+V TYN +I G    +  NEA  LF  ++  G++P+ +
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++V +D LCK G++E+A  +L+ M + G  P+   +N +++G C   RV+ A+ L   M
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ- 250
           E+ GC  N  S++ LI G C+  + + A++ + EML +G+KPTVVTYN L  GL +  Q 
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 251 --VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             ++ A  LFD M   G   D   Y   IDGL K G + +A  L   +    C  ++ +Y
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI GLC   ++  A ELF ++     + D +TY  +I ALC    +DKA  LF     
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            GV P    + +L+ G        + ++LL 
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 232/443 (52%), Gaps = 48/443 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL+ ++   G  P+V+TY+TL++G C+ G    AL +F+    G  + G V  PD V
Sbjct: 103 DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFD----GAVKRGFV--PDVV 156

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK   +D+A+ +L +M  +++ PDVVTYNS++ G C     +EA+ L +  
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV-- 214

Query: 122 MDQGVQPNVVTFSVIMDELCKN-GKMEEASQLLELMIQIGVRP-----NAFV-------- 167
            D+G  PNV+T+S ++  LC+   ++E A QLLE M+  G +P     NA +        
Sbjct: 215 -DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273

Query: 168 ----------------------YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                 YN L+DG     RVN A ELF  +   G + +  +Y++
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            I+G CK   +E AL +  +M  KG  P VV++N +  GL +  +V+ A  L   M+  G
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS---GRLK 322
            + +  ++ T I G C+ G   +A+  F+ +     +  + +Y+ L+DGLCK+   GR+K
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  LF ++     + DVVTY+ +I  L   GK+D A  L   MEAKG  P+   +N+L+
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513

Query: 383 LGCIRNNETSKVVELLHRMDERN 405
            G    ++  + +EL   M E+ 
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKG 536



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 175/296 (59%), Gaps = 9/296 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+ L   G EP+ ITY+  I+GLC+ G    AL + ++M     E G  C PD V
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM----DEKG--CVPDVV 364

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+GLCKE  VD+A+ LL  M+ K  +P+ +++N++I G C A    +A   F EM
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424

Query: 122 MDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           + +GV+P VVT+++++D LCK    G+++EA  L + MI+ G  P+   Y+ L+DG    
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+++ A+ L  +ME+ GC  NV++Y+ LI+G C   +++ AL L+  M+ KG  P  +TY
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            T+   L +   V++A  LFD     GV   +  Y + IDGLC    + EAL+L +
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 34/381 (8%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PDA     ++  L K G ++KA   + Q+  K +  D+ T+N  I G C A+   +A+ +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M   G  PN +T++ ++  LC  G+M +A  L E MI+ G  P+   YNTL+ GFC 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+++ A ++F      G   +V +Y+ LING+CK  +++ A  +   M+S+ + P VVT
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 238 YNTLFIGL---------------------------------FEIHQVERAFKLFDEMQRH 264
           YN+L  GL                                  E+ ++E A +L ++M  +
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D  +Y   I GL +   + EAL+LF ++     E ++ +Y+ LIDGL K  R+  A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +ELF  L +  L  D +TY + I  LC  G+++ A  +  DM+ KG  PD V+ N ++ G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372

Query: 385 CIRNNETSKVVELLHRMDERN 405
             +     +   LL  M+ + 
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKG 393


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/398 (36%), Positives = 222/398 (55%), Gaps = 10/398 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  K+   G  PN IT++TL+ GLC  G     L+  ++++          + + V Y 
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVV------AQAFQTNQVSYG 119

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+++GLCK G    A +LL  ++D++  P+VV Y+++I G C     NEA  L+ EM  +
Sbjct: 120 TLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNV+T++ ++   C  G++  A  LL  MI   + P+ + ++ L+D  C  G+   A
Sbjct: 180 EIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NA 237

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K++F +M  MG   NV+SY+I+ING CK K ++ A++L  EML K + P  VTYN+L  G
Sbjct: 238 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  ++  A  L +EM   G  AD   Y + +D LCKN  + +A  LF  ++    +  
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 305 IRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           + +Y+ LIDGLCK GRLK A ELF H L +G  I DV TY +MI  LC +G  D+A  + 
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI-DVWTYTVMISGLCKEGMFDEALAIK 416

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ME  G  P+ V F  ++      +E  K  +LLH M
Sbjct: 417 SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 8/363 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+ A   + N ++Y TL+NGLC+TG T  A+ L   MI          +P+ V+Y+ IID
Sbjct: 105 KVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLR-MIEDRST-----RPNVVMYSAIID 158

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+  V++A +L  +M  + I P+V+TYN++I  FC A     A  L  EM+ + + P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINP 218

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V TFS+++D LCK GK   A Q+   M+Q+GV PN + YN +++G C   RV+ A  L 
Sbjct: 219 DVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 276

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M       +  +Y+ LI+G CK+  I  AL+L +EM  +G    VVTY +L   L + 
Sbjct: 277 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 336

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             +++A  LF +M+  G+    + Y   IDGLCK G +  A ELF+ L +  C +D+ +Y
Sbjct: 337 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 396

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +I GLCK G    A  +   +     I + VT+ I+I +L    + DKA  L  +M A
Sbjct: 397 TVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA 456

Query: 369 KGV 371
           KG+
Sbjct: 457 KGL 459



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 167/342 (48%), Gaps = 2/342 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  I+  L K  +      L  QM  K I  ++VT + +I  FC+      +  L  +++
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN +T++ +M  LC  G++++     + ++    + N   Y TL++G C TG   
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +E    + NV  YS +I+G CK+K +  A  LYSEM ++ I P V+TYNTL 
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                  Q+  AF L  EM    +  D + +   ID LCK G    A ++F  +  +   
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVN 250

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ SY+ +I+GLCK  R+  A  L   +    ++ D VTYN +I  LC  G++  A +L
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M  +G   D V + +L+    +N    K   L  +M ER
Sbjct: 311 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 31/302 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV------- 54
           EA  L++++ A    PNVITY+TLI   C  G  + A +L  EMI  N    V       
Sbjct: 168 EAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILI 227

Query: 55  --VCK------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
             +CK                  P+   Y  +I+GLCK   VD+A  LL +M  KN+ PD
Sbjct: 228 DALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 287

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
            VTYNS+I G C +     A  L  EM  +G   +VVT++ ++D LCKN  +++A+ L  
Sbjct: 288 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 347

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M + G++P  + Y  L+DG C  GR+  A+ELF  +   GC  +V++Y+++I+G CK  
Sbjct: 348 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 407

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             + AL++ S+M   G  P  VT+  +   LFE  + ++A KL  EM    +A     +R
Sbjct: 408 MFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM----IAKGLLGFR 463

Query: 275 TF 276
            F
Sbjct: 464 NF 465



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 101/206 (49%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +  ++ ++    K K     +SL  +M  KGI+  +VT + L      + Q+  +F L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           ++ + G   +T  + T + GLC  G + + L     +     + +  SY  L++GLCK+G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
             + A +L   +       +VV Y+ +I  LC D  +++A+DL+ +M+A+ + P+ + +N
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           TL+       +      LLH M  +N
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKN 215


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/385 (34%), Positives = 213/385 (55%), Gaps = 9/385 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY+ LI+GLC+   T  A  +  EM++     GV   PD V + +I+DGLCK G  
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVD----RGVT--PDTVTFNSIMDGLCKAGKF 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  LL  M ++N  P   TYN++I G C   + + AK L  E +  G  P+VVT+S++
Sbjct: 62  ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
            D LCK G+++EA +L++ M   G  PN   YNTL+DG C   +  +A EL  ++ S G 
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+I+++G CK   ++ AL +   ML +G  P+V+TY  L  GL    +V+ A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F EM      AD  AY + ++G CK+    EA ++   +R       I  Y+ L+DG C
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYC 298

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL     +F  +     + ++ TYNI++  LC  GK+D+A      M + G  PD V
Sbjct: 299 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 358

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
           ++N ++ G  + ++  +  ++L +M
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQM 383



 Score =  230 bits (587), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 220/437 (50%), Gaps = 48/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ +  ++   G  P+ +T++++++GLC+ G    A +L   M   N      C+P   
Sbjct: 28  KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN------CRPSCC 81

Query: 62  IYTTIIDGLCKEGFVDKAK-----------------------------------ELLLQM 86
            Y T+I GLCK+  VD+AK                                   EL+ +M
Sbjct: 82  TYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 141

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                 P++VTYN++I G C A+ + +A  L   ++  G  P+VVT+++I+D LCK G++
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +++E M++ G  P+   Y  LM+G C TGRV+ A  +F  M S  C  +  +Y  L
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +NGYCK+   + A     + +  GI+  P +  YN L  G  +  +++    +F++M   
Sbjct: 262 VNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   +   Y   +DGLCK+G + EA     ++    C  D+ SY+ +IDGL K+ + K A
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ++   + +  +  D VTYN ++   C + + D A  +  +M   GV PD V +NTL+ G
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436

Query: 385 CIRNNETSKVVELLHRM 401
             + N      EL+H M
Sbjct: 437 LSQTNRLGDAYELMHEM 453



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 209/393 (53%), Gaps = 14/393 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+VITY+ L+ GLCRTG    A ++F+EM++ +      C  DA+ Y ++++G CK 
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD------CTADALAYVSLVNGYCKS 268

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
               +A++++  ++     P +  YN+++ G+C     +E   +F +M  +G  PN+ T+
Sbjct: 269 SRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 325

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++MD LCK+GK++EA   LE M   G  P+   YN ++DG     +   A+++   M  
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 385

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ L+  +CK +  + A+ +   M+  G+ P  VTYNTL  GL + +++  
Sbjct: 386 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 445

Query: 254 AFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A++L  EM R+G V +    Y T ID LCK G + +AL L   +     E +  +Y+  I
Sbjct: 446 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA-KGV 371
           D LCK GRL  A  L   +     + D V+Y  +I  LC   ++D+A  L  +M A KG+
Sbjct: 506 DRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 562

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                 FN L+    +     + + LL  M +R
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDEALTLLELMVQR 595



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 176/348 (50%), Gaps = 32/348 (9%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M ++ + PDV TYN +I G C A+ +++A  +  EM+D+GV P+ VTF+ IMD LCK GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            E A  LL +M +   RP+   YNTL+ G C    V+RAK L     S G   +V +YSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G CK   I+ A  L  EM   G  P +VTYNTL  GL +  + E+A++L + +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   Y   +DGLCK G + +AL++   +    C   + +Y+ L++GLC++GR+  A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 326 ELFHSLPRGVLIADVVT--------------------------------YNIMIHALCAD 353
            +F  +      AD +                                 YN ++   C +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G++D+  ++F DM  +G  P+   +N +M G  ++ +  +    L  M
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 348



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 199/402 (49%), Gaps = 11/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +F  +   GC PN+ TY+ +++GLC+ G    A    E M +        C PD V
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG------CVPDVV 358

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IIDGL K     +A+++L QM    I PD VTYN+++  FC     ++A  +   M
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 418

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA-FVYNTLMDGFCLTGR 180
           +  GV P+ VT++ ++  L +  ++ +A +L+  M++ G   +A   YNT++D  C  G 
Sbjct: 419 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 478

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M   G + N  +Y+I I+  CK   ++ A SL SEM +   +   V+Y T
Sbjct: 479 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTT 535

Query: 241 LFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           + IGL +  Q++RA KL  EM    G+   +  +   ID   K   + EAL L   +   
Sbjct: 536 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQR 595

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C   + +Y+ +I  LCK  ++  AWELF  +    ++A  V+Y ++I+ LC  G+  +A
Sbjct: 596 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 655

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +  +M +     D +    L L         +  ELL RM
Sbjct: 656 LQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 180/370 (48%), Gaps = 11/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + + GC P+V++Y+ +I+GL +      A  + ++MI      G+   PDAV
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA----GI--PPDAV 393

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++   CKE   D A  +L  M    ++PD VTYN++I G    N   +A  L  EM
Sbjct: 394 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  G V     T++ I+D LCK G +++A  L++ M   GV  N   YN  +D  C  GR
Sbjct: 454 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 513

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYN 239
           ++ A  L   M+++    +  SY+ +I G CK ++++ A  L  EM++ KG+  T  T+N
Sbjct: 514 LDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 570

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +  +++ A  L + M + G +     Y   I  LCK   + +A ELF  + + 
Sbjct: 571 LLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 630

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                  SY+ LI GLC  GR K A ++   +       D +    +  AL   G+ ++A
Sbjct: 631 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690

Query: 360 HDLFLDMEAK 369
            +L   M  K
Sbjct: 691 AELLRRMTTK 700



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 104/206 (50%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +VF+Y+ILI+G CK  + + A  +  EM+ +G+ P  VT+N++  GL +  + ERA  L 
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M           Y T I GLCK   +  A  L           D+ +YS L DGLCK 
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR+  A+EL   +       ++VTYN +I  LC   K +KA++L   + + G  PD V +
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
             ++ G  +     K ++++  M +R
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKR 214



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%)

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DV TYNI+I  LC   K DKA ++  +M  +GV PD V FN++M G  +  +  +   LL
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 399 HRMDERN 405
             M ERN
Sbjct: 69  AVMAERN 75


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/406 (34%), Positives = 224/406 (55%), Gaps = 11/406 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A      L  F   P+V  ++ LI+GL + G+   A+ LFE M +         KP+ 
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR------VKPEI 132

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           V Y T+I GLCK G ++KA+ELL +M  K     PD+VTYN++I  F  A+   EA    
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFR 192

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+ P+V+T ++++  +CK+G +EEA ++L+ M   G  P+   YN+++   C+ 
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+V  A E+   +++M C  ++ +++ L++G+CK   +  AL +  EM  + I P V+TY
Sbjct: 253 GKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L  GL  + QV+ AF L +E+ R G   D  AY + +DGLCK+G I EA +L + + +
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C   +  YS L+ G C++G +  A E+   +    ++  + TYNI++  L  DG + K
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  L  D+ A+G  PD V +NTL+ G  + N   +  +L   M  R
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASR 475



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 216/389 (55%), Gaps = 11/389 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +K  G  P+VITY+++I+ LC  G  + A  + + M          C PD V
Sbjct: 222 EALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---------SCSPDLV 272

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++DG CK G + +A E+L +M  +NI PDV+TY  ++ G C       A  L  E+
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+V+ ++ ++D LCK+G++EEA +L++ M   G R    +Y++L+ G+C  G V
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+E+   M S+     +F+Y+I++ G  K+  I  A+SL S+++++G  P VVTYNTL
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + ++V  A  L DEM   G   +     + + GLC+ G + +A  L   +   + 
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAH 360
             ++  Y+ LIDGLCKS R+  A  +  ++ RG  +A D   Y  +I ++   G++ +A 
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAM-RGQGVALDDFAYRKLIVSMSHGGRVAEAM 571

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            ++ +M A+G  PD     TL    + N+
Sbjct: 572 AMYDEMVARGFLPDGSTSKTLEEAAMSNS 600



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 212/403 (52%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A   K+KA G  P+V+T + L++G+C+ G    AL    E+++G    G V  PD +
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL----EILDGMKLAGPV--PDVI 240

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +II  LC  G V +A E+L  M   + +PD+VT+N+++ GFC A     A  +  EM
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V+T++++++ LC+ G+++ A  LLE +++ G  P+   Y +L+DG C +G +
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   GC+  V  YS L++GYC+   +  A  + +EM+S  + P + TYN +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   + +A  L  ++   G   D   Y T IDGLCK   + EA +L   +    C
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +   ++ GLC+ GR+  AW L   + R     +VV Y  +I  LC   +MD A  
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   M  +GVA D  A+  L++        ++ + +   M  R
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVAR 580



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 213/408 (52%), Gaps = 11/408 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +++   +P ++TY+T+I+GLC++G+   A  L EEMI   G+      PD V
Sbjct: 115 QAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGK----SAPDIV 170

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+   +   + +A     +MK   INPDV+T N ++ G C   D  EA  +   M
Sbjct: 171 TYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V+T++ I+  LC  GK+ EA+++L+ M      P+   +NTL+DGFC  G +
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 287

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA E+   M       +V +Y+IL+NG C+  +++ A  L  E++ +G  P V+ Y +L
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A KL  EM   G       Y + + G C+ G + +A E+   +  +  
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ ++ GL K G +  A  L   L     + DVVTYN +I  LC   ++ +A D
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIR----NNETSKVVELLHRMDERN 405
           L  +M ++G  P+ V   +++ G  R    ++  S VVE+  +    N
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 208/390 (53%), Gaps = 11/390 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +V +Y+ L++ L ++GH      +++++++        C P+ V +  +I G CK 
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG------CSPNLVTFKILIRGNCKA 75

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A E L  + + ++ PDV  +N +I G     + ++A +LF  M    V+P +VT+
Sbjct: 76  GQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTY 135

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           + ++  LCK+G +E+A +LLE MI+ G +  P+   YNTL++ F    R+  A      M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ++ G   +V + +IL++G CK+ ++E AL +   M   G  P V+TYN++   L    +V
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKV 255

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A ++   M     + D   + T +DG CK G +  ALE+   +       D+ +Y+ L
Sbjct: 256 VEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ++GLC+ G++++A+ L   + R   I DV+ Y  ++  LC  G++++AH L  +M  +G 
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               V +++L+ G  R     K  E+L  M
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEM 402



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 146/284 (51%), Gaps = 5/284 (1%)

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G + +V +++ ++D L K+G      ++ + ++  G  PN   +  L+ G C  G+  R
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A E   +++      +V+ +++LI+G  K+   + A+ L+  M S  +KP +VTYNT+  
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 244 GLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
           GL +   +E+A +L +EM R G   A D   Y T I+   +   I EA      ++    
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ + + L+ G+CK G ++ A E+   +     + DV+TYN +IHALC  GK+ +A +
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   M     +PD V FNTL+ G  +     + +E+L  M   N
Sbjct: 261 ILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCREN 301



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E  G KH+V SY+ L++   K+        +Y ++L  G  P +VT+  L  G  +  Q 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            RA +    +    VA D + +   I GL K+G   +A++LF  +   + + +I +Y+ +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 312 IDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           I GLCKSG L+ A EL   + R  G    D+VTYN +I+A     ++ +A      M+A 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G+ PD +  N L+ G  ++ +  + +E+L  M
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGM 230



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 254 AFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A + FD   ++ G   D  +Y   +D L K+G+     ++++ L    C  ++ ++  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G CK+G+   A E   +L    +  DV  +N++IH L  DG  D+A  LF +ME+  V 
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           P+ V +NT++ G  ++    K  ELL  M
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEM 158



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ + GC PN +T  +++ GLCR G    A +L  EM            P+ V
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH------APNVV 517

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++IDGLCK   +D A  +L  M+ + +  D   Y  +I    +     EA  ++ EM
Sbjct: 518 VYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEM 577

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME 147
           + +G  P+  T   + +    N   E
Sbjct: 578 VARGFLPDGSTSKTLEEAAMSNSVFE 603


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/401 (35%), Positives = 224/401 (55%), Gaps = 10/401 (2%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A AL  K+   G +P+++T  +L+NG C+      A++L + M     E G+  +P+ VI
Sbjct: 669  ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----AELGL--EPNVVI 722

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            Y T+I+GLCK   ++ A E+   M+ K I  D VTYN++I G C +    +A RL  +M+
Sbjct: 723  YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782

Query: 123  DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             + + PNV+ F+ ++D   K G + EA  L + MI+  V PN   YN+L++GFC+ GR+ 
Sbjct: 783  KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             AK +F  M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+     TYNTL 
Sbjct: 843  DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             G  +  ++  A K+F+ M   GV  D   Y   +D LC NG I +AL +   L+  + +
Sbjct: 903  HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +DI +Y+ +I G+C++ ++K AW LF SL R  +  D + Y  MI  LC +G   +A  L
Sbjct: 963  VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022

Query: 363  FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
               M+  G  P    ++  +    R++ TS   EL+  + E
Sbjct: 1023 CTRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAVHE 1059



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 211/370 (57%), Gaps = 7/370 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G +P+++T+ +L++G C       A +L   M+    E      P+ V+
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE------PNVVV 172

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           Y T+ID LCK G V+ A ELL +M+ K  +  D+VTYN+++ G CY+ +  +A R+  +M
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM 232

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V TF+ ++D   K G ++EA +L + M+Q  + PN   YN+L++G C+ GR+
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK+ F  M S GC  NV +Y+ LING+CK++ +E  + L+  M  +G+     TYNTL
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++  A  +F  M   GV  D   +   + GLC NG I  A+  F  +R  + 
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L I +Y+ +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472

Query: 362 LFLDMEAKGV 371
           LF  M+  G+
Sbjct: 473 LFRRMKEDGI 482



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 203/396 (51%), Gaps = 7/396 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++ FG   ++ +++ LI+  CR     +AL++  +M+    + G    P  V + +++ 
Sbjct: 90  QMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM----KLGY--DPSIVTFGSLLH 143

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQ 127
           G C    +  A  L+  M      P+VV YN++I   C   D N A  L  EM  +G + 
Sbjct: 144 GFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLA 203

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
            ++VT++ ++  LC +G+  +A+++L  M +  + P+ F +  L+D F   G ++ A+EL
Sbjct: 204 ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQEL 263

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M       N  +Y+ LING C +  +  A   +  M SKG  P VVTYNTL  G  +
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             +VE   KLF  M R G+  DT+ Y T I G C+ G +  A ++F  +       DI +
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           +  L+ GLC +G +  A   F+ +  G     +V YNIMIH LC   K+++A +LF  + 
Sbjct: 384 HCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLP 443

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +GV PD   +  ++LG  +N    +  EL  RM E
Sbjct: 444 VEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA +L   +   G EPNV+ Y+T+INGLC+      AL +F     G  + G+V   DAV
Sbjct: 703  EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFY----GMEKKGIV--ADAV 756

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y T+I GLC  G    A  LL  M  + I+P+V+ + ++I  F    +  EAK L+ EM
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + + V PN++T++ +++  C  G++ +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ P +VTYN L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               L    ++E+A  + +++Q++ +  D   Y   I G+C+N  + EA  LFR+L     
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 302  ELDIRSYSCLIDGLCKSG 319
            +LD  +Y  +I GLC++G
Sbjct: 997  KLDAIAYITMISGLCRNG 1014



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 8/345 (2%)

Query: 52  FGVVCK-------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
           FG+ C+       P  V +T ++  + K    D    L  +M++  I+ D+ ++  +I  
Sbjct: 600 FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           FC  +  + A  L  +MM  G QP++VT   +++  C+  + +EA  L++ M ++G+ PN
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YNT+++G C    +N A E+F  ME  G   +  +Y+ LI+G C +     A  L  
Sbjct: 720 VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLR 779

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+ + I P V+ +  L     +   +  A  L+ EM R  V  +   Y + I+G C  G
Sbjct: 780 DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + +A  +F  +    C  D+ +Y+ LI G CKS R++   +LF  +    L+ D  TYN
Sbjct: 840 RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +IH  C  GK++ A  +F  M   GV PD V +N ++L C+ NN
Sbjct: 900 TLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN-ILLDCLCNN 943



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 203/461 (44%), Gaps = 63/461 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----------GE 51
           EA  LF +L   G +P+  TY+ +I GLC+ G    A  LF  M              GE
Sbjct: 434 EAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGE 493

Query: 52  FG----------VVCK----------------PDAVIYTTIIDGLCK-------EGFVDK 78
            G          ++C                  D  ++++++ GL         +GFV +
Sbjct: 494 HGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV-GLIPIASSSSVKGFVRR 552

Query: 79  AKELLLQMKDKNINPD---------------VVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
              LL    ++  NP+                  Y   +R   +    ++A  LF EM+ 
Sbjct: 553 HLLLL----ERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQ 608

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
               P++V F+ ++  + K  K +    L   M  +G+  + + +  L+  FC   R + 
Sbjct: 609 SRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSL 668

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M  +G + ++ +   L+NG+C+    + A+SL   M   G++P VV YNT+  
Sbjct: 669 ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL +   +  A ++F  M++ G+ AD   Y T I GLC +G   +A  L R +   K + 
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDP 788

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++  ++ LID   K G L  A  L+  + R  +  +++TYN +I+  C  G++  A  +F
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M +KG  PD V +NTL+ G  ++      ++L   M  +
Sbjct: 849 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 151/299 (50%), Gaps = 1/299 (0%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF ++    +A  LF+EM+     P+VV F+ ++  +    + E      + M   G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G   ++ ++  L++G+C    I  A SL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCK 282
           + M+  G +P VV YNTL   L +   V  A +L +EM++ G +AAD   Y T + GLC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           +G   +A  + R +   +   D+ +++ LID   K G L  A EL+  + +  +  + VT
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           YN +I+ LC  G++  A   F  M +KG  P+ V +NTL+ G  ++      ++L  RM
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 131/239 (54%), Gaps = 6/239 (2%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L+ ++      PN++TY++LING C  G    A ++F+ M++        C PD 
Sbjct: 807  LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG------CFPDV 860

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V Y T+I G CK   V+   +L  +M  + +  D  TYN++I G+C A   N A+++F  
Sbjct: 861  VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+D GV P++VT+++++D LC NGK+E+A  ++E + +  +  +   YN ++ G C   +
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V  A  LF S+   G K +  +Y  +I+G C+N     A  L + M   G  P+   Y+
Sbjct: 981  VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 188/469 (40%), Gaps = 125/469 (26%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC------ 56
           A  +F+ + + G  P++IT+  L++GLC  G    A+  F +M +G    G+V       
Sbjct: 365 AKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424

Query: 57  -----------------------KPDAVIYTTIIDGLCKEGFVDKAKEL---------LL 84
                                  KPDA  YT +I GLCK G   +A EL         + 
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIIC 484

Query: 85  QMKDKNIN---------------------------------PDVVTYNSVIRGFCYANDS 111
           Q +D ++                                   D   ++S++ G      S
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV-GLIPIASS 543

Query: 112 NEAK---RLFIEMMDQGVQPNVVTFS-----------VIMDELCKNG----KMEEASQLL 153
           +  K   R  + ++++G  P   +FS               E  ++     K ++A  L 
Sbjct: 544 SSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLF 603

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M+Q    P+   +  ++       + +    LF  ME++G  H+++S++ILI+ +C+ 
Sbjct: 604 CEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRC 663

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                AL+L  +M+  G +P++VT  +L                                
Sbjct: 664 SRFSLALALLGKMMKLGFQPSIVTLGSL-------------------------------- 691

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              ++G C+     EA+ L  ++  L  E ++  Y+ +I+GLCK+  L  A E+F+ + +
Sbjct: 692 ---LNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             ++AD VTYN +I  LC  G+   A  L  DM  + + P+ + F  L+
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E AL L+ EM+     P+VV +  L   +  + + E       +M+  G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  AL +   +  L  +  I ++  L+ G C   R+  A+
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG-VAPDCVAFNTLMLG 384
            L  S+ +     +VV YN +I  LC +G ++ A +L  +ME KG +A D V +NTL+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 385 CIRNNETSKVVELLHRMDER 404
              + E  +   +L  M +R
Sbjct: 216 LCYSGEWRQAARILRDMTKR 235


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 222/393 (56%), Gaps = 5/393 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FGC  + ++ + +++G C+ G    ALN  +EM N +G F     PD   + T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G V  A E++  M  +  +PDV TYNSVI G C   +  EA  +  +M+ +   PN VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LCK  ++EEA++L  ++   G+ P+   +N+L+ G CLT     A ELF  M 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S GC+ + F+Y++LI+  C   +++ AL++  +M   G   +V+TYNTL  G  + ++  
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++FDEM+ HGV+ ++  Y T IDGLCK+  + +A +L   + +   + D  +Y+ L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
              C+ G +K A ++  ++       D+VTY  +I  LC  G+++ A  L   ++ KG+ 
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               A+N ++ G  R  +T++ + L   M E+N
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 15/299 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   L + G  P+V T+++LI GLC T +  VA+ LFEEM +        C+PD  
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC +G +D+A  +L QM+       V+TYN++I GFC AN + EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N VT++ ++D LCK+ ++E+A+QL++ MI  G +P+ + YN+L+  FC  G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M S GC+ ++ +Y  LI+G CK   +E A  L   +  KGI  T   YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNG--------YIVEALE 291
             GLF   +   A  LF EM +++    D  +YR    GLC  G        ++VE LE
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 198/434 (45%), Gaps = 45/434 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L +K   F  EP +  Y  ++  L R+G       + E+M +   E G         +  
Sbjct: 72  LASKKPNFSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS------TFLI 123

Query: 66  IIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +I+   +    D+   ++  M D+  + PD   YN ++      N     +    +M   
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+V TF+V++  LC+  ++  A  +LE M   G+ P+   + T+M G+   G ++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE------------------- 225
             +   M   GC  +  S +++++G+CK   +E AL+   E                   
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 226 -----------------MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
                            ML +G  P V TYN++  GL ++ +V+ A ++ D+M     + 
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +T  Y T I  LCK   + EA EL R L       D+ +++ LI GLC +   ++A ELF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +       D  TYN++I +LC+ GK+D+A ++   ME  G A   + +NTL+ G  + 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 389 NETSKVVELLHRMD 402
           N+T +  E+   M+
Sbjct: 484 NKTREAEEIFDEME 497



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 16/306 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  GC  +VITY+TLI+G C+   T  A  +F+EM     E   V + ++V
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-----EVHGVSR-NSV 506

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGLCK   V+ A +L+ QM  +   PD  TYNS++  FC   D  +A  +   M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT+  ++  LCK G++E AS+LL  +   G+      YN ++ G     + 
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYN 239
             A  LF  M E      +  SY I+  G C     I  A+    E+L KG  P   +  
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686

Query: 240 TLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAY-------RTFIDGLCKNGYIVEALE 291
            L  GL  +   E   KL +  MQ+   + +  +        R F D L   G ++++ +
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQ 746

Query: 292 LFRTLR 297
             RT R
Sbjct: 747 PRRTYR 752



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV T+N++I ALC   ++  A  +  DM + G+ PD   F T+M G I   +    + +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246

Query: 398 LHRMDE 403
             +M E
Sbjct: 247 REQMVE 252


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 216/432 (50%), Gaps = 42/432 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K K  G +P V  Y+ L    C+TG    AL +F  + +          PDA+
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----------PDAI 227

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II G C++   D A E L +M ++ + PDV TYN +I G C A+ +++A  +  EM
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV P+ VTF+ IMD LCK GK E A  LL +M +   RP+   YNTL+ G C    V
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 347

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RAK+L     S G   +V +YSIL +G CK   I+ A  L  EM  KG  P +VTYNTL
Sbjct: 348 DRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTL 407

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + E+A++L + +   G   D   Y   +DGLCK G + +AL++   +    C
Sbjct: 408 IDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT------------------- 342
              + +Y+ L++GLC++GR+  A  +F  +      AD +                    
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527

Query: 343 -------------YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
                        YN ++   C +G++D+  ++F DM  +G  P+   +N +M G  ++ 
Sbjct: 528 VVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 587

Query: 390 ETSKVVELLHRM 401
           +  +    L  M
Sbjct: 588 KVDEAFPFLESM 599



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 209/417 (50%), Gaps = 40/417 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +  T +  +  L   G +     +FE M++          PD+  Y  +I  LC+ 
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGY------APDSYTYHLVIKSLCQM 173

Query: 74  GFVDKAKELLLQ-------------------------MKD-----KNI-NPDVVTYNSVI 102
             +DKA  +L +                         +KD     +NI +PD + YN++I
Sbjct: 174 NQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAII 233

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            G C  ND + A     EM ++ V P+V T+++++D LCK  K ++AS++L  M+  GV 
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   +N++MDG C  G+  RA  L   M    C+ +  +Y+ LI+G CK + ++ A  L
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             E +S G  P VVTY+ L  GL +  +++ AF+L  EM   G   +   Y T IDGLCK
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
                +A EL  +L       D+ +Y+ ++DGLCK GRL  A ++   + +      V+T
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG---CIRNNETSKVVE 396
           Y  ++  LC  G++D+AH +F +M +K    D +A+ +L+ G     R  E  KVV+
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 209/393 (53%), Gaps = 14/393 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+VITY+ L+ GLCRTG    A ++F+EM++ +      C  DA+ Y ++++G CK 
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD------CTADALAYVSLVNGYCKS 519

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
               +A++++  ++     P +  YN+++ G+C     +E   +F +M  +G  PN+ T+
Sbjct: 520 SRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 576

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++MD LCK+GK++EA   LE M   G  P+   YN ++DG     +   A+++   M  
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 636

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ L+  +CK +  + A+ +   M+  G+ P  VTYNTL  GL + +++  
Sbjct: 637 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 696

Query: 254 AFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A++L  EM R+G V +    Y T ID LCK G + +AL L   +     E +  +Y+  I
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA-KGV 371
           D LCK GRL  A  L   +     + D V+Y  +I  LC   ++D+A  L  +M A KG+
Sbjct: 757 DRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                 FN L+    +     + + LL  M +R
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 11/369 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +F  +   GC PN+ TY+ +++GLC+ G    A    E M +        C PD V
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG------CVPDVV 609

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IIDGL K     +A+++L QM    I PD VTYN+++  FC     ++A  +   M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA-FVYNTLMDGFCLTGR 180
           +  GV P+ VT++ ++  L +  ++ +A +L+  M++ G   +A   YNT++D  C  G 
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M   G + N  +Y+I I+  CK   ++ A SL SEM +   +   V+Y T
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTT 786

Query: 241 LFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           + IGL +  Q++RA KL  EM    G+   +  +   ID   K   + EAL L   +   
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C   + +Y+ +I  LCK  ++  AWELF  +    ++A  V+Y ++I+ LC  G+  +A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906

Query: 360 HDLFLDMEA 368
             +  +M +
Sbjct: 907 LQVLEEMAS 915



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 4/314 (1%)

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           D+       T N  ++       S+    +F  M+D G  P+  T+ +++  LC+  +++
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A  +L+     G +P   VY  L   FC TGR+  A E+F ++ S     +  +Y+ +I
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAII 233

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G+C+  + +GAL    EM  + + P V TYN L  GL +  + ++A ++  EM   GV 
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            DT  + + +DGLCK G    A  L   +    C     +Y+ LI GLCK   +  A +L
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
                    + DVVTY+I+   LC  G++D+A +L  +M  KG  P+ V +NTL+ G  +
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 388 NNETSKVVELLHRM 401
            ++T K  ELL  +
Sbjct: 414 ASKTEKAYELLESL 427



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 4/335 (1%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G  D+   +  +M D    PD  TY+ VI+  C  N  ++A  +  +   +G +P 
Sbjct: 135 LLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPE 194

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V  ++++    CK G++++A   LE+   I   P+A  YN ++ G C     + A E   
Sbjct: 195 VSVYTILTRAFCKTGRLKDA---LEIFRNIP-SPDAIAYNAIIHGHCRKNDCDGALEFLK 250

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M       +VF+Y+ILI+G CK  + + A  +  EM+ +G+ P  VT+N++  GL +  
Sbjct: 251 EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG 310

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           + ERA  L   M           Y T I GLCK   +  A +L           D+ +YS
Sbjct: 311 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYS 370

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L DGLCK GR+  A+EL   +       ++VTYN +I  LC   K +KA++L   + + 
Sbjct: 371 ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS 430

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +  ++ G  +     K ++++  M +R
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 465



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 40/337 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + + GC P+V++Y+ +I+GL +      A  + ++MI      G+   PDAV
Sbjct: 591 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA----GI--PPDAV 644

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++   CKE   D A  +L  M    ++PD VTYN++I G    N   +A  L  EM
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  G V     T++ I+D LCK G +++A  L++ M   GV  N   YN  +D  C  GR
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764

Query: 181 VNRAKELFVSMESMG------------CKHNVF---------------------SYSILI 207
           ++ A  L   M+++             CK                         ++++LI
Sbjct: 765 LDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLI 824

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           + + K K ++ AL+L   M+ +G  P+V+TYN +   L ++ +V++A++LFDEM   G+ 
Sbjct: 825 DAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV 884

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           A + +Y   I GLC  G   EAL++   +    CE+D
Sbjct: 885 ASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 4/219 (1%)

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            FV     G KH+ F+ +  +    +N   +   +++  ML  G  P   TY+ +   L 
Sbjct: 112 FFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLC 171

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +++Q+++AF + D+ +  G   +   Y       CK G + +ALE+FR +       D  
Sbjct: 172 QMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAI 227

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ +I G C+      A E    +    +  DV TYNI+I  LC   K DKA ++  +M
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +GV PD V FN++M G  +  +  +   LL  M ERN
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%)

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K+ + A+  +     +G K +  T N     L E    +R   +F+ M   G A D++ Y
Sbjct: 104 KDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTY 163

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              I  LC+   I +A  +    ++   + ++  Y+ L    CK+GRLK A E+F ++P 
Sbjct: 164 HLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                D + YN +IH  C     D A +   +M  + VAPD   +N L+ G  + ++T K
Sbjct: 224 ----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 394 VVELLHRMDER 404
             E+LH M +R
Sbjct: 280 ASEMLHEMVDR 290



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 14/116 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   GC P+VITY+ +I  LC+      A  LF+EM       G+V    +V
Sbjct: 835 EALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM----AVRGIVAS--SV 888

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR--------GFCYAN 109
            YT +I GLC +G   +A ++L +M   +   D + +  V          G CY++
Sbjct: 889 SYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPHSQFQTTFGPCYSS 944


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 215/373 (57%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A+    K+   G EP+++T+++L+NG C       A+ LF++++      G+  KP+ V
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL------GMGFKPNVV 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I  LCK   ++ A EL  QM      P+VVTYN+++ G C      +A  L  +M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M + ++PNV+TF+ ++D   K GK+ EA +L  +MIQ+ V P+ F Y +L++G C+ G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++F  ME  GC  N   Y+ LI+G+CK+K +E  + ++ EM  KG+    +TY  L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + + + A ++F++M       D   Y   +DGLC NG + +AL +F  +R  + 
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +++I +Y+ +I G+CK G+++ A++LF SL    +  +V+TY  MI   C  G + +A  
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489

Query: 362 LFLDMEAKGVAPD 374
           LF  M+  G  P+
Sbjct: 490 LFKKMKEDGFLPN 502



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF +++  G  P + T + +++ +C +     A     +M+    E      PD V +T
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE------PDLVTFT 157

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    ++ A  L  Q+      P+VVTY ++IR  C     N A  LF +M   
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PNVVT++ ++  LC+ G+  +A+ LL  M++  + PN   +  L+D F   G++  A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           KEL+  M  M    +VF+Y  LING C    ++ A  ++  M   G  P  V Y TL  G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +VE   K+F EM + GV A+T  Y   I G C  G    A E+F  +   +   D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+Y+ L+DGLC +G+++ A  +F  + +  +  ++VTY I+I  +C  GK++ A DLF 
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + +KG+ P+ + + T++ G  R     +   L  +M E
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+LF  M++          P  + +T ++  + K    D    L  QM+   I P + T
Sbjct: 67  ALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            N V+   C ++    A     +MM  G +P++VTF+ +++  C   ++E+A  L + ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G +PN   Y TL+   C    +N A ELF  M + G + NV +Y+ L+ G C+     
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I+P V+T+  L     ++ ++  A +L++ M +  V  D + Y + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLC  G + EA ++F  +    C  +   Y+ LI G CKS R++   ++F+ + +  ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           A+ +TY ++I   C  G+ D A ++F  M ++   PD   +N L+ G   N +  K + +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 398 LHRMDER 404
              M +R
Sbjct: 421 FEYMRKR 427



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 6/273 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA L   +     EPNVIT++ LI+   + G  + A  L+  MI       +   PD  
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ------MSVYPDVF 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC  G +D+A+++   M+     P+ V Y ++I GFC +    +  ++F EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  N +T++V++   C  G+ + A ++   M      P+   YN L+DG C  G+V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +F  M       N+ +Y+I+I G CK  ++E A  L+  + SKG+KP V+TY T+
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             G      +  A  LF +M+  G   +   Y+
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 158/308 (51%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           +Y  ++R   +    N+A  LF  M+     P+++ F+ ++  + K  + +    L E M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
             +G+ P     N +M   CL+ +  RA      M  +G + ++ +++ L+NGYC    I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A++L+ ++L  G KP VVTY TL   L +   +  A +LF++M  +G   +   Y   
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           + GLC+ G   +A  L R +   + E ++ +++ LID   K G+L  A EL++ + +  +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             DV TY  +I+ LC  G +D+A  +F  ME  G  P+ V + TL+ G  ++      ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 397 LLHRMDER 404
           + + M ++
Sbjct: 350 IFYEMSQK 357



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 129/238 (54%), Gaps = 6/238 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L+  +      P+V TY +LINGLC  G    A  +F  ++  NG     C P+ 
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNG-----CYPNE 328

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYTT+I G CK   V+   ++  +M  K +  + +TY  +I+G+C     + A+ +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P++ T++V++D LC NGK+E+A  + E M +  +  N   Y  ++ G C  G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           V  A +LF S+ S G K NV +Y+ +I+G+C+   I  A SL+ +M   G  P    Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 233/433 (53%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFG-VV 55
           EA +LF  +   G +P+V  Y  +++G  + G     H ++ L +   +   +  F  V+
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+ V Y T+ID LCK G VD A     QM ++ + 
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+ V +NS++ G C  +   + + LF+EM++QG++P++V F+ ++  LCK G++ EA +L
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++ M+ +G++P+   YNTL+DG C   R++ A +L   M S G K N+ SY+ L++GYCK
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  L+ EML KG+ P V TYNT+  GLF   +   A +L+  M +         
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   +DG CKN    EA ++F++L  +  +LDI +++ +IDGL K GR + A +LF ++P
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+  VVTY ++   L  +G +++   LF  ME  G AP+    N L+   +   E  
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 873 RAGAYLSKLDEKN 885



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 218/399 (54%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC   V++Y+TL+ GLC       A  L   M++G       C PD V Y  
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDS---SCSPDVVSYNI 198

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G   EG VDKA  L L+M    ++PDVVTYN++I G C A + + A+ +F +M+++G
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+PN VT++ I+D LCK  +++ A  + + M+  GV+P+   YNT++DG C    V+RA+
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F  M   G K +  +Y+ +I+G CK + I+ A  ++ +M+ KG+KP  +TY  +  GL
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V+RA  +F +M   GV  +   Y   I G    G   E ++  + +     E D+
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  L+D LCK+G+   A  LF S+ R  +   V  Y IM+H     G + + HDL   
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNL 495

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M A G++P+   FNT++    +     +V+ +  +M ++
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534



 Score =  240 bits (613), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 234/469 (49%), Gaps = 76/469 (16%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F K+   G +P+ +TY+T+I+GLC+      A  +F++MI    + GV  KPD V 
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI----DRGV--KPDHVT 332

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDGLCK   +DKA+ +  QM DK + PD +TY  +I G C A   + A+ +F +M+
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392

Query: 123 DQGVQPN-----------------------------------VVTFSVIMDELCKNGKME 147
           D+GV+PN                                   V T+ +++D LCKNGK  
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL-------------------- 187
           EA  L + MI+ G++P+  +Y  ++ G+   G ++   +L                    
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512

Query: 188 ---------------FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                          F+ M+  G   NV +Y  LI+  CK   ++ A+  +++M+++G+ 
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  V +N+L  GL  + + E+  +LF EM   G+  D   + T +  LCK G ++EA  L
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
             ++  +  + D+ SY+ LIDG C + R+  A +L   +    L  ++V+YN ++H  C 
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G++D A+ LF +M  KGV P    +NT++ G  R+   S+  EL   M
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741



 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 221/400 (55%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   G +PN +TY+T+I+GLC+     +A  +F++M++     GV  KP  V
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK----GV--KPSNV 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIIDGLCK   VD+A+ +  QM D+ + PD VTYN++I G C A   ++A+ +F +M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV+P+ +T+++I+D LCK   ++ A  + + MI  GV+PN   YN L+ G+  TG+ 
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +    M +   + +VF+Y +L++  CKN +   A SL+  M+ KGIKP+V  Y  +
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +     L + M  +G++ +   + T I    K   I E + +F  ++    
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y  LID LCK GR+  A   F+ +    +  + V +N +++ LC   K +K  +
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LFL+M  +G+ PD V FNT++    +     +   L+  M
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636



 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 217/422 (51%), Gaps = 44/422 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V++Y+ +ING    G    A +LF EM       GV   PD V Y TIIDGLCK  
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSLFLEM-------GV--SPDVVTYNTIIDGLCKAQ 239

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD+A+++  QM +K + P+ VTYN++I G C A + + A+ +F +M+D+GV+P+ VT++
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            I+D LCK   ++ A  + + MI  GV+P+   YNT++DG C    +++A+ +F  M   
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G K +  +Y+I+I+G CK + ++ A  ++ +M+ KG+KP   TYN L  G     Q E  
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +   EM  H +  D + Y   +D LCKNG   EA  LF ++     +  +  Y  ++ G
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479

Query: 315 LCKSGRLKIAWEL-----------------------------------FHSLPRGVLIAD 339
             K G L    +L                                   F  + +  L  +
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVTY  +I ALC  G++D A   F  M  +GV P+ V FN+L+ G    ++  KV EL  
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599

Query: 400 RM 401
            M
Sbjct: 600 EM 601



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 213/418 (50%), Gaps = 36/418 (8%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLF---------------EEMING---NGEFG----- 53
           P+  TYS +I   CR G   +    F                +++ G       G     
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 54  -------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM---KDKNINPDVVTYNSVIR 103
                  V C+   V Y T++ GLC     ++A+ELL  M   +D + +PDVV+YN VI 
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF      ++A  LF+EM   GV P+VVT++ I+D LCK  +++ A  + + M++ GV+P
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   YNT++DG C    V+ A+ +F  M   G K +  +Y+ +I+G CK + ++ A  ++
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M+ +G+KP  VTYNT+  GL +   +++A  +F +M   GV  D   Y   IDGLCK 
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             +  A  +F+ +     + +  +Y+CLI G   +G+ +   +    +    L  DV TY
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +++  LC +GK ++A  LF  M  KG+ P    +  ++ G  +    S++ +LL+ M
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 9/330 (2%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD--QGVQPNVVTFSVIMD 138
           ELLL  +  ++       + V R  C ++      R    + D    V P+  T+S+++ 
Sbjct: 33  ELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIG 92

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE-LFVSMESMGCK 197
             C+ G++E       L+++ G R +  V N L+ G C T RV  A   L   M  +GC+
Sbjct: 93  CFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCR 152

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPTVVTYNTLFIGLFEIHQVERA 254
             V SY+ L+ G C  +  E A  L   M+        P VV+YN +  G F   QV++A
Sbjct: 153 LGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKA 212

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           + LF EM   GV+ D   Y T IDGLCK   +  A ++F+ +     + +  +Y+ +IDG
Sbjct: 213 YSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDG 269

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+  + +A  +F  +    +    VTYN +I  LC    +D+A  +F  M  +GV PD
Sbjct: 270 LCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPD 329

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V +NT++ G  +     K   +  +M ++
Sbjct: 330 HVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 12/310 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC---KPDAVI 62
           LF ++   G  P+++ ++T++  LC+ G  + A  L + M         VC   KPD + 
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM---------VCMGLKPDVIS 647

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C    +D+A +LL  M    + P++V+YN+++ G+C A   + A  LF EM+
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P V T++ I++ L ++G+  EA +L   MI+     +   Y+ ++DGFC     +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F S+ SM  + ++ +++I+I+G  K    E A+ L++ + + G+ P+VVTY  + 
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L E   +E    LF  M++ G A ++      I  L   G I  A      L      
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFS 887

Query: 303 LDIRSYSCLI 312
           L+  + S LI
Sbjct: 888 LEASTTSMLI 897



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 6/297 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L   +   G +P+VI+Y+TLI+G C       A+ L + M++         KP+ 
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG------LKPNI 680

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G CK G +D A  L  +M  K + P V TYN+++ G   +   +EA+ L++ 
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+      ++ T+S+I+D  CKN   +EA ++ + +  + ++ +   +N ++DG    GR
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     +   +E    L+S M   G  P     N 
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           L   L +  ++ RA     ++     + +       I    +  Y   A  L    R
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 213/372 (57%), Gaps = 6/372 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G EP+++T+ +L+NG CR      AL +F++M+      G+  KP+ VI
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV------GMGYKPNVVI 188

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDGLCK   VD A +LL +M+   I PDVVTYNS+I G C +   ++A R+   M 
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+V TF+ ++D   K G++ EA +  E MI+  + P+   Y+ L+ G C+  R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E+F  M S GC  +V +YSILINGYCK+K++E  + L+ EM  +G+    VTY  L 
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     ++  A ++F  M   GV  +   Y   + GLC NG I +AL +   ++    +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +Y+ +I G+CK+G +  AW+++ SL    L+ D+ TY  M+  L   G   +A  L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488

Query: 363 FLDMEAKGVAPD 374
           F  M+  G+ P+
Sbjct: 489 FRKMKEDGILPN 500



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 208/398 (52%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+ +++  G   N+ T + L+N  CR     +AL+   +MI    E      P  V + +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE------PSIVTFGS 156

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++G C+   V  A  +  QM      P+VV YN++I G C +   + A  L   M   G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+VVT++ ++  LC +G+  +A++++  M +  + P+ F +N L+D     GRV+ A+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E +  M       ++ +YS+LI G C    ++ A  ++  M+SKG  P VVTY+ L  G 
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +VE   KLF EM + GV  +T  Y   I G C+ G +  A E+FR +       +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L+ GLC +G+++ A  +   + +  + AD+VTYNI+I  +C  G++  A D++  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +G+ PD   + T+MLG  +     +   L  +M E
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 183/331 (55%), Gaps = 8/331 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +F ++   G +PNV+ Y+T+I+GLC++     AL+L   M  +G G       PD 
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDV 221

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++I GLC  G    A  ++  M  + I PDV T+N++I         +EA+  + E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P++VT+S+++  LC   +++EA ++   M+  G  P+   Y+ L++G+C + +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF  M   G   N  +Y+ILI GYC+  ++  A  ++  M+  G+ P ++TYN 
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++E+A  +  +MQ++G+ AD   Y   I G+CK G + +A +++ +L    
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
              DI +Y+ ++ GL K G  + A  LF  +
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKM 492



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 187/368 (50%), Gaps = 10/368 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVI--YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
           +L+LF  M+         C+P   I  ++ ++  + K    D    L  QM+   I  ++
Sbjct: 65  SLDLFFHMVQ--------CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
            T N ++  FC  +  + A     +M+  G +P++VTF  +++  C+  ++ +A  + + 
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +G +PN  +YNT++DG C + +V+ A +L   ME  G   +V +Y+ LI+G C +  
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              A  + S M  + I P V T+N L     +  +V  A + ++EM R  +  D   Y  
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I GLC    + EA E+F  +    C  D+ +YS LI+G CKS +++   +LF  + +  
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           ++ + VTY I+I   C  GK++ A ++F  M   GV P+ + +N L+ G   N +  K +
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416

Query: 396 ELLHRMDE 403
            +L  M +
Sbjct: 417 VILADMQK 424



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 161/326 (49%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D + +L   M      P +  ++ ++         +    L+ +M   G+  N+ T ++
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  ++  A   L  MI++G  P+   + +L++GFC   RV  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K NV  Y+ +I+G CK+K+++ AL L + M   GI P VVTYN+L  GL    +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++   M +  +  D + +   ID   K G + EA E +  +     + DI +YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C   RL  A E+F  +       DVVTY+I+I+  C   K++    LF +M  +GV  + 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V +  L+ G  R  + +   E+  RM
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRM 387



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 154/293 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +++  LF  M+     P++  FS ++  + K  K +    L E M  +G+  N    N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A      M  +G + ++ ++  L+NG+C+   +  AL ++ +M+  G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP VV YNT+  GL +  QV+ A  L + M++ G+  D   Y + I GLC +G   +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   +   +   D+ +++ LID   K GR+  A E +  + R  L  D+VTY+++I+ LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A ++F  M +KG  PD V ++ L+ G  ++ +    ++L   M +R
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  + + GC P+V+TYS LING C++      + LF EM     + GVV   + V
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM----SQRGVV--RNTV 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G C+ G ++ A+E+  +M    ++P+++TYN ++ G C      +A  +  +M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  ++VT+++I+  +CK G++ +A  +   +   G+ P+ + Y T+M G    G  
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 182 NRAKELFVSMESMG 195
             A  LF  M+  G
Sbjct: 483 READALFRKMKEDG 496



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 50/304 (16%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           I GFC++  +      + EM+  G+               +  K++++  L   M+Q   
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRP 77

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   ++ L+       + +    L+  M+ +G  HN+ + +IL+N +C+  ++  ALS
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
              +M+  G +P++VT+ +L                                   ++G C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSL-----------------------------------LNGFC 162

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +   + +AL +F  +  +  + ++  Y+ +IDGLCKS ++  A +L + + +  +  DVV
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TYN +I  LC+ G+   A  +   M  + + PD   FN L+  C++    S+  E    M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282

Query: 402 DERN 405
             R+
Sbjct: 283 IRRS 286


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/389 (35%), Positives = 217/389 (55%), Gaps = 7/389 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++  GC PNV+TY+TL+   CR G    A    E ++    E GV  +P  V + T+++G
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAA----ERLVGVMREGGV--RPSLVTFNTVVNG 234

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK G ++ A+++  +M  + + PD V+YN+++ G+C A   +EA  +F EM  +GV P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVTF+ ++  +C+ G +E A  L+  M + G+R N F +  L+DGFC  G ++ A     
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M     + +V  Y++LINGYCK   ++ A  L  EM +KG+KP VVTY+T+  G  +I 
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
             + AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  L  + D  +Y+
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDG CK G ++ A  L   + +  ++ DVVTY+++I  L    +  +A  L   +  +
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELL 398
              PD + +  LM  C R  E   VV LL
Sbjct: 535 DPVPDNIKYEALM-HCCRTAEFKSVVALL 562



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 204/388 (52%), Gaps = 5/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PNV TY+ L+  LC  G    AL +  + + G G     C P+ V Y T++   C+ 
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAG-----CAPNVVTYNTLVAAFCRA 203

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD A+ L+  M++  + P +VT+N+V+ G C A    +A+++F EM  +G+ P+ V++
Sbjct: 204 GEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSY 263

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++   CK G + EA  +   M Q GV P+   + +L+   C  G + RA  L   M  
Sbjct: 264 NTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRE 323

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + N F+++ LI+G+C+N  ++ AL    EM    I+P+VV YN L  G  ++ +++ 
Sbjct: 324 RGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDE 383

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L  EM+  G+  D   Y T + G CK G    A EL R +       D  +YS LI 
Sbjct: 384 ARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC+  RL  A ELF  + +  L  D  TY  +I   C +G + KA  L  +M  KGV P
Sbjct: 444 GLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V ++ L+ G  ++  T +   LL ++
Sbjct: 504 DVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 185/345 (53%), Gaps = 2/345 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + Y  ++  L  +  +  A+ LL  M    + P+V TYN ++R  C      EA  +
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 118 F-IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
              +M   G  PNVVT++ ++   C+ G+++ A +L+ +M + GVRP+   +NT+++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR+  A+++F  M   G   +  SY+ L++GYCK   +  AL++++EM  KG+ P VV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+ +L   +     +ERA  L  +M+  G+  + + +   IDG C+NG++ +AL   + +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R  + +  +  Y+ LI+G CK GR+  A EL H +    +  DVVTY+ ++   C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D A +L   M  KGV PD + +++L+ G           EL  +M
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 188/347 (54%), Gaps = 21/347 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A+F ++   G  P+V+T+++LI+ +CR G+   A+ L  +M     E G+  + +  
Sbjct: 278 EALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM----RERGL--RMNEF 331

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDG C+ GF+D A   + +M++  I P VV YN +I G+C     +EA+ L  EM
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+VVT+S I+   CK G  + A +L   M++ GV P+A  Y++L+ G C   R+
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ELF  M  +G + + F+Y+ LI+G+CK   ++ ALSL+ EM+ KG+ P VVTY+ L
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY-------RT--------FIDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y       RT         + G    G +
Sbjct: 512 IDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLM 571

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            +A ++++++     +LD   YS LI G C+ G +  A      L R
Sbjct: 572 NQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 203/398 (51%), Gaps = 21/398 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G  P+ ++Y+TL++G C+ G    AL +F EM     + GVV  PD V
Sbjct: 243 DARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEM----AQKGVV--PDVV 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T++I  +C+ G +++A  L+ QM+++ +  +  T+ ++I GFC     ++A     EM
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  +QP+VV ++V+++  CK G+M+EA +L+  M   G++P+   Y+T++ G+C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   G   +  +YS LI G C+ + +  A  L+ +ML  G++P   TY TL
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL----- 296
             G  +   V++A  L DEM + GV  D   Y   IDGL K+    EA  L   L     
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 297 --------RILKC--ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
                    ++ C    + +S   L+ G    G +  A +++ S+       D   Y+++
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           IH  C  G + KA      +   G +P+  +  +L+ G
Sbjct: 597 IHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 161/315 (51%), Gaps = 41/315 (13%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+++ ++ ++  L  +  +  A +LL  M++ GV PN + YN L+   C  G+  R 
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQ--RE 171

Query: 185 KELFV---SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + L V    M   GC  NV +Y+ L+  +C+  E++ A  L   M   G++P++VT+NT+
Sbjct: 172 EALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A K+FDEM R G+  D  +Y T + G CK G + EAL +F  +     
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWEL---------------FHSLPRG---------VLI 337
             D+ +++ LI  +C++G L+ A  L               F +L  G          L+
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351

Query: 338 A-----------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           A            VV YN++I+  C  G+MD+A +L  +MEAKG+ PD V ++T++ G  
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411

Query: 387 RNNETSKVVELLHRM 401
           +  +T    EL  +M
Sbjct: 412 KIGDTDSAFELNRKM 426



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 21/292 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++A G +P+V+TYST+++G C+ G T  A  L  +M+      GVV  PDA+
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK----GVV--PDAI 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GLC+E  +  A EL  +M    + PD  TY ++I G C   +  +A  L  EM
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM--------- 172
           + +GV P+VVT+SV++D L K+ + +EA +LL  +      P+   Y  LM         
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFK 556

Query: 173 ------DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GF + G +N+A +++ SM     K +   YS+LI+G+C+   I  ALS + ++
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G  P   +  +L  GLFE      A  +  E+      AD    +  ID
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 56/362 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A AL  +++  G   N  T++ LI+G CR G    AL   +EM     +  VVC     
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC----- 367

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK G +D+A+EL+ +M+ K + PDVVTY++++ G+C   D++ A  L  +M
Sbjct: 368 -YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+ +T+S ++  LC+  ++ +A +L E M+Q+G++P+ F Y TL+DG C  G V
Sbjct: 427 LKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNV 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
            +A  L   M   G   +V +YS+LI+G                                
Sbjct: 487 QKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEAL 546

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              C+  E +  ++L                Y  ML +  K     Y+ L  G      +
Sbjct: 547 MHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNI 606

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            +A     ++ R G + ++ +  + + GL + G  VEA  + + L       D  +   L
Sbjct: 607 MKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKAL 666

Query: 312 ID 313
           ID
Sbjct: 667 ID 668


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/404 (36%), Positives = 226/404 (55%), Gaps = 15/404 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G   + ++Y TLING+C+ G T  A+ L   +       G + +P+ V
Sbjct: 151 KALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRID------GRLTEPNVV 204

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIID LCK   V +A  L  +M  K I+ +VVTY+++I GFC      EA     EM
Sbjct: 205 MYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEM 264

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V  ++ ++D L K GK++EA  +L ++++  ++PN   YNTL+DG+      
Sbjct: 265 VLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY------ 318

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F ++  MG   +V+SY+I+IN  CK K +E AL+LY EM  K + P  VTYN+L
Sbjct: 319 --AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A+ L DEM   G  A+   Y + I+GLCKNG + +A+ L   ++    
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436

Query: 302 ELDIRSYSCLIDG-LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + D+ + + L+ G LCK  RLK A  LF  L       +V TYNI+I+  C +G +D+A+
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L   ME  G +P+ + F  ++   +   ET K  +LL  M  R
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIAR 540



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 197/412 (47%), Gaps = 37/412 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPD 59
           +A   F ++      P +I ++ +++   +  H  T+V+L+   E+           +PD
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLEL--------KAIQPD 97

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
                 +I+  C  G ++ A  +L ++      PD VT  ++I+G C      +A     
Sbjct: 98  FFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHD 157

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ QG + + V++  +++ +CK G+   A QLL  +      PN  +YNT++D  C   
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK 217

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  LF  M   G   NV +YS +I+G+C   ++  AL   +EM+ K I P V  YN
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 240 TLFIGLFEIHQVERAFK-------------------LFDEMQRH--------GVAADTWA 272
           TL   L +  +V+ A                     L D   +H        GV  D W+
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWS 337

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+ LCK   + EAL L++ +       +  +Y+ LIDGLCKSGR+  AW+L   + 
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                A+V+TYN +I+ LC +G++DKA  L   M+ +G+ PD    N L+ G
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 27/374 (7%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + +  I+D   K         L  +++ K I PD  T N +I  FC+    N A  +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ VT + ++  LC  G++++A    + ++  G R +   Y TL++G C 
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A +L   ++    + NV  Y+ +I+  CK K +  A +L+SEM  KGI   VVT
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE--------- 288
           Y+ +  G   + ++  A    +EM    +  D + Y T +D L K G + E         
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 289 ------------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                             A  +F  + ++    D+ SY+ +I+ LCK  R++ A  L+  
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  ++ + VTYN +I  LC  G++  A DL  +M  +G   + + +N+L+ G  +N +
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420

Query: 391 TSKVVELLHRMDER 404
             K + L+++M ++
Sbjct: 421 LDKAIALINKMKDQ 434



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 15/252 (5%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PNVITY+TLI+G  +             + N  G  GV   PD   Y  +I+ LCK   
Sbjct: 305 KPNVITYNTLIDGYAK------------HVFNAVGLMGVT--PDVWSYNIMINRLCKIKR 350

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V++A  L  +M  KN+ P+ VTYNS+I G C +   + A  L  EM D+G   NV+T++ 
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNS 410

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF-CLTGRVNRAKELFVSMESM 194
           +++ LCKNG++++A  L+  M   G++P+ +  N L+ G  C   R+  A+ LF  +   
Sbjct: 411 LINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDK 470

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   NV++Y+I+I G+CK   ++ A +L S+M   G  P  +T+  +   L E  + ++A
Sbjct: 471 GYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKA 530

Query: 255 FKLFDEMQRHGV 266
            KL  EM   G+
Sbjct: 531 EKLLCEMIARGL 542



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   G  P+V +Y+ +IN LC+      ALNL++EM   N        P+ V 
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN------MVPNTVT 372

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++IDGLCK G +  A +L+ +M D+  + +V+TYNS+I G C     ++A  L  +M 
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432

Query: 123 DQGVQPNVVTFSVIMDEL-CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           DQG+QP++ T ++++  L CK  +++ A  L + ++  G  PN + YN ++ G C  G +
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLL 492

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + A  L   ME  GC  N  ++ I+I    +  E + A  L  EM+++G+
Sbjct: 493 DEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 7/126 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLING-LCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A AL  K+K  G +P++ T + L++G LC+      A  LF+++++          P+ 
Sbjct: 423 KAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYH------PNV 476

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  II G CKEG +D+A  L  +M+D   +P+ +T+  +I       ++++A++L  E
Sbjct: 477 YTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCE 536

Query: 121 MMDQGV 126
           M+ +G+
Sbjct: 537 MIARGL 542



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 69/169 (40%)

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ AL  +  ML     P ++ +N +     ++        L   ++   +  D +  
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              I+  C  G I  A  +   +     + D  + + LI GLC  G++K A      L  
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
                D V+Y  +I+ +C  G+   A  L   ++ +   P+ V +NT++
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTII 210


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  250 bits (639), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 222/403 (55%), Gaps = 21/403 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G   + ++Y TLI+GLC+ G T  AL+L + +       G + + +AV
Sbjct: 143 QAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQLNAV 196

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I G+CK+  V+ A +L  +M  K I+P+VVTY+++I GF       +A  LF ++
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+  TF++++D  CK+ KM+E   +  +M++ G+ P+   YN+LMDG+CL   V
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK +F +M   G   ++ SY+ILING+CK K+++ A++L++EM  K I P VVTYN+L
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A +L D+M   GV  +   Y + ID L K   + +A+ L    +    
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ LIDGLCK     I                V TYN+MIH  C  G  D+A  
Sbjct: 437 QPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGLFDEALS 481

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M+     P+ V +   +   + NNE  K  +L   M  R
Sbjct: 482 LLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITR 524



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 188/406 (46%), Gaps = 45/406 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N I+YS+             A++LF  ++  N        P A  +  I+  L K     
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPT------PPAFEFNKILGSLVKSKHYH 103

Query: 78  KAKELLLQMKDKNINP---------------------------------------DVVTY 98
               L  +M+ + I P                                       D V+Y
Sbjct: 104 TVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSY 163

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
            ++I G C   ++  A  L   +  + VQ N V ++ ++  +CK+  + +A  L   M+ 
Sbjct: 164 GTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVS 223

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN   Y+ L+ GF + G++  A +LF  +     K + ++++IL++G+CK+++++ 
Sbjct: 224 KGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKE 283

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             ++++ M+ +GI P VVTYN+L  G   + +V  A  +F+ M + GV  D  +Y   I+
Sbjct: 284 GKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILIN 343

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK   + +A+ LF  +       ++ +Y+ LIDGL KSGR+  A +L   +    +  
Sbjct: 344 GFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPP 403

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +++TYN +I AL    ++DKA  L    + +G+ P    +  L+ G
Sbjct: 404 NILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 39/350 (11%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + ++Y+S    F   ND ++A  LF  ++ Q   P    F+ I+  L K+        L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTG----RVNRAKELFVSMESMGCKHNVFSYSILING 209
           + M   G++PN F  N L+  FC  G    ++++A      + ++G   +  SY  LI+G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 210 Y-----------------------------------CKNKEIEGALSLYSEMLSKGIKPT 234
                                               CK+K +  A  LYSEM+SKGI P 
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+ L  G F + +++ A  LF+++    +  D + +   +DG CK+  + E   +F 
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+ +Y+ L+DG C    +  A  +F+++ +G +  D+ +YNI+I+  C   
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           K+DKA +LF +M  K + P+ V +N+L+ G  ++   S  ++L+ +M +R
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 399



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 157/321 (48%), Gaps = 49/321 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +A  L++++ + G  PNV+TYS LI+G    G    A++LF ++I               
Sbjct: 213 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 272

Query: 47  ----------NGNGEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                      G   F ++ K    PD V Y +++DG C    V+ AK +   M    +N
Sbjct: 273 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN 332

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+ +YN +I GFC     ++A  LF EM  + + PNVVT++ ++D L K+G++  A QL
Sbjct: 333 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 392

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI----- 207
           ++ M   GV PN   YN+++D    T +V++A  L    +  G + ++++Y+ILI     
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452

Query: 208 ---------------NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                          +G+CK    + ALSL S+M      P  VTY      L + ++ +
Sbjct: 453 VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEND 512

Query: 253 RAFKLFDEMQRHGVAADTWAY 273
           +A KLF EM   G+   + +Y
Sbjct: 513 KAEKLFREMITRGLLNRSASY 533



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 4/223 (1%)

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +     +S   +  K N  SYS     +  N +++ A+SL++ +L +   P    +N + 
Sbjct: 34  KNTHFLISFLILLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKIL 93

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV----EALELFRTLRI 298
             L +         L  +M+  G+  + +     I   C+ G I     +A      L  
Sbjct: 94  GSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVA 153

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L   LD  SY  LI GLCK G  + A +L   +   ++  + V YN +I+ +C D  ++ 
Sbjct: 154 LGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVND 213

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A DL+ +M +KG++P+ V ++ L+ G     +    ++L +++
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 211/371 (56%), Gaps = 9/371 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+  FG EP+V+T S+LING C+      A++L  +M        + CK D VI
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE------MRCKLDVVI 176

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG CK G V+ A  L  +M+   +  D VTYNS++ G C +   ++A RL  +M+
Sbjct: 177 YNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMV 236

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV+TF+ +++   + GK  EA +  E MI+  + P+ F YN+++ G C+ G+V+
Sbjct: 237 MRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVD 296

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK++   M + GC  +V +Y+ LING+CK K ++    L  EM  +G+    VT+NT+ 
Sbjct: 297 EAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTII 356

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+  + + A ++F  M   G   +   Y   + GLC N  + +AL LF +++  + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEME 413

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LDI +Y+ +I G+C  G ++ AW+LF SL    L  DVVTY  MI   C     DKA  L
Sbjct: 414 LDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFL 473

Query: 363 FLDMEAKGVAP 373
           +  M+  G+ P
Sbjct: 474 YRKMQEDGLLP 484



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 217/399 (54%), Gaps = 9/399 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF  ++  G   ++ TY+ +IN LCR    ++AL++  +M+    +FG   +PD V  +
Sbjct: 90  SLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I+G C+   V  A +L+ +M++     DVV YN++I GFC     N A  LF  M   
Sbjct: 144 SLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERD 203

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + VT++ ++  LC +G+  +A++L+  M+   + PN   +  L++ F   G+   A
Sbjct: 204 GVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEA 263

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K+ +  M       +VF+Y+ +I+G C + +++ A  +   M++KG  P VVTYNTL  G
Sbjct: 264 KKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLING 323

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +V+   KL  EM + G+  DT  + T I G  + G    A E+F  +       +
Sbjct: 324 FCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPN 380

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           IR+YS L+ GLC + R++ A  LF S+ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 381 IRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFC 440

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  KG+ PD V + T++ G  R     K   L  +M E
Sbjct: 441 SLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQE 479



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 140/265 (52%), Gaps = 9/265 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA L   +      PNVIT++ LIN   R G  + A   +EEMI           PD  
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR------CIDPDVF 280

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC  G VD+AK++L  M  K   PDVVTYN++I GFC     +E  +L  EM
Sbjct: 281 TYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM 340

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  + VTF+ I+    + G+ + A ++   M   G RPN   Y+ L+ G C   RV
Sbjct: 341 SQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRV 397

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF SM+    + ++ +Y+I+I+G C    +E A  L+  +  KG++P VVTY T+
Sbjct: 398 EKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTM 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             G       ++A  L+ +MQ  G+
Sbjct: 458 ISGFCRKRLWDKADFLYRKMQEDGL 482



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 164/330 (49%), Gaps = 2/330 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A +L   M      P +V ++ ++     + + +    LF  M   G+  ++ T+++
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LC+  +   A  ++  M++ G  P+    ++L++GFC   RV  A +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           CK +V  Y+ +I+G+CK   +  AL L+  M   G++   VTYN+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC-ELDIRSYSCLIDG 314
           +L  +M    +  +   +   I+   + G  +EA + +  + I +C + D+ +Y+ +I G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSMIHG 288

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC  G++  A ++   +       DVVTYN +I+  C   ++D+   L  +M  +G+  D
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V FNT++ G  +        E+  RM  R
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 130/233 (55%), Gaps = 9/233 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   + ++     +P+V TY+++I+GLC  G    A  + + M+         C PD 
Sbjct: 261 LEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG------CFPDV 314

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   VD+  +L+ +M  + +  D VT+N++I+G+  A   + A+ +F  
Sbjct: 315 VTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSR 374

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +PN+ T+S+++  LC N ++E+A  L E M +  +  +   YN ++ G C+ G 
Sbjct: 375 M---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGN 431

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           V  A +LF S+   G + +V +Y+ +I+G+C+ +  + A  LY +M   G+ P
Sbjct: 432 VEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 87/190 (45%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+ L+  M+     P++V ++ L   + +    +    LF  M+  G+  D + Y  
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+ LC+    V AL +   +     E D+ + S LI+G C+  R+  A +L   +    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              DVV YN +I   C  G ++ A  LF  ME  GV  D V +N+L+ G   +   S   
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 396 ELLHRMDERN 405
            L+  M  R+
Sbjct: 230 RLMRDMVMRD 239


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/434 (32%), Positives = 235/434 (54%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE------FGVV 55
           EA  LF  +   G +P+V  Y  +++G    G  +  ++ F +++ GNG       F +V
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKG-ALSEMHSFLDLMVGNGISPNHYIFNIV 385

Query: 56  ------------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                                     P+ V Y T+ID LCK G VD A+    QM ++ +
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P++V + S++ G C  +   +A  LF EM++QG+ PNVV F+ IM  LC  G++ +A +
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L++LM ++G RP+   YN L+ G CL G+ + A +L   M S+G K N  +Y+ L++GYC
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           ++  I+ A S++ EMLS GI P VVTYNT+  GLF+  +   A +L+  M   G     +
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   ++GL KN  + EAL++F++L     ++DI +++ +I  L K GR + A  LF ++
Sbjct: 626 TYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ DV TY ++   L  +G +++   +F +ME  G AP+ +  N L+   +   + 
Sbjct: 686 SANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDI 745

Query: 392 SKVVELLHRMDERN 405
           S+    L ++DE+N
Sbjct: 746 SRAGAYLSKIDEKN 759



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 212/398 (53%), Gaps = 6/398 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
             L  ++   GC PNV++Y+TL+ G C       AL L   M +G       C P+ V Y
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR---SCPPNLVSY 207

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
            T+I+G   EG VDKA  L L M D+ I P+VVTY  VI G C A   + A+ +F +M+D
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV+PN+VT++ ++      G+ +E  ++L+ M   G+ P+ F Y  L+D  C  G+   
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A++LF SM   G K +V  Y I+++GY     +    S    M+  GI P    +N +F 
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              +   +  A  +F++M++ G++ +   Y T ID LCK G + +A   F  +       
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I  ++ L+ GLC   + + A ELF  +    +  +VV +N ++  LC +G++ KA  L 
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI 507

Query: 364 LDMEAKGVAPDCVAFNTLMLG-CI--RNNETSKVVELL 398
             ME  G  PD +++N L+ G C+  + +E SK+++++
Sbjct: 508 DLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM 545



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 209/425 (49%), Gaps = 37/425 (8%)

Query: 17  PNVITYSTLINGLCRTG---HTIVALNLF-------------EEMING------NGE-FG 53
           P+V TYS L+   CR G   H   A  L                ++ G       GE  G
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 54  VV--------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN---PDVVTYNSVI 102
           V+        C P+ V Y T++ G C E   ++A ELL  M D  +    P++V+YN+VI
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            GF      ++A  LF++M DQG+ PNVVT+++++D LCK   ++ A  + + MI  GVR
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   Y  L+ G+   G+      +   M + G + + F+Y +L++  CK  +   A  L
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M+ KGIKP V  Y  +  G      +       D M  +G++ + + +        K
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              I EA+++F  +R      ++ +Y+ LID LCK GR+  A   F+ +    +  ++V 
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CI--RNNETSKVVELLH 399
           +  +++ LC   K +KA +LF +M  +G+ P+ V FNT+M   C   R  +  ++++L+ 
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511

Query: 400 RMDER 404
           R+  R
Sbjct: 512 RVGTR 516



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 208/457 (45%), Gaps = 76/457 (16%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN+++Y+T+ING    G    A NLF +M +          P+ V YT +IDGLCK  
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG------IPPNVVTYTIVIDGLCKAQ 253

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGF----------------------------- 105
            VD+A+ +  QM DK + P++VTY  +I G+                             
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYG 313

Query: 106 ------CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
                 C      EA++LF  M+ +G++P+V  + +I+      G + E    L+LM+  
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN 373

Query: 160 GVRPNAFVYN-----------------------------------TLMDGFCLTGRVNRA 184
           G+ PN +++N                                   TL+D  C  GRV+ A
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           +  F  M + G   N+  ++ L+ G C   + E A  L+ EM+++GI P VV +NT+   
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    +V +A +L D M+R G   D  +Y   I G C  G   EA +L   +  +  + +
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ L+ G C+ GR+  A+ +F  +    +   VVTYN ++H L    +  +A +L+L
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M   G       +N ++ G  +NN   + +++   +
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 151/319 (47%), Gaps = 5/319 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIMDELCKNGKMEEA 149
           + PDV TY+ ++  FC           F  ++  G    +VV  + ++  LC   ++ EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 150 -SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSI 205
              LL  M ++G  PN   YNTL+ GFC   R   A EL   M   +   C  N+ SY+ 
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +ING+    +++ A +L+ +M  +GI P VVTY  +  GL +   V+RA  +F +M   G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V  +   Y   I G    G   E + + + +     E D  +Y  L+D LCK G+   A 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF S+ R  +  DV  Y I++H     G + + H     M   G++P+   FN +    
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 386 IRNNETSKVVELLHRMDER 404
            +     + +++ ++M ++
Sbjct: 390 AKKAMIGEAMDIFNKMRQQ 408



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   ++  G  P++I+Y+ LI G C  G T  A  L + M++      V  KP+ 
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS------VGLKPNE 554

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G C++G +D A  +  +M    I P VVTYN+++ G       +EAK L++ 
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLN 614

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q ++ T+++I++ L KN  ++EA ++ + +    ++ +   +N ++      GR
Sbjct: 615 MITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGR 674

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  LF ++ + G   +V +Y ++     +   +E    ++SEM   G  P  +  N 
Sbjct: 675 KEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNF 734

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 735 LVRRLLLRGDISRA 748



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ L   + + G +PN  TY+TL++G CR G    A ++F+EM++ NG       P  V
Sbjct: 537 EASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS-NG-----ITPVVV 590

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+ GL K     +AKEL L M        + TYN ++ G    N  +EA ++F  +
Sbjct: 591 TYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSL 650

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +Q +++TF++++  L K+G+ E+A  L   +   G+ P+   Y  + +     G +
Sbjct: 651 CSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSL 710

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +F  ME  GC  N    + L+       +I  A +  S++  K       T  ++
Sbjct: 711 EEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEAST-TSM 769

Query: 242 FIGLF--EIHQVE 252
            I LF  E HQ +
Sbjct: 770 LISLFSREEHQAK 782



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 11/163 (6%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--CKNGYIVEALELF-----RTLR--ILK 300
            V+ A KLFDE   H   A   A+   +  +            EL      R +R    K
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK 89

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              D+ +YS L+   C+ GRL+  +  F   L  G  + DVV  N ++  LC   ++ +A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 360 HDLFL-DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             + L  M   G  P+ V++NTL+ G    N   + +ELLH M
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMM 192


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 217/403 (53%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A    L A G   +  +Y +LINGLC+ G T  AL L ++M         + +P+ +
Sbjct: 143 KAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED------LVRPNLI 196

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+IDGLCK+  +  A  L   +  + I  DVV YNS+I G C      EA RL   M
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P+  TF++++D LCK G++ EA  +  +M++ G +P+   YN LM+GFCL+  V
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNV 316

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ELF  M   G + +V +Y++LINGYCK   ++ A+ L+ E+  K + P + TYN+L
Sbjct: 317 SEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL 376

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++    +L DEM   G + D   Y  F+D  CK+    +A+ LFR + +   
Sbjct: 377 IDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGI 435

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y  +++  CK  +LKIA E    L       +V TY IMI+ALC D   D+A  
Sbjct: 436 WPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMT 495

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M+     PD V F T++      NET K  +L   M ER
Sbjct: 496 LLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIER 538



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 197/380 (51%), Gaps = 7/380 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +LF++L + G  P++ T + LIN  C   H   A +L   ++    + G   +P+ V 
Sbjct: 74  AISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTIL----KMGF--QPNMVT 127

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+I+G C  G V KA    L +  K    D  +Y S+I G C    + +A +L  +M 
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKME 187

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V+PN++T+S ++D LCK+  + +A +L  L+   G+  +   YN+L+ G C  G+  
Sbjct: 188 EDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWR 247

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       + ++++IL++  CK   I  A  +++ M+ +G KP +VTYN L 
Sbjct: 248 EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALM 307

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V  A +LF+ M + G+  D   Y   I+G CK   + EA+ LF+ +R     
Sbjct: 308 EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLV 367

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ LIDGLCK GR+    EL   +       D+VTYNI + A C     +KA  L
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
           F  +  +G+ PD   ++ ++
Sbjct: 428 FRQI-VQGIWPDFYMYDVIV 446



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 181/348 (52%), Gaps = 2/348 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P   ++  ++  + + G    A  L  Q+  K I P + T   +I  +C+    + A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFC 176
              ++  G QPN+VTF+ +++  C NG + +A    L+LM + G   + F Y +L++G C
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK-GYPLDEFSYGSLINGLC 171

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+   A +L   ME    + N+ +YS +I+G CK++ I  AL L+S + S+GI   VV
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN+L  G   + Q   A +L   M R  +  D + +   +D LCK G IVEA  +F  +
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + DI +Y+ L++G C S  +  A ELF+ + +  L  DV+ YN++I+  C    +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A  LF ++  K + P+   +N+L+ G  +    S V EL+  M +R
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 154/300 (51%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M  K+  P +  ++ ++           A  LF ++  +G+ P++ T +++++  C   
Sbjct: 45  RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            +  A  LL  ++++G +PN   +NTL++GFC+ G V++A    + + + G   + FSY 
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYG 164

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LING CKN +   AL L  +M    ++P ++TY+T+  GL +   +  A +LF  +   
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  D  AY + I G C  G   EA  L   +       D  +++ L+D LCK GR+  A
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +F  + +     D+VTYN ++   C    + +A +LF  M  +G+ PD + +N L+ G
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 148/269 (55%), Gaps = 7/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  +   G +P+++TY+ L+ G C + +   A  LF  M+    E      PD 
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE------PDV 335

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+G CK   VD+A  L  +++ KN+ P++ TYNS+I G C     +  + L  E
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G  P++VT+++ +D  CK+   E+A  L   ++Q G+ P+ ++Y+ +++ FC   +
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEK 454

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+E    +   GC  NV +Y+I+IN  CK+   + A++L S+M      P  VT+ T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +   L E ++ ++A KL  EM   G+  D
Sbjct: 515 IIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 146/287 (50%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+ +   P +  F  ++  + + G    A  L   +   G+ P+      L++ +C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              ++ A  L  ++  MG + N+ +++ LING+C N  +  A++   ++++KG      +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y +L  GL +  Q   A +L  +M+   V  +   Y T IDGLCK+  I +AL LF  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                +D+ +Y+ LI G C  G+ + A  L   + RG +  D  T+NI++ ALC +G++ 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  +F  M  +G  PD V +N LM G   +N  S+  EL +RM +R
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 74/157 (47%)

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           + H V+     F+ M R       + +   +  + + G+   A+ LF  L        I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           + + LI+  C    L  A+ L  ++ +     ++VT+N +I+  C +G + KA    LD+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            AKG   D  ++ +L+ G  +N +T   ++LL +M+E
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEE 188


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 225/435 (51%), Gaps = 42/435 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++   G  P+ I Y+ LI+G  + G    A  L+EEM++      V  +P    Y +
Sbjct: 30  LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVS------VGLEPSIYTYNS 83

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-KRLFIEMMDQ 124
           +++  CKE  + +A EL   M +K   PDVVTY+++I G C      EA + LF +M+++
Sbjct: 84  LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   N V ++ +++ LCK+  +E A +LLE M   G  P+   YNT++ G C  G+V+ A
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K+ F SM S G   +V +Y+ L++   K  + + A+ L+ ++++KG  P  VTYN++ +G
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263

Query: 245 LFE-----------------------------------IHQVERAFKLFDEMQRHGVAAD 269
           L                                       +V+ A K+ +EM + G   D
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   +DGLCK   + +A ELF T+    C  DI SYS +++GLCK+ ++  A  LF 
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    L+ DVVT+NI++  LC  GK+D+A DL   M   G APD VA+NTLM G  +  
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443

Query: 390 ETSKVVELLHRMDER 404
              +   L   M E+
Sbjct: 444 RHIQADRLTQAMKEK 458



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/375 (36%), Positives = 214/375 (57%), Gaps = 7/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-LFEEMINGNGEFGVVCKPDA 60
           EA  LF  +   G EP+V+TYST+I+GLC+TG    AL  LF +MI    E G  C  + 
Sbjct: 96  EAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI----ERG--CSANT 149

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I+GLCK+  +++A +LL +M  K   PD +TYN+++ G C     +EAK+ F  
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+VV ++ ++D L K GK +EA +L + +I  G  P+   YN+++ G      
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+E+F  M + GC  N  +YSI+++G+C+ K+++ A  +  EM   G  P VVTYN 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + + V++A +LF  M  +G A D  +Y   ++GLCK   + +A  LF  +   K
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +++ L+DGLCK+G+L  A +L   +       D V YN +++ L   G+  +A 
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 361 DLFLDMEAKGVAPDC 375
            L   M+ KG   DC
Sbjct: 450 RLTQAMKEKGFLSDC 464



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 36/385 (9%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C P+   +  ++   CK+G +    +L  QM D  I+PD + YN +I G+      +EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           RL+ EM+  G++P++ T++ +++  CK  KM+EA +L + M + G  P+   Y+T++ G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 176 CLTGRVNRAKE-LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           C TG+V  A E LF  M   GC  N  +Y+ LING CK++ IE A  L  EM SKG  P 
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL---- 290
            +TYNT+  GL  + +V  A + FD M   G + D  AY   +D L K G   EA+    
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 291 -------------------------------ELFRTLRILKCELDIRSYSCLIDGLCKSG 319
                                          E+F+ +    C  +  +YS ++ G C++ 
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           ++  A ++   + +   + DVVTYNI++  LC    +DKAH+LF  M   G APD V+++
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
            ++ G  + N+      L  RM ER
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIER 388



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 174/316 (55%), Gaps = 1/316 (0%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           +  +P+  T+  V++ FC      +  +LF +M+D G+ P+ + +++++D   K G+++E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A++L E M+ +G+ P+ + YN+L++ FC   ++  A ELF +M   G + +V +YS +I+
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 209 GYCKNKEIEGALS-LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           G CK  ++  AL  L+ +M+ +G     V YN L  GL +   +ERA+KL +EM   G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D   Y T + GLC+ G + EA + F ++       D+ +Y+ L+D L K G+   A +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +     + D VTYN ++  L     MD+A ++F  M A G AP+   ++ ++ G  R
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 388 NNETSKVVELLHRMDE 403
             +     ++L  M +
Sbjct: 302 AKKVDDAHKVLEEMSK 317



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 115/200 (57%), Gaps = 6/200 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+ A GC PN  TYS +++G CR      A  + EEM     + G V  PD V
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM----SKIGAV--PDVV 325

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLCK   VDKA EL   M D    PD+V+Y+ V+ G C  N  ++A+ LF  M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+VVTF+++MD LCK GK++EA  LL+ M   G  P+   YNTLM+G    GR 
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445

Query: 182 NRAKELFVSMESMGCKHNVF 201
            +A  L  +M+  G   + F
Sbjct: 446 IQADRLTQAMKEKGFLSDCF 465



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 36/141 (25%)

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGV------------------ 335
           +C  +  ++  ++   CK G+L+  ++LF  +      P G+                  
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 336 -----------LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                      L   + TYN +++A C + KM +A +LF  M  KG  PD V ++T++ G
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 385 CIRNNETSKVVELL-HRMDER 404
             +  + ++ +E+L H+M ER
Sbjct: 123 LCKTGKVTEALEMLFHKMIER 143


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 212/369 (57%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+++T+ +L++G C       A +L   M+    E      P+ V+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDGLCK G ++ A ELL +M+ K +  DVVTYN+++ G CY+   ++A R+  +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+VVTF+ ++D   K G ++EA +L + MIQ  V PN   YN++++G C+ GR+ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK+ F  M S GC  NV +Y+ LI+G+CK + ++  + L+  M  +G    + TYNTL 
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ ++  A  +F  M    V  D   +   + GLC NG I  AL  F  +R  +  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           + I +Y+ +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 363 FLDMEAKGV 371
              M+ +G+
Sbjct: 479 IRRMKEEGI 487



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 6/395 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K++ +G   ++ +++ LI+  CR      AL++  +M+    E      P  V + +++ 
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLH 149

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G C    +  A  L++ M      P+VV YN++I G C   + N A  L  EM  +G+  
Sbjct: 150 GFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +VVT++ ++  LC +G+  +A+++L  M++  + P+   +  L+D F   G ++ A+EL+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M       N  +Y+ +ING C +  +  A   +  M SKG  P VVTYNTL  G  + 
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             V+   KLF  M   G  AD + Y T I G C+ G +  AL++F  +   +   DI ++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             L+ GLC +G ++ A   F  +        +V YNIMIH LC   K++KA +LF  +  
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +GV PD   +  ++LG  +N    +  EL+ RM E
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 149/298 (50%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF ++    +A  LF EM+     P++V F+ ++       + E      + M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G + ++ ++  L++G+C    I  A SL 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+  G +P VV YNTL  GL +  ++  A +L +EM++ G+ AD   Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G   +A  + R +       D+ +++ LID   K G L  A EL+  + +  +  + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           N +I+ LC  G++  A   F  M +KG  P+ V +NTL+ G  +     + ++L  RM
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 95/200 (47%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E A +L+ EM+     P++V +  L      + + E       +M+ +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  AL +   +  L  E  I ++  L+ G C   R+  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   + +     +VV YN +I  LC +G+++ A +L  +ME KG+  D V +NTL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 386 IRNNETSKVVELLHRMDERN 405
             +   S    +L  M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/404 (34%), Positives = 232/404 (57%), Gaps = 7/404 (1%)

Query: 1   MEAA-ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +EAA +LF ++KA G  P+++TY++LI+G  + G    A+++FEEM +        C+PD
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG------CEPD 320

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y ++I+  CK   + +A E L  MK + + P+VVTY+++I  FC A    EA + F+
Sbjct: 321 VITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFV 380

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G+QPN  T++ ++D  CK G + EA +L   M Q GV  N   Y  L+DG C  G
Sbjct: 381 DMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDG 440

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A+ELF ++   G   N   Y+ L +GY K K +E A+ +  EM  K +KP ++ Y 
Sbjct: 441 RMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYG 500

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T   GL   +++E +  +  EM   G+ A+++ Y T ID   K G   EA+ L + ++ L
Sbjct: 501 TKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL 560

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++ + +Y  LIDGLCK G ++ A   F  + R  L  +++ Y  +I  LC +  +++A
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +LF +M  KG++PD + + +L+ G +++    + + L +RM E
Sbjct: 621 KNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 195/409 (47%), Gaps = 41/409 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++F ++K  GCEP+VITY++LIN  C+      A     E ++G  + G+  +P+ V 
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF----EYLHGMKQRGL--QPNVVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+ID  CK G + +A +  + M    + P+  TY S+I   C   D NEA +L  EM 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV  N+VT++ ++D LC++G+M EA +L   +++ G   N  +Y +L  G+     + 
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG------------------------ 218
           +A ++   M     K ++  Y   I G C+  EIE                         
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 219 -----------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                      A++L  EM   GIK TVVTY  L  GL +I  V++A + FD M R+G+ 
Sbjct: 539 DAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQ 598

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y   IDGLCKN  + EA  LF  +       D   Y+ LIDG  K G    A  L
Sbjct: 599 PNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSL 658

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            + +    +  D+  Y  +I      G++  A  L  +M  KG+ PD V
Sbjct: 659 RNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 181/347 (52%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC+P   ++ T+ + L   G +++A++   +M    + P V + N ++     ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
              F +M+  G+ P+V T+++++  L + G +E A  L E M   G+RP+   YN+L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G +  A  +F  M+  GC+ +V +Y+ LIN +CK + I  A      M  +G++P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+TL     +   +  A K F +M R G+  + + Y + ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++     L+I +Y+ L+DGLC+ GR++ A ELF +L +     +   Y  + H      
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M+KA D+  +M  K + PD + + T + G  R NE    + ++  M
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 197/397 (49%), Gaps = 41/397 (10%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G +PNV+TYSTLI+  C+ G  + A   F +MI       V  +P+   YT++ID 
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIR------VGLQPNEFTYTSLIDA 400

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF----------- 118
            CK G +++A +L  +M+   +N ++VTY +++ G C      EA+ LF           
Sbjct: 401 NCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLN 460

Query: 119 ------------------------IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
                                    EM  + ++P+++ +   +  LC+  ++E++  ++ 
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIR 520

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+  G+  N+++Y TL+D +   G+   A  L   M+ +G K  V +Y +LI+G CK  
Sbjct: 521 EMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A+  +  M   G++P ++ Y  L  GL +   +E A  LF+EM   G++ D   Y 
Sbjct: 581 LVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYT 640

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + IDG  K+G   EAL L   +  +  ELD+ +Y+ LI G  + G++++A  L   + R 
Sbjct: 641 SLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRK 700

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            +I D V    ++      G +++A  L  DM  +G+
Sbjct: 701 GIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 183/389 (47%), Gaps = 6/389 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P    + TL N L   G    A   F +M     +F V+  P       ++  L K  
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKM----NKFRVL--PKVRSCNELLHRLSKSS 230

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
               A      M    ++P V TYN VI       D   A+ LF EM  +G++P++VT++
Sbjct: 231 KGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYN 290

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D   K G +  A  + E M   G  P+   YN+L++ FC   R+ +A E    M+  
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR 350

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G + NV +YS LI+ +CK   +  A   + +M+  G++P   TY +L     +I  +  A
Sbjct: 351 GLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEA 410

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           FKL  EMQ+ GV  +   Y   +DGLC++G + EA ELF  L      L+ + Y+ L  G
Sbjct: 411 FKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             K+  ++ A ++   + +  L  D++ Y   I  LC   +++ +  +  +M   G+  +
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTAN 530

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              + TL+    +  +T++ V LL  M +
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQD 559



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 156/293 (53%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA++ F +M    V P V + + ++  L K+ K   A    + M+  G+ P+ F YN ++
Sbjct: 199 EARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVI 258

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                 G +  A+ LF  M++ G + ++ +Y+ LI+GY K   + GA+S++ EM   G +
Sbjct: 259 GCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCE 318

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TYN+L     +  ++ +AF+    M++ G+  +   Y T ID  CK G ++EA + 
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +  +  + +  +Y+ LID  CK G L  A++L   + +  +  ++VTY  ++  LC 
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DG+M +A +LF  +   G   +   + +L  G I+     K +++L  M+++N
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 6/255 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+++ Y T I GLCR      ++ +  EM++           ++ IYTT+ID   K G 
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG------LTANSYIYTTLIDAYFKVGK 546

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A  LL +M+D  I   VVTY  +I G C      +A R F  M   G+QPN++ ++ 
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D LCKN  +EEA  L   M+  G+ P+  VY +L+DG    G    A  L   M  +G
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + ++ +Y+ LI G+ +  +++ A SL  EML KGI P  V    L    +E+  +  A 
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726

Query: 256 KLFDEMQRHGVAADT 270
            L D+M R G+ + T
Sbjct: 727 ALHDDMARRGLISGT 741



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%)

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P    ++TLF  L ++  +E A + F +M +  V     +    +  L K+     AL 
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
            F+ + +      + +Y+ +I  L + G L+ A  LF  +    L  D+VTYN +I    
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             G +  A  +F +M+  G  PD + +N+L+    +     +  E LH M +R
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR 350



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 29/163 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A   F  +   G +PN++ Y+ LI+GLC+      A NLF EM               I
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643

Query: 47  NGNGEFG--------------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +GN + G              +  + D   YT++I G  + G V  AK LL +M  K I 
Sbjct: 644 DGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGII 703

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           PD V    ++R +    D NEA  L  +M  +G+    +  +V
Sbjct: 704 PDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITV 746


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 212/369 (57%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+   G EP+++T+ +L++G C       A +L   M+    E      P+ V+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDGLCK G ++ A ELL +M+ K +  DVVTYN+++ G CY+   ++A R+  +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+VVTF+ ++D   K G ++EA +L + MIQ  V PN   YN++++G C+ GR+ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK+ F  M S GC  NV +Y+ LI+G+CK + ++  + L+  M  +G    + TYNTL 
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ ++  A  +F  M    V  D   +   + GLC NG I  AL  F  +R  +  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           + I +Y+ +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 363 FLDMEAKGV 371
              M+ +G+
Sbjct: 479 IRRMKEEGI 487



 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/395 (35%), Positives = 217/395 (54%), Gaps = 10/395 (2%)

Query: 9    KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
            K+   G  P+++T  +L+NG C+      A++L + M      FG V  P+ VIY T+I+
Sbjct: 664  KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----DGFGFV--PNVVIYNTVIN 717

Query: 69   GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            GLCK   ++ A E+   M+ K I  D VTYN++I G   +    +A RL  +M+ + + P
Sbjct: 718  GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 777

Query: 129  NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            NV+ F+ ++D   K G + EA  L + MI+  V PN F YN+L++GFC+ G +  AK +F
Sbjct: 778  NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 837

Query: 189  VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
              M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+     TYNTL  G  + 
Sbjct: 838  DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 897

Query: 249  HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             ++  A K+F+ M   GV+ D   Y   +D LC NG I +AL +   L+  + ++DI +Y
Sbjct: 898  GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 957

Query: 309  SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
            + +I GLC++ +LK AW LF SL R  +  D + Y  MI  LC  G   +A  L   M+ 
Sbjct: 958  NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 1017

Query: 369  KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G  P    ++  +    R++ TS   EL+    E
Sbjct: 1018 DGFMPSERIYDETL----RDHYTSLSAELIKAAHE 1048



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 6/395 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K++ +G   ++ +++ LI+  CR      AL++  +M+    E      P  V + +++ 
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLH 149

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G C    +  A  L++ M      P+VV YN++I G C   + N A  L  EM  +G+  
Sbjct: 150 GFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +VVT++ ++  LC +G+  +A+++L  M++  + P+   +  L+D F   G ++ A+EL+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M       N  +Y+ +ING C +  +  A   +  M SKG  P VVTYNTL  G  + 
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             V+   KLF  M   G  AD + Y T I G C+ G +  AL++F  +   +   DI ++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             L+ GLC +G ++ A   F  +        +V YNIMIH LC   K++KA +LF  +  
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +GV PD   +  ++LG  +N    +  EL+ RM E
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 174/318 (54%), Gaps = 6/318 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA +L   +  FG  PNV+ Y+T+INGLC+      AL +F  M     + G+  + DAV
Sbjct: 692  EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM----EKKGI--RADAV 745

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y T+I GL   G    A  LL  M  + I+P+V+ + ++I  F    +  EA+ L+ EM
Sbjct: 746  TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 805

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + + V PNV T++ +++  C +G + +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 806  IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ P +VTYN L
Sbjct: 866  EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               L    ++E+A  + +++Q+  +  D   Y   I GLC+   + EA  LFR+L     
Sbjct: 926  LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 302  ELDIRSYSCLIDGLCKSG 319
            + D  +Y  +I GLC+ G
Sbjct: 986  KPDAIAYITMISGLCRKG 1003



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 178/352 (50%), Gaps = 7/352 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A +LF EM+           P  V +T ++  + K    D    L  +M++  I+ D+ +
Sbjct: 588 AFSLFCEMLQSRP------IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 641

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +  +I  FC  +  + A  L  +MM  G +P++VT   +++  C+  + +EA  L++ M 
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN  +YNT+++G C    +N A E+F  ME  G + +  +Y+ LI+G   +    
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I P V+ +  L     +   +  A  L+ EM R  V  + + Y + I
Sbjct: 762 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +G C +G + +A  +F  +    C  D+ +Y+ LI G CKS R++   +LF  +    L+
Sbjct: 822 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            D  TYN +IH  C  GK++ A  +F  M   GV+PD V +N ++L C+ NN
Sbjct: 882 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLCNN 932



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 199/448 (44%), Gaps = 53/448 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF ++   G   ++ TY+TLI+G C+ G   VAL++F  M++          PD +
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR------VTPDII 387

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ GLC  G ++ A      M++      +V YN +I G C A+   +A  LF  +
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-------------------- 161
             +GV+P+  T+++++  LCKNG   EA +L+  M + G+                    
Sbjct: 448 PVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKE 507

Query: 162 ------------RPNAF--------VYNTLMDGFC-----LTGRVNRAKELFVSMESMGC 196
                       + N F         +++ + GF      L  R N  +       S   
Sbjct: 508 ISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGAS 567

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
            H+ +   +    +C   + + A SL+ EML     P++V +  +   + ++++ +    
Sbjct: 568 HHHHYRERLRNELHCI--KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIY 625

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L+ +M+  G++ D +++   I   C+   +  AL L   +  L     I +   L++G C
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 685

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +  R + A  L  S+     + +VV YN +I+ LC +  ++ A ++F  ME KG+  D V
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +NTL+ G   +   +    LL  M +R
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKR 773



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 149/298 (50%)

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF ++    +A  LF EM+     P++V F+ ++       + E      + M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G + ++ ++  L++G+C    I  A SL 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+  G +P VV YNTL  GL +  ++  A +L +EM++ G+ AD   Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G   +A  + R +       D+ +++ LID   K G L  A EL+  + +  +  + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           N +I+ LC  G++  A   F  M +KG  P+ V +NTL+ G  +     + ++L  RM
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 197/450 (43%), Gaps = 63/450 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA- 60
           +A  LF +L   G +P+  TY+ +I GLC+ G    A    +E+I    E G++C+ +A 
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA----DELIRRMKEEGIICQMNAE 494

Query: 61  -------------------------------------VIYTTIIDGLCKEGFVDKAKELL 83
                                                + +++ + G  +  +      LL
Sbjct: 495 DDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHY------LL 548

Query: 84  LQMKDKNINPDVVT------------YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           L+   +  NP+               Y   +R   +    ++A  LF EM+     P++V
Sbjct: 549 LE---RGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIV 605

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            F+ ++  + K  K +    L   M  +G+  + + +  L+  FC   R++ A  L   M
Sbjct: 606 DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKM 665

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
             +G + ++ +   L+NG+C+    + A+SL   M   G  P VV YNT+  GL +   +
Sbjct: 666 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 725

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A ++F  M++ G+ AD   Y T I GL  +G   +A  L R +   K + ++  ++ L
Sbjct: 726 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ID   K G L  A  L+  + R  ++ +V TYN +I+  C  G +  A  +F  M +KG 
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            PD V +NTL+ G  ++      ++L   M
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 128/239 (53%), Gaps = 6/239 (2%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L+ ++      PNV TY++LING C  G    A  +F+ M++        C PD 
Sbjct: 796  LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 849

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V Y T+I G CK   V+   +L  +M  + +  D  TYN++I G+C A   N A+++F  
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+D GV P++VT+++++D LC NGK+E+A  ++E + +  +  +   YN ++ G C T +
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  A  LF S+   G K +  +Y  +I+G C+      A  L   M   G  P+   Y+
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 179/447 (40%), Gaps = 125/447 (27%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC-------------------- 56
           P++IT+  L++GLC  G    AL  F++M       G+V                     
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443

Query: 57  ---------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI---------------- 91
                    KPDA  YT +I GLCK G   +A EL+ +MK++ I                
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSS 503

Query: 92  ------------------NP------DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                             NP        + ++S ++GF         +R ++ ++++G  
Sbjct: 504 SNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGF--------VRRHYL-LLERGNN 554

Query: 128 PNVV---TFSVIMD-----ELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           P      +FS         E  +N     K ++A  L   M+Q    P+   +  ++   
Sbjct: 555 PETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVI 614

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
               + +    L+  ME++G  H+++S++ILI+ +C+   +  AL+L  +M+  G +P++
Sbjct: 615 AKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSI 674

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VT  +L  G  + ++ + A  L D M   G   +                          
Sbjct: 675 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN-------------------------- 708

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                    +  Y+ +I+GLCK+  L  A E+F+ + +  + AD VTYN +I  L   G+
Sbjct: 709 ---------VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              A  L  DM  + + P+ + F  L+
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALI 786



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 95/200 (47%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E A +L+ EM+     P++V +  L      + + E       +M+ +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  AL +   +  L  E  I ++  L+ G C   R+  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   + +     +VV YN +I  LC +G+++ A +L  +ME KG+  D V +NTL+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 386 IRNNETSKVVELLHRMDERN 405
             +   S    +L  M +R+
Sbjct: 222 CYSGRWSDAARMLRDMMKRS 241


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 225/431 (52%), Gaps = 30/431 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EAA +F  +   G +P++I+YS L++G    G  +   NLF  M               I
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           N + + G++                P+ V Y T+I  LC+ G +  A E L QM    + 
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+ V Y+S+I+GFC   D  +AK L  EMMDQG+ +PN+  FS I+  LC  G++  A  
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +  L+I IG RP+ F +N+L+DG+CL G++++A  +  +M S G + +V +YS LINGY 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  I+  L L+ EML K +KPT VTY+ +  GLF   +   A K+F EM   G A    
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    EA+ LF  L  +  + +I   + +I  L K  R + A +LF S+
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +  TY +MI  L  +G +++A  +F  ME  G AP     N ++   ++  E 
Sbjct: 755 SASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEI 814

Query: 392 SKVVELLHRMD 402
            K    + ++D
Sbjct: 815 VKAGYYMSKVD 825



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 212/397 (53%), Gaps = 7/397 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L    K  GC P+V++Y+ +I+GL   G    A NLF EM+    + GVV  P+ V Y +
Sbjct: 259 LLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMV----QKGVV--PNVVTYNS 312

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+  LCK   +DKA+ +L QM D +I PD VTY ++I G+       EA ++F EM  +G
Sbjct: 313 IVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG 372

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P++VTF+ +MD LCK+ + +EA+++   +   G +P+   Y+ L+ G+   GR     
Sbjct: 373 LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMN 432

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF SM   G   +   ++ILIN + K   ++ AL +++EM  +G+ P VVTY T+   L
Sbjct: 433 NLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC-ELD 304
             + ++  A +   +M   G+  +T  Y + I G C +G +++A EL   +        +
Sbjct: 493 CRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPN 552

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I  +S +I  LC  GR+  A ++F+ +       D+ T+N +I   C  GKMDKA  +  
Sbjct: 553 ITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLD 612

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M + G  PD V ++TL+ G  ++      + L   M
Sbjct: 613 AMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 201/403 (49%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  PNV+TY+++++ LC+      A  +  +M + +       +PD V
Sbjct: 290 KACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS------IQPDEV 343

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G    G   +A ++  +M  + + PD+VT+NS++   C    S EA  +F  +
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+++++S+++      G+  + + L   M   G+  ++  +N L++     G +
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  M   G   NV +Y+ +I   C+   +  A+   S+M+S G+KP  V Y++L
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSL 523

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM   G+   +   + + I  LC  G ++ A ++F  +  + 
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +++ LIDG C  G++  A+ +  ++       DVVTY+ +I+     G++D   
Sbjct: 584 DRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M  K V P  V ++ ++ G  R   TS   ++ H M E
Sbjct: 644 ILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 187/390 (47%), Gaps = 42/390 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +FT+++  G  PNV+TY+T+I  LCR G    A+    +MI+      +  KP+ V
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS------IGLKPNTV 518

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------------ 91
           +Y ++I G C  G + KAKEL+ +M D+ I                              
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578

Query: 92  ------NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                  PD+ T+NS+I G+C     ++A  +   M+  G +P+VVT+S +++   K+G+
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++   L   M+   V+P    Y+ ++DG    GR + AK++F  M   G   ++ +Y+I
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI 698

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++ G C+N   + A++L+ ++ +  +K  +   NT+   L+++ + E A  LF  +   G
Sbjct: 699 ILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASG 758

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y   I  L K G + EA  +F ++    C    R  + +I  L + G +  A 
Sbjct: 759 LVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAG 818

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                +   ++  +  T +++I    + G+
Sbjct: 819 YYMSKVDGTIISLEASTTSLLISLFASKGR 848



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++D  C+    D       ++    +  D +  N+ ++  CYA  ++EA  + +  M
Sbjct: 168 YGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRM 227

Query: 123 DQ-GVQPNVVTFSVIMDELCKNGKMEEA-SQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + G  P+  +++ ++  LC   + +EA   LL +    G  P+   Y  ++ G  + G 
Sbjct: 228 SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  LF  M   G   NV +Y+ +++  CK + ++ A  +  +M    I+P  VTY  
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G   + + + A K+F EM R G+  D   + + +D LCK+    EA E+F ++    
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + DI SYS L+ G    GR      LFHS+    ++AD   +NI+I+A    G MD+A 
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +F +M  +GV+P+ V + T++    R    +  +E L +M
Sbjct: 468 LIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 7/297 (2%)

Query: 114 AKRLFIEMMDQGVQPNVV-----TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           A  LF  +  +   P VV     T+ ++MD  C+  + +        +++ G+R +  V 
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 169 NTLMDGFCLTGRVNRAKELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           NT +   C   R + A  + +  M  +GC  + FSY+ +I   C     + AL +   M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 228 -SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              G  P VV+Y  +  GLF   ++ +A  LF+EM + GV  +   Y + +  LCK   +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A  + R +     + D  +Y+ +I G    GR K A ++F  + R  LI D+VT+N +
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +LC   +  +A ++F  +  KG  PD ++++ L+ G         +  L H M +
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A  +F  +   G  P++ T+++LI+G C  G    A  + + M++   E      PD 
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE------PDV 623

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G  K G +D    L  +M  K + P  VTY+ V+ G   A  ++ AK++F E
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ T+++I+  LC+N   +EA  L   +  + ++    + NT++       R
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF S+ + G   N  +Y ++I    K   +E A  ++S M   G  P+    N 
Sbjct: 744 REEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLND 803

Query: 241 LFIGLFEIHQVERA 254
           +   L +  ++ +A
Sbjct: 804 IIRMLLQKGEIVKA 817


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 228/431 (52%), Gaps = 30/431 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  +F  +   G  P++++YS L++G    G      NLF  M               I
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           + + + G++               +PD V Y+T+I   C+ G +  A E   QM    + 
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+ V Y+S+I GFC   D  +AK L  EMM +G+ +PN+V FS I+  LC  G++ +A  
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +  L+I IG RP    +N+L+DG+CL G++ +A  +  +M S+G + +V +Y+ L++GYC
Sbjct: 567 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYC 626

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+ +I+  L L+ EML K +KPT VTY+ +  GLF   +   A K+F EM   G A D  
Sbjct: 627 KSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDID 686

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y+  + GLC+N    EA+ LF  L  + C+ DI   + +I+ L K  R + A +LF ++
Sbjct: 687 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAI 746

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +V TY +MIH L  +G +++A  +F  ME  G AP     N ++   ++  + 
Sbjct: 747 STSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 806

Query: 392 SKVVELLHRMD 402
            K    + ++D
Sbjct: 807 VKAGYYMSKVD 817



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 198/380 (52%), Gaps = 5/380 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PN I+Y+T+I  LC    +  AL++ + M    G     C PD V + T
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNT 269

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  K+G V KA  L+ +M  K + PDVVTYNS++   C A   ++A+ +  +M+D+G
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+ +T++ I+     +G  +E++++   M   G+ P    +N+ M   C  GR   A+
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F  M + G   ++ SYSIL++GY          +L+  M  KGI      +N L    
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A  +F EMQ  GV  D   Y T I   C+ G + +A+E F  +  +  E + 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             Y  LI G C  G L  A EL    + +G+   ++V ++ +IH+LC +G++  AHD+F 
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            +   G  P  V FN+L+ G
Sbjct: 570 LVIHIGDRPTIVTFNSLIDG 589



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 207/452 (45%), Gaps = 77/452 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G EP+V+TY+++++ LC+      A  +  +M++   E      PD +
Sbjct: 282 KACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE------PDGL 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II G    G   ++ ++  +M  K + P +VT+NS +   C    S +A+ +F  M
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395

Query: 122 MDQGVQPNVVTFSVI------------MDEL-----------------------CKNGKM 146
             +G  P++V++S++            M+ L                        K G M
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA  +   M   GVRP+   Y+TL+  FC  GR+  A E F  M S+G + N   Y  L
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515

Query: 207 INGYCKNKEIEGALSLYSEMLSKGI----------------------------------- 231
           I+G+C + ++  A  L SEM+SKGI                                   
Sbjct: 516 IHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIG 575

Query: 232 -KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +PT+VT+N+L  G   + ++E+AF + D M   G+  D   Y T + G CK+G I + L
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            LFR +   K +    +YS ++DGL  +GR   A ++FH +       D+ TY I++  L
Sbjct: 636 ILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL 695

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           C +   D+A  LF  + A     D    NT++
Sbjct: 696 CRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 185/390 (47%), Gaps = 42/390 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +FT+++  G  P+V+TYSTLI+  CR G    A+  F +MI+      +  +P+ V
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMIS------IGLEPNTV 510

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------------ 91
           +Y ++I G C  G + KAKEL+ +M  K I                              
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570

Query: 92  ------NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                  P +VT+NS+I G+C      +A  +   M+  G++P+VVT++ ++   CK+GK
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++   L   M+   V+P    Y+ ++DG    GR + AK++F  M   G   ++ +Y I
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKI 690

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C+N   + A++L+ ++ +   K  +   NT+   L+++ + E A  LF  +   G
Sbjct: 691 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y   I  L K G + EA  +F ++    C    R  + +I  L + G +  A 
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAG 810

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                +   ++  +  T ++++    + GK
Sbjct: 811 YYMSKVDGTIISLEASTTSLLMSLFSSKGK 840



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 171/372 (45%), Gaps = 22/372 (5%)

Query: 21  TYST-----LINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           T+ST     L + L R G  +   ALN F   +       V C     +   + + +C+E
Sbjct: 87  TFSTDDAHHLFDELLRQGTPVHNPALNGFLAAL-ARAPDSVSCSNGPALVLALFNRICRE 145

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
               +   L            V TY  ++   C A   +     F  ++  G++   +  
Sbjct: 146 EAGPRVAPL-----------SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEA 194

Query: 134 SVIMDELCKNGKMEEASQ-LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +  +  LC   + +EA   LL  M  +G  PNA  YNT++   C   R   A ++   M 
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254

Query: 193 SMG--CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
             G  C  +V S++ +I+G+ K  E+  A +L +EM+ KG++P VVTYN++   L +   
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARA 314

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +++A  +  +M   GV  D   Y   I G   +G+  E+ ++FR +        I +++ 
Sbjct: 315 MDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNS 374

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
            +  LCK GR K A E+F  +     + D+V+Y+I++H    +G+    ++LF  M  KG
Sbjct: 375 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434

Query: 371 VAPDCVAFNTLM 382
           +  +C  FN L+
Sbjct: 435 IVANCHCFNILI 446



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 4/283 (1%)

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           V P +V T+ ++MD  C+  + +        +++ G+R      NT +   C   R + A
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 185 KELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PTVVTYNTL 241
            ++ +  M  +GC  N  SY+ +I   C +   + AL +   M  +G +  P VV++NT+
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  +V +A  L +EM + GV  D   Y + +D LCK   + +A  + R +     
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ +I G   SG  K + ++F  +    LI  +VT+N  + +LC  G+   A +
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M  KG  PD V+++ L+ G       + +  L H M ++
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F  +   G  P ++T+++LI+G C  G    A  + + M++      V  +PD 
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS------VGIEPDV 615

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G CK G +D    L  +M  K + P  VTY+ V+ G  +A  ++ AK++F E
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G   ++ T+ +++  LC+N   +EA  L   +  +  + +  + NT+++      R
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   NV +Y ++I+   K   +E A +++S M   G  P+    N 
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 795

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + +A
Sbjct: 796 IIRMLLQKGDIVKA 809



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 56/208 (26%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEALELFRTLRILKC 301
             + A  LFDE+ R G      A   F+  L        C NG  +  L LF   RI + 
Sbjct: 89  STDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPAL-VLALFN--RICRE 145

Query: 302 E-------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL------------------ 336
           E       L + +Y  L+D  C++ R  +    F  L R  L                  
Sbjct: 146 EAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAK 205

Query: 337 ------------------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VAPDCV 376
                             + + ++YN +I +LC D +  +A D+   M  +G   +PD V
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 265

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           +FNT++ G  +  E SK   L++ M ++
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQK 293


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 217/404 (53%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  +   ++   G  P+  T+++L+NGLCR GH   AL + + M+    +      PD  
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD------PDIF 352

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK G V++A E+L QM  ++ +P+ VTYN++I   C  N   EA  L   +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V TF+ ++  LC       A +L E M   G  P+ F YN L+D  C  GR+
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   MES GC  NV +Y+ LI+G+CKNK IE A  ++ EM  +GI   VVTYNTL
Sbjct: 473 EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTL 532

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +VE A +L D+M   G+  D + Y + +   C+ G I +A ++ +T+    C
Sbjct: 533 IDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGC 592

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y  LI GL K+GR+++A  L  ++    ++    TYN +I AL  + +  +A  
Sbjct: 593 EPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVR 652

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDER 404
           LF +M  KG  PD V +  +  G C       + V+ L  M ++
Sbjct: 653 LFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696



 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 209/394 (53%), Gaps = 6/394 (1%)

Query: 8   TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII 67
           +++ + G +P+V T++ LI  LCR      A+ + EEM    G +G+   PD   +TT++
Sbjct: 200 SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM----GSYGL--SPDEKTFTTLM 253

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
            G  +EG ++ A  +  QM         VT N ++ G+C      E      EM ++G +
Sbjct: 254 QGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFR 313

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  TF+ +++ LC+ G ++ A ++L++M+Q G  P+ F YN+L+ G C  G V  A E+
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M       N  +Y+ LI+  CK  ++E A  L   + SKGI P V T+N+L  GL  
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
            +    A +LF+EM+  G   D + Y   ID LC  G + EAL L + +    C  ++ +
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LIDG CK+ R++ A E+F  +    +  +VVTYN +I  LC + ++++A  L   M 
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +G+ PD   +N+L+    R  +  K  +++  M
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 199/399 (49%), Gaps = 10/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G  P+  T++TL+ G    G+   AL + E+M+         C    V 
Sbjct: 230 AILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG------CPSSNVT 283

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              ++ G CKEG +++    + +M ++   PD  T+NS++ G C       A  +   M+
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P++ T++ ++  LCK G++EEA ++L  MI     PN   YNTL+   C   +V 
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   + S G   +V +++ LI G C       A+ L+ EM +KG  P   TYN L 
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    ++E A  L  EM+  G + +   Y T IDG CKN  I EA E+F  + +    
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ LIDGLCK+ R++ A +L   +    L  D  TYN ++   C  G + KA D+
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M + G  PD V + TL+LG  +       VEL  R+
Sbjct: 584 VQTMTSNGCEPDSVTYGTLILGLSKAGR----VELASRL 618



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + +  TY+ L+N L   G+ +  + +    +   G      KPD   +  +I  LC+
Sbjct: 170 FGLKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRG-----IKPDVTTFNILIKALCR 223

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              +  A  ++ +M    ++PD  T+ ++++GF    + N A R+  +M+  G   + VT
Sbjct: 224 AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVT 283

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V++   CK G++EE    ++ M   G RP+ F +N+L++G C  G V  A E+   M 
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   ++F+Y+ LI G CK  E+E A+ + ++M+ +   P  VTYNTL   L + +QVE
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L   +   G+  D   + + I GLC       A+ELF  ++   C  D  +Y+ LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  GRL+ A  L   +       +VVTYN +I   C + ++++A ++F +ME +G++
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + V +NTL+ G  +N    +  +L+ +M
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 11/400 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRT---GHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           +  ++K  GCE    T+  LI    +       +  +++ EE      EFG+  K DA  
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEE------EFGL--KLDAFT 178

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++ L     +   + +  +M  + I PDV T+N +I+  C A+    A  +  EM 
Sbjct: 179 YNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG 238

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  TF+ +M    + G M  A ++ E M+  G   +    N L+ G+C  GR+ 
Sbjct: 239 SYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIE 298

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
                   M + G + + F+++ L+NG C+   ++ AL +   ML +G  P + TYN+L 
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL ++ +VE A ++ ++M     + +T  Y T I  LCK   + EA EL R L      
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 418

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +++ LI GLC +   ++A ELF  +       D  TYN++I +LC+ G++++A  L
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             +ME+ G + + V +NTL+ G  +N    +  E+   M+
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 36/381 (9%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK---------------------------- 89
           P +VIY  ++  L K+G     + +L +MK                              
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 90  --------NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
                    +  D  TYN ++      N     + +   M+ +G++P+V TF++++  LC
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           +  ++  A  ++E M   G+ P+   + TLM GF   G +N A  +   M + GC  +  
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + ++L++GYCK   IE  LS   EM ++G +P   T+N+L  GL  I  V+ A ++ D M
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + G   D + Y + I GLCK G + EA+E+   + +     +  +Y+ LI  LCK  ++
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A EL   L    ++ DV T+N +I  LC       A +LF +M+ KG  PD   +N L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 382 MLGCIRNNETSKVVELLHRMD 402
           +          + + LL  M+
Sbjct: 463 IDSLCSRGRLEEALSLLKEME 483



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   + + GCEP+ +TY TLI GL + G   +A  L   +       G+V  P   
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK----GMVLAPQT- 633

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIE 120
            Y  +I  L +E    +A  L  +M +K   PD VTY  V RG C       EA    +E
Sbjct: 634 -YNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVE 692

Query: 121 MMDQGVQPNVVTFSVIMDELC 141
           M D+G  P+  +F ++ + LC
Sbjct: 693 MTDKGFLPDFSSFLMLAEGLC 713


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/372 (36%), Positives = 211/372 (56%), Gaps = 6/372 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G EP+++T+ +L+NG CR      AL +F+ M+    E G   +P+ VI
Sbjct: 135 ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV----EMGY--EPNVVI 188

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDGLCK   VD A +LL +M+   I PD VTYNS+I G C +   ++A R+   M 
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+V TF+ ++D   K G++ EA +L E MI+  + P+   Y+ L+ G C+  R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++F  M S GC  +V +YSILINGYCK+K++E  + L+ EM  +G+    VTY  L 
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     ++  A ++F  M   GV  +   Y   + GLC NG I +AL +   ++    +
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMD 428

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +Y+ +I G+CK+G +  AW+L+ SL    L  D+ TY  M+  L   G   +A  L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADAL 488

Query: 363 FLDMEAKGVAPD 374
           F  M+  G+ P+
Sbjct: 489 FRKMKEDGILPN 500



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 211/398 (53%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+ +++  G   N+ T + L+N  CR     +AL+   +M+    E      PD V + +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHE------PDIVTFGS 156

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++G C+   +  A  +  +M +    P+VV YN++I G C +   + A  L   M   G
Sbjct: 157 LLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG 216

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+ VT++ ++  LC +G+ ++A++++  M +  + P+ F +N L+D     GR++ A+
Sbjct: 217 IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAE 276

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL+  M       ++ +YS+LI G C    ++ A  ++  M+SKG  P VVTY+ L  G 
Sbjct: 277 ELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGY 336

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +VE   KLF EM + GV  +T  Y   I G C+ G +  A E+F+ +       +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNI 396

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L+ GLC +G+++ A  +   + +  + AD+VTYNI+I  +C  G++  A DL+  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCS 456

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  KG+ PD   +  +MLG  +     +   L  +M E
Sbjct: 457 LNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 186/331 (56%), Gaps = 8/331 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +F ++   G EPNV+ Y+T+I+GLC++     AL+L   M ++G        +PDA
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG-------IRPDA 221

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++I GLC  G  D A  ++  M  + I PDV T+N++I         +EA+ L+ E
Sbjct: 222 VTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEE 281

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P++VT+S+++  LC   +++EA Q+   M+  G  P+   Y+ L++G+C + +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    +LF  M   G   N  +Y++LI GYC+  ++  A  ++  M+  G+ P ++TYN 
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++E+A  +  +MQ+ G+ AD   Y   I G+CK G + +A +L+ +L +  
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
              DI +Y+ ++ GL K G    A  LF  +
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 189/368 (51%), Gaps = 10/368 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVI--YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
           +L+LF  M+         C+P   I  ++ ++  + K    D    L  QM+   I  ++
Sbjct: 65  SLDLFFHMVQ--------CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
            T N ++  FC  +  + A     +MM  G +P++VTF  +++  C+  ++ +A  + + 
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDR 176

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+++G  PN  +YNT++DG C + +V+ A +L   ME  G + +  +Y+ LI+G C +  
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + A  + S M  + I P V T+N L     +  ++  A +L++EM R  +  D   Y  
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I GLC    + EA ++F  +    C  D+ +YS LI+G CKS +++   +LF  + +  
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           ++ + VTY ++I   C  GK++ A ++F  M   GV P+ + +N L+ G   N +  K +
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416

Query: 396 ELLHRMDE 403
            +L  M +
Sbjct: 417 VILADMQK 424



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 162/326 (49%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D + +L   M      P +  ++ ++         +    L+ +M   G+  N+ T ++
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C+  ++  A   L  M+++G  P+   + +L++GFC   R+  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + NV  Y+ +I+G CK+K+++ AL L + M   GI+P  VTYN+L  GL    + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++   M +  +  D + +   ID   K G I EA EL+  +     + DI +YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C   RL  A ++F  +       DVVTY+I+I+  C   K++    LF +M  +GV  + 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V +  L+ G  R  + +   E+   M
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWM 387



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 152/293 (51%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +++  LF  M+     P++  FS ++  + K  K +    L E M  +G+  N    N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A      M  +G + ++ ++  L+NG+C+   I  AL ++  M+  G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P VV YNT+  GL +  QV+ A  L + M+  G+  D   Y + I GLC +G   +A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   +   +   D+ +++ LID   K GR+  A EL+  + R  L  D+VTY+++I+ LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ++D+A  +F  M +KG  PD V ++ L+ G  ++ +    ++L   M +R
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 39/271 (14%)

Query: 139 ELCKNG----KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           E+ +NG    K++++  L   M+Q    P+   ++ L+       + +    L+  M+ +
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G  HN+ + +IL+N +C+  ++  ALS   +M+  G +P +VT                 
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVT----------------- 153

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                             + + ++G C+   I +AL +F  +  +  E ++  Y+ +IDG
Sbjct: 154 ------------------FGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDG 195

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCKS ++  A +L + +    +  D VTYN +I  LC  G+ D A  +   M  + + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPD 255

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              FN L+  C++    S+  EL   M  R+
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRS 286


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/388 (35%), Positives = 215/388 (55%), Gaps = 27/388 (6%)

Query: 5   ALFTKLKAFGCEPNVIT-------------YSTLINGLCRTGHTIVALNLFEEMINGNGE 51
           ++F  +   G +PNVIT             Y TLINGLC+ G    AL L   +      
Sbjct: 116 SVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD----- 170

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G + +P+ V+Y TIID +CK   V++A +L  +M  + I+PDVVTY+++I GF      
Sbjct: 171 -GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKL 229

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            +A  LF +M+ + ++P+V TF++++D  CK+GKM+E   +  +M++ G++PN   Y +L
Sbjct: 230 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 289

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           MDG+CL  +VN+A  +F +M   G   +  SY+I+ING+CK K+++ A++L+ +M  K I
Sbjct: 290 MDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTY +L  GL +  ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ 
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 292 L--------FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           L        F  L +    LD+ +Y+ +I G C  G    A  L   +     I D  TY
Sbjct: 410 LLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGV 371
            I+I +L    + D A  L  +M A+G+
Sbjct: 470 EIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 194/402 (48%), Gaps = 56/402 (13%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L K      A  L  QM+ K I  ++VT N +I  F     +  +  +
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 118 FIEMMDQGVQPNVVT-------------FSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           F  ++ +G  PNV+T             +  +++ LCK G+   A QLL  +    V+PN
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMG----------------------------- 195
             +YNT++D  C    VN A +L+  M S G                             
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237

Query: 196 ------CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                  K +V++++IL++G+CK+ +++   ++++ M+ +GIKP VVTY +L  G   + 
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           QV +A  +F+ M + GV  DT +Y   I+G CK   + EA+ LF+ +       ++ +Y+
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA--------HD 361
            LIDGLCKSG++  A +L   +    +  D++TY+ ++ ALC + ++DKA          
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +F D+  KG   D  A+  ++ G       ++ + LL +M++
Sbjct: 418 VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMED 459



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 34/336 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L++++ + G  P+V+TYS LI+G    G    A++LF +MI  N       KPD  
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN------IKPDVY 249

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++DG CK+G + + K +   M  + I P+VVTY S++ G+C     N+A  +F  M
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+  +++++++  CK  K++EA  L + M    + PN   Y +L+DG C +G++
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   ++ +YS +++  CKN +++ A++L +++               
Sbjct: 370 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD------------- 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                         ++F+++   G   D +AY   I G C  G   EAL L   +     
Sbjct: 417 --------------QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGR 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             D ++Y  +I  L K     +A +L   +  RG+L
Sbjct: 463 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 165/377 (43%), Gaps = 61/377 (16%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII    +   V     LL Q   KN  P +  +  ++      N  + A  L  +M 
Sbjct: 32  YITIIKN-DEHNLVSSFNRLLHQ---KNPTPPIFEFGKILGSLVKINCYHTAISLHRQME 87

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+  N+VT +++++   + G+   +  +   +++ G  PN     TL+ G CL     
Sbjct: 88  LKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK---- 143

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
                              SY  LING CK  +   AL L   +  K ++P VV YNT+ 
Sbjct: 144 ------------------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTII 185

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             + ++  V  AF L+ EM   G++ D   Y   I G    G + +A++LF  + +   +
Sbjct: 186 DSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIK 245

Query: 303 LDIRSYSCLIDGLCKSGRLK-----------------------------------IAWEL 327
            D+ +++ L+DG CK G++K                                    A  +
Sbjct: 246 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 305

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F+++ +G +  D  +YNIMI+  C   K+D+A +LF  M  K + P+ V + +L+ G  +
Sbjct: 306 FNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK 365

Query: 388 NNETSKVVELLHRMDER 404
           + + S  ++L+  M +R
Sbjct: 366 SGKISYALKLVDEMHDR 382


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/403 (36%), Positives = 218/403 (54%), Gaps = 24/403 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      + A G   N ++Y  LINGLC+ G T  AL +  ++       G +   + V
Sbjct: 136 EALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID------GKLVNTNVV 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+TIID LCKE  V +A EL  QM  K ++PDVVT++++I GFC      EA  LF EM
Sbjct: 190 MYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P+V TF++++D LCK G  +E   +L +M++                     +V
Sbjct: 250 VLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMK------------------EVNQV 291

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+AK +F  +       +V SY+I+I   CK K ++ ALSL++EM  KGI P  VTY++L
Sbjct: 292 NKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSL 351

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A++L D+M   G  AD   Y +F+  LCKN  + +A+ L + ++    
Sbjct: 352 IDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI 411

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +I +Y+ LIDGLCK GR + A  +F  L        V TYNIMI+ LC +G  D+A  
Sbjct: 412 QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMT 471

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G  PD V + T++    +N+E  K  +LL  M  R
Sbjct: 472 LLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 200/402 (49%), Gaps = 25/402 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT--IVALNLFEEMINGNGEFGVVCKPD 59
           +A + F ++      P++I ++ ++  L ++ +    +A++L+  +     +   +  P 
Sbjct: 29  DAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRL-----QLNAIT-PS 82

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V + T+I+  C  G +D A  +L ++     +PD +T  ++I+G C     +EA     
Sbjct: 83  IVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD 142

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            ++ +G + N V++ ++++ LCK G+   A Q+L  +    V  N  +Y+T++D  C   
Sbjct: 143 HVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK 202

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V  A EL+  M       +V ++S LI G+C   + + A  L+ EM+   I P V T+N
Sbjct: 203 LVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFN 262

Query: 240 TLF-----------------IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
            L                  + + E++QV +A  +F+ + +  V  D  +Y   I  LCK
Sbjct: 263 ILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCK 322

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              + EAL LF  +R      D  +YS LIDGLCKS R+  AWEL   +      ADV+T
Sbjct: 323 IKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVIT 382

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           Y   +HALC + ++DKA  L   ++ +G+ P+   +N L+ G
Sbjct: 383 YTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDG 424



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 19/348 (5%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE--AKRLFIEMMDQGVQPNVVTF 133
           V  A     +M   N +P ++ +N ++     +N++N   A  L+  +    + P++VTF
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++  C  G+M+ A  +L  ++++G  P+     TL+ G CL G+V+ A      + +
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + N  SY ILING CK  E   AL +  ++  K +   VV Y+T+   L +   V  
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A++L+ +M    V+ D   +   I G C  G   EA  LF  + +     D+ +++ L+D
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 314 GLCKSGRLK-----------------IAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            LCK G  K                  A  +F+ + +  +  DV +Y I+I  LC    +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A  LF +M  KG+ PD V +++L+ G  ++   S   ELL +M  R
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHAR 374



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 11/284 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-------FGV 54
           EA  LF ++      P+V T++ L++ LC+ G T    N+   M+    +       F +
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300

Query: 55  VCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           + K    PD   YT II  LCK   VD+A  L  +M+ K I PD VTY+S+I G C +  
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            + A  L  +M  +G   +V+T++  +  LCKN ++++A  L++ +   G++PN   YN 
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+DG C  GR   A+ +F  +   G K  V++Y+I+ING C     + A++L  +M   G
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             P VVTY T+   LF+  +  +A KL  EM   G+  +    R
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/434 (33%), Positives = 230/434 (52%), Gaps = 44/434 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
            +A  L ++LK+FG +P+ +TY+ L++GL ++G T  A+ + EEM+       VV      
Sbjct: 690  DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 56   --------------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                                      C P+ V Y+ +I+GLCK G +D+A+EL+ +M  K
Sbjct: 750  DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 90   NIN--PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG--VQPNVVTFSVIMDELCKNGK 145
            + +  P+++TYNS + G C  +   EA  L   + D    V P+ VTFS ++D LCK G+
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 146  MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             +EA  + + MI  G  PN   YN LM+G C T ++ RA  +  SM   G   +V +YS+
Sbjct: 870  TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ-RH 264
            L++ +CK   ++ AL L   M S+G  P VVT+N++  GL +  Q   AF++FD+M  +H
Sbjct: 930  LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+A D   Y T IDGL + G+  +A  L   +     + D  +++C I+GL K G +  A
Sbjct: 990  GLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRA 1045

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                H +    L+ D VT+NI+I   C  G  ++A  LF +M AK + PD + F  L+ G
Sbjct: 1046 ---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 1102

Query: 385  CIRNNETSKVVELL 398
              +  +     +++
Sbjct: 1103 LCKAGQVEATWDIM 1116



 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 235/471 (49%), Gaps = 68/471 (14%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----------INGN 49
           EA  +F  +    G  P+ ITY TLI+GL RTG    A  L + M           ING 
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 50  GEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
            + G V +              PD V +  +I G CK G  ++A  L  +M  KN+ PDV
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           +T+ ++I G C A     A+ +   M + GV PNVVT++ ++  LCK+G++EEA Q LE 
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  P++  Y +L+   C   R + A +L   ++S G   +  +Y+IL++G  K+ +
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFI-------------------------------- 243
            E A+++  EM+ KG  P VVTYNTL                                  
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 244 ------GLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                 GL ++ +++ A +L  EM R    V  +   Y +F+DGLCK   + EA EL R+
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 296 LR--ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
           LR   L+   D  ++S LIDGLCK G+   A  +F  +  G  + +VVTYN++++ LC  
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            KM++AH +   M  KGV PD + ++ L+    + +   + +ELLH M  R
Sbjct: 903 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 224/401 (55%), Gaps = 15/401 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +L   G  P+V+TY+TLI+ LC+ G    A  L  +M + +      C P+ V Y+ 
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS------CVPNVVTYSV 291

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN--PDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           +I+GLCK G +D+A+EL+ +M  K+ +  P+++TYNS + G C  + + EA  L   + D
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 124 QG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+ VTFS ++D LCK G+++EA  + + MI  G  PN   YN L++G C   ++
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P VVT+N++
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 242 FIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             GL +  +   AF++FD+M  +HG+  D   Y T IDGL + G   +A  L   +    
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP--- 528

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  +++C I+GL K G +  A ++++ +    L+ D VT+NI+I   C  G  ++A 
Sbjct: 529 -DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQAS 587

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF +M AK + PD + F  L+ G  +  +     ++L  M
Sbjct: 588 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628



 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 137/403 (33%), Positives = 219/403 (54%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + +  C PNV+TYS LINGLC+ G    A  L +EM   + +      P+ +
Sbjct: 269 EARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 324

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN--INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y + +DGLCK+    +A EL+  ++D +  ++PD VT++++I G C     +EA  +F 
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNV+T++ +++ LCK  KME A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTY 238
           RV+ A EL   M S GC  NV +++ +I+G CK+     A  ++ +M L  G+ P  +TY
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  GLF   +  +A  L D M       DT+A+   I+GL K G +  AL+++  +  
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLE 560

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L+   D  +++ LI G CK+G  + A  LF  +    L  DV+T+  +I  LC  G+++ 
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 620

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A D+   M   GV P+ V +N L+ G  ++    +  + L  M
Sbjct: 621 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 228/408 (55%), Gaps = 15/408 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ALF ++ A   +P+V+T+  LI+GLC+ G    A ++ + M    G  GV   P+ V
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM----GNLGV--PPNVV 638

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCK G +++A + L +M      PD +TY S++   C A+ +++A +L  E+
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ VT+++++D L K+G+ E+A  +LE M+  G  P+   YNTL+D  C  G +
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 182 NRAKELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPTVV 236
             A+ L   M S     C  NV +YS+LING CK   I+ A  L  EM+ K   + P ++
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGYIVEALELF 293
           TYN+   GL +   +  A +L   + R G   V+ DT  + T IDGLCK G   EA  +F
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +       ++ +Y+ L++GLCK+ +++ A  +  S+    +  DV+TY++++ A C  
Sbjct: 878 DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +D+A +L   M ++G  P+ V FN+++ G  +++++ +  ++   M
Sbjct: 938 SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 223/443 (50%), Gaps = 48/443 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA     ++ + GC P+ ITY +L+  LCR   T  AL L  E+ +    FG    PD V
Sbjct: 655  EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS----FGW--DPDTV 708

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++DGL K G  ++A  +L +M  K  +PDVVTYN++I   C A D  EA+RL  +M
Sbjct: 709  TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768

Query: 122  MDQGVQ---PNVVTFSVIMDELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFC 176
              +  +   PNVVT+SV+++ LCK G+++EA +L++ M++    V PN   YN+ +DG C
Sbjct: 769  SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828

Query: 177  LTGRVNRAKELFVSME--SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                +  A EL  S+   S+    +  ++S LI+G CK  + + A +++ +M++ G  P 
Sbjct: 829  KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 235  VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VVTYN L  GL +  ++ERA  + + M   GV  D   Y   +D  CK  ++ EALEL  
Sbjct: 889  VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 295  TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTY---------- 343
             +    C  ++ +++ +IDGLCKS +   A+++F  +  +  L  D +TY          
Sbjct: 949  GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRT 1008

Query: 344  ---------------------NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
                                 N  I+ L   G + +A    L++E   + PD V FN L+
Sbjct: 1009 GWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILI 1065

Query: 383  LGCIRNNETSKVVELLHRMDERN 405
             G  +     +   L   M  +N
Sbjct: 1066 AGACKAGNFEQASALFEEMVAKN 1088



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 206/443 (46%), Gaps = 52/443 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF       C PN  TYSTL+    + G  +       E   G             
Sbjct: 129 KAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDV-------ERTLGFFRRIRSSSRSVA 181

Query: 62  IYTTIIDGLCKEGFVDKAKELLL-QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  ++  LC+ G   +A E+   +M    + P +VTYN++I G C +N+      LF E
Sbjct: 182 DYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 241

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++++G  P+VVT++ ++D LCK G +EEA +L   M      PN   Y+ L++G C  GR
Sbjct: 242 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR 301

Query: 181 VNRAKELFVSMESMGCK-------HNVF-------------------------------- 201
           ++ A+EL   M    C        +N F                                
Sbjct: 302 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 361

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           ++S LI+G CK  +I+ A S++ +M++ G  P V+TYN L  GL +  ++ERA  + + M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              GV  D   Y   +D  CK   + EALEL   +    C  ++ +++ +IDGLCKS R 
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 322 KIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
             A+++F  +  +  L+ D +TY  +I  L   G+  +A  L   M      PD  AFN 
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNC 537

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
            + G  +  + S+ +++ +RM E
Sbjct: 538 CINGLSKLGDVSRALQVYNRMLE 560



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 176/340 (51%), Gaps = 6/340 (1%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L K G   KA +L          P+  TY++++R   Y    +  + L      +    +
Sbjct: 121 LVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRA-TYKAGGDVERTLGFFRRIRSSSRS 179

Query: 130 VVTFSVIMDELCKNGKMEEASQLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           V  +++++  LC+ G+   A ++    M + GV P    YNT+++G C +  +    ELF
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             +   G   +V +Y+ LI+  CK  ++E A  L+ +M S+   P VVTY+ L  GL ++
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 249 HQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTLR--ILKCELD 304
            +++ A +L  EM R    V  +   Y +F+DGLCK     EA EL R+LR   L+   D
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             ++S LIDGLCK G++  A  +F  +  G  + +V+TYN +++ LC   KM++AH +  
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M  KGV PD + ++ L+    + +   + +ELLH M  R
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 459



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 6/214 (2%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVER 253
           G KH +FS++  +N   K+     A+ L+   L    +P   TY+TL    ++    VER
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 254 AFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEALELFR-TLRILKCELDIRSYSCL 311
               F  ++      AD   Y   +  LC+ G    ALE+FR  +        I +Y+ +
Sbjct: 166 TLGFFRRIRSSSRSVAD---YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTI 222

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCKS  L    ELF  L       DVVTYN +I +LC  G +++A  L  DM ++  
Sbjct: 223 INGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSC 282

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P+ V ++ L+ G  +     +  EL+  M  ++
Sbjct: 283 VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 316


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 211/386 (54%), Gaps = 9/386 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+V+TY+ L+  +C++     A+N+ +EM    G     C P+ V Y  II+G+C+E
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM-RAKG-----CTPNIVTYNVIINGMCRE 235

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD AKE+L ++      PD+V+Y +V++G C A   ++ K LF EM+D+   PN VTF
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +++   C+ G +E A Q+L+ M Q G  PN  + N +++  C  GRV+ A +   +M  
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  +  SY+ ++ G C+    E A  L  EM+ K   P  VT+NT    L +   +E+
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KL + M  +G +     Y   + G C  G +  ALELF     L CE +  +Y+ L+ 
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLLT 472

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC + RL  A EL   + +     + VT+N+++   C  G +++A +L   M   G  P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLH 399
           + + FNTL+ G  ++  + + +ELLH
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLH 558



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 195/379 (51%), Gaps = 9/379 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + ++M     + G  C P+  +   
Sbjct: 279 LFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM----SQHG--CTPNTTLCNI 332

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A + L  M     NPD ++Y +V+RG C A     AK L  EM+ + 
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A +L+ELM + G       YN L+ GFC+ GRV+ A 
Sbjct: 393 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 452

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF    ++ C+ N  +Y+ L+ G C  + ++ A  L +EM+ K      VT+N L    
Sbjct: 453 ELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFF 509

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   VE A +L ++M  HG   +   + T +DG+ K+    EALEL   L      LD 
Sbjct: 510 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 569

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS ++D L +  R + A ++ H++    +   V  YN ++ ALC   + D+A D F  
Sbjct: 570 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 629

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M + G  P+   +  L+ G
Sbjct: 630 MVSNGCMPNESTYIILIEG 648



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 3/320 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M  +   P VVTY  ++   C ++   EA  +  EM  +G  PN+VT++VI++ +C+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A ++L  +   G +P+   Y T++ G C   R +  K LF  M    C  N  ++ +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+  +C+   +E A+ +  +M   G  P     N +   + +  +V+ A+   + M  +G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              DT +Y T + GLC+ G    A EL   +    C  +  +++  I  LC+ G ++ A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   +P       +VTYN ++H  C  G++D A +LF ++  +   P+ + + TL+ G 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 386 IRNNETSKVVELLHRMDERN 405
                     ELL  M +++
Sbjct: 475 CHAERLDAAAELLAEMIQKD 494



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 9/265 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +  +GC   ++TY+ L++G C  G    AL LF  +          C+P+ +
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---------PCEPNTI 465

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ GLC    +D A ELL +M  K+   + VT+N ++  FC      EA  L  +M
Sbjct: 466 TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 525

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++TF+ ++D + K+   EEA +LL  ++  GV  +   Y++++D      R 
Sbjct: 526 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 585

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++  +++ MG +  V  Y+ ++   CK  E + A+  ++ M+S G  P   TY  L
Sbjct: 586 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 645

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     ++ A  +  E+   GV
Sbjct: 646 IEGLAHEGLLKEARYVLSELYAKGV 670



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 112/233 (48%)

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G   T   +  +    +M   GC+ +V +Y++L+   CK+     A+++  EM +KG  
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P +VTYN +  G+    +V+ A ++ + +  +G   D  +Y T + GLC      +   L
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +   KC  +  ++  L+   C+ G ++ A ++   + +     +    NI+I+A+C 
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G++D A+D   +M   G  PD +++ T++ G  R        ELL  M  +N
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  247 bits (630), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 142/403 (35%), Positives = 218/403 (54%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P+ +     +  + +       ++L  +M      FGV    +  
Sbjct: 69  DAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM----DLFGVA--HNDY 122

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+ LC+   +  A  +L +M    I PD VT+ ++I G C      EA  LF EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   PN VTF++++D LCK G + EA  + E M + GV PN + YN LM+G+CL   +
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++F  M   GC  +V SYSILINGYCK++ I+ A +L ++M  K + P  VTYNTL
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +  A +LF +M   G+  +   Y   +DGLCK+G++ EAL+L  +++  K 
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI  Y+ LI G+  +G+L++A ELF  L    +   V TYNIMI  L  +G  D+A+ 
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  ME  G  PD  ++N ++ G ++N + S  ++L+  M  R
Sbjct: 423 LFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGR 465



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 6/378 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  ++  FG   N  T + LIN LCR  H   A+++  +M      F +  +PD+V +T
Sbjct: 107 SLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKM------FKLGIQPDSVTFT 160

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLC EG + +A EL  +M  ++  P+ VT+  ++   C     +EA+ +F  M ++
Sbjct: 161 TLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK 220

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+PN+ T++ +M+  C   +M +AS++ E+M+  G  P+   Y+ L++G+C + R++ A
Sbjct: 221 GVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEA 280

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K L   M       N  +Y+ L+ G C    +  A  L+ +M S G+ P + TY+ L  G
Sbjct: 281 KALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDG 340

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +E A KL   MQ   +  D   Y   I G+   G +  A ELF  L        
Sbjct: 341 LCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPS 400

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y+ +I GL K G    A++LF  +     + D  +YN++I     +     A  L  
Sbjct: 401 VRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLID 460

Query: 365 DMEAKGVAPDCVAFNTLM 382
           +M  +  + D   F  L+
Sbjct: 461 EMVGRRFSADSSTFKMLL 478



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 181/346 (52%), Gaps = 41/346 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++ +K+   G +P+ +T++TLINGLC  G    A+ LF EM       G    P+ V 
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA------GRDAMPNTVT 193

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T ++D LCK+G V +A+ +   M +K + P++ TYN+++ G+C   + N+A ++F  M+
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+V ++S++++  CK+ +++EA  LL  M +  + PN   YNTLM G C    + 
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL-------------------- 222
            A+ELF  M S G   N+ +YSIL++G CK+  +E AL L                    
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373

Query: 223 ---------------YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                          +S++ + GI+P+V TYN +  GL +    + A+KLF +M+  G  
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFL 433

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
            D+ +Y   I G  +N     A++L   +   +   D  ++  L+D
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 156/277 (56%), Gaps = 6/277 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   G EPN+ TY+ L+NG C       A  +FE M+ G G     C P   
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV-GKG-----CAPSVH 262

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+G CK   +D+AK LL QM +K + P+ VTYN++++G C+A+   EA+ LF +M
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN+ T+S+++D LCK+G +EEA +LL  M +  + P+  +YN L+ G  + G++
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL 382

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKELF  + + G + +V +Y+I+I G  K    + A  L+ +M   G  P   +YN +
Sbjct: 383 EVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G  +      A +L DEM     +AD+  ++  +D
Sbjct: 443 IQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 5/302 (1%)

Query: 108 ANDSNE-----AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
           +N+SN+     A   F  M+    +P+ V     +  + K  +      L   M   GV 
Sbjct: 59  SNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVA 118

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            N +  N L++  C    ++ A  +   M  +G + +  +++ LING C    I+ A+ L
Sbjct: 119 HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVEL 178

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           ++EM  +   P  VT+  L   L +   V  A  +F+ M   GV  + + Y   ++G C 
Sbjct: 179 FNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCL 238

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              + +A ++F  +    C   + SYS LI+G CKS R+  A  L   +    LI + VT
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YN ++  LC    + +A +LF  M + G+ P+   ++ L+ G  ++    + ++LL  M 
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358

Query: 403 ER 404
           ER
Sbjct: 359 ER 360



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 6/173 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF K+ + G  PN+ TYS L++GLC+ GH   AL L   M     E      PD 
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE------PDI 366

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y  +I G+   G ++ AKEL  ++    I P V TYN +I+G      S+EA +LF +
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           M D G  P+  +++VI+    +N     A QL++ M+      ++  +  L+D
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 218/396 (55%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           + A L  ++  +GCEPN ITY+TL++ L ++G  I A NL + M+  +      CKP   
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHF 377

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D A EL   M D+   PD+ TYN +I G C AN  ++A++L   M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+VVT++ I+  LCK  +++EA ++ E++   G   +    +TL+DG C + R+
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L   ME  G   +V +Y+ILI+G+CK  +++ +L+ +SEML KG  PTV+TY+ +
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V     L   M   GV  D   Y + IDGLCK+    EA EL++ ++   C
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+D LCK  RL  A  L   +     + D VTYN +        + DKA  
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR 677

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           LF  M+++G +P    ++ L+   +   +  + +E+
Sbjct: 678 LFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713



 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 215/389 (55%), Gaps = 6/389 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+VITY+ L++ LC++     A  + E+MI         C P+ V Y T+I+G CK G
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLG 285

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+A  L  QM + + +PDV TYN +I G+C      +  +L  EM+  G +PN +T++
Sbjct: 286 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +MD L K+GK  +A  L ++M++   +P+ F +N ++D FC  G+++ A ELF  M   
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  ++++Y+I+I+G C+   I+ A  L   M   G  P VVTYN++  GL +  QV+ A
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           +++++ ++  G   D     T IDGLCK+  + +A +L R +       D+ +Y+ LI G
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK+ +L  +   F  +     +  V+TY+I+I  LC   ++     L   M  +GV PD
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPD 585

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + + +++ G  +++   +  EL   M +
Sbjct: 586 AIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 207/402 (51%), Gaps = 11/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF   +   C P+ ITYSTLING C+      A  L +EM     + G+V  P   
Sbjct: 150 EAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM----EKRGIV--PHNA 203

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD--KNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +Y TII GLC  G VD A   L+  +D  +N  P V+TY  ++   C +   ++A  +  
Sbjct: 204 VYNTIIKGLCDNGRVDSA---LVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILE 260

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M++ G  PNVVT++ +++  CK G M+EA  L   M++    P+ F YN L+DG+C   
Sbjct: 261 DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 320

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R     +L   M   GC+ N  +Y+ L++   K+ +   A +L   ML +  KP+  T+N
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 380

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +     ++ Q++ A++LF  M   G   D + Y   I G C+   I +A +L   +   
Sbjct: 381 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 440

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  D+ +Y+ ++ GLCK+ ++  A+E++  L  G    DVVT + +I  LC   ++D A
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  +ME  G APD VA+  L+ G  + ++  K +     M
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 173/292 (59%), Gaps = 6/292 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   GC P+V+TY+++++GLC+      A  ++E + NG G F      D V
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG-GYF-----LDVV 482

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +T+IDGLCK   +D A++LL +M+     PDVV Y  +I GFC A+  +++   F EM
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P V+T+S+++D+LCK+ ++ +   LL+ M++ GV P+A VY +++DG C +   
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL+  M+  GC   V +Y++L++  CK   ++ A+ L   M S G  P  VTYN++
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           F G ++  + ++AF+LF  M+  G +   + Y   +  L     + +A+E++
Sbjct: 663 FDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 1/248 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F  N L+  F    +   A +LF +     C  +  +YS LING+CK ++ +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM  +GI P    YNT+  GL +  +V+ A   + +MQR+  A     Y   +
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILV 243

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D LCK+  I +A  +   +    C  ++ +Y+ LI+G CK G +  A  LF+ +      
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV TYNI+I   C   +      L  +M   G  P+ + +NTLM   +++ +      L
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 363

Query: 398 LHRMDERN 405
              M  R+
Sbjct: 364 AQMMLRRD 371



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 41/205 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++ A F+++   GC P VITYS +I+ LC++        L + M+    E GV   PDA+
Sbjct: 534 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTML----ERGVT--PDAI 587

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK------------------------DKNIN----- 92
           +YT++IDGLCK    D+A EL   MK                        D+ I+     
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647

Query: 93  ------PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                 PD VTYNSV  GF  + + ++A RLF  M  +G  P    +S+++ +L    KM
Sbjct: 648 ESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKM 707

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL 171
           ++A ++ E  ++ G   +  +  TL
Sbjct: 708 DQAMEIWEEALEAGADVDPEISRTL 732


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/382 (40%), Positives = 219/382 (57%), Gaps = 7/382 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+    + G   + + Y TLINGLC+ G T  A+ L  +M  G    GV  +P+ +
Sbjct: 144 EALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG----GV--RPNLI 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  ++DGLCKEG V +A  L  +M  K I  DV TYNS+I GFC A     A RL  EM
Sbjct: 198 MYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM 257

Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M + V+P+V TF++++D LCK G + EA  +  LMI+ G+ P+    N LM+G+CL G 
Sbjct: 258 VMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGC 317

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ AKE+F  M   G   NV SYS LINGYCK K ++ AL L +EM  + + P  VTYN 
Sbjct: 318 MSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNC 377

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +V   + L + M+  G A D   Y   +D   K   + +AL LF+ +    
Sbjct: 378 LLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +IR+Y+ LIDGLCK GR+K A E+F  L       ++ TYNIMI+ L  +G +D+A 
Sbjct: 438 ISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAE 497

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L L+M   G  P+ V F+ L+
Sbjct: 498 ALLLEMVDDGFPPNAVTFDPLV 519



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 200/378 (52%), Gaps = 9/378 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           + FG +P   T +TL+ GLC  G T  ALNL++  ++    F  VC      Y T+I+GL
Sbjct: 120 RGFGVDP--FTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVC------YGTLINGL 171

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK G    A ELL +M+   + P+++ YN V+ G C      EA  L  EM+ +G+  +V
Sbjct: 172 CKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDV 231

Query: 131 VTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            T++ ++   C  G+ + A +LL E++++  VRP+ + +N L+D  C  G V  A+ +F 
Sbjct: 232 FTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFG 291

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G + +V S + L+NG+C    +  A  ++  M+ +G  P V++Y+TL  G  ++ 
Sbjct: 292 LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVK 351

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V+ A +L  EM +  +  DT  Y   +DGL K+G ++   +L   +R      D+ +Y+
Sbjct: 352 MVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYN 411

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+D   K   L  A  LF  +    +  ++ TYNI+I  LC  G+M  A ++F  +  K
Sbjct: 412 VLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVK 471

Query: 370 GVAPDCVAFNTLMLGCIR 387
           G  P+   +N ++ G  R
Sbjct: 472 GCRPNIRTYNIMINGLRR 489



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++      P++++ + L++ + +T H    ++L   + +         KP  V
Sbjct: 38  DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP-----KPSLV 92

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +  I+ L   G +  A  ++ ++  +    D  T  ++++G C    + EA  L+   
Sbjct: 93  TLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHA 152

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + V +  +++ LCK GK  +A +LL  M + GVRPN  +YN ++DG C  G V
Sbjct: 153 VSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLV 212

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
             A  L   M   G   +VF+Y+ LI+G+C   + +GA+ L +EM+ K  ++P V T+N 
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNI 272

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L ++  V  A  +F  M + G+  D  +    ++G C  G + EA E+F  +    
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ SYS LI+G CK   +  A  L   + +  L+ D VTYN ++  L   G++    
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           DL   M A G APD + +N L+
Sbjct: 393 DLVEAMRASGQAPDLITYNVLL 414



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 6/246 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   G EP+V++ + L+NG C  G    A  +F+ M+    E G +  P+ +
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV----ERGKL--PNVI 338

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G CK   VD+A  LL +M  +N+ PD VTYN ++ G   +        L   M
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAM 398

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+++T++V++D+  K   +++A  L + ++  G+ PN   YN L+DG C  GR+
Sbjct: 399 RASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRM 458

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKE+F  +   GC+ N+ +Y+I+ING  +   ++ A +L  EM+  G  P  VT++ L
Sbjct: 459 KAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPL 518

Query: 242 FIGLFE 247
              L E
Sbjct: 519 VRALLE 524



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 161/339 (47%), Gaps = 4/339 (1%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QP 128
           L K    D A     +M   +  P +V+ N ++              L   +  +G  +P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++VT S+ ++ L   G+M  A  ++  +++ G   + F   TLM G CL GR   A  L+
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
               S G   +   Y  LING CK  +   A+ L  +M   G++P ++ YN +  GL + 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIR 306
             V  A  L  EM   G+  D + Y + I G C  G    A+ L   + ++K ++  D+ 
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEM-VMKEDVRPDVY 268

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +++ L+D LCK G +  A  +F  + +  L  DVV+ N +++  C  G M +A ++F  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +G  P+ ++++TL+ G  +     + + LL  M +RN
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRN 367


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA    +K+   G  P+  TY++LI G CR      A  +F  M          C+ + 
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------CQRNE 264

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I GLC+ G +++A +L   M + N  P V TY  +I     +    EA  LF E
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV T++V++D LCK  KM+EA ++L  M + G+ P+   YN L+DG+C  G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A E+   MES  C  N  +Y+ LI G CK +++  A++L ++ML + + P+++TYN+
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +++ +E A++L   M  +G+  D W Y  FID LCK G + EA  LF +++   
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +   Y+ LIDG CK G++ +A+ L   +     + +  TYN++I  LC + KM +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M   GV P  V +  L+   +++      +++ + M
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 212/468 (45%), Gaps = 70/468 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++K  GCEPNV TY+ LI+GLC+      A  +  EM     E G++  P  
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM----SEKGLI--PSV 369

Query: 61  VIYTTIIDGLCKEGFVD-----------------------------------KAKELLLQ 85
           V Y  +IDG CKEG +D                                   KA  LL +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M ++ ++P ++TYNS+I G C  ND   A RL   M + G+ P+  T+SV +D LCK G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +EEA  L + +   GV+ N  +Y  L+DG+C  G+++ A  L   M +  C  N ++Y++
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G CK K+++ A SL ++ML+ G+KPTVVTY  L   + +    + A K+F+ M   G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   Y  F+      G + E  ++   +       D+ +Y+ LIDG  + G    A+
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDK--------------------------- 358
           +    +        +   +I+I  L  + +M +                           
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 359 --AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             A  LF  M   G   D   +  L+ G  +     +   L+H M ER
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 777



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 204/413 (49%), Gaps = 38/413 (9%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELL 83
           ++I   C     +  L +F +M N +GEF    KP    Y TI+  L K   +D+ K + 
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVY 182

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           L++ +  I+P++ T+N+++ G+C   +  EA+    +++  G+ P+  T++ ++   C+N
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV-------------- 189
             ++ A ++  +M Q G + N   Y  L+ G C  GR+N A +LF               
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302

Query: 190 ---------------------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
                                 M+  GC+ NV +Y++LI+G CK  +++ A  + SEM  
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG+ P+VVTYN L  G  +   ++ AF++ D M+ +    +T  Y   I GLCK   + +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A+ L   +   K    + +Y+ LI G CK   L+ A+ L   +    L+ D  TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LC +G++++A  LF  ++AKGV  + V +  L+ G  +  +      LL RM
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 193/405 (47%), Gaps = 14/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  +KA G + N + Y+ LI+G C+ G   VA +L E M+N        C P++ 
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND------ACLPNSY 545

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCKE  + +A  L+ +M    + P VVTY  +I         + A ++F  M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QP+V T++  +      G +EE   ++  M + G+ P+   Y  L+DG+   G  
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA +    M   GCK +++  SILI        ++   S        GI  +V   N++
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS------EIGID-SVSNVNSV 718

Query: 242 FIG-LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            I  +++  + E A KLF++M  HG   D   Y   I G C+   + EA  L   ++   
Sbjct: 719 DIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 778

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                  Y+ L+D  CK G    A  L  ++    L+  + +Y +++  L  +G  +KA 
Sbjct: 779 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK 838

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +F  + + G   D VA+  L+ G ++ +   +  EL+  M+E++
Sbjct: 839 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKD 883



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 5/309 (1%)

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQG---VQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           S+I+  C   D      +F +M   G    +P +  ++ I+  L K   ++E   +   +
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKE 215
           +   + PN + +N +++G+C  G V  A EL+ S +   G   + F+Y+ LI G+C+NK 
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A  ++  M  KG +   V+Y  L  GL E  ++  A KLF +M           Y  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I  L  +G  VEAL LF  ++   CE ++ +Y+ LIDGLCK  ++  A ++   +    
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           LI  VVTYN +I   C +G +D A ++   ME+    P+   +N L+ G  +  +  K +
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 396 ELLHRMDER 404
            LL++M ER
Sbjct: 425 ALLNKMLER 433


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA    +K+   G  P+  TY++LI G CR      A  +F  M          C+ + 
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------CQRNE 264

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I GLC+ G +++A +L   M + N  P V TY  +I     +    EA  LF E
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV T++V++D LCK  KM+EA ++L  M + G+ P+   YN L+DG+C  G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A E+   MES  C  N  +Y+ LI G CK +++  A++L ++ML + + P+++TYN+
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +++ +E A++L   M  +G+  D W Y  FID LCK G + EA  LF +++   
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +   Y+ LIDG CK G++ +A+ L   +     + +  TYN++I  LC + KM +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M   GV P  V +  L+   +++      +++ + M
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 221/491 (45%), Gaps = 94/491 (19%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++K  GCEPNV TY+ LI+GLC+      A  +  EM     E G++  P  
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM----SEKGLI--PSV 369

Query: 61  VIYTTIIDGLCKEGFVD-----------------------------------KAKELLLQ 85
           V Y  +IDG CKEG +D                                   KA  LL +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M ++ ++P ++TYNS+I G C  ND   A RL   M + G+ P+  T+SV +D LCK G+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +EEA  L + +   GV+ N  +Y  L+DG+C  G+++ A  L   M +  C  N ++Y++
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD------ 259
           LI G CK K+++ A SL ++ML+ G+KPTVVTY  L   + +    + A K+F+      
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 260 -----------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
                                        +M   G+  D   Y   IDG  + G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLK------------------IAWELFHSLP 332
           +  + +    C+  +   S LI  L    R+K                  IA +LF  + 
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 DV  Y  +I   C   ++++A  L   M+ +G++P    +N+L+  C +    +
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 789

Query: 393 KVVELLHRMDE 403
           + V L+  M E
Sbjct: 790 EAVRLVDAMVE 800



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 204/413 (49%), Gaps = 38/413 (9%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELL 83
           ++I   C     +  L +F +M N +GEF    KP    Y TI+  L K   +D+ K + 
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVY 182

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           L++ +  I+P++ T+N+++ G+C   +  EA+    +++  G+ P+  T++ ++   C+N
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV-------------- 189
             ++ A ++  +M Q G + N   Y  L+ G C  GR+N A +LF               
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302

Query: 190 ---------------------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
                                 M+  GC+ NV +Y++LI+G CK  +++ A  + SEM  
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG+ P+VVTYN L  G  +   ++ AF++ D M+ +    +T  Y   I GLCK   + +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A+ L   +   K    + +Y+ LI G CK   L+ A+ L   +    L+ D  TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LC +G++++A  LF  ++AKGV  + V +  L+ G  +  +      LL RM
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 193/420 (45%), Gaps = 24/420 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L + +   G  P+  TYS  I+ LC+ G    A  LF+  +   G      K + VI
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS-VKAKG-----VKANEVI 511

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG CK G +D A  LL +M +    P+  TYN +I G C      EA  L  +M+
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+P VVT+++++ E+ K+G  + A ++   M+ +G +P+   Y   +  +   G + 
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              ++   M   G   ++ +Y++LI+GY +      A      M+  G KP++   + L 
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691

Query: 243 ---------------IGLFEIH---QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                          IG+  +    + E A KLF++M  HG   D   Y   I G C+  
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 751

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA  L   ++          Y+ L+D  CK G    A  L  ++    L+  + +Y 
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +++  L  +G  +KA  +F  + + G   D VA+  L+ G ++ +   +  EL+  M+E+
Sbjct: 812 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 871



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 5/309 (1%)

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQG---VQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           S+I+  C   D      +F +M   G    +P +  ++ I+  L K   ++E   +   +
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKE 215
           +   + PN + +N +++G+C  G V  A EL+ S +   G   + F+Y+ LI G+C+NK 
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEA-ELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A  ++  M  KG +   V+Y  L  GL E  ++  A KLF +M           Y  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I  L  +G  VEAL LF  ++   CE ++ +Y+ LIDGLCK  ++  A ++   +    
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           LI  VVTYN +I   C +G +D A ++   ME+    P+   +N L+ G  +  +  K +
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 396 ELLHRMDER 404
            LL++M ER
Sbjct: 425 ALLNKMLER 433



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 170/402 (42%), Gaps = 59/402 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  +KA G + N + Y+ LI+G C+ G   VA +L E M+N        C P++ 
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND------ACLPNSY 545

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCKE  + +A  L+ +M    + P VVTY  +I         + A ++F  M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC---LT 178
           +  G QP+V T++  +      G +EE   ++  M + G+ P+   Y  L+DG+    LT
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 179 GRV-----------------------------NRAKE---------------------LF 188
            R                              NR KE                     LF
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLF 725

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   GC  +V  Y  LI G+C+ + +E A  L   M  +G+ P+   YN+L     ++
Sbjct: 726 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 785

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
                A +L D M  +G+     +Y+  + GL   G   +A  +F  L       D  ++
Sbjct: 786 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 845

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             LIDGL K   +    EL   +       + +TY+++I  L
Sbjct: 846 KVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 232/433 (53%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG------VV 55
           EA ++F  +   G +PN   Y  L++G    G  I   +L + MI     F       ++
Sbjct: 323 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 382

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                       +PD V Y+T+I  LCK G V+ A     QM  + ++
Sbjct: 383 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLS 442

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++++ S+I G C   +  + + L  EM+++G+ P+ +  + IMD LCK G++ EA   
Sbjct: 443 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 502

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +++I IGV+P+   YNTL+DG+C  G+++ + +    M S+G + + ++Y+ L+NGY K
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  +E AL+LY EM  K +K   +T N +  GLF+  ++  A +L+ +M   G       
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIET 622

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GLC+N  + EAL +F  LR  + ELD+R++S +I+ L K GR+  A  LF ++ 
Sbjct: 623 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMV 682

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + DV+TY++MI +   +G ++++ +LFL ME  G A D    N ++   +   +  
Sbjct: 683 LRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVR 742

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 743 RAGTYLTKIDEKN 755



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 209/397 (52%), Gaps = 5/397 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F ++   G  P+V +Y+ LI GLC    +  AL L   +I+   + G  C P+ V Y T
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL---LIHMTADGGYNCSPNVVSYNT 205

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG  KEG VDKA  L  +M  + + PDVVTYNS+I G C A   ++A  +   M D+G
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P+  T+++++   C  G++EEA +LL+ M   G++P+   Y+ L+  +C  GR   A+
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F SM   G K N   Y IL++GY     +     L   M+  GI      +N L    
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V++A   F EM+++G+  D  +Y T I  LCK G + +A+  F  +       +I
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNI 445

Query: 306 RSYSCLIDGLCKSGRLKIAWEL-FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            S++ LI GLC  G  K   EL F  + RG+   D +  N ++  LC +G++ +A D F 
Sbjct: 446 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIH-PDAIFMNTIMDNLCKEGRVVEAQDFFD 504

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   GV PD V++NTL+ G     +  + ++ L RM
Sbjct: 505 MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 221/461 (47%), Gaps = 79/461 (17%)

Query: 2   EAAALFTKLKAFG---CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           EA  L   + A G   C PNV++Y+T+I+G  + G    A  LF EM+ G G       P
Sbjct: 180 EALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMM-GQG-----LPP 233

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D V Y ++IDGLCK   +DKA  +L  M DK + PD  TYN +IRG+C      EA RL 
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+QP+VVT+S+++   CK G+  EA  + + M++ G +PN+ +Y+ L+ G+   
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 353

Query: 179 GR-----------------------------------VNRAKELFVSMESMGCKHNVFSY 203
           G                                    V++A   F  M   G + +V SY
Sbjct: 354 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 413

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I+  CK   +E A+  +++M+S+G+ P ++++ +L  GL  I + ++  +L  EM  
Sbjct: 414 STVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 473

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC------- 316
            G+  D     T +D LCK G +VEA + F  +  +  + D+ SY+ LIDG C       
Sbjct: 474 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDE 533

Query: 317 ----------------------------KSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
                                       K+GR++ A  L+  + R  +    +T NIM+H
Sbjct: 534 SIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLH 593

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            L   G++  A +L++ M  +G       +NT++ G   N+
Sbjct: 594 GLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENS 634



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 209/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+V+TY++LI+GLC+      A+ + + M +     GV+  PD  
Sbjct: 218 KAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK----GVM--PDTR 271

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G +++A  LL +M    + PDVVTY+ +I+ +C      EA+ +F  M
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN   + +++      G + +   LL+LMI+ G+      +N L+  +   G V
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A   F  M   G + +V SYS +I+  CK   +E A+  +++M+S+G+ P ++++ +L
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  I + ++  +L  EM   G+  D     T +D LCK G +VEA + F  +  +  
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ SY+ LIDG C  G++  + +    +    L  D  TYN +++    +G+++ A  
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALA 571

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+ +M  K V    +  N ++ G  +        EL  +M +R
Sbjct: 572 LYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR 614



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 168/379 (44%), Gaps = 21/379 (5%)

Query: 38  ALNLFEEMING---------NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD 88
           ALNLF+E++           N    VV + D+         L        A  L   M  
Sbjct: 33  ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAAL--------AVSLFNTMVR 84

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
             +N        +IR FC     + A   F   +  G +   VT + ++  LC   + ++
Sbjct: 85  SGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDD 144

Query: 149 ASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG---CKHNVFSYS 204
           A  ++   M ++G  P+ F YN L+ G C+  +   A EL + M + G   C  NV SY+
Sbjct: 145 AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +I+G+ K  E++ A  L+ EM+ +G+ P VVTYN+L  GL +   +++A  +   M   
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  DT  Y   I G C  G + EA+ L + +     + D+ +YS LI   CK GR   A
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +F S+ R     +   Y+I++H     G +    DL   M   G+  +  AFN L+  
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384

Query: 385 CIRNNETSKVVELLHRMDE 403
             ++    K +     M +
Sbjct: 385 YAKHGAVDKAMTAFTEMRQ 403



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 146/335 (43%), Gaps = 46/335 (13%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE-------ASQLLELMIQIGVRPNA 165
           +A  LF E++ Q    +V  F+ ++  + +             A  L   M++ GV   A
Sbjct: 32  DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMA 91

Query: 166 FVYNTLMDGFCLTGRV--------------------------------NRAKE----LFV 189
            +   L+  FC  GR+                                NR  +    +F 
Sbjct: 92  AIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFR 151

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVVTYNTLFIGLF 246
            M  +G   +VFSY+ LI G C  K+ + AL L   M + G     P VV+YNT+  G F
Sbjct: 152 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFF 211

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +  +V++A+ LF EM   G+  D   Y + IDGLCK   + +A+ + + +       D R
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTR 271

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ +I G C  G+L+ A  L   +    L  DVVTY+++I   C  G+  +A  +F  M
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             KG  P+   ++ L+ G         V +LL  M
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 131/258 (50%), Gaps = 14/258 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F  +   G +P+V++Y+TLI+G C  G    ++   + M++      +  +PD+
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS------IGLRPDS 550

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y ++++G  K G V+ A  L  +M  K++    +T N ++ G   A     A+ L+++
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM----IQIGVRPNAFVYNTLMDGFC 176
           M+D+G Q  + T++ ++  LC+N  ++EA ++ E +     ++ VR  + V N L+    
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK--- 667

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR++ AK LF +M   G   +V +YS++I  + +   +E + +L+  M   G      
Sbjct: 668 -VGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSH 726

Query: 237 TYNTLFIGLFEIHQVERA 254
             N +   L E   V RA
Sbjct: 727 MLNIIVRRLLEKGDVRRA 744


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/410 (35%), Positives = 226/410 (55%), Gaps = 16/410 (3%)

Query: 5   ALFTKLKAFGCEPNVITYSTL------INGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           A+   +   G EP ++T +T+      +NGLC+ G T  AL   ++M+  N E      P
Sbjct: 133 AVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLE------P 186

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC-YANDSNEAKRL 117
           + V+Y  I+DGLCK G V +A  L  +M   N+ P+VVTYN +I+G C       E   L
Sbjct: 187 NVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGL 246

Query: 118 FIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           F EM+ ++G+ P+V TFS++++  CK G +  A  ++  MI+IGV  N   YN+L+ G+C
Sbjct: 247 FNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306

Query: 177 LTGRVNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           L  R+  A  +F  M  E  GC  +V +Y+ LI+G+CK K++  A+SL SEM+ KG+ P 
Sbjct: 307 LRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPD 366

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V T+ +L  G FE+ +   A +LF  M+  G           +DGL K     EA+ LFR
Sbjct: 367 VFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFR 426

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     +LDI  Y+ ++DG+CK G+L  A +L   +    L  D  T+NIMI  LC +G
Sbjct: 427 AMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREG 486

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +D A +L   M+  G  P+  ++N  + G +R  + S+  + L  M ++
Sbjct: 487 LLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDK 536



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 193/368 (52%), Gaps = 9/368 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC-RTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  LF ++     EPNV+TY+ LI GLC   G     + LF EM+    E G+V  PD 
Sbjct: 206 EALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMV---AEKGIV--PDV 260

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             ++ +++G CKEG + +A+ ++  M    +  +VVTYNS+I G+C  N   EA R+F  
Sbjct: 261 QTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDL 320

Query: 121 MM--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           M+   +G  P+VVT++ ++   CK  K+ +A  LL  M+  G+ P+ F + +L+ GF   
Sbjct: 321 MVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEV 380

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+   AKELF++M+  G    + + +++++G  K      A++L+  M   G+   +V Y
Sbjct: 381 GKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIY 440

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +  G+ ++ ++  A KL   +   G+  D++ +   I GLC+ G + +A EL R ++ 
Sbjct: 441 NIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKE 500

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C  +  SY+  + GL +   +  + +    +       D  T  ++I  L A+ + D 
Sbjct: 501 NGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANEE-DN 559

Query: 359 AHDLFLDM 366
           A   FL +
Sbjct: 560 AFQEFLQI 567



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 139/287 (48%), Gaps = 12/287 (4%)

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT------GRVN 182
           +V T +++++ LC+  K      +L LM +IG+ P     NT+ +G C+       G  +
Sbjct: 111 DVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTS 170

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E    M     + NV  Y+ +++G CK   +  AL L+ EM    ++P VVTYN L 
Sbjct: 171 GALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLI 230

Query: 243 IGLF-EIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            GL  E+        LF+EM    G+  D   +   ++G CK G ++ A  +   +  + 
Sbjct: 231 QGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIG 290

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR---GVLIADVVTYNIMIHALCADGKMD 357
            EL++ +Y+ LI G C   R++ A  +F  + R   G L   VVTYN +IH  C   K++
Sbjct: 291 VELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCL-PSVVTYNSLIHGWCKVKKVN 349

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           KA  L  +M  KG+ PD   + +L+ G     +     EL   M ++
Sbjct: 350 KAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQ 396



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           I+ ++ L   + KS     A  L  +L   G  IADV T NI+I+ LC   K      + 
Sbjct: 76  IQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVL 135

Query: 364 LDMEAKGVAPDCVAFNTLMLG-CIRN-----NETSKVVELLHRMDERN 405
             M   G+ P  V  NT+  G CI N      +TS  +E L +M +RN
Sbjct: 136 GLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRN 183


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/403 (34%), Positives = 216/403 (53%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      LK  G E +  T   + NGLC+ GH+  AL+  ++M   N      C  D  
Sbjct: 171 QAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKN------CNLDVT 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++DGLCK+G V +A  L  QM  K I PD+ TYN +I G C  +   EA  L   M
Sbjct: 225 AYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+V TF+VI     K G +  A  +   M+ +G+  +   Y +++   C+  ++
Sbjct: 285 MRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQM 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M S GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ P VVT++TL
Sbjct: 345 KDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTL 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +  +   A +LF  M +HG   +       +DGL K  +  EA+ LFR L  +  
Sbjct: 405 IGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNW 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L+I  Y+ ++DG+C SG+L  A ELF  L    +  DVVTYNIMI  LC +G +D A D
Sbjct: 465 DLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAED 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L + ME  G  P+   +N  + G +R  + SK  + L  M ++
Sbjct: 525 LLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDK 567



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 18/294 (6%)

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
             N  P ++  +     F + +DS+ ++  F++ M      N  +  V +D   K     
Sbjct: 24  SSNSKPFLLHPSHSSSTFSFVSDSDTSRAQFLDSMR-----NAKSVDVALDFYHK----- 73

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                   M+ +   P    +N L            A  L   M  +G K  V + +I+I
Sbjct: 74  --------MVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVI 125

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           N  C+        S+   M   G++P++VT+NT+  GL     V +A +  D ++  G  
Sbjct: 126 NCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYE 185

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           +D++      +GLCK G+   AL   + +    C LD+ +YS ++DGLCK G +  A  L
Sbjct: 186 SDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNL 245

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           F  +    +  D+ TYN +IH LC   +  +A  L  +M  KG+ PD   FN +
Sbjct: 246 FSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI 299


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 216/430 (50%), Gaps = 54/430 (12%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  + A G  PNV+TY TLI+G CR G  + A  LF+EMI           P  VIYT 
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTI 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC E  + +A+ +   M++  + P++ TYN+++ G+C      +A  L+ EM+  G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNVVTF +++D LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A 
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 186 ELFVSMESMGCKHNVFSYSI-----------------------------------LINGY 210
            L   +E      +VF+YSI                                   LI+GY
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E A+ + S+M  KGI+P ++T++TL  G  +  ++E A  L+ EM   G+  D 
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-- 328
            AY   IDG  K+G   EA  L + ++      ++ + SCLIDGLCK GR+  A +LF  
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533

Query: 329 -----------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                      + L R +   + V Y  +I  LC DG++ KA   F DM   G+ PD   
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593

Query: 378 FNTLMLGCIR 387
              ++ G  R
Sbjct: 594 CIVIIQGHFR 603



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ K+      P +   + +++GL + G       ++ +M+           P+ V
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS------PNVV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C++G   KA  L  +M +K I P VV Y  +IRG C  +  +EA+ +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ T++ +MD  CK   +++A +L   M+  G+ PN   +  L+DG C T  +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I P V TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +     
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I ++S LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A  
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +M+  G+ P+    + L+ G  ++   S  ++L 
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 196/391 (50%), Gaps = 11/391 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY-----------TTIIDGLCK 72
           ++ N L R   +    N+F  +I    E G+V +   V Y             ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G  D   ++   M  +  +P+VVTY ++I G C   D  +A RLF EM+++ + P VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +++++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C    V +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   NV ++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  E+++H +  D + Y   I GLC    + EA  L + ++      +  +Y+ LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK G ++ A E+   +    +  +++T++ +I   C  GKM+ A  L+ +M  KG+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD VA+  L+ G  ++  T +   L   M E
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 161/304 (52%), Gaps = 19/304 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L ++++     P+V TYS LI GLC       A  L +EM     + G +  P+AV
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFL--PNAV 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CKEG ++KA E+  QM +K I P+++T++++I G+C A     A  L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+VV ++ ++D   K+G  +EA +L + M + G+ PN F  + L+DG C  GR+
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 182 NRAKELFVS-------------MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + A +LF++             ++   C  N   Y+ LI G C +  I  A   +S+M  
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G++P V T   +  G F    +     L  ++ + G+  ++  YR    G  ++GY+  
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKS 644

Query: 289 ALEL 292
           AL  
Sbjct: 645 ALSF 648



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 5/323 (1%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +L +++     P+V  +  +I  F       EA  ++ +M    V P +   ++++D L 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G+ +   ++   M+  G  PN   Y TL+DG C  G   +A  LF  M        V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ILI G C    I  A S++  M + G+ P + TYNT+  G  +I  V++A +L+ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  +   +   IDGLCK   +V A +    +       +I  Y+CLIDG CK+G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  L   + +  ++ DV TY+I+I  LC   +M++A  L  +M+ KG  P+ V +NTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +     K +E+  +M E+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEK 432



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 203/473 (42%), Gaps = 82/473 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K  G  PN +TY+TLI+G C+ G+   A+ +  +M     E G+  +P+ +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNII 439

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T+IDG CK G ++ A  L  +M  K + PDVV Y ++I G     ++ EA RL  EM
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV---------------RPNAF 166
            + G+ PNV T S ++D LCK+G++ +A +L   + + G                 PN  
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHV 557

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  L+ G C  GR+ +A + F  M   G + +VF+  ++I G+ +   +   + L +++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE--MQRHGVAADTWAYRTFIDGL---- 280
           L  GI P    Y  L  G  E   ++ A     E       V ++ W   T         
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCV 677

Query: 281 ------CKNGYIV-----------------------------------------EALELF 293
                 C + Y+                                          +AL+LF
Sbjct: 678 VTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLF 737

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCA 352
           R +++   + DI + +  +      G L +  E  H+  R   L  D+   N +I+    
Sbjct: 738 RQMQMDDXQPDIVTVTVALSACADLGALDMG-EWIHAYIRHRGLDTDLCLNNSLINMYSK 796

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G++  A  LF   + K    D   + ++++G   + +  + ++L   M E N
Sbjct: 797 CGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETN 845



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++  G + ++   ++LIN   + G    A  LF+             K D   +T++I G
Sbjct: 775 IRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDG----------TQKKDVTTWTSMIVG 824

Query: 70  LCKEGFVDKAKELLLQMKDKN----------------INPDVVTYNSVIRGFCYANDSNE 113
               G  ++A +L  +MK+ N                + P+ VT+  V+    +A    E
Sbjct: 825 HALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEE 884

Query: 114 AKRLFIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            K+ F  M  D  ++P +  F  ++D LC+ G + EA    E ++++ VRPNA V+ TL+
Sbjct: 885 GKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL 941

Query: 173 DGFCLTGRVN 182
               L G  N
Sbjct: 942 GACSLQGDSN 951



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 24/222 (10%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+A +LF +M     QP++VT +V +      G ++    +   +   G+  +  + N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ +   G +  A+ LF   +    K +V +++ +I G+  + + E AL L++EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMK---- 842

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                          E ++  R  K   E +   V  +   +   +      G + E  +
Sbjct: 843 ---------------ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 292 LFRTLR-ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
            FR+++        I  + C++D LC++G L  A+E    +P
Sbjct: 888 HFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP 929



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 30/222 (13%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL LF +M   + +      PD V  T  +      G +D  + +   ++ + ++ D+  
Sbjct: 733 ALQLFRQMQMDDXQ------PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            NS+I  +    +   A+RLF    D   + +V T++ ++     +G+ EEA QL   M 
Sbjct: 787 NNSLINMYSKCGEIGTARRLF----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 158 QIGVR----------------PNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNV 200
           +   R                PN   +  ++      G V   K+ F SM E    +  +
Sbjct: 843 ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI 902

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             +  +++  C+   +  A   Y  +L   ++P  V + TL 
Sbjct: 903 SHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL 941


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 228/434 (52%), Gaps = 31/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------EFGV- 54
           EA  +F  +   G +P + TY TL+ G    G  +    L + M+  NG       F + 
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 269

Query: 55  VC-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           VC                        P+AV Y  +I  LCK G V+ A     QM D+ +
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P  + YNS+I G C  N    A+ L +EM+D+G+  N + F+ I+D  CK G++ E+ +
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S+G K +  +YS LINGYC
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   ++ AL L+ EM S G+ P ++TYN +  GLF+  +   A +L+  + + G   +  
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELS 509

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLCKN    +AL +F+ L ++  +L+ R+++ +ID L K GR   A +LF + 
Sbjct: 510 TYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 569

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +  TY +M   +   G +++   LFL ME  G   D    N ++   ++  E 
Sbjct: 570 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 629

Query: 392 SKVVELLHRMDERN 405
           ++    L  +DE++
Sbjct: 630 TRAGTYLSMIDEKH 643



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 226/466 (48%), Gaps = 75/466 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L   G  P+V +Y+ L+NGLC    +  AL L   M +  G+    C PD V
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVV 89

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G  KEG +DK      +M D+ I+P+VVTYNS+I   C A   ++A  +   M
Sbjct: 90  SYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+ +T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR 
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 182 NRAKELFVSMESMGCKHNVFSY-----------------------------------SIL 206
             A+++F SM   G K  + +Y                                   SIL
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVT----------------------------- 237
           +  Y K +++E A+ ++S+M  +G+ P  VT                             
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 238 ------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                 YN+L  GL   ++ ERA +L  EM   G+  +T  + + ID  CK G ++E+ +
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +  +  + DI +YS LIDG C +G++  A +L  S+    +  D VTY+ +I+  C
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              +M  A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 209/457 (45%), Gaps = 76/457 (16%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V++YST+ING  + G      + + EM++          P+ V Y +II  LCK  
Sbjct: 84  CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQR------ISPNVVTYNSIIAALCKAQ 137

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VDKA E+L  M    + PD +TYNS++ GFC +    EA     +M   GV+P+VVT++
Sbjct: 138 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 197

Query: 135 VIMDELCKNGKMEEASQ-----------------------------------LLELMIQI 159
            +MD LCKNG+  EA +                                   LL+LM++ 
Sbjct: 198 SLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 257

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ PN +V++ L+  +    +V  A  +F  M   G   N  +Y  +I   CK+  +E A
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF------------------------ 255
           +  + +M+ +G+ P  + YN+L  GL   ++ ERA                         
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 377

Query: 256 -----------KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                      KLFD M R GV  D   Y T IDG C  G + EA +L  ++  +  + D
Sbjct: 378 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 437

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +YS LI+G CK  R+K A  LF  +    +  D++TYNI++  L    +   A +L++
Sbjct: 438 CVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 497

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   G   +   +N ++ G  +N  T   + +   +
Sbjct: 498 GITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNL 534



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 200/392 (51%), Gaps = 9/392 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 176 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPEIT 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ ++  +       EA  +F +M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN VT+  ++  LCK+G++E+A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP ++TY+TL
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +     
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ ++ GL ++ R   A EL+  + +     ++ TYNI++H LC +   D A  
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 362 LFLDMEAKGVAPDCVAFNTL---MLGCIRNNE 390
           +F ++    +  +   FN +   +L   RN+E
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 3/260 (1%)

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYS 204
           E+A  + + +++ G+ P+ F YN L++G C   R   A EL   M   G  C  +V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING+ K  +++   S Y+EML + I P VVTYN++   L +   V++A ++   M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  D   Y + + G C +G   EA+   + +R    E D+ +Y+ L+D LCK+GR   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ++F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  + + +  +M ++
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQ 292



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 6/285 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 438

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   +  A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 439 VTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 498

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + T+++I+  LCKN   ++A ++ + +  + ++  A  +N ++D     GR
Sbjct: 499 ITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 558

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LFV+  S G   N ++Y ++         +E    L+  M   G        N 
Sbjct: 559 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 618

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 619 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 663


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 216/404 (53%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +   +  + G  P+  TY+TL+NGLC+ GH   A+ + + M+ G         PD  
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG------LDPDIY 344

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK G +++A ++L QM  ++ +P+ VTYN++I   C  N  +EA  +   +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V TF+ ++  LC +   + A  L E M   G RP+ F YN L+D  C + ++
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   ME  GC  NV  Y+ LI+G+CKNK IE A  ++ EM  +G+    VTYNTL
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +VE A +L D+M   G+  D + Y + +   CK G I +A ++ +T+    C
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ LI GLCK+GR+++A  L  S+    ++     YN +I AL    +  +A  
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDER 404
           LF +M  K   PD + +  +  G C       + V+    M ER
Sbjct: 645 LFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 216/393 (54%), Gaps = 6/393 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +GC    +T + LING C+ G    AL+  +E ++         +PD   Y T+++GLCK
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG------FRPDQFTYNTLVNGLCK 320

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G    A E++  M    ++PD+ TYNS+I G C   +  EA ++  +M+ +   PN VT
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ I+  LCK  +++EA+++  L+   G+ P+   +N+L+ G CL+     A +LF  M+
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC+ + F+Y++LI+  C ++++E AL+L  EM   G    VV YNTL  G  +  ++E
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++FDEM+  GV+ D+  Y T IDGLCK+  + +A +L   + +     D  +Y+ L+
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
              CK+G +K A ++  ++       D+VTY  +I  LC  G++  A  L   ++ KG+ 
Sbjct: 561 THFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMV 620

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               A+N ++    + N T + + L   M +++
Sbjct: 621 LTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 198/384 (51%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V T++ LI  LC+      A+ + EEM +    +G+   PD   +TTI+ G  + G +D
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPS----YGL--SPDETTFTTIMQGYIEGGNLD 255

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  +  QM +       VT N +I GFC     ++A     E + +G +P+  T++ ++
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK G  + A ++++ M+  G+ P+ + YN+L+ G C  G +  A ++   M S  C 
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N  +Y+ +I+  CK   ++ A  +   + SKGI P V T+N+L  GL      + A  L
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F+EM+  G   D + Y   ID LC +  + EAL L + + +  C  ++  Y+ LIDG CK
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R++ A E+F  +    +  D VTYN +I  LC   +++ A  L   M  +G+ PD   
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +N+L+    +  +  K  +++  M
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTM 579



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 173/346 (50%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KPD   Y  +++ L     +   +     M  + I  DV T+N +I+  C A+    A  
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  EM   G+ P+  TF+ IM    + G ++ A ++ E M++ G        N L++GFC
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR+++A        S G + + F+Y+ L+NG CK    + A+ +   ML  G+ P + 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN+L  GL ++ ++E A K+ D+M     + +   Y   I  LCK   + EA E+ R L
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +++ LI GLC S   K A +LF  +       D  TYN++I +LC+  K+
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           ++A +L  +ME  G A + V +NTL+ G  +N    +  E+   M+
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 185/387 (47%), Gaps = 7/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+   Y  ++  L + G       + EEM     EF      D  I+   ++   K    
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEF------DRGIFLIFVESYGKFELY 148

Query: 77  DKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           D+   ++  M+D+  I PD   YN ++     AN     +     M+ + ++ +V TF++
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LCK  ++  A  ++E M   G+ P+   + T+M G+   G ++ A  +   M   G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C     + ++LING+CK   I+ ALS   E +S+G +P   TYNTL  GL +I   + A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ D M   G+  D + Y + I GLCK G I EA+++   +    C  +  +Y+ +I  L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK  R+  A E+   L    ++ DV T+N +I  LC       A DLF +M+ KG  PD 
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMD 402
             +N L+     + +  + + LL  M+
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEME 475



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   + + GC P+++TY+TLI+GLC+ G   VA  L   +       G+V  P A 
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK----GMVLTPHA- 625

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIE 120
            Y  +I  L K     +A  L  +M DK+  PD +TY  V RG C       EA    +E
Sbjct: 626 -YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVE 684

Query: 121 MMDQGVQPNVVTFSVIMDELC 141
           M+++G  P   +F ++ + LC
Sbjct: 685 MIERGNIPEFSSFVMLAEGLC 705



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 1/172 (0%)

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P+   Y  +   L +    E   ++ +EM+  G   D   +  F++   K     E + +
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 293 FRTLRI-LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
            + +    + + D R Y+ L++ L  + +LK+      S+ R  +  DV T+NI+I ALC
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              ++  A  +  +M + G++PD   F T+M G I        + +  +M E
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 223/397 (56%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++  GC PN +TY+TL+   CR G     L+  E +++   E G   KP+ V
Sbjct: 28  EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE----LDGAERVVSLMREEGNA-KPNLV 82

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++GLCK G ++ A+++  +M  + + PDVV+YN+++ G+C     +E+  +F EM
Sbjct: 83  TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++   CK G +E+A  L+  M + G+R N   +  L+DGFC  G +
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KP VVTY+T+
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  L  
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +AH 
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   PD + ++ LML C    E   VV LL
Sbjct: 383 LLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALL 418



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 217/419 (51%), Gaps = 56/419 (13%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN++T+++++NGLC+ G    A  +F+EM+           PD V Y T++ G CK G 
Sbjct: 78  KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGC 131

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + ++  +  +M  + + PDVVT+ S+I   C A +  +A  L  +M ++G++ N VTF+ 
Sbjct: 132 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D  CK G +++A   +E M + G++P+   YN L++G+C  GR++ A+EL   ME+  
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K +V +YS +I+GYCK   ++ A  L  +ML KG+ P  +TY++L  GL E  ++  A 
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF+ M + GV  D + Y T IDG CK G + +AL L   +       D+ +YS LI+GL
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371

Query: 316 CKSGRLKIA----WELFHSLP-------------------------------RGVLI-AD 339
            KS R K A    ++L+H  P                               +G++  AD
Sbjct: 372 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 431

Query: 340 VV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            V               Y+I+IH  C  G + KA      M   G +P+  +  +L+ G
Sbjct: 432 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 490



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 208/390 (53%), Gaps = 9/390 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDAVIYTTIIDGLCK 72
           G  PNV TY+ L+  LC  G         EE +   G+  G  C P+AV Y T++   C+
Sbjct: 5   GVAPNVYTYNILVRALCARGR-------LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 57

Query: 73  EGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
            G +D A+ ++  M+++ N  P++VT+NS++ G C A     A+++F EM+ +G+ P+VV
Sbjct: 58  AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 117

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           +++ ++   CK G + E+  +   M Q G+ P+   + +L+   C  G + +A  L   M
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G + N  +++ LI+G+CK   ++ AL    EM   GI+P+VV YN L  G  ++ ++
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A +L  EM+   V  D   Y T I G CK G +  A +L + +       D  +YS L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA  L  +M  KGV
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            PD V ++ L+ G  ++  T +   LL ++
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEAHRLLFKL 387



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 205/380 (53%), Gaps = 21/380 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+ A+F+++   G  P+V+T+++LI+  C+ G+   A+ L  +M     E G+  + + V
Sbjct: 134 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM----RERGL--RMNEV 187

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDG CK+GF+D A   + +M+   I P VV YN++I G+C     + A+ L  EM
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VVT+S I+   CK G ++ A QL + M++ GV P+A  Y++L+ G C   R+
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ P VVTY+ L
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF---------------IDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 368 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 427

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA ++++++     +LD   YS LI G C+ G ++ A      + R     +  +   +
Sbjct: 428 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 487

Query: 347 IHALCADGKMDKAHDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 488 VRGLFEEGMVVEADNAIQDL 507



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 153/282 (54%), Gaps = 1/282 (0%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PNV T+++++  LC  G++EEA  ++  M   G  PNA  YNTL+  FC  G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 181 VNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ A+ +   M   G  K N+ +++ ++NG CK   +EGA  ++ EM+ +G+ P VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G  ++  +  +  +F EM + G+  D   + + I   CK G + +A+ L   +R  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              ++  +++ LIDG CK G L  A      + +  +   VV YN +I+  C  G+MD A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +L  +MEAK V PD V ++T++ G  +        +L  +M
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 149/320 (46%), Gaps = 56/320 (17%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G +P+V+ Y+ LING C+ G   +A  L  EM     E   V KPD V Y+TII 
Sbjct: 211 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-----EAKRV-KPDVVTYSTIIS 264

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G CK G +D A +L  +M  K + PD +TY+S+IRG C     N+A  LF  M+  GVQP
Sbjct: 265 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 324

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-------------- 174
           +  T++ ++D  CK G +E+A  L + MI+ GV P+   Y+ L++G              
Sbjct: 325 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384

Query: 175 ------------------------------------FCLTGRVNRAKELFVSMESMGCKH 198
                                               FC+ G +  A +++ SM     K 
Sbjct: 385 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 444

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +   YSILI+G+C+   +  ALS + +ML  G  P   +  +L  GLFE   V  A    
Sbjct: 445 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504

Query: 259 DEMQRHGVAADTWAYRTFID 278
            ++      AD  A +  ID
Sbjct: 505 QDLLTCCPLADAEASKALID 524



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 56/222 (25%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +   G +P+  TY+TLI+G C+ G+   AL+L +EMI      GV+  PD V
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK----GVL--PDVV 362

Query: 62  IYTTIIDGL--------------------------------------------------C 71
            Y+ +I+GL                                                  C
Sbjct: 363 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 422

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
            +G + +A ++   M D+N   D   Y+ +I G C   +  +A     +M+  G  PN  
Sbjct: 423 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 482

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           +   ++  L + G + EA   ++ ++      +A     L+D
Sbjct: 483 STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 524


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 223/397 (56%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++  GC PN +TY+TL+   CR G     L+  E +++   E G   KP+ V
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE----LDGAERVVSLMREEGNA-KPNLV 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++GLCK G ++ A+++  +M  + + PDVV+YN+++ G+C     +E+  +F EM
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++   CK G +E+A  L+  M + G+R N   +  L+DGFC  G +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KP VVTY+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  L  
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +AH 
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   PD + ++ LML C    E   VV LL
Sbjct: 525 LLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALL 560



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 217/419 (51%), Gaps = 56/419 (13%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN++T+++++NGLC+ G    A  +F+EM+           PD V Y T++ G CK G 
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGC 273

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + ++  +  +M  + + PDVVT+ S+I   C A +  +A  L  +M ++G++ N VTF+ 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D  CK G +++A   +E M + G++P+   YN L++G+C  GR++ A+EL   ME+  
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K +V +YS +I+GYCK   ++ A  L  +ML KG+ P  +TY++L  GL E  ++  A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF+ M + GV  D + Y T IDG CK G + +AL L   +       D+ +YS LI+GL
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 316 CKSGRLKIA----WELFHSLP-------------------------------RGVLI-AD 339
            KS R K A    ++L+H  P                               +G++  AD
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 340 VV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            V               Y+I+IH  C  G + KA      M   G +P+  +  +L+ G
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 211/402 (52%), Gaps = 9/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDA 60
            A    + +   G  PNV TY+ L+  LC  G         EE +   G+  G  C P+A
Sbjct: 135 SARRFLSSMLRHGVAPNVYTYNILVRALCARGR-------LEEAVGVVGDMRGAGCAPNA 187

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V Y T++   C+ G +D A+ ++  M+++ N  P++VT+NS++ G C A     A+++F 
Sbjct: 188 VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFD 247

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G+ P+VV+++ ++   CK G + E+  +   M Q G+ P+   + +L+   C  G
Sbjct: 248 EMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAG 307

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            + +A  L   M   G + N  +++ LI+G+CK   ++ AL    EM   GI+P+VV YN
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYN 367

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  ++ +++ A +L  EM+   V  D   Y T I G CK G +  A +L + +   
Sbjct: 368 ALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 427

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +YS LI GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  +M  KGV PD V ++ L+ G  ++  T +   LL ++
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 205/380 (53%), Gaps = 21/380 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+ A+F+++   G  P+V+T+++LI+  C+ G+   A+ L  +M     E G+  + + V
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM----RERGL--RMNEV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDG CK+GF+D A   + +M+   I P VV YN++I G+C     + A+ L  EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VVT+S I+   CK G ++ A QL + M++ GV P+A  Y++L+ G C   R+
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ P VVTY+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF---------------IDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA ++++++     +LD   YS LI G C+ G ++ A      + R     +  +   +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629

Query: 347 IHALCADGKMDKAHDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 630 VRGLFEEGMVVEADNAIQDL 649



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 149/320 (46%), Gaps = 56/320 (17%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G +P+V+ Y+ LING C+ G   +A  L  EM     E   V KPD V Y+TII 
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM-----EAKRV-KPDVVTYSTIIS 406

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G CK G +D A +L  +M  K + PD +TY+S+IRG C     N+A  LF  M+  GVQP
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-------------- 174
           +  T++ ++D  CK G +E+A  L + MI+ GV P+   Y+ L++G              
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 175 ------------------------------------FCLTGRVNRAKELFVSMESMGCKH 198
                                               FC+ G +  A +++ SM     K 
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +   YSILI+G+C+   +  ALS + +ML  G  P   +  +L  GLFE   V  A    
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 259 DEMQRHGVAADTWAYRTFID 278
            ++      AD  A +  ID
Sbjct: 647 QDLLTCCPLADAEASKALID 666



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           ++++IR +      + A          G  P+V  ++ ++  L  +  +  A + L  M+
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV PN + YN L+   C  GR+  A  +   M   GC  N  +Y+ L+  +C+  E++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 218 GALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           GA  + S M  +G  KP +VT+N++  GL +  ++E A K+FDEM R G+A D  +Y T 
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGV 335
           + G CK G + E+L +F  +       D+ +++ LI   CK+G L+ A  L   +  RG+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 336 LI----------------------------------ADVVTYNIMIHALCADGKMDKAHD 361
            +                                    VV YN +I+  C  G+MD A +
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +MEAK V PD V ++T++ G  +        +L  +M
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 56/222 (25%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +   G +P+  TY+TLI+G C+ G+   AL+L +EMI      GV+  PD V
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK----GVL--PDVV 504

Query: 62  IYTTIIDGL--------------------------------------------------C 71
            Y+ +I+GL                                                  C
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
            +G + +A ++   M D+N   D   Y+ +I G C   +  +A     +M+  G  PN  
Sbjct: 565 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 624

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           +   ++  L + G + EA   ++ ++      +A     L+D
Sbjct: 625 STISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/448 (32%), Positives = 235/448 (52%), Gaps = 50/448 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A A+F ++   G +P+  TY+ LI+G   TG     + L EEM   + E      PD  
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLE------PDCF 410

Query: 62  IYTTIIDGLCKEG---------------------FVDKAKELLLQMKDKNINPDVVTYNS 100
           IY  ++D LCK G                      +D+A  +  +M+ + ++P+VV Y +
Sbjct: 411 IYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGA 470

Query: 101 VIR-----------------------GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +I                        G C      +A+ L  EM+DQG++ +VV F+ +M
Sbjct: 471 LIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLM 530

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
            +LC+ G++ EA +L+ELM+++GVRP+   YNTL+DG CLTGR + A +L   M S+G K
Sbjct: 531 CDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK 590

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N F+Y+ L++GYCK + I+ A SL  EML  G  P VVTYNT+  GLF+  +   A +L
Sbjct: 591 PNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           +  M       D + Y   ++GLCKN  + EA ++F++L     +L I +++ +I  L K
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G+ + A +LF ++    L+ DV TY ++   L  +G +++   LF  ME  G AP+   
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRM 770

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
            N L+   +   + S+    L ++DE+N
Sbjct: 771 LNALVRRFLHRGDISRAGAYLSKLDEKN 798



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 209/428 (48%), Gaps = 47/428 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++  FGC PNV++Y+TL+ G C       AL L   M +  G   + C PD V Y T
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQG---LSCPPDVVSYNT 309

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  +EG VDKA  L LQM D+ I PDVVTYN+VI G C A   + AK +F +M+D+G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+  T++ ++      GK +E  +LLE M    + P+ F+Y  L+D  C  GR   A+
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 186 ELFVS---------------------MESMGCKHNVFSYSILINGYCKNKEIEGAL---- 220
            +F S                     M   G   NV +Y  LI+  CK   ++ A+    
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFN 489

Query: 221 -------------------SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
                               L  EML +GI+  VV +NTL   L    +V  A +L + M
Sbjct: 490 QMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R GV  D  +Y T +DG C  G   EA +L   +  +  + +  +Y+ L+ G CK+ R+
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRI 609

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+ L   +       DVVTYN ++H L   G+  +A +L+L+M       D   +N +
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669

Query: 382 MLGCIRNN 389
           + G  +NN
Sbjct: 670 LNGLCKNN 677



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 208/472 (44%), Gaps = 97/472 (20%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP----DAVIYTTIIDGLCK 72
           P+  TYS LI   CR G           + +G   FG++ K     + +++  ++ GLC 
Sbjct: 193 PDRCTYSILIGCFCRMGR----------LEHGFAVFGLILKTGWRVNHIVFNQLLKGLCD 242

Query: 73  EGFVDKAKELLL-QMKDKNINPDVVTYNSVIRGFCYANDSNE------------------ 113
              +D+A  +LL +M +    P+VV+YN++++GFC  N + E                  
Sbjct: 243 AKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPP 302

Query: 114 --------------------AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
                               A  LF++M+D+G+ P+VVT++ ++D LCK   ++ A  + 
Sbjct: 303 DVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVF 362

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M+  GV+P+   YN L+ G+  TG+      L   M +   + + F Y++L++  CKN
Sbjct: 363 QQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKN 422

Query: 214 KE---------------------IEGALSLYSEMLSKGIKPTVVTYNTLF---------- 242
                                  I+ A+ ++ +M  +G+ P VV Y  L           
Sbjct: 423 GRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVD 482

Query: 243 -------------IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
                         GL  + + E+A +L  EM   G+  D   + T +  LC+ G ++EA
Sbjct: 483 DAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEA 542

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
             L   +  +    D+ SY+ L+DG C +GR   A +L   +    L  +  TYN ++H 
Sbjct: 543 QRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHG 602

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            C   ++D A+ L  +M   G  PD V +NT++ G  +    S+  EL   M
Sbjct: 603 YCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 51/365 (13%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD  TY+ +I  FC          +F  ++  G + N + F+ ++  LC   +++EA+
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 151 Q-LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMGCKHNVFSYSIL 206
             LL  M + G  PN   YNTL+ GFC   R   A EL   M   + + C  +V SY+ +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+ +  +++ A +L+ +M+ +GI P VVTYNT+  GL +   V+RA  +F +M   GV
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y   I G    G   E + L   +     E D   Y+ L+D LCK+GR   A  
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 327 LFHSLPR-GV--------------------LIADVVTYNIMIHALCADGKMD-------- 357
           +F S+ R G+                    L  +VV Y  +I ALC  G++D        
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 358 ---------------KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLH 399
                          KA +L  +M  +G+  D V FNTLM    R     E  +++EL+ 
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 400 RMDER 404
           R+  R
Sbjct: 551 RVGVR 555



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 5/265 (1%)

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           R+  E  D+ V P+  T+S+++   C+ G++E    +  L+++ G R N  V+N L+ G 
Sbjct: 182 RMVRECSDK-VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGL 240

Query: 176 CLTGRVNRAKELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIK- 232
           C   R++ A  + +  M   GC  NV SY+ L+ G+C     E AL L   M   +G+  
Sbjct: 241 CDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC 300

Query: 233 -PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VV+YNT+  G F   QV++A+ LF +M   G+  D   Y T IDGLCK   +  A  
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F+ +     +    +Y+CLI G   +G+ K    L   +    L  D   Y +++  LC
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCV 376
            +G+  +A ++F  +  KG+ PD +
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAM 445



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 157/319 (49%), Gaps = 10/319 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   +V+ ++TL+  LCR G  + A  L E M+       V  +PD + Y T++DG C  
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLR------VGVRPDVISYNTLVDGHCLT 571

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  D+A +LL  M    + P+  TYN+++ G+C A   ++A  L  EM+  G  P+VVT+
Sbjct: 572 GRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+  L + G+  EA +L   MI    + + + YN +++G C    V+ A ++F S+ S
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + ++ +++I+I    K  + E A+ L++ + + G+ P V TY  +   L +   +E 
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              LF  M+ +G A ++      +      G I  A      L      L+  + S LI 
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI- 810

Query: 314 GLCKSGRLKIAWELFHSLP 332
            L   G  +   +L  SLP
Sbjct: 811 SLYSRGEYQ---QLAKSLP 826



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  L   +   G  P+VI+Y+TL++G C TG T  A  L + M++      +  KP+ 
Sbjct: 540 MEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS------IGLKPNE 593

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G CK   +D A  LL +M      PDVVTYN+++ G       +EAK L++ 
Sbjct: 594 FTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLN 653

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   Q ++ T+++I++ LCKN  ++EA ++ + +   G++ +   +N ++      G+
Sbjct: 654 MINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGK 713

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P     N 
Sbjct: 714 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNA 773

Query: 241 LFIGLFEIHQVERA 254
           L         + RA
Sbjct: 774 LVRRFLHRGDISRA 787



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 6/221 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  ++   G  P+V+TY+T+++GL +TG    A  L+  MIN   ++      D  
Sbjct: 611 DAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW------DMY 664

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I++GLCK   VD+A ++   +  K +   ++T+N +I          +A  LF  +
Sbjct: 665 TYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+V T+ +I + L K G +EE   L   M + G  PN+ + N L+  F   G +
Sbjct: 725 SAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDI 784

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           +RA      ++         + S+LI+ Y + +  + A SL
Sbjct: 785 SRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSL 825


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/415 (33%), Positives = 220/415 (53%), Gaps = 29/415 (6%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G + N ++Y TLINGLC+TG T     L  ++       G   KPD V+Y TII  LC
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLC 214

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K   +  A +L  +M  K I+P+VVTYN+++ GFC      EA  L  EM  + + P+V 
Sbjct: 215 KNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVC 274

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+ ++D L K GKM+ A  +L +M++  ++P+   YN+L+DG+    +V  AK +F SM
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   NV +Y+ +I+G CK K ++ A+SL+ EM  K + P +VTY +L  GL + H +
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           ERA  L  +M+  G+  D ++Y   +D LCK G +  A E F+ L +    L++++Y+ +
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG- 370
           I+GLCK+     A +L   +     + D +T+  +I AL    + DKA  +  +M A+G 
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 371 ----------------------VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
                                 + PD V + TLM G    NE      + + M +
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 217/393 (55%), Gaps = 29/393 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF ++K     P+++TY++LI+GLC+  H   A+ L ++M     E G+  +PD  
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM----KEQGI--QPDVY 414

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D LCK G ++ AKE   ++  K  + +V TYN +I G C A+   EA  L  +M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 122 MDQGVQPNVVTFSVI----------------MDELCKNG-------KMEEASQLLELMIQ 158
             +G  P+ +TF  I                + E+   G       +++EA  +L +M +
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
             ++P+   Y TLMDG+ L   +  AK +F SM  MG   NV  Y+I+I+G CK K ++ 
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL+ EM  K + P +VTY +L   L + H +ERA  L  EM+ HG+  D ++Y   +D
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK+G +  A E+F+ L +    L+++ Y+ +I+ LCK+G    A +L   +     + 
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           D VT++I+I AL    + DKA  +  +M A+G+
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 224/463 (48%), Gaps = 65/463 (14%)

Query: 1   MEAAALFTKLKAFGC-EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           M+AA +   +    C +P+V+TY++LI+G         A  +F  M     + GV   P+
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM----AQSGVT--PN 342

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              YTT+IDGLCKE  VD+A  L  +MK KN+ PD+VTY S+I G C  +    A  L  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M +QG+QP+V ++++++D LCK G++E A +  + ++  G   N   YN +++G C   
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--------- 230
               A +L   ME  GC  +  ++  +I    +  E + A  +  EM+++G         
Sbjct: 463 LFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRL 522

Query: 231 --------------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                         IKP VVTY TL  G F +++++ A  +F  M + GV  +   Y   
Sbjct: 523 KEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIM 582

Query: 277 IDGLCKNGYIVEALELF-----------------------------RTLRILK------C 301
           IDGLCK   + EA+ LF                             R + +LK       
Sbjct: 583 IDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGI 642

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ SY+ L+DGLCKSGRL+ A E+F  L       +V  Y  MI+ LC  G  D+A D
Sbjct: 643 QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALD 702

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME KG  PD V F+ ++      +E  K  ++L  M  R
Sbjct: 703 LQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 211/458 (46%), Gaps = 64/458 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++   G  PNV+TY+ L+ G C  GH   A +L  EM   N        PD  
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN------INPDVC 274

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+ID L KEG +  AK +L  M    I PDVVTYNS+I G+ + N    AK +F  M
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334

Query: 122 MDQGVQPNV-----------------------------------VTFSVIMDELCKNGKM 146
              GV PNV                                   VT++ ++D LCKN  +
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A  L + M + G++P+ + Y  L+D  C  GR+  AKE F  +   G   NV +Y+++
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG- 265
           ING CK      A+ L S+M  KG  P  +T+ T+   LFE  + ++A K+  EM   G 
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 266 ----------------------VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
                                 +  D   Y T +DG      +  A  +F ++  +    
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +++ Y+ +IDGLCK   +  A  LF  +    +  ++VTY  +I ALC +  +++A  L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +M+  G+ PD  ++  L+ G  ++       E+  R+
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF K ++ G  P++ T + L+N  C   H   A ++   ++           P+A+   
Sbjct: 84  SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYH------PNAITLN 137

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC  G + KA     Q+  +    + V+Y ++I G C   ++    RL  ++   
Sbjct: 138 TLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGH 197

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV ++ I+  LCKN  + +A  L   MI  G+ PN   YN L+ GFC+ G +  A
Sbjct: 198 SVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEA 257

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M+      +V +++ LI+   K  +++ A  + + M+   IKP VVTYN+L  G
Sbjct: 258 FSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR------- 297
            F +++V+ A  +F  M + GV  +   Y T IDGLCK   + EA+ LF  ++       
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377

Query: 298 --------------------ILKC--------ELDIRSYSCLIDGLCKSGRLKIAWELFH 329
                               I  C        + D+ SY+ L+D LCK GRL+ A E F 
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            L       +V TYN+MI+ LC      +A DL   ME KG  PD + F T++      +
Sbjct: 438 RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKD 497

Query: 390 ETSKVVELLHRMDER 404
           E  K  ++L  M  R
Sbjct: 498 ENDKAEKILREMIAR 512



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L           L  + +     PD+ T N ++  FC+      A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              ++ +G  PN +T + ++  LC  G++++A    + ++  G + N   Y TL++G C 
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           TG       L   +E    K +V  Y+ +I+  CKNK +  A  LYSEM+ KGI P VVT
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  G   +  ++ AF L +EM+   +  D   + T ID L K G +  A  +   + 
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ +Y+ LIDG     ++K A  +F+S+ +  +  +V TY  MI  LC +  +D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  LF +M+ K + PD V + +L+ G  +N+   + + L  +M E+
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 130/286 (45%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+     P    F+ I+  L  N        L +     G  P+    N LM+ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              +  A  +  ++   G   N  + + LI G C   EI+ AL  + +++++G +   V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  GL +  + +   +L  +++ H V  D   Y T I  LCKN  + +A +L+  + 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     ++ +Y+ L+ G C  G LK A+ L + +    +  DV T+N +I AL  +GKM 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +   M    + PD V +N+L+ G    N+      + + M +
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 216/430 (50%), Gaps = 54/430 (12%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  + A G  PNV+TY TLI+G CR G  + A  LF+EMI           P  VIYT 
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTI 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC E  + +A+ +   M++  + P++ TYN+++ G+C      +A  L+ EM+  G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNVVTF +++D LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A 
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 186 ELFVSMESMGCKHNVFSYSI-----------------------------------LINGY 210
            L   +E      +VF+YSI                                   LI+GY
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E A+ + S+M  KGI+P ++T++TL  G  +  ++E A  L+ EM   G+  D 
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-- 328
            AY   IDG  K+G   EA  L + ++      ++ + SCLIDGLCK GR+  A +LF  
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533

Query: 329 -----------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                      + L R +   + V Y  +I  LC DG++ KA   F DM   G+ PD   
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593

Query: 378 FNTLMLGCIR 387
              ++ G  R
Sbjct: 594 CIVIIQGHFR 603



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 209/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ K+      P +   + +++GL + G       ++ +M+           P+ V
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS------PNVV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C++G   KA  L  +M +K I P VV Y  +IRG C  +  +EA+ +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ T++ +MD  CK   +++A +L + M+  G+ PN   +  L+DG C T  +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I P V TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +     
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I ++S LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A  
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +M+  G+ P+    + L+ G  ++   S  ++L 
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 196/391 (50%), Gaps = 11/391 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY-----------TTIIDGLCK 72
           ++ N L R   +    N+F  +I    E G+V +   V Y             ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G  D   ++   M  +  +P+VVTY ++I G C   D  +A RLF EM+++ + P VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +++++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C    V +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   NV ++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  E+++H +  D + Y   I GLC    + EA  L + ++      +  +Y+ LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK G ++ A E+   +    +  +++T++ +I   C  GKM+ A  L+ +M  KG+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD VA+  L+ G  ++  T +   L   M E
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 19/303 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L ++++     P+V TYS LI GLC       A  L +EM     + G +  P+AV
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFL--PNAV 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CKEG ++KA E+  QM +K I P+++T++++I G+C A     A  L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+VV ++ ++D   K+G  +EA +L + M + G+ PN F  + L+DG C  GR+
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 182 NRAKELFVS-------------MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + A +LF++             ++   C  N   Y+ LI G C +  I  A   +S+M  
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G++P V T   +  G F    +     L  ++ + G+  ++  YR    G  ++GY+  
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKS 644

Query: 289 ALE 291
           AL 
Sbjct: 645 ALR 647



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 5/323 (1%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +L +++     P+V  +  +I  F       EA  ++ +M    V P +   ++++D L 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G+ +   ++   M+  G  PN   Y TL+DG C  G   +A  LF  M        V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ILI G C    I  A S++  M + G+ P + TYNT+  G  +I  V++A +L+ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  +   +   IDGLCK   +V A +    +       +I  Y+CLIDG CK+G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  L   + +  ++ DV TY+I+I  LC   +M++A  L  +M+ KG  P+ V +NTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +     K +E+  +M E+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEK 432



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 145/281 (51%), Gaps = 23/281 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K  G  PN +TY+TLI+G C+ G+   A+ +  +M     E G+  +P+ +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNII 439

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T+IDG CK G ++ A  L  +M  K + PDVV Y ++I G     ++ EA RL  EM
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV---------------RPNAF 166
            + G+ PNV T S ++D LCK+G++ +A +L   + + G                 PN  
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHV 557

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  L+ G C  GR+ +A + F  M   G + +VF+  ++I G+ +   +   + L +++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           L  GI P    Y  L  G  E   ++ A +  +++   G+ 
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 195/327 (59%), Gaps = 6/327 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   GC+P+++TY  ++NGLC+ G T +ALNL  +M     E  VV      
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV------ 254

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+ID LCK    D A  L  +M++K + P+V+TY+S+I   C     ++A RL  +M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+VTFS ++D   K GK+ +A +L E MI+  + PN F Y++L++GFC+  R+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK++   M    C  NV +Y+ LING+CK K ++  + L+ EM  +G+    VTY TL
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    + A  +F +M   GV  +   Y   +DGLCKNG + +A+ +F  L+    
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF 328
           E DI +Y+ +I+G+CK+G+ K+    F
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 197/354 (55%), Gaps = 6/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G +P+ +T++TLI+GL        A+ L + M+         C+PD V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLV 219

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G  D A  LL +M+   I  +VV Y++VI   C     ++A  LF EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PNV+T+S ++  LC  G+  +AS+LL  MI+  + PN   ++ L+D F   G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A++L+  M       N+F+YS LING+C    +  A  +   M+ K   P VVTYNTL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V++  +LF EM + G+  +T  Y T I G  +      A  +F+ +  +  
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             +I +Y+ L+DGLCK+G+L  A  +F  L R  +  D+ TYNIMI  +C  GK
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 9/395 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K++  G   N+ TY+ LIN  CR     +AL L  +M+    E      PD V   ++++
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE------PDIVTLNSLLN 156

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G C    +  A  L+ QM +    PD VT+ ++I G    N ++EA  L   M+ +G QP
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++VT+  +++ LCK G  + A  LL  M    +  N  +Y+T++D  C     + A  LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             ME+ G + NV +YS LI+  C       A  L S+M+ + I P +VT++ L     + 
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++ +A KL++EM +  +  + + Y + I+G C    + EA ++   +    C  ++ +Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI+G CK+ R+    ELF  + +  L+ + VTY  +IH        D A  +F  M +
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSK---VVELLHR 400
            GV P+ + +N L+ G  +N + +K   V E L R
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 6/376 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+   G EP+++T ++L+NG C       A+ L ++M+    E G   KPD V +TT+I 
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV----EMGY--KPDTVTFTTLIH 191

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL       +A  L+ +M  +   PD+VTY +V+ G C   D++ A  L  +M    ++ 
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVV +S ++D LCK    ++A  L   M   GVRPN   Y++L+   C  GR + A  L 
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M       N+ ++S LI+ + K  ++  A  LY EM+ + I P + TY++L  G   +
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A ++ + M R     +   Y T I+G CK   + + +ELFR +       +  +Y
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI G  ++     A  +F  +    +  +++TYNI++  LC +GK+ KA  +F  ++ 
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491

Query: 369 KGVAPDCVAFNTLMLG 384
             + PD   +N ++ G
Sbjct: 492 STMEPDIYTYNIMIEG 507



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 44  EMINGNGEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
           E+ +  G FGV+ +    P  + ++ ++  + K    D       +M+   I+ ++ TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            +I  FC  +  + A  L  +MM  G +P++VT + +++  C   ++ +A  L++ M+++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G +P+   + TL+ G  L  + + A  L   M   GC+ ++ +Y  ++NG CK  + + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L+L ++M +  I+  VV Y+T+   L +    + A  LF EM+  GV  +   Y + I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LC  G   +A  L   +   K   ++ ++S LID   K G+L  A +L+  + +  +  +
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           + TY+ +I+  C   ++ +A  +   M  K   P+ V +NTL+ G  +     K +EL  
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 400 RMDER 404
            M +R
Sbjct: 418 EMSQR 422



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 148/308 (48%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  V+R      + ++A  LF  M      P+++ FS ++  + K  K +      E M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+  N + YN L++ FC   R++ A  L   M  +G + ++ + + L+NG+C    I 
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G KP  VT+ TL  GLF  ++   A  L D M + G   D   Y   +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLCK G    AL L   +   K E ++  YS +ID LCK      A  LF  +    + 
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +V+TY+ +I  LC  G+   A  L  DM  + + P+ V F+ L+   ++  +  K  +L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 398 LHRMDERN 405
              M +R+
Sbjct: 346 YEEMIKRS 353



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 6/190 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L+ ++     +PN+ TYS+LING C       A  + E MI  +      C P+ 
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD------CLPNV 393

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   VDK  EL  +M  + +  + VTY ++I GF  A D + A+ +F +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++T+++++D LCKNGK+ +A  + E + +  + P+ + YN +++G C  G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513

Query: 181 VNRAKELFVS 190
                  FV+
Sbjct: 514 WKMGGIYFVA 523



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 6/213 (2%)

Query: 196 CKHNVFS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           C+   FS      Y  ++     + E++ A+ L+  M      P+++ ++ L   + +++
Sbjct: 33  CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           + +      ++M+  G++ + + Y   I+  C+   +  AL L   +  L  E DI + +
Sbjct: 93  KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L++G C   R+  A  L   +       D VT+  +IH L    K  +A  L   M  +
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           G  PD V +  ++ G  +  +T   + LL++M+
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 223/397 (56%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++  GC PN +TY+TL+   CR G     L+  E +++   E G   KP+ V
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE----LDGAERVVSLMREEGNA-KPNLV 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++GLCK G ++ A+++  +M  + + PDVV+YN+++ G+C     +E+  +F EM
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++   CK G +E+A  L+  M + G+R N   +  L+DGFC  G +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KP VVTY+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  L  
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +AH 
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   PD + ++ LML C    E   VV LL
Sbjct: 525 LLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALL 560



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 217/419 (51%), Gaps = 56/419 (13%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN++T+++++NGLC+ G    A  +F+EM+           PD V Y T++ G CK G 
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGC 273

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + ++  +  +M  + + PDVVT+ S+I   C A +  +A  L  +M ++G++ N VTF+ 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D  CK G +++A   +E M + G++P+   YN L++G+C  GR++ A+EL   ME+  
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            K +V +YS +I+GYCK   ++ A  L  +ML KG+ P  +TY++L  GL E  ++  A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF+ M + GV  D + Y T IDG CK G + +AL L   +       D+ +YS LI+GL
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 316 CKSGRLKIA----WELFHSLP-------------------------------RGVLI-AD 339
            KS R K A    ++L+H  P                               +G++  AD
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 340 VV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            V               Y+I+IH  C  G + KA      M   G +P+  +  +L+ G
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRG 632



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 211/401 (52%), Gaps = 9/401 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDAV 61
           A    + +   G  PNV TY+ L+  LC  G         EE +   G+  G  C P+AV
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGR-------LEEAVGVVGDMRGAGCAPNAV 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y T++   C+ G +D A+ ++  M+++ N  P++VT+NS++ G C A     A+++F E
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P+VV+++ ++   CK G + E+  +   M Q G+ P+   + +L+   C  G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M   G + N  +++ LI+G+CK   ++ AL    EM   GI+P+VV YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ +++ A +L  EM+   V  D   Y T I G CK G +  A +L + +    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +YS LI GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  KGV PD V ++ L+ G  ++  T +   LL ++
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 205/380 (53%), Gaps = 21/380 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+ A+F+++   G  P+V+T+++LI+  C+ G+   A+ L  +M     E G+  + + V
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM----RERGL--RMNEV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDG CK+GF+D A   + +M+   I P VV YN++I G+C     + A+ L  EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VVT+S I+   CK G ++ A QL + M++ GV P+A  Y++L+ G C   R+
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ P VVTY+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF---------------IDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA ++++++     +LD   YS LI G C+ G ++ A      + R     +  +   +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629

Query: 347 IHALCADGKMDKAHDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 630 VRGLFEEGMVVEADNAIQDL 649



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 206/389 (52%), Gaps = 8/389 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V  Y+ ++  L     +  +L      ++     GV   P+   Y  ++  LC  
Sbjct: 113 GYAPSVPAYNAVLLAL-----SDASLPSARRFLSSMLRHGVA--PNVYTYNILVRALCAR 165

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVT 132
           G +++A  ++  M+     P+ VTYN+++  FC A + + A+R+   M ++G  +PN+VT
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+ +++ LCK G+ME A ++ + M++ G+ P+   YNTL+ G+C  G ++ +  +F  M 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +V +++ LI+  CK   +E A++L ++M  +G++   VT+  L  G  +   ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A    +EM++ G+      Y   I+G CK G +  A EL R +   + + D+ +YS +I
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G CK G L  A++L   + +  ++ D +TY+ +I  LC + +++ A +LF +M   GV 
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD   + TL+ G  +     K + L   M
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEM 494



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 147/320 (45%), Gaps = 56/320 (17%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G +P+V+ Y+ LING C+ G   +A  L  EM           KPD V Y+TII 
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIIS 406

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G CK G +D A +L  +M  K + PD +TY+S+IRG C     N+A  LF  M+  GVQP
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-------------- 174
           +  T++ ++D  CK G +E+A  L + MI+ GV P+   Y+ L++G              
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526

Query: 175 ------------------------------------FCLTGRVNRAKELFVSMESMGCKH 198
                                               FC+ G +  A +++ SM     K 
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +   YSILI+G+C+   +  ALS + +ML  G  P   +  +L  GLFE   V  A    
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 259 DEMQRHGVAADTWAYRTFID 278
            ++      AD  A +  ID
Sbjct: 647 QDLLTCCPLADAEASKALID 666



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           ++++IR +      + A          G  P+V  ++ ++  L  +  +  A + L  M+
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV PN + YN L+   C  GR+  A  +   M   GC  N  +Y+ L+  +C+  E++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 218 GALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           GA  + S M  +G  KP +VT+N++  GL +  ++E A K+FDEM R G+A D  +Y T 
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGV 335
           + G CK G + E+L +F  +       D+ +++ LI   CK+G L+ A  L   +  RG+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 336 LI----------------------------------ADVVTYNIMIHALCADGKMDKAHD 361
            +                                    VV YN +I+  C  G+MD A +
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +MEAK V PD V ++T++ G  +        +L  +M
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 231/433 (53%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG------VV 55
           EA ++F  +   G +PN   Y  L++G    G  I   +L + MI     F       ++
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                       +PD V Y+T+I  LCK G V+ A     QM  + ++
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++++ S+I G C   +  + + L  EM+++G+ P+ +  + IMD LCK G++ EA   
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +++I IGV+PN   YNTL+DG+C  G+++ + + F  M S+G + + ++Y+ L+NGY K
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  +E AL+LY EM  K +K   +T N +  GLF+  ++  A +L+ +M   G       
Sbjct: 566 NGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIET 625

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GLC+N  + EAL +F  LR  + ELD+ +++ +I+ L K GR+  A  LF ++ 
Sbjct: 626 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               +  V+TY++MI +   +G ++++ DLFL ME  G A D    N ++   +   +  
Sbjct: 686 LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR 745

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 746 RAGTYLTKIDEKN 758



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 223/441 (50%), Gaps = 44/441 (9%)

Query: 2   EAAALFTKLKA---FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           EA  L   + A   + C PNV++YST+I+G  + G    A  LF+EMI G G       P
Sbjct: 183 EALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMI-GQG-----FPP 236

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D V Y+++IDGLCK   ++KA+ +L  M DK + P+  TYN +IRG+C      EA RL 
Sbjct: 237 DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLL 296

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+QP+VVT+ +++   CK G+  EA  + + M++ G +PN+ +Y+ L+ G+   
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 356

Query: 179 GR-----------------------------------VNRAKELFVSMESMGCKHNVFSY 203
           G                                    V++A   F  M   G + +V SY
Sbjct: 357 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSY 416

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I+  CK   +E A+  +++M+S+G+ P ++++ +L  GL  I + ++  +L  EM  
Sbjct: 417 STVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN 476

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G+  D     T +D LCK G +VEA + F  +  +  + ++ SY+ LIDG C  G++  
Sbjct: 477 RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDE 536

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           + + F  +    L  D  TYN +++    +G+++ A  L+ +M  K V    +  N ++ 
Sbjct: 537 SIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILH 596

Query: 384 GCIRNNETSKVVELLHRMDER 404
           G  +        EL  +M +R
Sbjct: 597 GLFQAGRIVAARELYMKMVDR 617



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 213/431 (49%), Gaps = 38/431 (8%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F ++   G  P+V +Y+ LI GLC    +  AL L   M     + G  C P+ V Y+T
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM---TADGGYNCSPNVVSYST 208

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IIDG  KEG VDKA  L  +M  +   PDVVTY+S+I G C A   N+A+ +   M D+G
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T+++++   C  G++EEA +LL+ M   G++P+   Y  L+  +C  GR   A+
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILING-----------------------------------Y 210
            +F SM   G K N   Y IL++G                                   Y
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K+  ++ A++ ++EM   G++P VV+Y+T+   L +I +VE A   F++M   G++ + 
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            ++ + I GLC  G   +  EL   +       D    + ++D LCK GR+  A + F  
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 508

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  +VV+YN +I   C  GKMD++   F  M + G+ PD   +N L+ G  +N  
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGR 568

Query: 391 TSKVVELLHRM 401
               + L   M
Sbjct: 569 VEDALALYREM 579



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 4/307 (1%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQI 159
           +IR FC     + A   F   +  G +   VT + ++  LC   + ++A  ++   M ++
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG---CKHNVFSYSILINGYCKNKEI 216
           G  P+ F YN L+ G C+  +   A EL + M + G   C  NV SYS +I+G+ K  E+
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  L+ EM+ +G  P VVTY++L  GL +   + +A  +   M   GV  +T  Y   
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I G C  G + EA+ L + +     + D+ +Y  LI   CK GR   A  +F S+ R   
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             +   Y+I++H     G +    DL   M   G+  +  AFN L+    ++    K + 
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 397 LLHRMDE 403
               M +
Sbjct: 400 AFTEMRQ 406



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 143/338 (42%), Gaps = 49/338 (14%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE-------ASQLLELMIQIGVR--- 162
           +A  LF E++ Q    +V  F+ ++  + +             A  L   M + GV    
Sbjct: 32  DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMA 91

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKE------------------------------------ 186
            N ++   L+  FC  GR++ A                                      
Sbjct: 92  ANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDM 151

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVVTYNTLFI 243
           +F  M  +G   +VFSY+ LI G C  K+ + AL L   M + G     P VV+Y+T+  
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G F+  +V++A+ LFDEM   G   D   Y + IDGLCK   + +A  + + +       
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           + R+Y+ +I G C  G+L+ A  L   +    L  DVVTY ++I   C  G+  +A  +F
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             M  KG  P+   ++ L+ G         V +LL  M
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F  +   G +PNV++Y+TLI+G C  G    ++  F+ M++      +  +PD+
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS------IGLRPDS 553

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +++G  K G V+ A  L  +M  K++    +T N ++ G   A     A+ L+++
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMK 613

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G Q  + T++ ++  LC+N  ++EA ++ E +       + + +N +++     GR
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ AK LF +M   G   +V +YS++I    +   +E +  L+  M   G        N 
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNV 733

Query: 241 LFIGLFEIHQVERA 254
           +   L E   V RA
Sbjct: 734 IIRRLLEKGDVRRA 747



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 49/234 (20%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI-------HQVERAFKLFDEMQRHGV--- 266
           E AL+L+ E+L +    +V  +N++   +          H    A  LF+ M R GV   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 267 AADTW----------------------------AYRT-------FIDGLCKNGYIVEALE 291
           AA+ +                             +R         I GLC      +A++
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 292 L-FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVL--IADVVTYNIMI 347
           + FR +  L    D+ SY+ LI GLC   + + A EL  H    G      +VV+Y+ +I
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
                +G++DKA+ LF +M  +G  PD V +++L+ G  +    +K   +L  M
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 229/437 (52%), Gaps = 36/437 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG----------- 50
           EAA  F  + A G +P+++TYS L++G    G+ +  LNLF  M  GNG           
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM-EGNGIVADHSVYNIL 408

Query: 51  ---------------------EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                                E GV+  PDA  Y T+I    + G +  A +   QM   
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVM--PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEE 148
            + PD + YNS+I+GFC   +  +AK L  EMM +G+ +PN V F+ I++ LCK G++ E
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A  + +L+I IG RP+   +N+L+DG+ L G++ +A  +  +M S+G + +V +YS L++
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           GYC+N  I+  L L+ EMLSKG+KPT +TY  +  GLF   +   A K+  EM   G   
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D       + GLC+N    EA+ LF+ L  +  + +I   + +ID + K  + + A ELF
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELF 706

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
            S+    L+ +  TY +MI  L  +G +++A ++F  ME  G AP     N ++   +  
Sbjct: 707 DSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEK 766

Query: 389 NETSKVVELLHRMDERN 405
            E SK    L ++D + 
Sbjct: 767 GEISKAGNYLSKVDGKT 783



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 209/466 (44%), Gaps = 77/466 (16%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K+ GC PNV++Y+T+I+G  R G    A NLF EM+    + GVV  PD V Y++ ID L
Sbjct: 219 KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMM----QQGVV--PDVVTYSSYIDAL 272

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA+ +L QM      PD VTYN +I G+       E   +F EM  +G+ P++
Sbjct: 273 CKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            T +  M  LCK+GK +EA++  + M   G +P+   Y+ L+ G+   G V     LF S
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           ME  G   +   Y+ILI+ Y K   ++ A+ ++++M  +G+ P   TY T+      + +
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDG------------------------------- 279
           +  A   F++M   G+  DT  Y + I G                               
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512

Query: 280 -----LCKNGYIVEALELF-----------------------------RTLRILKC---- 301
                LCK G +VEA ++F                             +   +L      
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572

Query: 302 --ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E D+ +YS L+DG C++GR+     LF  +    +    +TY I++H L  DG+   A
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  +M   G   D      ++ G  RNN   + + L  ++   N
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 199/381 (52%), Gaps = 8/381 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF +    G + +VI  + L+  LC    +  A+N+   +++   E GV  +PD + Y+
Sbjct: 140 ALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV---LLHRMPELGV--EPDTISYS 194

Query: 65  TIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           T++  LC++    +A +LL  M  K    +P+VV+YN+VI GF    + ++A  LF EMM
Sbjct: 195 TVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMM 254

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QGV P+VVT+S  +D LCK   M++A  +L  MI  G  P+   YN ++ G+ + G+  
Sbjct: 255 QQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWK 314

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               +F  M   G   ++F+ +  ++  CK+ + + A   +  M +KG KP +VTY+ L 
Sbjct: 315 ETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLL 374

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G      V     LF+ M+ +G+ AD   Y   ID   K G + EA+ +F  ++     
Sbjct: 375 HGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVM 434

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y  +I    + GRL  A + F+ +    L  D + YN +I   C  G + KA +L
Sbjct: 435 PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKEL 494

Query: 363 FLDMEAKGVA-PDCVAFNTLM 382
             +M ++G+  P+ V FN+++
Sbjct: 495 ISEMMSRGIPRPNTVFFNSII 515



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+V+TYS+ I+ LC+      A  +  +MI+   E      PD V
Sbjct: 245 KACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE------PDKV 298

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G    G   +   +  +M  + + PD+ T NS +   C    S EA   F  M
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P++VT+SV++      G + +   L   M   G+  +  VYN L+D +   G +
Sbjct: 359 AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  M+  G   + ++Y  +I  + +   +  A+  +++M++ G+KP  + YN+L
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM   G+   +T  + + I+ LCK G +VEA ++F  +  + 
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +++ LIDG    G+++ A+ +  ++    +  DVVTY+ ++   C +G++D   
Sbjct: 539 ERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGL 598

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M +KGV P  + +  ++ G   +  T    ++ H M E
Sbjct: 599 ILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 177/354 (50%), Gaps = 5/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F ++ A G +P+ I Y++LI G C  G+ + A  L  EM++       + +P+ V
Sbjct: 455 DAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG-----IPRPNTV 509

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +II+ LCKEG V +A+++   +      PDV+T+NS+I G+       +A  +   M
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P+VVT+S ++D  C+NG++++   L   M+  GV+P    Y  ++ G    GR 
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK++   M   G   ++ +  I++ G C+N   + A++L+ ++ +  +K  +   NT+
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              ++++ + E A +LFD +   G+  +   Y   I  L K G + EA  +F  +    C
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
               R  + +I  L + G +  A      +    +  +  T ++M+      GK
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 38/347 (10%)

Query: 93  PDVVTYNSVIR----------GF-------------------------CYANDSNEAKRL 117
           P V TYN ++           GF                         C+A  S++A  +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI--GVRPNAFVYNTLMDG 174
            +  M + GV+P+ +++S ++  LC++ + + A  LL  M++   G  PN   YNT++ G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   G V++A  LF  M   G   +V +YS  I+  CK + ++ A  +  +M+S G +P 
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYN +  G   + Q +    +F EM R G+  D +   +++  LCK+G   EA E F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           ++     + D+ +YS L+ G    G +     LF+S+    ++AD   YNI+I A    G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            MD+A  +F  M+ +GV PD   + T++    R    +  ++  ++M
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  +   G  P+VIT+++LI+G    G    A  + + MI+      V  +PD 
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS------VGIEPDV 578

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ ++DG C+ G +D    L  +M  K + P  +TY  ++ G      +  AK++  E
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ T  +I+  LC+N   +EA  L + +  + V+ N  + NT++D      +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A ELF S+ + G   N  +Y ++I    K   +E A +++S M   G  P+    N 
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 759 IIRVLLEKGEISKA 772



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEALELFRTLRILKC 301
             E    LFDE+ R        A   F+  L        C++G  + A+ LF   RI + 
Sbjct: 52  STEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSL-AVALFN--RICRE 108

Query: 302 ELDIR-------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           E   R       +Y+ L+D  C++ R  + + LF    +  L  DV+  NI++  LC   
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168

Query: 355 KMDKAHDLFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + D A ++ L  M   GV PD ++++T++     ++ + + ++LLH M +++
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS 220



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF KL A   + N+   +T+I+ + +      A  LF+ +       G+V  P+A 
Sbjct: 666 EAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI----SATGLV--PNAS 719

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  L KEG V++A  +   M+     P     N++IR      + ++A     ++
Sbjct: 720 TYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKV 779

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             + +     T S+++    + GK  E  + L  M Q
Sbjct: 780 DGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 218/405 (53%), Gaps = 9/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G EPNV+ YS L++G C+TG       +FEEM +G G      +PD V+
Sbjct: 148 AVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM-SGRG-----IEPDVVM 201

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +ID LC+ G V KA  ++  M ++ + P+VVTYN +I   C      EA  L   M 
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGR 180
           ++GVQP+VVT++ ++  L    +M+EA  LLE M+Q    VRP+   +N+++ G C  G 
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW 321

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A ++   M   GC+ N+ ++++LI G  +  +++ A+ L  EM S G++P   TY+ 
Sbjct: 322 MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSI 381

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ QVERA     EM+  G+  +   Y   +  +C  G + +A +LF  +    
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RN 440

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+LD  +YS +I G  KSG  KIA E    +    LI D VTY+I I+     G +  A 
Sbjct: 441 CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAE 500

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +   M A G  PD   F++L+ G     +T K++EL   M  ++
Sbjct: 501 RVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKD 545



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 214/403 (53%), Gaps = 8/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+ AL + L +     + ++Y+T++  LCR G    AL L   M   + E  +  +P+A+
Sbjct: 42  ESPALLSALPSVR---DAVSYNTVLAALCRQGCLDAALFLLRVM---SHEPRLASRPNAI 95

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++  LC +    +A  LL  M+D  + PDVVTY ++IRG C A D + A  L  EM
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PNVV +S ++   CK G+ E   ++ E M   G+ P+  +Y  L+D  C  G+V
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +   M   G + NV +Y++LIN  CK   +  AL L   M  KG++P VVTYNTL
Sbjct: 216 KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275

Query: 242 FIGLFEIHQVERAFKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             GL  + +++ A  L +EM +    V  D   + + I GLCK G++ +AL++   +   
Sbjct: 276 ITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN 335

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  ++ +++ LI GL +  ++K A EL   +    L  D  TY+I+I+  C   ++++A
Sbjct: 336 GCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERA 395

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
                +M  +G+ P+ V +  L+          +  +L + MD
Sbjct: 396 ESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD 438



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 44/268 (16%)

Query: 178 TGRVNRAKELFVSMES------MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-- 229
             R+NR   L    ES      +    +  SY+ ++   C+   ++ AL L   M  +  
Sbjct: 28  AARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPR 87

Query: 230 -GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
              +P  ++Y TL   L    +  +A  L   MQ  GV  D   Y T I GLC    +  
Sbjct: 88  LASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDT 147

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGV------------ 335
           A+EL   +     E ++  YSCL+ G CK+GR +   ++F  +  RG+            
Sbjct: 148 AVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALID 207

Query: 336 ----------------------LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
                                 L  +VVTYN++I+++C +G + +A DL  +M  KGV P
Sbjct: 208 SLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V +NTL+ G     E  + + LL  M
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEM 295


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/401 (33%), Positives = 217/401 (54%), Gaps = 29/401 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E     KPD 
Sbjct: 98  VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EELSHIKPDV 152

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGL K+G    A+ L ++M+DK I PD+VTY+ +I GFC +   +EA+RL  E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+VVTFS +++ L K G +  A  LL+ MI  GV PN    NTL+DG C +G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+F +M+                        +  + + +     G++P V TYN 
Sbjct: 273 LKDALEMFKAMQ------------------------KSMMDIDATHAFNGVEPDVQTYNI 308

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    +   A +L++EM   G+  DT  Y + I+GLCK   + EA ++F ++    
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +I +++ LI G CK+G +    ELF  + R  ++A+ +TY  +I      G ++ + 
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+F +M + GV PD +    ++ G     E  K + +L  +
Sbjct: 429 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 210/394 (53%), Gaps = 22/394 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F KL   G  P ++T++TL++GLC       AL+LF +M          CKP+ V 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----------CKPNVVT 83

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+++GLC+EG V +A  LL +M +  + P+ +TY +++ G C   D+  A  L  +M 
Sbjct: 84  FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 123 D-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++P+VV +S I+D L K+G+  +A  L   M   G+ P+   Y+ +++GFC +G+ 
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L   M       +V ++S LIN   K  ++  A  L  EM+S G+ P VVT NTL
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 242 FIGLFEIHQVERAFKLFDEMQR-----------HGVAADTWAYRTFIDGLCKNGYIVEAL 290
             GL +  +++ A ++F  MQ+           +GV  D   Y   I GL   G  +EA 
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           EL+  +       D  +YS +I+GLCK  RL  A ++F S+       ++VT+N +I   
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           C  G +D   +LF +M  +G+  + + + TL+ G
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 22/399 (5%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ +++ LI   C       AL+ F ++     + G    P  V + T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A +L  QM      P+VVT+ +++ G C      EA  L   M++ G+QPN +T+  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 DELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           D +CK G    A  LL  M ++  ++P+  +Y+ ++DG    GR   A+ LF+ M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++ +YS +ING+C + +   A  L  EML + I P VVT++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-----------ILKCELDI 305
           L  EM   GV  +     T +DGLC +G + +ALE+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
           ++Y+ LI GL   G+   A EL+  +P   ++ D VTY+ MI+ LC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M +K  +P+ V FNTL+ G  +       +EL   M  R
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 175/326 (53%), Gaps = 16/326 (4%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P +VT+N+++ G C  +  +EA  LF +M     +PNVVTF+ +M+ LC+ G++ EA  
Sbjct: 47  HPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVA 102

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGY 210
           LL+ M++ G++PN   Y T++DG C  G    A  L   ME +   K +V  YS +I+G 
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K+     A +L+ EM  KGI P +VTY+ +  G     +   A +L  EM    ++ D 
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +   I+ L K G +  A +L + +       ++ + + L+DGLC SG+LK A E+F +
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 331 LPRGVLI-----------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           + + ++             DV TYNI+I  L  +GK  +A +L+ +M  +G+ PD V ++
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           +++ G  + +   +  ++   M  ++
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKS 368



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 142/272 (52%), Gaps = 17/272 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++      P+V+T+S LIN L + G    A +L +EMI+       VC P+ V
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VC-PNVV 258

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-----------NINPDVVTYNSVIRGFCYAND 110
              T++DGLC  G +  A E+   M+              + PDV TYN +I G      
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             EA+ L+ EM  +G+ P+ VT+S +++ LCK  +++EA+Q+ + M      PN   +NT
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G+C  G V+   ELF  M   G   N  +Y  LI G+ K   I G+L ++ EM+S G
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           + P  +T   +  GL+   ++++A  + +E+Q
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  244 bits (622), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 219/402 (54%), Gaps = 8/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + + GC PNV+TYS LINGLC+ G    A  L +EM   + +      P+ +
Sbjct: 134 EARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN--INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y + +DGLCK+    +A EL+  ++D +  ++PD VT++++I G C    ++EA     
Sbjct: 190 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--D 247

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNVVT++ +++ LCK  KME A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV+ A EL   M S GC  NV +++ +I+G CK+     A  +  ++ ++ + P  VT+N
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  +    E+A  LF+EM    +  D   +   IDGLCK G +  A ++   +  L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++ +Y+ L+ GLCKSGR++   E    +     + + +TY  +++ALC   + D A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L   +++ G  PD V +N L+ G  ++ +T + + +L  M
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 529



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 220/400 (55%), Gaps = 12/400 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +L   G  P+V+TY+TLI+ LC+ G    A  L   M +        C P+ V Y+ 
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG------CVPNVVTYSV 156

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN--PDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           +I+GLCK G +D+A+EL+ +M  K+ +  P+++TYNS + G C  + + EA  L   + D
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 124 QG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+ VTFS ++D LCK G+ +EA    + MI  G  PN   YN L++G C   ++
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P VVT+N++
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   AF++  ++    +  D   +   I G CK G   +A  LF  +     
Sbjct: 335 IDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ ++  LIDGLCK+G+++ A ++   +    +  +VVTYN+++H LC  G++++  +
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCE 454

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +M + G  P+ + + +L+    R + T   ++L+ ++
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL 494



 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 208/388 (53%), Gaps = 11/388 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V  Y+ ++  LCR G T  AL +F   +  +G       P  V Y TII+GLCK   + 
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDG-----VAPTIVTYNTIINGLCKSNELG 98

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
              EL  ++  +  +PDVVTYN++I   C A D  EA+RL   M  +G  PNVVT+SV++
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 138 DELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--S 193
           + LCK G+++EA +L++ M +    V PN   YN+ +DG C       A EL  S+   S
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 218

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +    +  ++S LI+G CK  + + A +   +M++ G  P VVTYN L  GL +  ++ER
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M   GV  D   Y   +D  CK   + EALEL   +    C  ++ +++ +ID
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCKS R   A+++   +   +L+ D VT+NI+I   C  G  ++A  LF +M AK + P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D + F  L+ G  +  +     ++L  M
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLM 424



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 167/312 (53%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A A+   +   G  P+VITYS L++  C+      AL    E+++G    G  C P+ V
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL----ELLHGMASRG--CTPNVV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +IIDGLCK     +A ++ LQ+ ++ + PD VT+N +I G C A +  +A  LF EM
Sbjct: 330 TFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + +QP+V+TF  ++D LCK G++E A  +L+LM  +GV PN   YN L+ G C +GR+
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E    M S GC     +Y  L+   C+    + AL L S++ S G  P  VTYN L
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL++  + E+A  + +EM   G   D++ +     GL ++G +   +EL R +     
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGM 569

Query: 302 ELDIRSYSCLID 313
             D  + S ++D
Sbjct: 570 LPDATTCSSILD 581


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 212/392 (54%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+   Y+ LI    + G    A+ +F +M            PDAV Y  +I  LCK 
Sbjct: 336 GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG------LNPDAVTYGAVIGILCKS 389

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I G C  N    A+ L +EM+D+G+  N + F
Sbjct: 390 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 449

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L   M S
Sbjct: 450 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS 509

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K N  +Y  LINGYCK   +  AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 510 VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 569

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    +AL +F+ L ++  +L+ R+++ +ID
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 629

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +     L+ +  TY +M   +   G +++   LFL ME  G   
Sbjct: 630 ALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 689

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D    N ++   ++  E ++    L  +DE++
Sbjct: 690 DSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 215/438 (49%), Gaps = 43/438 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++    C P+V + + L+ GLC    +  AL L   M +G G       PD V YTT
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA---PDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG   KA     +M D+ I+PDVVTY+S+I   C     ++A  +   M+  G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 126 VQPNVVTFSVIMDELCKNGKMEEA------------------------------------ 149
           V PN  T++ IM   C +G+ +EA                                    
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 150 ----SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                 LL+LM++ G+ P+ +VYN L+  +   G+V+ A  +F  M   G   +  +Y  
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I   CK+  +E A+  + +M+ +G+ P  + YN+L  GL   ++ ERA +L  EM   G
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +T  + + ID  CK G ++E+ +LF  +  +  + DI +YS LIDG C +G++  A 
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   +    L  + VTY  +I+  C   +M  A  LF +ME+ GV+PD + +N ++ G 
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGL 561

Query: 386 IRNNETSKVVELLHRMDE 403
            +   T+   EL  R+ E
Sbjct: 562 FQTRRTAAAKELYVRITE 579



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 198/393 (50%), Gaps = 4/393 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+  F + +  +G      +PD  
Sbjct: 249 KAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIG-FLKKVRSDGVEPDGLEPDIA 307

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G +     LL  M    I+PD   YN +I  +      +EA  +F +M
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM 367

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 368 RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP ++TY+TL
Sbjct: 428 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  +T  YRT I+G CK   + +AL LF+ +     
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGV 547

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  
Sbjct: 548 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALR 607

Query: 362 LFLDMEAKGVAPDCVAFNTL---MLGCIRNNET 391
           +F ++    +  +   FN +   +L   RN E 
Sbjct: 608 MFQNLCLMDLKLEARTFNIMIDALLKVGRNGEA 640



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 6/285 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A+ L   M++      V  KP+ 
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 516

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   +  A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   ++A ++ + +  + ++  A  +N ++D     GR
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 636

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AK+LFV+  S G   N ++Y ++         +E    L+  M   G        N 
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 696

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 697 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 741



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 167/391 (42%), Gaps = 47/391 (12%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I   C+   +D     L  +  K    + +T+  +++G C    +++A  +
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 118 FIEMMDQ---------------------------------------GVQPNVVTFSVIMD 138
            +  M +                                       G  P+VV+++ +++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
              K G   +A      M+   + P+   Y++++   C    +++A E+  SM   G   
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-----KPTVVTYNTLFIGLFEIHQVER 253
           N  +Y+ +++GYC + + + A+    ++ S G+     +P + TY TL  G      +  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              L D M R+G+  D + Y   I    K G + EA+ +F  +R      D  +Y  +I 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCKSGR++ A   F  +    L    + YN +IH LC   K ++A +L L+M  +G+  
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 374 DCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
           + + FN+++    +     E+ K+ +L+ R+
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 475



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 11/290 (3%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P V T+++++   C+  +++     L  +++ G R  A  +  L+ G C   R + A 
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPTVVTYNTL 241
           ++ +  M  + C  +VFS +IL+ G C     + AL L   M      G  P VV+Y T+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+     +A+  + EM    ++ D   Y + I  LCK   + +A+E+  ++     
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIADVVTYNIMIHALCADGK 355
             + R+Y+ ++ G C SG+ K A      +      P G L  D+ TY  ++      G 
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDG-LEPDIATYCTLLQGYATKGA 321

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   H L   M   G+ PD   +N L+    +  +  + + +  +M ++ 
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 7/191 (3%)

Query: 218 GALSLYSEMLSKG---IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            A+S Y+ M   G   + PTV TY  L        +++  F     + + G   +   + 
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 275 TFIDGLCKNGYIVEALEL-FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             + GLC +    +A+++  R +  L C  D+ S + L+ GLC   R + A EL H +  
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMAD 186

Query: 334 GV---LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           G       DVV+Y  +I+    +G   KA+  + +M  + ++PD V +++++    +   
Sbjct: 187 GRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 391 TSKVVELLHRM 401
             K +E+L  M
Sbjct: 247 MDKAMEVLTSM 257



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 3/153 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL--KCELDIRSYS 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    + +Y+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL-DMEA 368
            LI   C++ RL + +    ++ +     + +T+  ++  LCAD +   A D+ L  M  
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               PD  +   L+ G    N + + +EL H M
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMM 184


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/401 (33%), Positives = 217/401 (54%), Gaps = 29/401 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  +M     E     KPD 
Sbjct: 98  VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EELSHIKPDV 152

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIY+ IIDGL K+G    A+ L ++M+DK I PD+VTY+ +I GFC +   +EA+RL  E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+VVTFS +++ L K G +  A  LL+ MI  GV PN    NTL+DG C +G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+F +M+                        +  + + +     G++P V TYN 
Sbjct: 273 LKDALEMFKAMQ------------------------KSMMDIDATHAFNGVEPDVQTYNI 308

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    +   A +L++EM   G+  DT  Y + I+GLCK   + EA ++F ++    
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +I +++ LI G CK+G +    ELF  + R  ++A+ +TY  +I      G ++ + 
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+F +M + GV PD +    ++ G     E  + + +L  +
Sbjct: 429 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 210/394 (53%), Gaps = 22/394 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F KL   G  P ++T++TL++GLC       AL+LF +M          CKP+ V 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----------CKPNVVT 83

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+++GLC+EG V +A  LL +M +  + P+ +TY +++ G C   D+  A  L  +M 
Sbjct: 84  FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 143

Query: 123 D-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++P+VV +S I+D L K+G+  +A  L   M   G+ P+   Y+ +++GFC +G+ 
Sbjct: 144 ELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW 203

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L   M       +V ++S LIN   K  ++  A  L  EM+S G+ P VVT NTL
Sbjct: 204 SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL 263

Query: 242 FIGLFEIHQVERAFKLFDEMQR-----------HGVAADTWAYRTFIDGLCKNGYIVEAL 290
             GL +  +++ A ++F  MQ+           +GV  D   Y   I GL   G  +EA 
Sbjct: 264 LDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAE 323

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           EL+  +       D  +YS +I+GLCK  RL  A ++F S+       ++VT+N +I   
Sbjct: 324 ELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGY 383

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           C  G +D   +LF +M  +G+  + + + TL+ G
Sbjct: 384 CKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 22/399 (5%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           ++ +++ LI   C       AL+ F ++     + G    P  V + T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A +L  QM      P+VVT+ +++ G C      EA  L   M++ G+QPN +T+  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 DELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           D +CK G    A  LL  M ++  ++P+  +Y+ ++DG    GR   A+ LF+ M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++ +YS +ING+C + +   A  L  EML + I P VVT++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-----------ILKCELDI 305
           L  EM   GV  +     T +DGLC +G + +ALE+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
           ++Y+ LI GL   G+   A EL+  +P   ++ D VTY+ MI+ LC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M +K  +P+ V FNTL+ G  +       +EL   M  R
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 175/326 (53%), Gaps = 16/326 (4%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P +VT+N+++ G C  +  +EA  LF +M     +PNVVTF+ +M+ LC+ G++ EA  
Sbjct: 47  HPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVA 102

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGY 210
           LL+ M++ G++PN   Y T++DG C  G    A  L   ME +   K +V  YS +I+G 
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K+     A +L+ EM  KGI P +VTY+ +  G     +   A +L  EM    ++ D 
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +   I+ L K G +  A +L + +       ++ + + L+DGLC SG+LK A E+F +
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 331 LPRGVLI-----------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           + + ++             DV TYNI+I  L  +GK  +A +L+ +M  +G+ PD V ++
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           +++ G  + +   +  ++   M  ++
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKS 368



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 142/272 (52%), Gaps = 17/272 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++      P+V+T+S LIN L + G    A +L +EMI+       VC P+ V
Sbjct: 205 EAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VC-PNVV 258

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-----------NINPDVVTYNSVIRGFCYAND 110
              T++DGLC  G +  A E+   M+              + PDV TYN +I G      
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             EA+ L+ EM  +G+ P+ VT+S +++ LCK  +++EA+Q+ + M      PN   +NT
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G+C  G V+   ELF  M   G   N  +Y  LI G+ K   I G+L ++ EM+S G
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           + P  +T   +  GL+   +++RA  + +E+Q
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 223/424 (52%), Gaps = 43/424 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++++Y+T+INGLC+      A++L  EM       G  C+P++  Y  ++DGLCKEG V
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEM------EGSSCEPNSFTYCILMDGLCKEGRV 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  LL +MK K +  DVV Y+++I GFC     +  K LF EM+++G+ PNVV +S +
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  CK G   EA+ +L  M + G++P+ + Y  ++ G C  GR  +A +LF  M   G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + +  +Y++LING CK   I  A  ++  ML KG +  VV+YNTL +GL    +++ A K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 257 LFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTL-------RILKCELDI-- 305
           LF  +   G  V  D   + T I GLCK G + +A+E++ T+        +  C + I  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 306 --------------------------RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
                                      +YS +IDG CK   L  A  LF  +    L   
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +  YN ++ +LC +  +++A  LF +M+     PD ++FN ++ G ++  +     ELL+
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 400 RMDE 403
            M +
Sbjct: 422 DMQQ 425



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 219/401 (54%), Gaps = 8/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
             ALF ++   G  PNV+ YS LING C+ G    A  +   M     E G+  +PD   
Sbjct: 99  GKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMT----ERGI--QPDVYT 152

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I GLCK+G   KA +L   M +K   P  VTYN +I G C      +A ++F  M+
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDGFCLTGR 180
           ++G +  VV+++ ++  LC NGK++EA +L   +++ G  V P+   +NT++ G C  GR
Sbjct: 213 EKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGR 272

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A E++ +M   G   N+F+  ILI  Y K+  I+ A+ L+  +   G+ P+  TY+ 
Sbjct: 273 LDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G  ++H +  A  LF  M+  G++   + Y T +  LCK   + +A  LF+ ++   
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           CE D  S++ +IDG  K+G +  A EL + + +  L  D  TY+  I+ L   G+M++A 
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             F  M A G+ PD   +++L+ G   N+E  +V+ LL +M
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 2/318 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           MK  NI PD+V+YN++I G C      +A  L +EM     +PN  T+ ++MD LCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +EEA +LL  M + G+  +  VY+TL+ GFC  G ++R K LF  M   G   NV  YS 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING+CK      A ++   M  +GI+P V TY  +  GL +  +  +A  LFD M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
               T  Y   I+GLCK G I +A ++F T+      L++ SY+ LI GLC +G+L  A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 326 ELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           +LF SL      +  DV+T+N +I  LC +G++DKA +++  M  +G   +    + L+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 384 GCIRNNETSKVVELLHRM 401
             I++    K +EL  R+
Sbjct: 301 EYIKSGIIDKAMELWKRV 318



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 212/399 (53%), Gaps = 8/399 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A+   +   G +P+V TY+ +I GLC+ G    AL+LF+ M     E      P  V
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE------PSTV 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCKEG +  A ++   M +K    +VV+YN++I G C     +EA +LF  +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ G  V+P+V+TF+ ++  LCK G++++A ++ + MI+ G   N F  + L+  +  +G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +++A EL+  +  +G   +  +YS++I+G+CK   +  A  L+S M   G+ PT+  YN
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL   L +   +E+A +LF EM+      DT ++   IDG  K G I  A EL   ++ +
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +YS  I+ L K G+++ A   F S+    +  D   Y+ +I     + ++++ 
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEV 486

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +L   M   GV  D    N+++     + E   V+ELL
Sbjct: 487 INLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/426 (33%), Positives = 223/426 (52%), Gaps = 46/426 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+P V+T++ +I+G C+      AL  FE+M     EF     P+   Y  +++GLCK  
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKM----REF---VAPNERTYNVVVNGLCKAR 55

Query: 75  FVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVT 132
              KA E+L +M+D K++ PD+VTY++VI GFC   + + A  +  EM+ + G+ P+VVT
Sbjct: 56  LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVT 115

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF-------------------------- 166
           ++ ++D LC++GKM+ A +++  M   GV P+ F                          
Sbjct: 116 YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175

Query: 167 ----------VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                      Y  L+DGFC +G + +A ++   ME   C  NV +YS L++G CK  ++
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL L+  M SKG  P VVTY TL  GL   H+V+ A  L DEM       DT +Y   
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNAL 295

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +DG C+ G I EA +LF+ +    C  D  +Y+CL+ G C + RL+ A  L  ++     
Sbjct: 296 LDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 355

Query: 337 I-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           I  DVVTY+I++       +  +A +   +M A+ VAP+ V +++L+ G  +       +
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM 415

Query: 396 ELLHRM 401
           E+L  M
Sbjct: 416 EVLKNM 421



 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 215/422 (50%), Gaps = 42/422 (9%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+++TYST+ING C+ G    A  +  EM+  +G       PD V YT+++DGLC++G +
Sbjct: 75  PDLVTYSTVINGFCKQGEMDRACEILREMVTRDG-----IAPDVVTYTSVVDGLCRDGKM 129

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSV 135
           D+A E++ +MK K + PD  T++++I G+C A   +EA +L+ E++     +P+VVT++ 
Sbjct: 130 DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTA 189

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D  CK+G +E+A ++L +M      PN   Y++L+ G C  G +++A +LF  M S G
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  NV +Y+ LI+G C   +++ A  L  EM +    P  V+YN L  G   + ++E A 
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCK-------------------------------NG 284
           +LF EM       D   Y   + G C                                 G
Sbjct: 310 QLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 369

Query: 285 Y-----IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           Y      VEA E  + +       +  +YS LIDGLCK+GR+  A E+  ++    +   
Sbjct: 370 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPS 429

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           V T+N +I ALC  G MD+A  L + M A G+ P  V + TL+ G  R        EL  
Sbjct: 430 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489

Query: 400 RM 401
            M
Sbjct: 490 VM 491



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 213/411 (51%), Gaps = 15/411 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++K  G EP+  T+S LI G C       AL L++E++  +       KPD V 
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS-----WKPDVVT 186

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG CK G ++KA ++L  M+ +   P+VVTY+S++ G C A D ++A  LF  M 
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVT++ ++  LC   K++ A  L++ M      P+   YN L+DG+C  GR+ 
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTL 241
            AK+LF  M +  C  +  +Y+ L+ G+C    +E A  L   M  + GI P VVTY+ +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +   A +   EM    VA +   Y + IDGLCK G +  A+E+ + +   + 
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +++ +I  LC+ G +  AW+L  ++    L   +VTY  ++      G+M+ A++
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486

Query: 362 LFLDME--------AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  M         A  + P+  AF+ L+ G  +  E  K + ++  +  R
Sbjct: 487 LFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSR 536



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 187/340 (55%), Gaps = 14/340 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ + GC PNV+TY+TLI+GLC       A  L +EM          C PD V
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------ATCCPPDTV 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DG C+ G +++AK+L  +M  K+  PD +TY  ++RGFC A+   EA+ L   M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+ P+VVT+S+++    +  +  EA++ ++ MI   V PNA  Y++L+DG C  GR
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A E+  +M +   + +V +++ +I   C+  +++ A  L   M + G++P +VTY T
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVA-------ADTWAYRTFIDGLCKNGYIVEALELF 293
           L  G     ++E A++LF+ M++               A+   I GLCK   I +A+ + 
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 530

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             LR  +CE        ++DGL ++GR + A +L +S+ +
Sbjct: 531 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 137/272 (50%), Gaps = 12/272 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    C P+ ITY+ L+ G C       A  L E M    G       PD V
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG-----IDPDVV 361

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++ G  +     +A E + +M  +N+ P+ VTY+S+I G C A   + A  +   M
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ V+P+V TF+ ++  LC+ G M+EA +LL  M   G+ P    Y TL++GF  TGR+
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 481

Query: 182 NRAKELFVSMESMGCKHNVF-------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
             A ELF  M     K +         ++S LI G CK +EI+ A+++  E+ S+  +P 
Sbjct: 482 EIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPA 541

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                 +  GL    + E A KL + + + G+
Sbjct: 542 EEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 72/263 (27%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-------------------------- 227
           M C+  V +++I+I+G+CK  +++ AL+ + +M                           
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 228 ---------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFI 277
                     K + P +VTY+T+  G  +  +++RA ++  EM  R G+A D   Y + +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 278 DGLCKNGYIVEALELFRTLRILKCE----------------------------------- 302
           DGLC++G +  A E+ R +++   E                                   
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 303 -LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LIDG CKSG L+ A ++   +     + +VVTY+ ++H LC  G +D+A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF  M +KG  P+ V + TL+ G
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHG 263



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA    ++ A    PN +TYS+LI+GLC+ G    A+ + + M+N   E      P  
Sbjct: 377 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVE------PSV 430

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + ++I  LC+ G +D+A +LL+ M    + P +VTY +++ GF        A  LF  
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490

Query: 121 M----MDQGVQPNVV---TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           M           N+V    FS ++  LCK  ++++A  ++E +      P       ++D
Sbjct: 491 MRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 550

Query: 174 GFCLTGRVNRAKELFVSMESMG 195
           G    GR   A +L  S+  +G
Sbjct: 551 GLLRAGRTEEAGKLINSISKVG 572


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/392 (34%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +L    L+ DV TY++M   L   G +++  DLFL ME  G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    N+++   ++  + ++    L  +DE++
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 222/462 (48%), Gaps = 74/462 (16%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+ GLC    +  AL L + M +  G+    C PD V YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG +DKA     +M D+ I P+VVTYNS+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSY-----------------------------------SILINGY 210
           ++F SM   G K  + +Y                                   SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ P  VTY T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + +I +YS LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 214/450 (47%), Gaps = 76/450 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+                
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 106 -----------------CYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             YA     ++A  +F +M  QG+ P+ VT+  ++  LCK+G++
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL----------------------------------- 171
           E+A +  E MI   + P   VYN+L                                   
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  +++LF  M  +G K N+ +YS LI+GYC   +++ A  L + M+S G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  G  +I ++E A  LF EM+  GV+ D   Y   + GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +     +L++ +Y+ ++ GLCK+     A  +F +L    L  +  T+NIMI AL 
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             G+ D+A DLF  + A G+ PD   ++ +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 13/402 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++AKEL + M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSI-IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +    
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D+A 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
            +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 640 RMFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 680



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 50/443 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   PN+ TY  LI   C  G   +       +I     F V    D
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKG--FRV----D 125

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M      P+V +YN +++G C  N S EA  L 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 118 ------------------------------------FIEMMDQGVQPNVVTFSVIMDELC 141
                                               + EM+D+G+ PNVVT++ I+  LC
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALC 245

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K   M++A ++L  M++ GV PN   YN+++ G+C +G+   A      M S G + +V 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R+G+  + + +   I    K G + +A+ +F  +R      D  +Y  +I  LCKSGR+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A   F  +    L    + YN +IH+LC   K DKA +L L+M  +G+  D + FN++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 382 MLGCIRNN---ETSKVVELLHRM 401
           +    +     E+ K+ +L+ R+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRI 508



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 158/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTYN++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +PN+ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LF ++ + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/427 (32%), Positives = 227/427 (53%), Gaps = 54/427 (12%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++ + G  P+VIT+ TLI+G CR G  + A  +F+EM       G+V  P  ++YT 
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK----GIV--PTVIVYTI 222

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC +  +++A+ +   M++  + P+V TYN+++ G+C   ++ +A RL+ +M+ +G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+VVTF +++D LCK G+M+ A  L   MI+  V PN  VYN+L+D +C  G V+ A 
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342

Query: 186 ELFVSMESMGCKHNVFSYSILINGY----------------------------------- 210
            LF+ +E      +VF+YSILI G                                    
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ AL + S+M   G++P V+T++TL  G  +I  ++ A  ++ EM    ++ D 
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-- 328
             Y   IDG CK G + EAL+L+  +       +  + SCL+DGLCK G++  A ELF  
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 329 ---HSLPRGVL--------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                 PR  +        + + V Y  +IH LC DG+  KA  LF DM   G+ PD V 
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 378 FNTLMLG 384
           +  ++ G
Sbjct: 583 YVVMLRG 589



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 214/397 (53%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +++ K+   G    +   + L+  L +TG   +   ++EEMI+ NG       P  +
Sbjct: 133 EALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS-NG-----LSPSVI 183

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+IDG C++G + +A+E+  +M+ K I P V+ Y  +IRG C  N   EA+ +   M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV PNV T++ +MD  CK    ++A +L + M+  G+ P+   +  L+DG C  G +
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ LFV+M       N+  Y+ LI+ YCK  ++  A++L+ E+    + P V TY+ L
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + + E A  +F++M + G+ A++  Y + IDG CK G + +ALE+   +     
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ ++S LIDG CK   L+ A  ++  +    L  DVVTY  MI   C  G M +A  
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L+ DM   G+ P+C   + L+ G  ++ + S  +EL 
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELF 520



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 164/321 (51%), Gaps = 5/321 (1%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
           L ++K     P+V  Y  +I   C      EA  ++ ++   G    +   +V++  L K
Sbjct: 105 LSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVK 159

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            G+ E   ++ E MI  G+ P+   + TL+DG C  G + RA+E+F  M   G    V  
Sbjct: 160 TGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIV 219

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ILI G C + +IE A S++  M   G+ P V TYNTL  G  ++   ++A +L+ +M 
Sbjct: 220 YTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDML 279

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   +   IDGLCK G +  A  LF  +       +I  Y+ LID  CK G + 
Sbjct: 280 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVS 339

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  LF  L R  +  DV TY+I+I  LC+  + ++A ++F  M  +G+  + V +N+L+
Sbjct: 340 EAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLI 399

Query: 383 LGCIRNNETSKVVELLHRMDE 403
            GC +  +  K +E+  +M E
Sbjct: 400 DGCCKEGKMDKALEICSQMTE 420


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 213/385 (55%), Gaps = 13/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F      G  P+V+TY+ LING C+      A  + + M++ N        PD V
Sbjct: 63  EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN------LVPDVV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA-NDSNEAKRLFIE 120
            Y ++++GLCK G VD+A+ L++   DK  +P+V+TY+++I G C      +EA +LF  
Sbjct: 117 TYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG +P V T+++++D L K  ++ EA +L   +++ G+ P+A  Y   +DG C  GR
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +   M+  GC  +V S++ +ING CK K ++ A  L S M +KG  P  +++NT
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---NGYIVEALELFRTLR 297
           L  G     + ++A   F EM + GV      Y   +DGLCK    G I EA+ LF  + 
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+ +YS LIDGL K+G+L  A  L  ++     I +V TYN +I  LC   K+D
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVD 413

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A +LF+ M  KG  PD + + T++
Sbjct: 414 EALELFVAMVEKGCVPDTITYGTII 438



 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 226/407 (55%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL+ ++   G  P+V+TY+TL++G C+ G    AL +F+    G  + G V  PD V
Sbjct: 28  DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFD----GAVKRGFV--PDVV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK   +D+A+ +L +M  +N+ PDVVTYNS++ G C     +EA+ L +  
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIV-- 139

Query: 122 MDQGVQPNVVTFSVIMDELCKNGK-MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            D+G  PNV+T+S ++  LC+  + + EA +L   +++ G  P    YN L+DG     R
Sbjct: 140 -DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDR 198

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A ELF  +   G + +  +Y++ I+G CK   +E AL +  +M  KG  P VV++N 
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +V+ A  L   M+  G + +  ++ T I G C+ G   +A+  F+ +    
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318

Query: 301 CELDIRSYSCLIDGLCKS---GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  + +Y+ L+DGLCK+   GR+K A  LF ++     + DVVTY+ +I  L   GK+D
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A  L   MEAKG  P+   +N+L+ G     +  + +EL   M E+
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 193/346 (55%), Gaps = 4/346 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+ + Y  ++ GLC  G +  A+ L  +M     +PDVVTYN+++ GFC   + +EA ++
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F   + +G  P+VVT++ +++  CK  K++EA ++L+ M+   + P+   YN+L++G C 
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVV 236
            GRV+ A+ L V     G   NV +YS LI+G C+  + +  AL L+  +L +G +P V 
Sbjct: 128 NGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN L  GL +  +V  AF+LF  + +HG+  D   Y  FIDGLCK G + +AL + + +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C  D+ S++ +I+GLCK  R+  A  L   +       + +++N +I   C  GK 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            KA   F +M  +GV P  V +N L+ G  +  +  ++ E +   D
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 178/320 (55%), Gaps = 4/320 (1%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M+     P+ +TYN+++ G C     ++A+ L+  M+  G  P+VVT++ ++   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++EA ++ +  ++ G  P+   YN L++GFC   +++ A+ +   M S     +V +Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL-FEIHQVERAFKLFDEMQRH 264
           L+NG CKN  ++ A  L   ++ KG  P V+TY+TL  GL  E+  V  A KLF  + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   +   Y   IDGL K   + EA ELF  L     E D  +Y+  IDGLCK+GR++ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +   +     + DVV++N +I+ LC + ++D+A  L   MEAKG +P+ ++FNTL+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 385 CIRNNETSKVVELLHRMDER 404
             R  +  K +     M +R
Sbjct: 298 QCRAGKWKKAMTTFKEMLKR 317



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%)

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ L+ GLC  GR+  A  L+  + +     DVVTYN ++H  C  G++D+A  +F   
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +G  PD V +N L+ G  + ++  +   +L RM   N
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN 110


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 215/403 (53%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+  G  P+VITY+ LI G C++G    AL + E M            PD V
Sbjct: 159 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---------SVAPDVV 209

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +   +   PDV+TY  +I   C  +   +A +L  EM
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRW 329

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L   M   GC  +V +++ILIN  C+ + +  A+ +  +M   G  P  ++YN L
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G +  A+E+   L    C
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC 449

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K G+ + A EL   + R  L  D++TY+ ++  L  +GK+D+A  
Sbjct: 450 SPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F DME   + P  V +N +MLG  +  +TS+ ++ L  M E+
Sbjct: 510 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 196/375 (52%), Gaps = 6/375 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L+     P+V+TY+T++  LC +G    A+ + +  +         C PD + YT +I+ 
Sbjct: 199 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE------CYPDVITYTILIEA 252

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C +  V +A +LL +M+ K   PDVVTYN +I G C     +EA +    M   G +PN
Sbjct: 253 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPN 312

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  C    + RA ++  
Sbjct: 313 VITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC  N  SY+ L++G+C+ K+++ A+     M+S+G  P +VTYNTL   L +  
Sbjct: 373 KMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 432

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A ++ +++   G +     Y T IDGL K G    A+EL   +R    + DI +YS
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+ GL + G++  A ++FH +    +    VTYN ++  LC   +  +A D    M  K
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552

Query: 370 GVAPDCVAFNTLMLG 384
           G  P    +  L+ G
Sbjct: 553 GCKPTEATYTILIEG 567



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 179/335 (53%), Gaps = 3/335 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G +++  + L +M  +   PDV+   S+IRGFC +  + +A R+   + + G  P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++V++   CK+G++++A ++LE M    V P+   YNT++   C +G++  A E+  
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 C  +V +Y+ILI   C +  +  A+ L  EM  KG KP VVTYN L  G+ +  
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A  L   +    C   + +++
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI+ LC+   L  A ++   +P+   + + ++YN ++H  C + KMD+A +    M ++
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +NTL+    ++ +    VE+L+++  +
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 147/267 (55%), Gaps = 3/267 (1%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + +L +NG++EE  + LE MI  G  P+     +L+ GFC +G+  +A  +   +E+ G 
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI GYCK+ EI+ AL +   M    + P VVTYNT+   L +  +++ A +
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D   +     D   Y   I+  C +  + +A++L   +R   C+ D+ +Y+ LI+G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL  A +  +++P      +V+T+NI++ ++C+ G+   A  L  DM  KG +P  V
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    R     + +++L +M +
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPK 376



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 154/303 (50%), Gaps = 3/303 (0%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           +R      +  E  +    M+ QG  P+V+  + ++   C++GK ++A++++E++   G 
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN L+ G+C +G +++A E+   +E M    +V +Y+ ++   C + +++ A+ 
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +    L +   P V+TY  L         V +A KL DEM++ G   D   Y   I+G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K G + EA++    +    C+ ++ +++ ++  +C +GR   A  L   + R      VV
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           T+NI+I+ LC    + +A D+   M   G  P+ +++N L+ G  +  +  + +E L  M
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409

Query: 402 DER 404
             R
Sbjct: 410 VSR 412



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 137/247 (55%), Gaps = 6/247 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L + +   GC P+V+T++ LIN LCR      A+++ E+M          C P++
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG------CVPNS 383

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G C+E  +D+A E L  M  +   PD+VTYN+++   C     + A  +  +
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK E A +LLE M + G++P+   Y+TL+ G    G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A ++F  ME +  K +  +Y+ ++ G CK ++   A+   + M+ KG KPT  TY  
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 241 LFIGLFE 247
           L  G+ +
Sbjct: 564 LIEGIAD 570



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 3/201 (1%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           F+ +I +    +N E+E  L     M+ +G  P V+   +L  G     + ++A ++ + 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           ++  G   D   Y   I G CK+G I +ALE+   + +     D+ +Y+ ++  LC SG+
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAP---DVVTYNTILRSLCDSGK 223

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           LK A E+     +     DV+TY I+I A C D  + +A  L  +M  KG  PD V +N 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G  +     + ++ L+ M
Sbjct: 284 LINGICKEGRLDEAIKFLNNM 304


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/395 (35%), Positives = 217/395 (54%), Gaps = 10/395 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+   G  P+++T  +L+NG C+      A++L + M      FG V  P+ VIY T+I+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM----DGFGFV--PNVVIYNTVIN 192

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK   ++ A E+   M+ K I  D VTYN++I G   +    +A RL  +M+ + + P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+ F+ ++D   K G + EA  L + MI+  V PN F YN+L++GFC+ G +  AK +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+     TYNTL  G  + 
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A K+F+ M   GV+ D   Y   +D LC NG I +AL +   L+  + ++DI +Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +I GLC++ +LK AW LF SL R  +  D + Y  MI  LC  G   +A  L   M+ 
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G  P    ++  +    R++ TS   EL+    E
Sbjct: 493 DGFMPSERIYDETL----RDHYTSLSAELIKAAHE 523



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 178/326 (54%), Gaps = 6/326 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   +  FG  PNV+ Y+T+INGLC+      AL +F  M     + G+  + DAV
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM----EKKGI--RADAV 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GL   G    A  LL  M  + I+P+V+ + ++I  F    +  EA+ L+ EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNV T++ +++  C +G + +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ P +VTYN L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    ++E+A  + +++Q+  +  D   Y   I GLC+   + EA  LFR+L     
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWEL 327
           + D  +Y  +I GLC+ G  + A +L
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKL 486



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 178/352 (50%), Gaps = 7/352 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A +LF EM+           P  V +T ++  + K    D    L  +M++  I+ D+ +
Sbjct: 63  AFSLFCEMLQSRP------IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +  +I  FC  +  + A  L  +MM  G +P++VT   +++  C+  + +EA  L++ M 
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN  +YNT+++G C    +N A E+F  ME  G + +  +Y+ LI+G   +    
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I P V+ +  L     +   +  A  L+ EM R  V  + + Y + I
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +G C +G + +A  +F  +    C  D+ +Y+ LI G CKS R++   +LF  +    L+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            D  TYN +IH  C  GK++ A  +F  M   GV+PD V +N ++L C+ NN
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLCNN 407



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 128/239 (53%), Gaps = 6/239 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++      PNV TY++LING C  G    A  +F+ M++        C PD 
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 324

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I G CK   V+   +L  +M  + +  D  TYN++I G+C A   N A+++F  
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D GV P++VT+++++D LC NGK+E+A  ++E + +  +  +   YN ++ G C T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +  A  LF S+   G K +  +Y  +I+G C+      A  L   M   G  P+   Y+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 144/290 (49%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+ ++  + K  K +    L   M  +G+  + + +  L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +  FC   R++ A  L   M  +G + ++ +   L+NG+C+    + A+SL   M   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VV YNT+  GL +   +  A ++F  M++ G+ AD   Y T I GL  +G   +A  
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R +   K + ++  ++ LID   K G L  A  L+  + R  ++ +V TYN +I+  C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G +  A  +F  M +KG  PD V +NTL+ G  ++      ++L   M
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 35/238 (14%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A  L   M+Q    P+   +  ++       + +    L+  ME++G  H+++S++
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILI+ +C+   +  AL+L  +M+  G +P++VT  +L  G  + ++ + A  L D M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   +   Y T                                   +I+GLCK+  L  A
Sbjct: 179 GFVPNVVIYNT-----------------------------------VINGLCKNRDLNNA 203

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            E+F+ + +  + AD VTYN +I  L   G+   A  L  DM  + + P+ + F  L+
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 94/190 (49%)

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           + + A SL+ EML     P++V +  +   + ++++ +    L+ +M+  G++ D +++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             I   C+   +  AL L   +  L     I +   L++G C+  R + A  L  S+   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
             + +VV YN +I+ LC +  ++ A ++F  ME KG+  D V +NTL+ G   +   +  
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 395 VELLHRMDER 404
             LL  M +R
Sbjct: 239 ARLLRDMVKR 248


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +L    L+ DV TY++M   L   G +++  DLFL ME  G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    N+++   ++  + ++    L  +DE++
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 222/462 (48%), Gaps = 74/462 (16%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+ GLC    +  AL L + M +  G+    C PD V YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG +DKA     +M D+ I P+VVTY+S+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSY-----------------------------------SILINGY 210
           ++F SM   G K  + +Y                                   SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ P  VTY T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI +YS LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 214/450 (47%), Gaps = 76/450 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+                
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 106 -----------------CYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             YA     ++A  +F +M  QG+ P+ VT+  ++  LCK+G++
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL----------------------------------- 171
           E+A +  E MI   + P   VYN+L                                   
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  +++LF  M  +G K ++ +YS LI+GYC   +++ A  L + M+S G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  G  +I ++E A  LF EM+  GV+ D   Y   + GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +     +L++ +Y+ ++ GLCK+     A  +F +L    L  +  T+NIMI AL 
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             G+ D+A DLF  + A G+ PD   ++ +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 13/402 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++AKEL + M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSI-IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +    
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D+A 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
            +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 640 RMFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 680



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 208/443 (46%), Gaps = 50/443 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   PN+ TY  LI   C  G   +       +I     F V    D
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKG--FRV----D 125

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M      P+V +YN +++G C  N S EA  L 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 118 ------------------------------------FIEMMDQGVQPNVVTFSVIMDELC 141
                                               + EM+D+G+ PNVVT+S I+  LC
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K   M++A ++L  M++ GV PN   YN+++ G+C +G+   A      M S G + +V 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R+G+  + + +   I    K G + +A+ +F  +R      D  +Y  +I  LCKSGR+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A   F  +    L    + YN +IH+LC   K DKA +L L+M  +G+  D + FN++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 382 MLGCIRNN---ETSKVVELLHRM 401
           +    +     E+ K+ +L+ R+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRI 508



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 158/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTY+++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LF ++ + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/395 (33%), Positives = 210/395 (53%), Gaps = 7/395 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  + A GC PNV +YS LI GLCR      A  L  EMI+G  +      P+ V
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVV 123

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GLCK G + +A +L  +M  +   PD V YN +I GF    D  EA RLF EM
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P V T++ ++    + G+      L + M++ G  PN F +N L+DGFC  G +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF+ M S+GC  +V SY+ LI G C   +   A  L  EM+  G+ P +V+YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A KLF E+ + G+  D ++Y T ID LC+ G +  A  +F+ +     
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D      L+ GLC+  RL  + ELF ++ +   +  +  YN++++ LC   + D   +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +F ++  +G +PD V  + ++L  +R ++     E
Sbjct: 424 IFHELTERGFSPD-VEISKVILETLRRSDDKDAAE 457



 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 201/399 (50%), Gaps = 6/399 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           +  + A GC PN  TY  L+  LC+      A ++F  M          C P+   Y+ +
Sbjct: 40  YNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG------CSPNVFSYSIL 93

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I GLC+   VD+A ELL +M D    P+VVTY S++ G C      EA  LF  M+ +G 
Sbjct: 94  IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+ V ++V++D   K G M EA +L E M++ G  P  F YN+L+ GF   G   R + 
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           LF  M   GC  N+F+++ L++G+CK  ++  A  L+ EM S G  P VV+YNTL  G+ 
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              +   A +L  EM R GV  D  +Y   IDG  K+G +  A++LF  +     E D  
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           SYS +ID LC++G++  A+ +F  +       D      ++  LC   ++ ++ +LF  M
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
                 P    +N LM    +   +  V E+ H + ER 
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 169/320 (52%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++ L K G  D        M      P+  TY  ++R  C A    EA+ +F  M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG  PNV ++S+++  LC+  K++EA++LL  MI  G +PN   Y +L+ G C  G++ 
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  M   GC  +   Y++LI+G+ K  ++  A  L+ EML KG  PTV TYN+L 
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +  R   LF +M R G   + + +   +DG CK G +VEA  LF  +R L C 
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ SY+ LI G+C  G+   A  L   + R  +  D+V+YNI+I      G +D A  L
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
           F ++   G+ PD  +++T++
Sbjct: 320 FYEIPKSGLEPDAFSYSTII 339



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 138/273 (50%)

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
             ++++ +++ L K+G+ +        M+  G  PN + Y  L+   C   R   A+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M + GC  NVFSYSILI G C+ ++++ A  L +EM+  G +P VVTY +L  GL ++
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +++ A  LF  M   G   D   Y   IDG  K G + EA  LF  +    C   + +Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + L+ G  + G       LF  + R   + ++ T+N ++   C  G M +AH LFL+M +
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G  PD V++NTL+ G     +  +   LL  M
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 154/314 (49%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           + N   ++YN ++     +   +     + +M+  G  PN  T+  ++  LC+  + EEA
Sbjct: 12  HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEA 71

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +   M   G  PN F Y+ L+ G C   +V+ A EL   M   G + NV +Y  L++G
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK  +++ A+ L+S M+ +G  P  V YN L  G  +   +  A++LF+EM   G    
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            + Y + + G  + G       LF+ +    C  +I +++ L+DG CK G +  A  LF 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +       DVV+YN +I  +C+ GK  +A  L  +M   GV PD V++N L+ G  ++ 
Sbjct: 252 EMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 390 ETSKVVELLHRMDE 403
                ++L + + +
Sbjct: 312 ALDHAIKLFYEIPK 325



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 108/227 (47%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q+        YN L++    +GR +     +  M + GC  N ++Y  L+   C+ +  E
Sbjct: 10  QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A S++  M ++G  P V +Y+ L  GL    +V+ A +L +EM   G   +   Y + +
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            GLCK G + EA++LF  +    C  D   Y+ LIDG  K G +  A+ LF  +     I
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             V TYN ++      G+  +   LF DM  +G  P+   FN L+ G
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 6/200 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++++ GC P+V++Y+TLI G+C  G    A  L  EMI      GV   PD 
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS----GV--GPDI 297

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDG  K G +D A +L  ++    + PD  +Y+++I   C A     A  +F +
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P+      ++  LC+  ++ E+ +L + M++    P    YN LM   C   R
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 181 VNRAKELFVSMESMGCKHNV 200
            +   E+F  +   G   +V
Sbjct: 418 SDDVCEIFHELTERGFSPDV 437



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%)

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            ++YN L   L +  + +  +  +++M   G   +T+ Y   +  LC+     EA  +FR
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  ++ SYS LI GLC+  ++  A EL + +  G    +VVTY  ++  LC  G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+ +A DLF  M  +G  PD V +N L+ G  +  +  +   L   M E+ 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/371 (36%), Positives = 201/371 (54%), Gaps = 18/371 (4%)

Query: 26  INGLCRTGHTIVALNLFEEMINGNGEFG----VVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           + GLC  G    AL   + +I           ++ KPD V+Y TIID LCK+  V    +
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 82  LLLQMKDKNINPDVVTYNSVIR--------------GFCYANDSNEAKRLFIEMMDQGVQ 127
           L  +M DK I PDVVTYN++I               GF       EA  L  +M  + V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PN+ TF+ ++D LCK+G++++A  +L +MI+  V PN   YN+LMDG+ L   VN+AK+L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F ++   G   NV SY ++ING CKNK ++ A +L+ EM SK + P  V YN+L  GL +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             ++   +    EM   G  A+   Y + +DGLCKN  + +A+ L   ++      +I +
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ L+DGLCK+GRL+ A E++  L       D   Y +MI+ LC +G +D+A  L   ME
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360

Query: 368 AKGVAPDCVAF 378
                PD V +
Sbjct: 361 DNKCTPDGVTY 371



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 176/317 (55%), Gaps = 8/317 (2%)

Query: 17  PNVITYSTLINGL-------CRTGHTIVALNLFEEMING-NGEFGVVCKPDAVIYTTIID 68
           P+V+TY+TLI  L        R  +    L   +E +   N        P+   +TT++D
Sbjct: 72  PDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVD 131

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK+G V KA+ +L  M  + + P++VTYNS++ G+    + N+AK+LF  +  +G+ P
Sbjct: 132 GLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTP 191

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV ++ V+++ LCKN  ++EA+ L + M    + P+   YN+L+DG C + R+    +  
Sbjct: 192 NVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFI 251

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   N+ +Y+ L++G CKN +++ A++L +++ ++GI+P + TY  L  GL + 
Sbjct: 252 GEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKN 311

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A +++ ++   G   D   Y   I+GLCK G++ EAL L   +   KC  D  +Y
Sbjct: 312 GRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTY 371

Query: 309 SCLIDGLCKSGRLKIAW 325
              I  L +S R +I +
Sbjct: 372 EITIRALFESDRNEILY 388



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 137/275 (49%), Gaps = 29/275 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  L  ++ +    PN+ T++TL++GLC+ G    A N+   MI    E  +V      
Sbjct: 106 EAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLM 165

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    P+   Y  +I+GLCK   VD+A  L  +M  KN+ 
Sbjct: 166 DGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMV 225

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD V YNS+I G C +    +      EM D+G   N++T++ ++D LCKN ++++A  L
Sbjct: 226 PDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITL 285

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+RPN + Y  L+DG C  GR+  A+E++  + + G + +   Y+++ING CK
Sbjct: 286 LTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCK 345

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              ++ ALSL S+M      P  VTY      LFE
Sbjct: 346 EGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFE 380



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 24/257 (9%)

Query: 172 MDGFCLTGRVNRA---------KELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           M G CL G V +A         K   ++ +E +  K +V  Y+ +I+  CK+K +     
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFE--------------IHQVERAFKLFDEMQRHGVA 267
           LYSEM+ K I P VVTYNTL   L                + Q++ A  L ++M    V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   + T +DGLCK+G + +A  +   +   + E +I +Y+ L+DG      +  A +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F+++    +  +V +Y +MI+ LC +  +D+A +LF +M +K + PD VA+N+L+ G  +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 388 NNETSKVVELLHRMDER 404
           +     V + +  M +R
Sbjct: 241 SRRIYDVWDFIGEMHDR 257



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 7/118 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L TK+K  G  PN+ TY+ L++GLC+ G    A  ++++++N   +       DA 
Sbjct: 281 KAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQL------DAR 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           IYT +I+GLCKEGF+D+A  LL +M+D    PD VTY   IR   + +D NE   +FI
Sbjct: 335 IYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRAL-FESDRNEILYIFI 391


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 214/403 (53%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+  G  P+VITY+ LI G C++G    AL + E M            PD V
Sbjct: 160 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---------SVAPDVV 210

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +   +   PDV+TY  +I   C  +   +A +L  EM
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 270

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRW 330

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L   M   GC  +V +++ILIN  C+ + +  A+ +  +M   G  P  ++YN L
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G    A+E+   L    C
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K G+ + A EL   + R  L  D++TY+ ++  L  +GK+D+A  
Sbjct: 451 SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F DME   + P  V +N +MLG  +  +TS+ ++ L  M E+
Sbjct: 511 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L+     P+V+TY+T++  LC +G    A+ + +  +         C PD + YT +I+ 
Sbjct: 200 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE------CYPDVITYTILIEA 253

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C +  V +A +LL +M+ K   PDVVTYN +I G C     +EA +    M   G QPN
Sbjct: 254 TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  C    + RA ++  
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC  N  SY+ L++G+C+ K+++ A+     M+S+G  P +VTYNTL   L +  
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           + + A ++ +++   G +     Y T IDGL K G    A EL   +R    + DI +YS
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+ GL   G++  A ++FH +    +    VTYN ++  LC   +  +A D    M  K
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553

Query: 370 GVAPDCVAFNTLMLG 384
           G  P    +  L+ G
Sbjct: 554 GCKPTKATYTILIEG 568



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 179/335 (53%), Gaps = 3/335 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G +++  + L +M  +   PDV+   S+IRGFC +  + +A R+   + + G  P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++V++   CK+G++++A Q+LE M    V P+   YNT++   C +G++  A E+  
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 C  +V +Y+ILI   C +  +  A+ L  EM  KG KP VVTYN L  G+ +  
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A  L   +    C   + +++
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI+ LC+   L  A ++   +P+   + + ++YN ++H  C + KMD+A +    M ++
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +NTL+    ++ +    VE+L+++  +
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 147/267 (55%), Gaps = 3/267 (1%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + +L +NG++EE  + LE MI  G  P+     +L+ GFC +G+  +A  +   +E+ G 
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI GYCK+ EI+ AL +   M    + P VVTYNT+   L +  +++ A +
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D   +     D   Y   I+  C +  + +A++L   +R   C+ D+ +Y+ LI+G+C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL  A +  +++P      +V+T+NI++ ++C+ G+   A  L  DM  KG +P  V
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    R     + +++L +M +
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPK 377



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 138/247 (55%), Gaps = 6/247 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   +   GC P+V+T++ LIN LCR      A+++ E+M          C P++
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG------CMPNS 384

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G C+E  +D+A E L  M  +   PD+VTYN+++   C    ++ A  +  +
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK E A++LLE M + G++P+   Y+TL+ G    G+
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A ++F  ME +  K +  +Y+ ++ G CK ++   A+   + M+ KG KPT  TY  
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 241 LFIGLFE 247
           L  G+ +
Sbjct: 565 LIEGIAD 571



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 154/303 (50%), Gaps = 3/303 (0%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           +R      +  E  +    M+ QG  P+V+  + ++   C++GK  +A++++E++   G 
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN L+ G+C +G +++A ++   +E M    +V +Y+ ++   C + +++ A+ 
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +    + +   P V+TY  L         V +A KL DEM++ G   D   Y   I+G+C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K G + EA++    + +  C+ ++ +++ ++  +C +GR   A  L   + R      VV
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           T+NI+I+ LC    + +A D+   M   G  P+ +++N L+ G  +  +  + +E L  M
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 402 DER 404
             R
Sbjct: 411 VSR 413



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 3/201 (1%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           F+ +I +    +N E+E  L     M+ +G  P V+   +L  G     +  +A ++ + 
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           ++  G   D   Y   I G CK+G I +AL++   + +     D+ +Y+ ++  LC SG+
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDSGK 224

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           LK A E+     +     DV+TY I+I A C D  + +A  L  +M  KG  PD V +N 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G  +     + ++ L+ M
Sbjct: 285 LINGICKEGRLDEAIKFLNNM 305


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 206/367 (56%), Gaps = 11/367 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           EP +I+++ +INGLC+ G    A ++ E+M + G          + + Y T+IDG CK G
Sbjct: 160 EPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG-------VSANVITYNTLIDGYCKMG 212

Query: 75  FVDK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
            + K   A  +L +M+   I P+ VT+N +I GFC   + + A ++F EM  QGV+PNVV
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++ +++ LC NGK+ EA+ L + M+   ++PN   +N L++GFC    V +A ELF  M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   NV +Y+ILI+ YCK++ +E A +LY  ML KG+ P V TYN L  GL     +
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A  L  EM    + AD   Y   ID LC  G + +AL L   +     +    +Y+ +
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDG CK G L+ A  L   + +   +A+V TYN++I   C   K++ A+ L  +M  KG+
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 372 APDCVAF 378
            P+ + +
Sbjct: 513 IPNRMTY 519



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 208/401 (51%), Gaps = 9/401 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +   +G + +V + + L++GL + G       +++EMI    E      P  + +  +
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIE------PTLISFNIV 169

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE---AKRLFIEMMD 123
           I+GLCK G ++KA +++  MK + ++ +V+TYN++I G+C      +   A  +  EM  
Sbjct: 170 INGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRA 229

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G+ PN VTF++++D  CK+  +  A ++   M + GV+PN   YN+L++G C  G+VN 
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M +   K N+ +++ L+NG+CKNK ++ A  L+ +M  +GI P V TYN L  
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              +   +E AF L+  M   GV  D   Y   I GLC+ G +  A  L   +     + 
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ LID LC  G +K A  L   + R  L    +TYN MI   C +G +  A +L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ME  G   +   +N L+ G  + ++      LL+ M E+
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 192/356 (53%), Gaps = 9/356 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT---IVALNLFEEMINGNGEFGVVCKP 58
           +A  +   +K  G   NVITY+TLI+G C+ G       A  + +EM   +G    +C P
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM-RADG----IC-P 234

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           + V +  +IDG CK+  V  A ++  +M  + + P+VVTYNS+I G C     NEA  L 
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M++  ++PN++T + +++  CKN  +++A +L + M + G+ PN   YN L+D +C  
Sbjct: 295 DQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             +  A  L+  M   G   +V +Y+ LI G C+  ++E A +L SEM +K +K  ++TY
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L    ++++A +L DEM R G+      Y T IDG CK G +  AL L   +  
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           +    ++ +Y+ LI G CK  +L+ A  L + +    LI + +TY I+   +   G
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 186/361 (51%), Gaps = 38/361 (10%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E   +  D  +   V + N ++ G     +  + + ++ EM+ + ++P +++F+++++ L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAKELFVSMESMGCK 197
           CK GK+ +A  ++E M   GV  N   YNTL+DG+C  G++    +A  +   M + G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE---------- 247
            N  +++ILI+G+CK+K +  A+ +++EM  +G+KP VVTYN+L  GL            
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 248 --------------IHQ-----------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                          H            V++A +LFD+M + G+  +   Y   ID  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           +  + +A  L+R +       D+ +Y+CLI GLC+ G L+ A  L   +    L AD++T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           YNI+I +LC  G+M KA  L  +M  KG+ P  + +NT++ G  +       + L  +M+
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473

Query: 403 E 403
           +
Sbjct: 474 K 474



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 157/292 (53%), Gaps = 5/292 (1%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F    D G++ +V + + +M  L K G++ +   + + MI+  + P    +N +++G C 
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG---ALSLYSEMLSKGIKPT 234
            G++N+A ++   M+  G   NV +Y+ LI+GYCK  +I     A ++  EM + GI P 
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VT+N L  G  +   V  A K+F EM R GV  +   Y + I+GLC NG + EA  L R
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-R 294

Query: 295 TLRILKC-ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
              +  C + +I +++ L++G CK+  +K A ELF  +P+  +  +V TYNI+I A C D
Sbjct: 295 DQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M+ A  L+  M  KGV PD   +N L+ G  R  +      L+  MD ++
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 41/322 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  +++A G  PN +T++ LI+G C+  +   A+ +F EM N  G      KP+ V
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM-NRQG-----VKPNVV 272

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC  G V++A  L  QM +  + P+++T+N+++ GFC      +A  LF +M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PNV T+++++D  CK+  ME+A  L  +M+  GV P+   YN L+ G C  G +
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 182 NRAKELFVSMESMGCKHNVFSYSILI---------------------------------- 207
             A+ L   M++   K ++ +Y+ILI                                  
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 208 -NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            +GYCK   +  AL+L S+M   G    V TYN L  G  +  ++E A  L +EM   G+
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 267 AADTWAYRTFIDGLCKNGYIVE 288
             +   Y    + + + G++ +
Sbjct: 513 IPNRMTYEIVTEEMMEKGFVPD 534



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 5/266 (1%)

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           N   +E +Q+L  +       N+ + + L+  +    R     E F      G K +V S
Sbjct: 71  NYSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTS 130

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
            + L++G  K  EI     +Y EM+ + I+PT++++N +  GL ++ ++ +A  + ++M+
Sbjct: 131 CNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK 190

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK----CELDIRSYSCLIDGLCKS 318
             GV+A+   Y T IDG CK G I +  +    L+ ++    C  ++ +++ LIDG CK 
Sbjct: 191 VRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV-TFNILIDGFCKD 249

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             +  A ++F  + R  +  +VVTYN +I+ LC +GK+++A  L   M    + P+ +  
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           N L+ G  +N    +  EL   M ++
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQ 335


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +L    L+ DV TY++M   L   G +++  DLFL ME  G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    N+++   ++  + ++    L  +DE++
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 222/462 (48%), Gaps = 74/462 (16%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+ GLC    +  AL L + M +  G+    C PD V YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG +DKA     +M D+ I P+VVTY+S+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSY-----------------------------------SILINGY 210
           ++F SM   G K  + +Y                                   SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ P  VTY T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI +YS LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 214/450 (47%), Gaps = 76/450 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+                
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 106 -----------------CYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             YA     ++A  +F +M  QG+ P+ VT+  ++  LCK+G++
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL----------------------------------- 171
           E+A +  E MI   + P   VYN+L                                   
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  +++LF  M  +G K ++ +YS LI+GYC   +++ A  L + M+S G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  G  +I ++E A  LF EM+  GV+ D   Y   + GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +     +L++ +Y+ ++ GLCK+     A  +F +L    L  +  T+NIMI AL 
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             G+ D+A DLF  + A G+ PD   ++ +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 13/402 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++AKEL + M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSI-IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +    
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D+A 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
            +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 640 RMFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 680



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 208/443 (46%), Gaps = 50/443 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   PN+ TY  LI   C  G   +       +I     F V    D
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKG--FRV----D 125

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M      P+V +YN +++G C  N S EA  L 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 118 ------------------------------------FIEMMDQGVQPNVVTFSVIMDELC 141
                                               + EM+D+G+ PNVVT+S I+  LC
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K   M++A ++L  M++ GV PN   YN+++ G+C +G+   A      M S G + +V 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R+G+  + + +   I    K G + +A+ +F  +R      D  +Y  +I  LCKSGR+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A   F  +    L    + YN +IH+LC   K DKA +L L+M  +G+  D + FN++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 382 MLGCIRNN---ETSKVVELLHRM 401
           +    +     E+ K+ +L+ R+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRI 508



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 158/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTY+++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LF ++ + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +L    L+ DV TY++M   L   G +++  DLFL ME  G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    N+++   ++  + ++    L  +DE++
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 222/462 (48%), Gaps = 74/462 (16%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+ GLC    +  AL L + M +  G+    C PD V YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG +DKA     +M D+ I P+VVTY+S+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSY-----------------------------------SILINGY 210
           ++F SM   G K  + +Y                                   SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ P  VTY T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI +YS LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 214/450 (47%), Gaps = 76/450 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+                
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 106 -----------------CYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             YA     ++A  +F +M  QG+ P+ VT+  ++  LCK+G++
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL----------------------------------- 171
           E+A +  E MI   + P   VYN+L                                   
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  +++LF  M  +G K ++ +YS LI+GYC   +++ A  L + M+S G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  G  +I ++E A  LF EM+  GV+ D   Y   + GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +     +L++ +Y+ ++ GLCK+     A  +F +L    L  +  T+NIMI AL 
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             G+ D+A DLF  + A G+ PD   ++ +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 13/402 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++AKEL + M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSI-IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +    
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D+A 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
            +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 640 RMFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 680



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 210/447 (46%), Gaps = 58/447 (12%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP- 58
           A + + ++   G +   PN+ TY  L+   C  G     L+L      G    G V K  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGR----LDL------GFAALGNVIKKG 121

Query: 59  ---DAVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEA 114
              DA+ +T ++ GLC +     A +++L+ M      P+V +YN +++G C  N S EA
Sbjct: 122 FIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEA 181

Query: 115 KRL-------------------------------------FIEMMDQGVQPNVVTFSVIM 137
             L                                     + EM+D+G+ PNVVT+S I+
Sbjct: 182 LELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSII 241

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LCK   M++A ++L  M++ GV PN   YN+++ G+C +G+   A      M S G +
Sbjct: 242 AALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE 301

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L
Sbjct: 302 PDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 361

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            D M R+G+  + + +   I    K G + +A+ +F  +R      D  +Y  +I  LCK
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCK 421

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           SGR++ A   F  +    L    + YN +IH+LC   K DKA +L L+M  +G+  D + 
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481

Query: 378 FNTLMLGCIRNN---ETSKVVELLHRM 401
           FN+++    +     E+ K+ +L+ R+
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRI 508



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  ++   C A   +        ++ +G   + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTY+++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LF ++ + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 219/437 (50%), Gaps = 43/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  +++A GCEP+++TY+ LIN +C  G    ALN+   + +        CKPDAV
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG------CKPDAV 357

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++  LC      + +ELL +M   N  PD VT+N+++   C     + A  +   M
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   ++VT+S I+D LC  G++++A +LL  +   G +P+   Y T++ G C T + 
Sbjct: 418 SEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477

Query: 182 NRAKELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
            RA+EL   M                                E M   GC  ++ +Y+ +
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C    I+ A+ L S++ S G KP +VT+NTL  GL  + + E A +L   M R   
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   + T I  LC+ G + +A+E  + +    C  +  +YS ++D L K+G+ + A E
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +  G    D++TYN +I  L   GKM++A DL   M + G+ PD   + +L  G  
Sbjct: 658 LLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715

Query: 387 RNNETSKVVELLHRMDE 403
           R + T + V +L R+ +
Sbjct: 716 REDGTDRAVRMLRRVQD 732



 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 210/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+F  +   GC P+V+TYS L++  C+      A+ L +EM    G     C+PD V
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM-RAKG-----CEPDIV 322

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ +C EG VD+A  +L  +      PD VTY  V++  C +    E + L  EM
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEM 382

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+ VTF+ I+  LC+ G ++ A ++++ M + G   +   Y++++DG C  GRV
Sbjct: 383 TSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRV 442

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++S GCK +  +Y+ ++ G C  ++ E A  L +EML     P  VT+NT+
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTV 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V+RA ++ ++M  +G + D   Y   IDGLC    I +A+EL   L+   C
Sbjct: 503 VASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGC 562

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +++ L+ GLC   R + A +L  ++ R     D +T+N +I +LC  G + +A +
Sbjct: 563 KPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIE 622

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               M   G  P+   ++ ++   ++  +    +ELL  M
Sbjct: 623 TLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 190/387 (49%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  T++ LI  LC  G    AL +F++M++        C P  V Y+ ++D  CKE   
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGY 302

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  LL +M+ K   PD+VTYN +I   C   D +EA  +   +   G +P+ VT++ +
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC + + +E  +LL  M      P+   +NT++   C  G V+RA E+   M   GC
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++ +YS +++G C    ++ A+ L S + S G KP  + Y T+  GL    Q ERA +
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  EM       D   + T +  LC+ G +  A+ +   +    C  DI +Y+C+IDGLC
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
               +  A EL   L       D+VT+N ++  LC   + + A  L  +M      PD +
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FNT++    +    ++ +E L  M E
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAE 629



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 194/370 (52%), Gaps = 8/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L ++LK++GC+P+ I Y+T++ GLC T     A  L  EM+  +      C PD V
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD------CPPDEV 497

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++  LC++G VD+A  ++ QM +   +PD+VTYN +I G C  +  ++A  L  ++
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VTF+ ++  LC   + E+A QL+  M++    P+   +NT++   C  G +
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E    M   GC  N  +YSI+++   K  + + AL L S M +    P ++TYNT+
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A  L   M  +G+  DT  YR+   G+C+      A+ + R ++    
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+ ++ G C+  R  +A + F  +     + D  TY I++ AL   G +D+A  
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795

Query: 362 LFLDMEAKGV 371
           L   + + GV
Sbjct: 796 LLASLCSLGV 805



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 199/420 (47%), Gaps = 49/420 (11%)

Query: 2   EAAALFTKLKAFGCE--PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EA  LF  + + G    P V+  + LI  LC  G    A  +F  +    G    V    
Sbjct: 168 EALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL----GPSATV---- 219

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y T+++G C+ G ++ A+ L+  M      PD  T+N +IR  C      +A  +F 
Sbjct: 220 -VTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFD 275

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ +G  P+VVT+S+++D  CK     +A  LL+ M   G  P+   YN L++  C  G
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  +  ++ S GCK +  +Y+ ++   C ++  +    L +EM S    P  VT+N
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T+   L +   V+RA ++ D M  HG  AD   Y + +DGLC  G + +A+EL   L+  
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-------------------------PRG 334
            C+ D  +Y+ ++ GLC + + + A EL   +                          R 
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515

Query: 335 VLI----------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           + +           D+VTYN +I  LC +  +D A +L  D+++ G  PD V FNTL+ G
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 181/406 (44%), Gaps = 39/406 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++ +  C P+ +T++T++  LC+ G    A+ + + M     E G  C  D V
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM----SEHG--CVADIV 427

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++I+DGLC  G VD A ELL ++K     PD + Y +V++G C       A+ L  EM
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P+ VTF+ ++  LC+ G ++ A +++E M + G  P+   YN ++DG C    +
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCI 547

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++S GCK ++ +++ L+ G C     E A  L + M+     P  +T+NT+
Sbjct: 548 DDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV---------------------------------AA 268
              L +   + +A +    M  +G                                    
Sbjct: 608 ITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTP 667

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y T I  L K G + EAL+L R +       D  +Y  L  G+C+      A  + 
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             +    L  D   YN ++   C D + D A D F  M + G  PD
Sbjct: 728 RRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPD 773


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 219/392 (55%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+D  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ P ++TYN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +   Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L K GR   A +LF +L    L+ DV TY++M   L   G +++  DLFL ME  G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    N+++   ++  + ++    L  +DE++
Sbjct: 723 NSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 222/462 (48%), Gaps = 74/462 (16%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+ GLC    +  AL L + M +  G+    C PD V YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG +DKA     +M D+ I P+VVTY+S+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSY-----------------------------------SILINGY 210
           ++F SM   G K  + +Y                                   SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ P  VTY T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI +YS LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M+ A  LF +ME+ GV+PD + +N ++ G  +   T+   EL
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 214/450 (47%), Gaps = 76/450 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+                
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 106 -----------------CYANDS--NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             YA     ++A  +F +M  QG+ P+ VT+  ++  LCK+G++
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 147 EEASQLLELMIQIGVRPNAFVYNTL----------------------------------- 171
           E+A +  E MI   + P   VYN+L                                   
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  +++LF  M  +G K ++ +YS LI+GYC   +++ A  L + M+S G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  G  +I ++E A  LF EM+  GV+ D   Y   + GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L+  +     +L++ +Y+ ++ GLCK+     A  +F +L    L  +  T+NIMI AL 
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             G+ D+A DLF  + A G+ PD   ++ +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLM 695



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 13/402 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++AKEL + M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSI-IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ A KL   M   G+  D   Y T I+G CK   + +AL LFR +    
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D+A 
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
            +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 640 RMFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 680



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 208/443 (46%), Gaps = 50/443 (11%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A + + ++   G +   PN+ TY  LI   C  G   +       +I     F V    D
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKG--FRV----D 125

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRL- 117
           A+ +T ++ GLC +     A +++L+ M      P+V +YN +++G C  N S EA  L 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 118 ------------------------------------FIEMMDQGVQPNVVTFSVIMDELC 141
                                               + EM+D+G+ PNVVT+S I+  LC
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K   M++A ++L  M++ GV PN   YN+++ G+C +G+   A      M S G + +V 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CKN     A  ++  M  +G+KP + TY TL  G      +     L D M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R+G+  + + +   I    K G + +A+ +F  +R      D  +Y  +I  LCKSGR+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A   F  +    L    + YN +IH+LC   K DKA +L L+M  +G+  D + FN++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 382 MLGCIRNN---ETSKVVELLHRM 401
           +    +     E+ K+ +L+ R+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRI 508



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 158/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTY+++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A  L   M++      V  KPD 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   +EA ++ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + AK+LF ++ + G   +V +YS++     +   +E    L+  M   G        N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 211/395 (53%), Gaps = 7/395 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  + A GC PNV +YS LI GLCR      A  L  EMI+G  +      P+ V
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVV 123

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GLCK G + +A +L  +M  +   PD V YN +I GF    D  EA RLF EM
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P V T++ ++    + G+      L + M++ G  PN F +N L+DGFC  G +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF+ M S+GC  +V SY+ L+ G C   +   A  L  EM+  G+ P +V+YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A KLF E+ + G+  D ++Y T ID LC+ G +  A  +F+ +     
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D      L+ GLC+  RL  + ELF ++ +   +  +  YN++++ LC   + D   +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +F ++  +G +PD V  + ++L  +R ++  +  E
Sbjct: 424 IFHELTERGFSPD-VEISKVILETLRRSDDKEAAE 457



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 196/384 (51%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
             ++Y+ L+  L ++G        + +M+      G  C P+   Y  ++  LC+    +
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDML------GAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A+ +   M  +  +P+V +Y+ +I G C     +EA  L  EM+D G QPNVVT+  ++
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LCK GK++EA  L   M+  G  P+  VYN L+DGF   G +  A  LF  M   GC 
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             VF+Y+ L++G+ +  E     SL+ +ML +G  P + T+N L  G  ++  +  A +L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F EM+  G   D  +Y T + G+C  G   EA  L R +       DI SY+ LIDG  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           SG L  A +LF+ +P+  L  D  +Y+ +I  LC  GK+  A  +F DM A G APD   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
              L++G  R    ++  EL   M
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAM 393



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 198/392 (50%), Gaps = 6/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN  TY  L+  LC+      A ++F  M          C P+   Y+ +I GLC+ 
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG------CSPNVFSYSILIAGLCRG 100

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD+A ELL +M D    P+VVTY S++ G C      EA  LF  M+ +G  P+ V +
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V++D   K G M EA +L E M++ G  P  F YN+L+ GF   G   R + LF  M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N+F+++ L++G+CK  ++  A  L+ EM S G  P VV+YNTL  G+    +   
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L  EM R GV  D  +Y   IDG  K+G +  A++LF  +     E D  SYS +ID
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LC++G++  A+ +F  +       D      ++  LC   ++ ++ +LF  M      P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               +N LM    +   +  V E+ H + ER 
Sbjct: 401 LIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           + N   ++YN ++     +   +     + +M+  G  PN  T+  ++  LC+  + EEA
Sbjct: 12  HYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEA 71

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +   M   G  PN F Y+ L+ G C   +V+ A EL   M   G + NV +Y  L++G
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG 131

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK  +++ A+ L+S M+ +G  P  V YN L  G  +   +  A++LF+EM   G    
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            + Y + + G  + G       LF+ +    C  +I +++ L+DG CK G +  A  LF 
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +       DVV+YN ++  +C+ GK  +A  L  +M   GV PD V++N L+ G  ++ 
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 390 ETSKVVELLHRMDE 403
                ++L + + +
Sbjct: 312 ALDHAIKLFYEIPK 325



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q+        YN L++    +GR +     +  M   GC  N ++Y  L+   C+ +  E
Sbjct: 10  QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A S++  M ++G  P V +Y+ L  GL    +V+ A +L +EM   G   +   Y + +
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVL 336
            GLCK G + EA++LF  +    C  D   Y+ LIDG  K G +  A+ LF   L +G +
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 337 ----------------------------------IADVVTYNIMIHALCADGKMDKAHDL 362
                                             + ++ T+N ++   C  G M +AH L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           FL+M + G  PD V++NTLM G     +  +   LL  M
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 6/219 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++++ GC P+V++Y+TL+ G+C  G    A  L  EMI      GV   PD 
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS----GV--GPDI 297

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDG  K G +D A +L  ++    + PD  +Y+++I   C A     A  +F +
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P+      ++  LC+  ++ E+ +L + M++    P    YN LM   C   R
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
            +   E+F  +   G   +V    +++    ++ + E A
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%)

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            ++YN L   L +  + +  +  +++M   G   +T+ Y   +  LC+     EA  +FR
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  ++ SYS LI GLC+  ++  A EL + +  G    +VVTY  ++  LC  G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+ +A DLF  M  +G  PD V +N L+ G  +  +  +   L   M E+ 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  240 bits (613), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 227/433 (52%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG----NGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G  +    L + M+ NG    +  F + +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+ V Y  +I  LCK G VD A     QM D+ + 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++ Y S+I   C  +  ++A+ L +EM+D+G+  N + F+ I+   CK G++ E+ +L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S+G K +  +Y+ LINGYC+
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + + G   +   
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I  L K GR   A +LF +  
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFS 678

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ +  TY +M   +   G +++   LF  ME  G   D    N ++   ++  E +
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEIT 738

Query: 393 KVVELLHRMDERN 405
           +    L  +DE++
Sbjct: 739 RAGTYLSMIDEKH 751



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 212/422 (50%), Gaps = 41/422 (9%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T+ING  + G +  A + + EM++          PD V Y++II  L
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR------ISPDVVTYSSIIAAL 241

Query: 71  CKEGFVDKAKELLL-----------------------------------QMKDKNINPDV 95
           CK   +DKA E+L                                    +M+   + PDV
Sbjct: 242 CKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDV 301

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VTYNS++   C    S EA+++F  M  +G++P++ T+  ++      G + E   LL+L
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G+ P+  V+N L+  +    +V+ A  +F  M   G   NV +Y  +I   CK+  
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+  + +M+ +G+ P ++ Y +L   L    + ++A +L  EM   G+  +T  + +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I   CK G ++E+ +LF  +  +  + ++ +YS LIDG C +G++  A +L  S+    
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D VTYN +I+  C   +MD A  LF +M + GV+P+ + +N ++ G      T+   
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 396 EL 397
           EL
Sbjct: 602 EL 603



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 202/431 (46%), Gaps = 38/431 (8%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++    C P+V + + L+ GLC    +  AL L   M +  G       PD V YTT
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG  DKA     +M D+ I+PDVVTY+S+I   C     ++A  +   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN +T++ I+   C + + +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F SM   G + ++ +Y  L+ GY     +    +L   M+  GI P    +N L    
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V+ A  +F +M++HG+  +   Y   I  LCK+G + +A+  F  +       +I
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 306 RSYSCLIDGL-----------------------------------CKSGRLKIAWELFHS 330
             Y+ LI  L                                   CK GR+  + +LF  
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R  +  +V+TY+ +I   C  GKMD+A  L   M + G+ PDCV +NTL+ G  R + 
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 391 TSKVVELLHRM 401
               + L   M
Sbjct: 562 MDDALALFKEM 572



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 199/394 (50%), Gaps = 11/394 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G     IT++ L+ GLC    T  A+++    +       + C PD    T ++ GLC E
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE-----LSCMPDVFSCTILLKGLCDE 171

Query: 74  GFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
               +A ELL  M D       PDVV+Y +VI GF    DS++A   + EM+D+ + P+V
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDV 231

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT+S I+  LCK   M++A ++L  M++ GV PN   YN+++ G+C + +   A      
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M S G + +V +Y+ L++  CKN     A  ++  M  +G++P + TY TL  G      
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +     L D M R+G+  D   +   I    K   + EA+ +F  +R      ++ +Y  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +I  LCKSG +  A   F  +    L  +++ Y  +IH+LC   K DKA +L L+M  +G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 371 VAPDCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
           +  + + FN+++    +     E+ K+ +L+ R+
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 204/393 (51%), Gaps = 11/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TY++L++ LC+ G +  A  +F+ M     E      PD  
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE------PDIA 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+PD   +N +I  +      +EA  +F +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVVT+  ++  LCK+G +++A    E MI  G+ PN  VY +L+   C+  + 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP V+TY+TL
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  D   Y T I+G C+   + +AL LF+ +     
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ ++ GL  + R   A EL+  + +     ++ TYNI++H LC +   D+A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCI----RNNE 390
           +F ++    +  +   FN +M+G +    RN+E
Sbjct: 638 MFQNLCLTDLQLETRTFN-IMIGALLKVGRNDE 669



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 4/329 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I   C+ G +D     L  +  K    + +T+  +++G C    +++A  +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMD 173
            +  M +    P+V + ++++  LC   + +EA +LL +M      G  P+   Y T+++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF   G  ++A   +  M       +V +YS +I   CK + ++ A+ + + M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             +TYN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA ++F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            ++     E DI +Y  L+ G    G L     L   + R  +  D   +NI+I A    
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            K+D+A  +F  M   G+ P+ V +  ++
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 33/280 (11%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P V T+ +++   C+ G+++     L  +++ G R  A  +  L+ G C   R + A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++ +  M  + C  +VFS +IL+ G C     + AL L                      
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL---------------------- 180

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                       +  + +  G A D  +Y T I+G  K G   +A   +  +   +   D
Sbjct: 181 ----------LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPD 230

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS +I  LCK   +  A E+  ++ +  ++ + +TYN ++H  C+  +  +A     
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M + GV PD V +N+LM    +N  +++  ++   M +R
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/419 (35%), Positives = 217/419 (51%), Gaps = 44/419 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF    A  C PN  TY  LI G    G   +A+ L EEM +   E       +AV
Sbjct: 40  EALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFE------GNAV 93

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT++ GLC  G V +A E    M  K+  PDV+TY +++   C A   +EA+ +  EM
Sbjct: 94  VHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREM 152

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-------------------- 161
           + QG  P+ VTFS ++D LCK G  E+A ++LE +IQ G+                    
Sbjct: 153 VAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNS 212

Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                            P   ++N +++GFC    ++ A +L   M   GC  NVF+++I
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G CK   +  A  L  +M+  G  P VVTY+T+  GL +  QV+ A++LF  M+R  
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   +   IDGLCK   I EA +L+  +R   C  DI +Y+ LIDGLCKS ++  A+
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 326 ELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           +LF ++P  GV  A+ VTY+ + H   A G+M  A  +F  +  KG +PD   + +L+L
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451



 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/410 (34%), Positives = 216/410 (52%), Gaps = 15/410 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---GNGEFGVVCKP 58
           EA  +  ++ A GC P+ +T+STLI+GLC+ G    A  + E++I    GN +       
Sbjct: 144 EAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD------- 196

Query: 59  DAVIYTTIIDGLC-KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
               + TII  LC K   V+ A ++L  +  K   P V+ +N VI GFC A D + A +L
Sbjct: 197 --AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKL 254

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M+++G  PNV TF++++  LCK  ++ EA QLLE M+  G  PN   Y+T+++G C 
Sbjct: 255 LEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCK 314

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V+ A ELF  ME   C  NV +++ILI+G CK K IE A  LY  M   G  P ++T
Sbjct: 315 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 374

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           YN+L  GL +  QV+ AF+LF  +   GV AA+   Y T   G    G + +A  +F  L
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +Y+ LI   CK+ R     EL   +        V T + ++  L      
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR-MDERN 405
           ++A  LF  M A+G   D + +N ++ G  R ++  K + +L + +D+R+
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRD 544



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 208/429 (48%), Gaps = 45/429 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PNV T++ LI GLC+      A  L E+M+ G       C P+ V Y+T+I+GLCK+
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG------CSPNVVTYSTVINGLCKQ 315

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD A EL   M+ +N  P+VVT+N +I G C A    EA++L+  M + G  P+++T+
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + ++D LCK+ +++EA QL + + + GV   NA  Y+TL  G+   GR+  A  +F  + 
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LI  YCK       + L  EM SKG  P V T + +  GLFE +  E
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDG--------------------------------- 279
           RA +LFD M   G   D   Y   ++G                                 
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 280 -----LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
                LC+ G   +A +L   +        + SY+ L+ GL +  R   A ++F ++   
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               ++ T N++I  LC+  K+D A++L   M   G  PD    NTL+ G  ++      
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 675

Query: 395 VELLHRMDE 403
            +LL  M E
Sbjct: 676 RKLLEEMTE 684



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 194/412 (47%), Gaps = 45/412 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   GC PNV+TYST+INGLC+ G    A  LF+ M   N      C P+ V
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 338

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +IDGLCK   +++A++L  +M++    PD++TYNS+I G C +   +EA +LF  +
Sbjct: 339 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398

Query: 122 MDQGVQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + GV   N VT+S +       G+M +A ++  +++  G  P+   Y +L+  +C T R
Sbjct: 399 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 458

Query: 181 V-----------------------------------NRAKELFVSMESMGCKHNVFSYSI 205
                                                RA +LF SM + GC  +   Y++
Sbjct: 459 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 518

Query: 206 LINGYCKNKEIEGALSLYSEMLSK---GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ G  +  + + AL++  +++ K      P+    + L   L ++ + + A +L  +M 
Sbjct: 519 VVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMS 578

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G AA   +Y   + GL +     EA ++F  +       +I + + +I  LC + ++ 
Sbjct: 579 ERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVD 638

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            A+EL   + +     D+ T N +I   C  G+ D A  L  +M   G+ P+
Sbjct: 639 DAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 174/373 (46%), Gaps = 37/373 (9%)

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           +D LC+     +A  L      +   P+  TY  +IRGF  A D + A +L  EM   G 
Sbjct: 29  LDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGF 88

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           + N V  + +M  LC  G++ EA +    M +    P+   Y  L+   C  G+ + A+ 
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 187 LFVSMESMGCKHNVFSYSILINGYCK---------------------------------- 212
           +   M + GC  +  ++S LI+G CK                                  
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 207

Query: 213 NK--EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           NK   +E A  +   +++KG  PTV+ +N +  G  +   ++ A+KL + M   G   + 
Sbjct: 208 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 267

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           + +   I GLCK   + EA +L   + +  C  ++ +YS +I+GLCK G++  A+ELF  
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R     +VVT+NI+I  LC   ++++A  L+  M   G APD + +N+L+ G  ++ +
Sbjct: 328 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387

Query: 391 TSKVVELLHRMDE 403
             +  +L   + E
Sbjct: 388 VDEAFQLFQTIPE 400



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 37/358 (10%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L        +  +V + N  +   C  N   EA  LF   M +   PN  T+ +++    
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
             G ++ A QLLE M   G   NA V+ TLM G C  GRV  A E F +M +  C  +V 
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CK  + + A  +  EM+++G  P  VT++TL  GL +    E+AF++ +++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 262 QRHGVAADTWAYRTF------------------------------------IDGLCKNGY 285
            + G+     A+ T                                     I+G CK   
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  A +L   +    C  ++ +++ LI GLCK+ R+  A +L   +  G    +VVTY+ 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I+ LC  G++D A++LF  ME +   P+ V  N L+ G  +     +  +L HRM E
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 365



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 9/231 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V T S ++ GL    HT  A+ LF+ M          C  DA+IY  +++G+ + 
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARA 526

Query: 74  GFVDKAKELLLQM---KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
              DKA  +L Q+   +D+  NP     ++++   C    +++AK+L  +M ++G    V
Sbjct: 527 SKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAV 586

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +++ ++  L +  + +EA+Q+ E M+  G  P     N ++   C   +V+ A EL   
Sbjct: 587 SSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 646

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           M  +GC  ++ + + LI GYCK+   + A  L  EM   G++P   T++ L
Sbjct: 647 MSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 223/434 (51%), Gaps = 30/434 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVAL----------NLFEEMI 46
           EA  +F  +   G +PN+I+YSTL++G    G     +++V L            F  +I
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           N     G++ K              PD V + T+I  LC+ G +D A      M D  + 
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP-NVVTFSVIMDELCKNGKMEEASQ 151
           P    Y  +I+G C   +  +AK L  EMM++ + P  V  FS I++ L K G++ E   
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKD 459

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +++LM+Q G RPN   +N+LM+G+CL G +  A  L  +M S+G + N + Y  L++GYC
Sbjct: 460 IMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 519

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  I+ AL+++ +ML KG+KPT V YN +  GLF+  +   A K+F EM   G      
Sbjct: 520 KNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQ 579

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    EA  L   L  +  + DI +++ +I  + K GR + A ELF ++
Sbjct: 580 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAI 639

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+  V TYN+MI  L  +   ++A +LF+ +E  G APD    N ++   ++  E 
Sbjct: 640 STYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEV 699

Query: 392 SKVVELLHRMDERN 405
           +K    L  +DE N
Sbjct: 700 AKASNYLSIIDENN 713



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 200/396 (50%), Gaps = 16/396 (4%)

Query: 3   AAALFTKLKAFGCE------PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVV 55
           A  LF ++  + C       P + TY+ LI+   R     +AL +F  ++  G G     
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLG----- 154

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
             PD   Y T+IDG  KEG VDKA EL  +M +++++PDVVTYNS+I G C   +  +++
Sbjct: 155 --PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSE 212

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           R+  +M+D G++PN  T++ ++      G  +E+ ++ + M   G+ P     N+ +   
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   R+  AK++F SM   G K N+ SYS L++GY          SL + M+SKGI P  
Sbjct: 273 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 332

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             +N L         +++A  +F++MQ  G+  DT  + T I  LC+ G + +AL  F  
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADG 354
           +  +        Y CLI G C  G L  A EL    + + +    V  ++ +I+ L  +G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           ++ +  D+   M   G  P+ V FN+LM G C+  N
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGN 488



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 197/403 (48%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+      P+V+TY++LI+GLC+T   + +  + E+M++         +P+  
Sbjct: 175 KAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG------IRPNNK 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G    G   ++  +  +M    + P VV  NS I   C  N   EAK +F  M
Sbjct: 229 TYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN++++S ++      G     + L+ LM+  G+ PN   +N L++ +   G +
Sbjct: 289 VLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMM 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  +F  M++ G   +  +++ +I+  C+   ++ AL  ++ M+  G+ P+   Y  L
Sbjct: 349 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY-RTFIDGLCKNGYIVEALELFRTLRILK 300
             G     ++ +A +L  EM    +      Y  + I+ L K G + E  ++   +    
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTG 468

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +++ L++G C  G ++ A+ L  ++    +  +   Y  ++   C +G++D A 
Sbjct: 469 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +F DM  KGV P  V +N ++ G  +   T+   ++ H M E
Sbjct: 529 TVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 7/134 (5%)

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCE------LDIRSYSCLIDGLCKSGRLKIAWEL 327
           R      C +G  + A+ELF+ +    C         I +Y+ LID   +  R ++A  +
Sbjct: 86  RAPPSAACSDGPAL-AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAV 144

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  L R  L  DV +YN +I     +G++DKA++LF  M  + V+PD V +N+L+ G  +
Sbjct: 145 FGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCK 204

Query: 388 NNETSKVVELLHRM 401
             E  K   +L +M
Sbjct: 205 TKEMVKSERVLEQM 218


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 211/384 (54%), Gaps = 22/384 (5%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F  E   IT++ L+ GLC    T  A+++    +    E G  C P+   Y  +++GL
Sbjct: 116 KGFRVE--AITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGL 168

Query: 71  CKEGFVDKAKELLLQMKDK---NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           C E    +A ELL  M D       PDVV+Y +VI GF    DS++A   + EM+D+G+ 
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228

Query: 128 PNVVTFSVIMDELCKN------------GKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           P+VVT+S I+  LCK             G++ E+ +L +LM++IGV+P+   Y+TL+DG+
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 288

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           CL G+++ A +L   M S+G K N  +YS LINGYCK   +E AL L+ EM S G+ P +
Sbjct: 289 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 348

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           +TYN +  GLF+  +   A +L+  +   G   +   Y   + GLCKN    +AL++F+ 
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           L ++  +L+ R+++ +ID L K GR   A +LF +     L+ +  TY +M   +   G 
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 468

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFN 379
           +++   LFL ME  G   D    N
Sbjct: 469 LEELDQLFLSMEDNGCTVDSGMLN 492



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 170/346 (49%), Gaps = 50/346 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC PNV +Y+ L+NGLC    +  AL L   M +   + G    PD V YTT
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD---DRGGGSPPDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN------------E 113
           +I+G  KEG  DKA     +M D+ I PDVVTY+S+I   C     +            E
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIE 261

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           +++LF  M+  GV+P+++T+S ++D  C  GKM+EA +LL  M+ +G++PN   Y+TL++
Sbjct: 262 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 321

Query: 174 GFC-----------------------------------LTGRVNRAKELFVSMESMGCKH 198
           G+C                                    T R   AKEL+V +   G + 
Sbjct: 322 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 381

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            + +Y+I+++G CKNK  + AL ++  +    +K    T+N +   L ++ + + A  LF
Sbjct: 382 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 441

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +G+  + W YR   + +   G + E  +LF ++    C +D
Sbjct: 442 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 487



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A+ L   M++      V  KP+ 
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 313

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   ++A Q+ + +  + ++  A  +N ++D     GR
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 433

Query: 181 VNRAKELFVSMESMGCKHNVFSYSIL 206
            + AK+LFV+  S G   N ++Y ++
Sbjct: 434 NDEAKDLFVAFSSNGLVPNYWTYRLM 459



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 23/325 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCR------------TGHTIVALNLFEEMINGN 49
           +A + + ++   G  P+V+TYS++I  LC+             G  I +  LF+ M+   
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMV--- 270

Query: 50  GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN 109
              GV  KPD + Y+T+IDG C  G +D+A +LL  M    + P+ VTY+++I G+C  +
Sbjct: 271 -RIGV--KPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 327

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
              +A  LF EM   GV P+++T+++I+  L +  +   A +L   + + G +     YN
Sbjct: 328 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 387

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            ++ G C     + A ++F ++  M  K    +++I+I+   K    + A  L+    S 
Sbjct: 388 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 447

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV-- 287
           G+ P   TY  +   +     +E   +LF  M+ +G   D+      +  L + G +V  
Sbjct: 448 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGVVVVV 507

Query: 288 ---EALELFRTLRILKCELDIRSYS 309
               A     TL+IL C + +  +S
Sbjct: 508 SGESATTPPPTLKILTCGITVNPFS 532



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 55/345 (15%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG---VRPNAFVYN 169
           +A+ +F E++ +G   ++   +  + ++ ++      S+    M + G   V P+   Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------- 222
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +       
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 223 ---------YSEMLS-----------------------KGIKPTVVTYNTLFIGLFEIHQ 250
                    Y+ +L+                        G  P VV+Y T+  G F+   
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN------------GYIVEALELFRTLRI 298
            ++A+  + EM   G+  D   Y + I  LCK             G ++E+ +LF  +  
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVR 271

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI +YS LIDG C +G++  A +L   +    L  + VTY+ +I+  C   +M+ 
Sbjct: 272 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 331

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  LF +ME+ GV+PD + +N ++ G  +   T+   EL  R+ E
Sbjct: 332 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 376



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 8/195 (4%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAY 273
           E A  ++ E+L +G   ++   N     +   H    A   ++ M R G   V  D   Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL-FHSLP 332
              I   C+ G +         +      ++  +++ L+ GLC   R   A ++    + 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLF---LDMEAKGVAPDCVAFNTLMLGCIRNN 389
               I +V +YN +++ LC + +  +A +L     D    G  PD V++ T++ G  +  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 390 ETSKVVELLHRMDER 404
           ++ K     H M +R
Sbjct: 211 DSDKAYSTYHEMLDR 225


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 11/385 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++      PNV+TY+ LI+GLC+ G    A+ L  +M          C P AV
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK     +A +LL +M      PD+ TY ++I GFC +  S++A R+F ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           + +G +P+VVT+S ++D LCK G+++EA  L   MI+ G   PN   YN+L+ GFC  G+
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M   G   +V +Y+ L+NG+CK   ++ A  L ++M  KG+ P VVT+ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL   +++  A  +  EM+R   +   + Y T +DG C+   + EA +    L  + 
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ S++ +I GLCK  R   A EL     R     DVV Y  +I  LC + K+D+A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 361 DLFLDM-EAKGVAPDCVAFNTLMLG 384
            ++  M E  G  P+ + ++TL+ G
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLITG 439



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 221/405 (54%), Gaps = 11/405 (2%)

Query: 1   MEAAALFT-KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +E A +F  K+ + G  P+V TY+ +I+ LC       A    EEM N N        P+
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN------LTPN 80

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V YT +IDGLCK G VD+A  LL +M+ K + P  VTYNS+I G C A  ++EA  L  
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G  P++ T++ ++   CK+ K ++A ++ E ++  G RP+   Y+ L+DG C  G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 180 RVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           R+  A +LF  M +S  C  N  +Y+ LI+G+C+  +++ A++L   M   G  P VVTY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  G  ++ +++ A+ L ++M R G+  D   + + +DGLC+   + +A+ +   +R 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C   + +Y+ ++DG C++ +L+ A +    L       +VV++NIMI  LC   +  +
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A +L  +   +   PD V + T++ G  R  +  +   +  +M E
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 199/349 (57%), Gaps = 3/349 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C  D V YT++I GLCK   +++A   L +M  K  +PDV TY +VI   C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +   EM ++ + PNVVT++V++D LCK G+++EA  LL  M +  V P A  YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   R + A +L   M   GC  ++F+Y+ LI G+CK+K+ + AL ++ +++++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFR 294
           VTY+ L  GL +  +++ A  LF  M + G    +T  Y + I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+ +Y+ L++G CK  RL  A++L + + R  L  DVVT+  ++  LC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE-LLHRMD 402
           ++  A  +  +M  K  +P    +NT++ G  R N+  +  + +L  MD
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 177/331 (53%), Gaps = 12/331 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L A G  P+V+TYS LI+GLC+ G    A++LF  MI         C P+ V
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPNTV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G C+ G +D+A  LL +M +   +PDVVTY +++ GFC     ++A  L  +M
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ +MD LC+  ++ +A  +L  M +    P  + YNT++DG+C   ++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++    +E M C  NV S++I+I G CK      A+ L  E   +   P VV Y T+
Sbjct: 343 EEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             GL    +V+ A +++ +M +  G   ++  Y T I GLC  G +  A           
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----G 456

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           C  +I +Y+ LID   K+ R + A EL   +
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 159/315 (50%), Gaps = 2/315 (0%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           + D VTY S+I+G C      +A     +M+ +G  P+V T++ ++  LC   ++ EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            LE M    + PN   Y  L+DG C  GRV+ A  L   M    C     +Y+ LI+G C
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLC 126

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +    A  L  EM+  G  P + TY TL  G  +  + + A ++F+++   G   D  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 272 AYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            Y   IDGLCK G + EA++LF R ++   C  +  +Y+ LI G C+ G++  A  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +       DVVTY  +++  C   ++D A+DL   M  KG+ PD V F +LM G  R N 
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 391 TSKVVELLHRMDERN 405
            S  V +L  M  ++
Sbjct: 307 LSDAVHILGEMRRKS 321



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 150/295 (50%), Gaps = 37/295 (12%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----- 55
           EA  LF ++ K+  C PN +TY++LI+G CR G    A+NL E M        VV     
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 56  ----CK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
               CK                    PD V +T+++DGLC+E  +  A  +L +M+ K+ 
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P V TYN+++ G+C AN   EA++  +E MD    PNVV+F++++  LCK  +  EA +
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGY 210
           L+E   +    P+  +Y T++DG C   +V+ A  ++  M E  GC  N  +YS LI G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           C      G L      + KG  P + TYN L     + ++ E A +L D+M + G
Sbjct: 441 CN----AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 219/401 (54%), Gaps = 6/401 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L  ++++ G +PN+ TY+  I  L R G    A  + + M +        C PD V YT
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG------CGPDVVTYT 303

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +ID LC  G +D A EL ++MK  +  PD VTY +++  F    D    K  + EM   
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+V+TF+++++ LCK G ++EA  LL++M + GV PN   YNTL+ G     R++ A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +LF +ME++G     ++Y + I+ Y K+   + AL  + +M  +GI P +V  N     
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EA+EL   +   +CE D
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I   + LI+ L K+GR+  AW++F  L    L   VVTYN +I  L  +G++ +A +LF 
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M   G  P+ + FNT++    +N+E    +++L++M   N
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 221/433 (51%), Gaps = 34/433 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA  +  +++  GC P+V+TY+ LI+ LC  G    A+ LF +M   +            
Sbjct: 282 EACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML 341

Query: 50  ------GEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 G+ G V +           PD + +T +++ LCK G +D+A  LL  M+ + + 
Sbjct: 342 DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL 401

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++ TYN++I G    N  ++A  LF  M   GV P   T+ + +D   K+G+ ++A + 
Sbjct: 402 PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALET 461

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M   G+ PN    N  +      GR+  AK +F  ++S G   +  +Y++++  Y K
Sbjct: 462 FEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK 521

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A+ L S+M     +P ++  N+L   L++  +V+ A+K+F  ++   +A     
Sbjct: 522 AGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVT 581

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I GL K G +  A+ELF ++    C  +  +++ ++D LCK+  + +A ++ + + 
Sbjct: 582 YNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN--- 389
               + DV+T+N +IH L  + ++  A  LF  M+ K + PDCV   TL+ G ++N    
Sbjct: 642 TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLME 700

Query: 390 ETSKVVE-LLHRM 401
           +  K+ E  +HR+
Sbjct: 701 DAFKIAEDFVHRL 713



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 193/376 (51%), Gaps = 6/376 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F K++  G   N  +Y+ LI+ L ++G    AL ++  M+          KP    ++ +
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEG------LKPSLKTFSAL 235

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           +    K    +  K LL +M+   + P++ TY   IR    A   +EA R+   M D G 
Sbjct: 236 MVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGC 295

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+VVT++V++D LC  GK+++A +L   M     +P+   Y T++D F   G + R KE
Sbjct: 296 GPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKE 355

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            +  ME+ G   +V +++IL+N  CK   I+ A  L   M  +G+ P + TYNTL  GL 
Sbjct: 356 FWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLL 415

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
            +++++ A  LF+ M+  GV    + Y  FID   K+G   +ALE F  ++I     +I 
Sbjct: 416 RVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIV 475

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           + +  +  L + GRL+ A  +F+ L    L  D VTYN+M+      G++D+A +L  DM
Sbjct: 476 ACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM 535

Query: 367 EAKGVAPDCVAFNTLM 382
                 PD +  N+L+
Sbjct: 536 SENQCEPDIIVINSLI 551



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 173/333 (51%), Gaps = 7/333 (2%)

Query: 3    AAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A ++F +  K  G +P + +Y+ LI G     +  +A NLF EM N        C PD  
Sbjct: 773  AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG------CAPDVF 826

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++D   K G +++  EL  QM   +  P+ +T+N +I     +N  ++A  LF ++
Sbjct: 827  TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +     P   T+  ++D L K+G++EEA +L E M+  G RPN  +YN L++GF  TG V
Sbjct: 887  VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDV 946

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            N A ELF  M   G + ++ SY+ L+   C+   ++ AL  + ++   G+    + YN +
Sbjct: 947  NTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              GL   H++E A  L+DEMQ  G+  D + Y + I  L   G + +A +L+  L+ +  
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGL 1066

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
            E ++ +Y+ LI G   SG    A+ ++  +  G
Sbjct: 1067 EPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVG 1099



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 44/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
             A  LF  +   GC PN IT++T+++ LC+     +AL +  +M   N      C PD +
Sbjct: 597  RAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN------CMPDVL 650

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------FCYAND- 110
             + TII GL  E  V  A  L  QMK K + PD VT  +++ G          F  A D 
Sbjct: 651  TFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDF 709

Query: 111  ----SNEAKRLFIEMMDQGVQPNVVTFSVIM-------DELCKNG-----------KMEE 148
                     R F E +  G+     T   I+         +CK+G           K ++
Sbjct: 710  VHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQ 769

Query: 149  A----SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            A    S  +    ++GV+P    YN L++GF        A  LF  M++ GC  +VF+Y+
Sbjct: 770  ALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYN 829

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +L++ + K+ +I     LY +M+    KP  +T+N +   L + + +++A  LF ++   
Sbjct: 830  LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
              +     Y   +DGL K+G + EA ELF  +    C  +   Y+ LI+G  K+G +  A
Sbjct: 890  DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             ELF  + R  +  D+ +Y  ++  LC  G++D A   F  ++  G+  D +A+N ++ G
Sbjct: 950  CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009

Query: 385  CIRNNETSKVVELLHRMDER 404
              R++   + + L   M  R
Sbjct: 1010 LGRSHRIEEALTLYDEMQSR 1029



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 180/357 (50%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            +I  LC+    +VA ++F   I    E GV  KP    Y  +I+G       + A  L  
Sbjct: 760  IIKVLCKHKQALVAQSVF---IRFTKELGV--KPTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +MK+    PDV TYN ++     +   NE   L+ +M+    +PN +T ++I+  L K+ 
Sbjct: 815  EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +++A  L   ++     P    Y  L+DG   +GR+  AKELF  M   GC+ N   Y+
Sbjct: 875  SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K  ++  A  L+  M+ +GI+P + +Y +L   L E  +V+ A   F+++++ 
Sbjct: 935  ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D+ AY   IDGL ++  I EAL L+  ++      D+ +Y+ LI  L  +G ++ A
Sbjct: 995  GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQA 1054

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             +L+  L    L  +V TYN +I      G  D A+ ++  M   G +P+   F  L
Sbjct: 1055 GKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 202/432 (46%), Gaps = 34/432 (7%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF--------- 52
            +A  LF ++K     P+ +T  TL+ G+ + G    A  + E+ ++  G +         
Sbjct: 667  DAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDL 725

Query: 53   ----------------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDK 89
                                  G VCK D  +   II  LCK      A+ + ++  K+ 
Sbjct: 726  MGGILTQAGTEKTILFGDRLVCGRVCK-DGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL 784

Query: 90   NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
             + P + +YN +I GF   ++   A  LF EM + G  P+V T+++++D   K+GK+ E 
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 150  SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +L E MI    +PN   +N ++     +  +++A +LF  + S        +Y  L++G
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 210  YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
              K+  +E A  L+ EM+  G +P    YN L  G  +   V  A +LF  M R G+  D
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 270  TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              +Y + +  LC+ G + +AL  F  L+     LD  +Y+ +IDGL +S R++ A  L+ 
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 330  SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
             +    +  D+ TYN +I  L   G +++A  L+ +++  G+ P+   +N L+ G   + 
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSG 1084

Query: 390  ETSKVVELLHRM 401
             +     +  RM
Sbjct: 1085 NSDSAYAVYKRM 1096



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 175/345 (50%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A  Y  +I  L + G   +A E+  +M  + + P + T+++++       D+   K L 
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G++PN+ T+++ +  L + G+++EA ++++ M   G  P+   Y  L+D  C  
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+++ A ELFV M++   K +  +Y  +++ +    ++      +SEM + G  P V+T+
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L   L +   ++ AF L D M++ GV  +   Y T I GL +   + +AL+LF  +  
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L       +Y   ID   KSGR   A E F  +    +  ++V  N  +++L   G++ +
Sbjct: 433 LGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLRE 492

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  +F  +++ G+APD V +N +M    +  +  + +ELL  M E
Sbjct: 493 AKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 9/349 (2%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G  +V  NL +  I          K D   Y  I  GL   G + +      +M++  
Sbjct: 139 RVGDMVVVFNLMQNQI---------IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
            + +  +YN +I     +    EA  ++  M+ +G++P++ TFS +M    K    E   
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            LLE M  +G++PN + Y   +      GR++ A  +   ME  GC  +V +Y++LI+  
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   +++ A+ L+ +M +   KP  VTY T+     +   + R  + + EM+  G A D 
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +   ++ LCK G I EA  L   +R      ++ +Y+ LI GL +  RL  A +LF++
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +    ++    TY + I      G+ DKA + F  M+ +G+AP+ VA N
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACN 478



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 143/272 (52%), Gaps = 6/272 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   L+ ++    C+PN IT++ +I  L ++     AL+LF ++++G+        P   
Sbjct: 843  ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD------FSPTPC 896

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++DGL K G +++AKEL  +M D    P+   YN +I GF    D N A  LF  M
Sbjct: 897  TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G++P++ +++ ++  LC+ G++++A    E + Q G+  ++  YN ++DG   + R+
Sbjct: 957  VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRI 1016

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A  L+  M+S G   ++F+Y+ LI        +E A  LY E+   G++P V TYN L
Sbjct: 1017 EEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNAL 1076

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              G       + A+ ++  M   G + +T  +
Sbjct: 1077 IRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 136/286 (47%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M +Q ++ ++ T+ +I   L   G + +       M + G   NA+ YN L+    
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +G    A E++  M   G K ++ ++S L+    K ++ E   SL  EM S G+KP + 
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY      L    +++ A ++   M+  G   D   Y   ID LC  G + +A+ELF  +
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +    + D  +Y  ++D     G L    E +  +       DV+T+ I+++ALC  G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           D+A  L   M  +GV P+   +NTL+ G +R N     ++L + M+
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNME 431



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF ++  +GC PN   Y+ LING  +TG    A  LF+ M+          +PD  
Sbjct: 913  EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG------IRPDLK 966

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT+++  LC+ G VD A     ++K   +  D + YN +I G   ++   EA  L+ EM
Sbjct: 967  SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G+ P++ T++ ++  L   G +E+A +L E +  IG+ PN F YN L+ G+ ++G  
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNS 1086

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
            + A  ++  M   GC  N  +++ L N
Sbjct: 1087 DSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 219/429 (51%), Gaps = 37/429 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF--GVVCKPDAVIYTTIIDGLC 71
           G   N ++Y  LINGLC  G    A+NL   +     +   G   K + V+Y+ +ID LC
Sbjct: 137 GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLC 196

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + GFVD+  E   +M    + P+  TY S+IRG C      E   L  EM+ +G+  +V 
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY 256

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            F+V++D LCKNG + EA ++ + M+  G  PN      LM G+CL G V+ A+ELF ++
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT----------- 240
              G K +V++Y++ I+GYCK   +  A+ ++ EM  +G+ P +VTYN+           
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 241 ------------------------LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                                   L  GL +  ++++A  LF+++   G+  D W+Y   
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I G C +  + EA+ L R + +      I +YSCLIDGLC+SGR+  AW L + +     
Sbjct: 437 IHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGP 496

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + D +TY+I++ AL     +D+A  LF  M  +G+ PD + +  ++ G  ++    + + 
Sbjct: 497 LPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAIN 556

Query: 397 LLHRMDERN 405
           L   M  +N
Sbjct: 557 LFREMHMKN 565



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 196/354 (55%), Gaps = 6/354 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   L  ++   G + +V  ++ LI+GLC+ G  + A  +F+EM+N   E      P+ 
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE------PNI 290

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V  T ++ G C +G VD A+EL   + +     DV TYN  I G+C      +A R+F E
Sbjct: 291 VTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDE 350

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV PN+VT++ ++D LCK G++  A ++++ M + G+ P+      L+DG C + R
Sbjct: 351 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 410

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  LF  +   G   +V+SY+ILI+G C ++ +  A++L  +M  K + P +VTY+ 
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 470

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    ++  A++L +EM   G   DT  Y   +D L K  ++ EA+ LF  +    
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            E D+  Y+ +IDG CKS R+  A  LF  +    L+ D+VTY I+ +A+   G
Sbjct: 531 LEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 201/391 (51%), Gaps = 6/391 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E    + ++   G  PN  TY +LI GLC  G  +    L +EMI    +  V       
Sbjct: 203 EGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY------ 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++T +IDGLCK G + +A+E+  +M ++   P++VT  +++ G+C   + + A+ LF  +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G + +V T++V +   CK G++ +A ++ + M + GV PN   YN+L+D  C  G V
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+  +M   G   ++ +  IL++G CK+K ++ A+ L+++++  G+ P V +Y  L
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     ++  A  L  +M    +      Y   IDGLC++G I  A  L   + +   
Sbjct: 437 IHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGP 496

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS L+D L K   L  A  LF+ + +  L  DV+ Y IMI   C   ++D+A +
Sbjct: 497 LPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAIN 556

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           LF +M  K + PD V +  L     ++   S
Sbjct: 557 LFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 184/357 (51%), Gaps = 9/357 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F ++   G EPN++T + L+ G C  G+  +A  LF+ +    GE+G   K D 
Sbjct: 272 VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI----GEWGF--KRDV 325

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y   I G CK G V  A  +  +M  + + P++VTYNS+I   C A + + A  +   
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++VT  +++D LCK+ ++++A  L   +++ G+ P+ + Y  L+ G C + R
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  L   M       ++ +YS LI+G C++  I  A  L +EM  KG  P  +TY+ 
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L++   ++ A  LF++M + G+  D   Y   IDG CK+  I EA+ LFR + +  
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              DI +Y+ L + + KSG     W+  + +        V+ Y   + ALC    +D
Sbjct: 566 LVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLD 619



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 43/355 (12%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D V  N+V++G C      +A     E+++ G   N V++ ++++ LC+NG++ EA  LL
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 154 EL-------------------------------------------MIQIGVRPNAFVYNT 170
            +                                           M+  GV PN F Y +
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G C  G+      L   M   G   +V+ +++LI+G CKN  +  A  ++ EM+++G
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +P +VT   L  G      V+ A +LFD +   G   D W Y  FI G CK G + +A+
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            +F  +       +I +Y+ LID LCK+G +  AWE+  ++ R  L  D+VT  I++  L
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           C   ++D+A  LF  +   G+ PD  ++  L+ GC  +    + + LL  M  +N
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 11/385 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++      PNV+TY+ LI+GLC+ G    A+ L  +M          C P AV
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK     +A +LL +M      PD+ TY ++I GFC +  S++A R+F ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           + +G +P+VVT+S ++D LCK G+++EA  L   MI+ G   PN   YN+L+ GFC  G+
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M   G   +V +Y+ L+NG+CK   ++ A  L ++M  KG+ P VVT+ +
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL   +++  A  +  EM+R   +   + Y T +DG C+   + EA +    L  + 
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ S++ +I GLCK  R   A EL     R     DVV Y  +I  LC + K+D+A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 361 DLFLDM-EAKGVAPDCVAFNTLMLG 384
            ++  M E  G  P+ + ++TL+ G
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLVTG 439



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 221/405 (54%), Gaps = 11/405 (2%)

Query: 1   MEAAALFT-KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +E A +F  K+ + G  P+V TY+ +I+ LC       A    EEM N N        P+
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN------LTPN 80

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V YT +IDGLCK G VD+A  LL +M+ K + P  VTYNS+I G C A  ++EA  L  
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G  P++ T++ ++   CK+ K ++A ++ E ++  G RP+   Y+ L+DG C  G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 180 RVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           R+  A +LF  M +S  C  N  +Y+ LI+G+C+  +++ A++L   M   G  P VVTY
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  G  ++ +++ A+ L ++M R G+  D   + + +DGLC+   + +A+ +   +R 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C   + +Y+ ++DG C++ +L+ A +    L       +VV++NIMI  LC   +  +
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A +L  +   +   PD V + T++ G  R  +  +   +  +M E
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 199/349 (57%), Gaps = 3/349 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C  D V YT++I GLCK   +++A   L +M  K  +PDV TY +VI   C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +   EM ++ + PNVVT++V++D LCK G+++EA  LL  M +  V P A  YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   R + A +L   M   GC  ++F+Y+ LI G+CK+K+ + AL ++ +++++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFR 294
           VTY+ L  GL +  +++ A  LF  M + G    +T  Y + I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+ +Y+ L++G CK  RL  A++L + + R  L  DVVT+  ++  LC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE-LLHRMD 402
           ++  A  +  +M  K  +P    +NT++ G  R N+  +  + +L  MD
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 177/331 (53%), Gaps = 12/331 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L A G  P+V+TYS LI+GLC+ G    A++LF  MI         C P+ V
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPNTV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G C+ G +D+A  LL +M +   +PDVVTY +++ GFC     ++A  L  +M
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ +MD LC+  ++ +A  +L  M +    P  + YNT++DG+C   ++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++    +E M C  NV S++I+I G CK      A+ L  E   +   P VV Y T+
Sbjct: 343 EEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             GL    +V+ A +++ +M +  G   ++  Y T + GLC  G +  A           
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----G 456

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           C  +I +Y+ LID   K+ R + A EL   +
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 159/315 (50%), Gaps = 2/315 (0%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           + D VTY S+I+G C      +A     +M+ +G  P+V T++ ++  LC   ++ EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            LE M    + PN   Y  L+DG C  GRV+ A  L   M    C     +Y+ LI+G C
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLC 126

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +    A  L  EM+  G  P + TY TL  G  +  + + A ++F+++   G   D  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 272 AYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            Y   IDGLCK G + EA++LF R ++   C  +  +Y+ LI G C+ G++  A  L   
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +       DVVTY  +++  C   ++D A+DL   M  KG+ PD V F +LM G  R N 
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 391 TSKVVELLHRMDERN 405
            S  V +L  M  ++
Sbjct: 307 LSDAVHILGEMRRKS 321



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 150/295 (50%), Gaps = 37/295 (12%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----- 55
           EA  LF ++ K+  C PN +TY++LI+G CR G    A+NL E M        VV     
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 56  ----CK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
               CK                    PD V +T+++DGLC+E  +  A  +L +M+ K+ 
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P V TYN+++ G+C AN   EA++  +E MD    PNVV+F++++  LCK  +  EA +
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGY 210
           L+E   +    P+  +Y T++DG C   +V+ A  ++  M E  GC  N  +YS L+ G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           C      G L      + KG  P + TYN L     + ++ E A +L D+M + G
Sbjct: 441 CN----AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/372 (35%), Positives = 202/372 (54%), Gaps = 7/372 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P++ TY++LI+GLC+ G    A+ +  +MI  +      C P+ V Y TII  LCKE
Sbjct: 331 GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD------CSPNTVTYNTIISTLCKE 384

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             V++A +L L +  K I PDV TYNS+I+G C + +   A  L+ EM  +G  P+  T+
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTY 444

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++D LC  GK++EA  LL+ M   G   N   YNTL+DGFC   R+  A+E+F  ME 
Sbjct: 445 NMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +Y+ LI+G CK++ +E A  L  +M+ +G++P   TYN+L     +   +++
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKK 564

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M   G   D   Y T I GLCK G +  A +L RT+++    L   +Y+ +I 
Sbjct: 565 AADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQ 624

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +  R K A  LF  +       D VTY I+   LC   G + +A D  ++M  +G  
Sbjct: 625 ALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYV 684

Query: 373 PDCVAFNTLMLG 384
           P+  +F  L  G
Sbjct: 685 PEFSSFYMLAEG 696



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 212/391 (54%), Gaps = 5/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC    +T + L+NG C+ G    AL   EEM    G F     PD   +  +++GL K 
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF-----PDKYTFNMLVNGLSKT 314

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V  A E++  M  +  +PD+ TYNS+I G C   + +EA ++  +M+++   PN VT+
Sbjct: 315 GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY 374

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+  LCK  ++EEA++L  ++   G+ P+   YN+L+ G CL+     A EL+  M++
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  + F+Y++LI+  C   +++ AL+L  EM   G    V+TYNTL  G  +  ++  
Sbjct: 435 KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAE 494

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A ++FD+M+  GV+ ++  Y T IDGLCK+  + EA +L   + +     D  +Y+ L+ 
Sbjct: 495 AEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLT 554

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+G +K A ++  ++       D+VTY  +I  LC  G+++ A  L   ++ KG+  
Sbjct: 555 YFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINL 614

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              A+N ++    R   + + V L   M E+
Sbjct: 615 TPHAYNPVIQALFRRKRSKEAVRLFREMIEK 645



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 204/389 (52%), Gaps = 7/389 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V T++ LI  LCR      A+ L EEM     +FG++  PD   +TTI+ G  +E
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEM----EDFGLL--PDEKTFTTIMQGFIEE 243

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-MDQGVQPNVVT 132
           G +D A  +  QM +       VT N ++ GFC      EA R   EM + +G  P+  T
Sbjct: 244 GNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYT 303

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+++++ L K G ++ A +++++M++ G  P+ + YN+L+ G C  G V+ A ++   M 
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
              C  N  +Y+ +I+  CK  ++E A  L   +  KGI P V TYN+L  GL       
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L+ EM+  G   D + Y   ID LC  G + EAL L + + +  C  ++ +Y+ LI
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK+ R+  A E+F  +    +  + VTYN +I  LC   ++++A  L   M  +G+ 
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD   +N+L+    +  +  K  +++  M
Sbjct: 544 PDKFTYNSLLTYFCKAGDIKKAADIVQTM 572



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 156/283 (55%), Gaps = 6/283 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   L   G  P+V TY++LI GLC + +  VA+ L++EM          C PD  
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG------CHPDEF 442

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC  G + +A  LL +M+      +V+TYN++I GFC      EA+ +F +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV  N VT++ ++D LCK+ ++EEASQL++ MI  G+RP+ F YN+L+  FC  G +
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDI 562

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M S GC+ ++ +Y  LI G CK   +E A  L   +  KGI  T   YN +
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
              LF   + + A +LF EM     A D   Y+    GLC+ G
Sbjct: 623 IQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 179/355 (50%), Gaps = 7/355 (1%)

Query: 51  EFGVVCKPD--AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
           EFGVV        +   ++DG  K   V+ A      M  + I PDV T+N +I+  C A
Sbjct: 153 EFGVVANTHFYNFLLNVLVDG-NKLKLVEIAHS---NMVSRGIRPDVSTFNILIKALCRA 208

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           +    A  L  EM D G+ P+  TF+ IM    + G ++ A ++ E M++ G        
Sbjct: 209 HQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTV 268

Query: 169 NTLMDGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           N L++GFC  GR+  A      M    G   + +++++L+NG  K   ++ AL +   ML
Sbjct: 269 NVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMML 328

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +G  P + TYN+L  GL ++ +V+ A K+ ++M     + +T  Y T I  LCK   + 
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           EA +L   L       D+ +Y+ LI GLC S    +A EL+  +       D  TYN++I
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLI 448

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +LC  GK+ +A +L  +ME  G A + + +NTL+ G  +N   ++  E+  +M+
Sbjct: 449 DSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME 503



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 148/280 (52%), Gaps = 9/280 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  L+ ++K  GC P+  TY+ LI+ LC  G    ALNL +EM ++G       C  + +
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG-------CARNVI 477

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK   + +A+E+  QM+ + ++ + VTYN++I G C +    EA +L  +M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+  T++ ++   CK G +++A+ +++ M   G  P+   Y TL+ G C  GRV
Sbjct: 538 IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L  +++  G      +Y+ +I    + K  + A+ L+ EM+ K   P  VTY  +
Sbjct: 598 EAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657

Query: 242 FIGLFE-IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           F GL +    +  A     EM   G   +  ++    +GL
Sbjct: 658 FRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 9/290 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  GC  NVITY+TLI+G C+      A  +F++M     E   V + ++V
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM-----ELQGVSR-NSV 512

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGLCK   V++A +L+ QM  + + PD  TYNS++  FC A D  +A  +   M
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT+  ++  LCK G++E A++LL  +   G+      YN ++       R 
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRS 632

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A  LF  M       +  +Y I+  G C+    I  A+    EML +G  P   ++  
Sbjct: 633 KEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYM 692

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           L  GLF +  V    KL D +      +D     T I G  K     +AL
Sbjct: 693 LAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLKISKYQDAL 740



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 5/300 (1%)

Query: 110 DSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFV 167
           DS+    LF     Q   +P+   F  ++ +L K G+ +    +L E+ I + V  N  +
Sbjct: 68  DSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSL 127

Query: 168 YNTLMDGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
               ++ +   G  N   +   +ME   G   N   Y+ L+N      +++     +S M
Sbjct: 128 L-VFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNM 186

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           +S+GI+P V T+N L   L   HQ+  A  L +EM+  G+  D   + T + G  + G +
Sbjct: 187 VSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNL 246

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNI 345
             A+ +   +    C +   + + L++G CK GR++ A      +  R     D  T+N+
Sbjct: 247 DGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNM 306

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +++ L   G +  A ++   M  +G  PD   +N+L+ G  +  E  + V++L++M ER+
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 211/384 (54%), Gaps = 22/384 (5%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F  E   IT++ L+ GLC    T  A+++    +    E G  C P+   Y  +++GL
Sbjct: 116 KGFRVE--AITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGL 168

Query: 71  CKEGFVDKAKELLLQMKDK---NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           C E    +A ELL  M D       PDVV+Y +VI GF    DS++A   + EM+D+G+ 
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228

Query: 128 PNVVTFSVIMDELCKN------------GKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           P+VVT+S I+  LCK             G++ E+ +L +LM++IGV+P+   Y+TL+DG+
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 288

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           CL G+++ A +L   M S+G K N  +YS LINGYCK   +E AL L+ EM S G+ P +
Sbjct: 289 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 348

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           +TYN +  GLF+  +   A +L+  +   G   +   Y   + GLCKN    +AL++F+ 
Sbjct: 349 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 408

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           L ++  +L+ R+++ +ID L K GR   A +LF +     L+ +  TY +M   +   G 
Sbjct: 409 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 468

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFN 379
           +++   LFL ME  G   D    N
Sbjct: 469 LEELDQLFLSMEDNGCTVDSGMLN 492



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  +   G +P++ITYSTLI+G C  G    A+ L   M++      V  KP+ 
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 313

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   ++ A  L  +M+   ++PD++TYN +++G      +  AK L++ 
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + T+++I+  LCKN   ++A Q+ + +  + ++  A  +N ++D     GR
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 433

Query: 181 VNRAKELFVSMESMGCKHNVFSYSIL 206
            + AK+LFV+  S G   N ++Y ++
Sbjct: 434 NDEAKDLFVAFSSNGLVPNYWTYRLM 459



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 55/345 (15%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG---VRPNAFVYN 169
           +A+ +F E++ +G   ++   +  + ++ ++      S+    M + G   V P+   Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------- 222
            L+   C  GR++       ++   G +    +++ L+ G C +K    A+ +       
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 223 ---------YSEMLS-----------------------KGIKPTVVTYNTLFIGLFEIHQ 250
                    Y+ +L+                        G  P VV+Y T+  G F+   
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN------------GYIVEALELFRTLRI 298
            ++A+  + EM   G+  D   Y + I  LCK             G ++E+ +LF  +  
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVR 271

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI +YS LIDG C +G++  A +L   +    L  + VTY+ +I+  C   +M+ 
Sbjct: 272 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 331

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  LF +ME+ GV+PD + +N ++ G  +   T+   EL  R+ E
Sbjct: 332 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 376



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 6/195 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L + + + G +PN +TYSTLING C+      AL LF+EM +          PD +
Sbjct: 296 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG------VSPDII 349

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+ GL +      AKEL +++ +     ++ TYN ++ G C    +++A ++F  +
Sbjct: 350 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 409

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++    TF++++D L K G+ +EA  L       G+ PN + Y  + +     G +
Sbjct: 410 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 469

Query: 182 NRAKELFVSMESMGC 196
               +LF+SME  GC
Sbjct: 470 EELDQLFLSMEDNGC 484



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 8/195 (4%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAY 273
           E A  ++ E+L +G   ++   N     +   H    A   ++ M R G   V  D   Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL-FHSLP 332
              I   C+ G +         +      ++  +++ L+ GLC   R   A ++    + 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLF---LDMEAKGVAPDCVAFNTLMLGCIRNN 389
               I +V +YN +++ LC + +  +A +L     D    G  PD V++ T++ G  +  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 390 ETSKVVELLHRMDER 404
           ++ K     H M +R
Sbjct: 211 DSDKAYSTYHEMLDR 225



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++   G +  + TY+ +++GLC+   T  AL +F+ +   +       K +A  
Sbjct: 367 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD------LKLEART 420

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +ID L K G  D+AK+L +      + P+  TY  +           E  +LF+ M 
Sbjct: 421 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 480

Query: 123 DQGVQPNVVTFSVIMDELCK 142
           D G   +    + I+ EL +
Sbjct: 481 DNGCTVDSGMLNFIVRELLQ 500


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 222/405 (54%), Gaps = 11/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAV 61
           A  L  ++K     P V+TYS +INGLCR G+      +  EM+ NG        KP+AV
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAV 461

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YTT++    KEG V++++ +L +M+++ I PDV  YNS+I GFC A    EA+   +EM
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++PN  T+   +D   K G+ME A +    M+  GV PN  +Y  L++G C  G V
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  + S     +V +YS+LI+G  +N ++  A  ++SE+  KG+ P   TYN+L
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V++A +L +EM   G+  D   Y   IDGLCK G I  A  LF  +     
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +Y+ ++DG CKS     A++L    L RGV   D   YN++++  C + K +KA 
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCCKEEKFEKAL 760

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DLF +M  KG A   V+FNTL+ G  ++ +  +   LL  M E+ 
Sbjct: 761 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 216/405 (53%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA- 60
           EA  +  ++   G +P  ITY+ LI+G  R G    A  + +EM        V C  +A 
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEAN 354

Query: 61  -VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            +I+ T+++G+CK G ++KA E++ +M +K + PD  TY+ +I G C   +   A  L  
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  + + P V+T+SVI++ LC+ G ++  + +L  M+  G++PNA VY TLM      G
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  ++ +   M   G   +VF Y+ LI G+CK K +E A +   EML + ++P   TY 
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 534

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
               G  +  ++E A + F+EM   GV  +   Y   I+G CK G + EA  +FR +   
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D+++YS LI GL ++G++  A+ +F  L    L+ +  TYN +I   C  G +DKA
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L  +M  KG+ PD V +N L+ G  +  E  +   L   ++ R
Sbjct: 655 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 699



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 229/437 (52%), Gaps = 45/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   GC PN++TY+ +I GLCR      A+ L   M++     G+V  PD  
Sbjct: 233 DAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK----GLV--PDLY 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C E    +AK +LL+M D  + P+ +TYN++I GF    D  +A R+  EM
Sbjct: 287 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++ N++ ++ +++ +CK GKME+A ++++ M++ GV P++  Y+ L++G C    +
Sbjct: 347 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA EL   M+       V +YS++ING C+   ++G  ++  EM+  G+KP  V Y TL
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEALELFR 294
                +  +VE +  + + M+  G+  D + Y + I G CK         Y++E LE  R
Sbjct: 467 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE--R 524

Query: 295 TLR----------------------------ILKCEL--DIRSYSCLIDGLCKSGRLKIA 324
            LR                            +L C +  ++  Y+ LI+G CK G +  A
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           + +F  +    ++ DV TY+++IH L  +GKM +A  +F +++ KG+ P+   +N+L+ G
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644

Query: 385 CIRNNETSKVVELLHRM 401
             +     K  +LL  M
Sbjct: 645 SCKQGNVDKASQLLEEM 661



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 213/428 (49%), Gaps = 41/428 (9%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G E N+I ++TL+NG+C+ G    AL + +EM+    E GV  +PD+  Y+ +I+G C
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHC 401

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +   + +A ELL +MK + + P V+TY+ +I G C   +      +  EM+  G++PN V
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 461

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            ++ +M    K G++EE+  +LE M + G+ P+ F YN+L+ GFC   R+  A+   + M
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV---------------- 235
                + N  +Y   I+GY K  E+E A   ++EMLS G+ P V                
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581

Query: 236 -------------------VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                               TY+ L  GL    ++  AF +F E+Q  G+  + + Y + 
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I G CK G + +A +L   + I     DI +Y+ LIDGLCK+G ++ A  LF  +    L
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             + VTY  M+   C       A  L  +M  +GV PD   +N ++  C +  +  K ++
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 397 LLHRMDER 404
           L   M E+
Sbjct: 762 LFQEMLEK 769



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 191/362 (52%), Gaps = 7/362 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN  TY   I+G  + G   +A   F EM++     GV+  P+  IYT +I+G CKEG V
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNV 581

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +   +  + +  DV TY+ +I G       +EA  +F E+ ++G+ PN  T++ +
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   CK G +++ASQLLE M   G+ P+   YN L+DG C  G + RAK LF  +E  G 
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  +Y+ +++GYCK+K    A  L  EML +G+ P    YN +     +  + E+A  
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF EM   G A+ T ++ T I+G CK+G + EA  L   +   +   +  +Y+ LID  C
Sbjct: 762 LFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G +  A  L+  +    ++    TY  ++H     G M +   LF +M AKG+ PD +
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 377 AF 378
            +
Sbjct: 881 TY 882



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 204/388 (52%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN + +  L++   + G  + A+N+F  +   N EF    +P  +   +++  L K   V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEF----RPSLLSCNSLLGDLLKGNKV 196

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +   ++   M    + PDV TY ++I   C   +  +AKR+ +EM ++G  PN+VT++VI
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC+   ++EA +L   M+  G+ P+ + Y+ L++GFC+  R   AK + + M  +G 
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K    +Y+ LI+G+ +  +IE A  +  EM++ GI+  ++ +NTL  G+ +  ++E+A +
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM   GV  D+  Y   I+G C+   +  A EL   ++  K    + +YS +I+GLC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G L+    +   +    L  + V Y  ++ A   +G+++++  +   M  +G+ PD  
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N+L++G  +     +    L  M ER
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLER 524



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 201/434 (46%), Gaps = 40/434 (9%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ++F  + +     +V TYS LI+GL R G    A  +F E+     E G++  P+A 
Sbjct: 583  EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL----QEKGLL--PNAF 636

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y ++I G CK+G VDKA +LL +M  K INPD+VTYN +I G C A +   AK LF ++
Sbjct: 637  TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN------------ 169
              +G+ PN VT++ ++D  CK+     A QLLE M+  GV P+AF+YN            
Sbjct: 697  EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 170  ----------------------TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                                  TL++G+C +G++  A  L   M       N  +Y+ LI
Sbjct: 757  EKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 816

Query: 208  NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            +  CK   +  A  L+ EM  + + PT  TY +L  G   I  +     LF+EM   G+ 
Sbjct: 817  DHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIE 876

Query: 268  ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             D   Y   ID  C+ G ++EA +L   + +    + + +Y  LI  LCK        +L
Sbjct: 877  PDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKL 936

Query: 328  FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
             + +        + T +++       G MD+A ++   M   G   +  +   L+ G   
Sbjct: 937  LNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQN 996

Query: 388  NNETSKVVELLHRM 401
               +     LL +M
Sbjct: 997  GANSEDSDNLLKQM 1010



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 149/298 (50%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N +P+ V ++ ++  +       EA  +F+   +   +P++++ + ++ +L K  K+E  
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++ + M    V P+ + Y  ++   C  G V  AK + + M   GC  N+ +Y+++I G
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C+ + ++ A+ L   M+ KG+ P + TY+ L  G     +   A  +  EM   G+  +
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   IDG  + G I +A  +   +     E ++  ++ L++G+CK+G+++ A E+  
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            +    +  D  TY+++I   C    M +A +L  +M+ + +AP  + ++ ++ G  R
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 437


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 233/433 (53%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG----NGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G  +    L + M+ NG    +  F + +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+ V Y  +I  LCK G VD A     QM D+ + 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+++ Y S+I   C  +  ++A+ L +EM+D+G+  N + F+ I+   CK G++ E+ +L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S+G K +  +Y+ LINGYC+
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + + G   +   
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + GLCKN    EAL +F+ L +   +L+ R+++ +I  L K GR   A +LF +L 
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 678

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY++M   L   G +++  DLFL ME  G   +    N+++   ++  + +
Sbjct: 679 ANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDIT 738

Query: 393 KVVELLHRMDERN 405
           +    L  +DE++
Sbjct: 739 RAGTYLSMIDEKH 751



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 212/422 (50%), Gaps = 41/422 (9%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  G  P+V++Y+T+ING  + G +  A + + EM++          PD V Y++II  L
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR------ISPDVVTYSSIIAAL 241

Query: 71  CKEGFVDKAKELLL-----------------------------------QMKDKNINPDV 95
           CK   +DKA E+L                                    +M+   + PDV
Sbjct: 242 CKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDV 301

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VTYNS++   C    S EA+++F  M  +G++P++ T+  ++      G + E   LL+L
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G+ P+  V+N L+  +    +V+ A  +F  M   G   NV +Y  +I   CK+  
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+  + +M+ +G+ P ++ Y +L   L    + ++A +L  EM   G+  +T  + +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I   CK G ++E+ +LF  +  +  + ++ +YS LIDG C +G++  A +L  S+    
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D VTYN +I+  C   +MD A  LF +M + GV+P+ + +N ++ G      T+   
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 396 EL 397
           EL
Sbjct: 602 EL 603



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 202/431 (46%), Gaps = 38/431 (8%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++    C P+V + + L+ GLC    +  AL L   M +  G       PD V YTT
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G  KEG  DKA     +M D+ I+PDVVTY+S+I   C     ++A  +   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN +T++ I+   C + + +EA   L+ M   GV P+   YN+LMD  C  GR   A+
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F SM   G + ++ +Y  L+ GY     +    +L   M+  GI P    +N L    
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V+ A  +F +M++HG+  +   Y   I  LCK+G + +A+  F  +       +I
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 306 RSYSCLIDGL-----------------------------------CKSGRLKIAWELFHS 330
             Y+ LI  L                                   CK GR+  + +LF  
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R  +  +V+TY+ +I   C  GKMD+A  L   M + G+ PDCV +NTL+ G  R + 
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 391 TSKVVELLHRM 401
               + L   M
Sbjct: 562 MDDALALFKEM 572



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 199/394 (50%), Gaps = 11/394 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G     IT++ L+ GLC    T  A+++    +       + C PD    T ++ GLC E
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE-----LSCMPDVFSCTILLKGLCDE 171

Query: 74  GFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
               +A ELL  M D       PDVV+Y +VI GF    DS++A   + EM+D+ + P+V
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDV 231

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT+S I+  LCK   M++A ++L  M++ GV PN   YN+++ G+C + +   A      
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M S G + +V +Y+ L++  CKN     A  ++  M  +G++P + TY TL  G      
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +     L D M R+G+  D   +   I    K   + EA+ +F  +R      ++ +Y  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +I  LCKSG +  A   F  +    L  +++ Y  +IH+LC   K DKA +L L+M  +G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 371 VAPDCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
           +  + + FN+++    +     E+ K+ +L+ R+
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 206/401 (51%), Gaps = 11/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TY++L++ LC+ G +  A  +F+ M     E      PD  
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE------PDIA 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+PD   +N +I  +      +EA  +F +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVVT+  ++  LCK+G +++A    E MI  G+ PN  VY +L+   C+  + 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+EL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP V+TY+TL
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A KL   M   G+  D   Y T I+G C+   + +AL LF+ +     
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ ++ GL  + R   A EL+  + +     ++ TYNI++H LC +   D+A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELL 398
           +F ++    +  +   FN +M+G +    RN+E   +   L
Sbjct: 638 MFQNLCLTDLQLETRTFN-IMIGALLKVGRNDEAKDLFAAL 677



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 4/329 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I   C+ G +D     L  +  K    + +T+  +++G C    +++A  +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMD 173
            +  M +    P+V + ++++  LC   + +EA +LL +M      G  P+   Y T+++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF   G  ++A   +  M       +V +YS +I   CK + ++ A+ + + M+  G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             +TYN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA ++F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            ++     E DI +Y  L+ G    G L     L   + R  +  D   +NI+I A    
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            K+D+A  +F  M   G+ P+ V +  ++
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 33/280 (11%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P V T+ +++   C+ G+++     L  +++ G R  A  +  L+ G C   R + A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++ +  M  + C  +VFS +IL+ G C     + AL L                      
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL---------------------- 180

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                       +  + +  G A D  +Y T I+G  K G   +A   +  +   +   D
Sbjct: 181 ----------LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPD 230

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS +I  LCK   +  A E+  ++ +  ++ + +TYN ++H  C+  +  +A     
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M + GV PD V +N+LM    +N  +++  ++   M +R
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 224/403 (55%), Gaps = 24/403 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
           A ++  K+   G +P+ +T +TL+ GLC       AL+  ++               +IN
Sbjct: 29  AFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLIN 88

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
           G  + G    PD  +Y+ II+ LCK+  V  A +L  +M  K I PDVVTYN++I GFC 
Sbjct: 89  GLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCI 148

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
                +A RLF EM  + + PNV +F++++D LCK G ++    +L +MI+  V+P+   
Sbjct: 149 VGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVT 208

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            ++L+DG+ L  + N+A+ +F +M   G   ++ SY+I+ING  K K ++ A+ L+ EM 
Sbjct: 209 CSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQ 268

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            K + P  +TY+TL  GL ++ ++   + L DEM+  G +A+   Y + ++ LCK+G+  
Sbjct: 269 FKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFD 328

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            A+ +F  ++    E ++ +Y+ L+DGLCK+GRLK A E+FH L       DV  Y +MI
Sbjct: 329 TAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMI 388

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + LC +   D         EA G  P+ V +  ++    +N++
Sbjct: 389 NGLCREALFD---------EAYGCTPNAVTYEIIIRALFKNDK 422



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 20/388 (5%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + ++I  S LIN          A ++  +++       +  +PD V  TT++ GLC  
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILK------IGYQPDTVTLTTLLKGLCIN 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             V KA      +  K    D V+Y ++I G C    S E K            P+   +
Sbjct: 59  NEVKKALHFHDDVIAKGFRLDNVSYGTLINGLC---KSGETK-----------APDQFMY 104

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+I++ LCK+  + +A  L   M+   + P+   YNTL+ GFC+ G++  A  LF  M  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                NV S++ILI+G CK  +++G  S+ + M+ + +KP VVT ++L  G F + +  +
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +F+ M ++GV  D  +Y   I+GL K   + EA+ LF+ ++      D  +YS LID
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K GR+   W+L   +      A+V+TY+ +++ LC  G  D A  +F  ++ KG  P
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEP 344

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V +N L+ G  +N       E+ H +
Sbjct: 345 NMVTYNILVDGLCKNGRLKDAQEIFHDL 372



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY+TLI G C  G    A+ LF EM   N        P+   +  +IDGLCKEG V
Sbjct: 134 PDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN------IVPNVCSFNILIDGLCKEGDV 187

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
              K +L  M  +++ PDVVT +S+I G+     +N+A+ +F  M   GV  ++ +++++
Sbjct: 188 KGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIM 247

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ L K   ++EA  L + M    + P+   Y+TL+DG    GR++   +L   M + G 
Sbjct: 248 INGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGR 307

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV +YS L+N  CK+   + A+ +++++  KG +P +VTYN L  GL +  +++ A +
Sbjct: 308 SANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQE 367

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F ++   G   D   Y   I+GLC+     EA           C  +  +Y  +I  L 
Sbjct: 368 IFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEIIIRALF 418

Query: 317 KSGRLKI 323
           K+ + K+
Sbjct: 419 KNDKNKL 425



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 14/316 (4%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M+ + I  D++  + +I  F +    N A  +  +++  G QP+ VT + ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A    + +I  G R +   Y TL++G C +G      +              F YS+
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ--------------FMYSM 106

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +IN  CK+K +  A  LY EM+ K I P VVTYNTL  G   + Q+E A +LF+EM+   
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +  ++   IDGLCK G +     +   +     + D+ + S LIDG     +   A 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            +F+++ +  +  D+ +YNIMI+ L     +D+A  LF +M+ K + PD + ++TL+ G 
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 386 IRNNETSKVVELLHRM 401
            +    S V +L+  M
Sbjct: 287 GKLGRISYVWDLIDEM 302



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 15/171 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++     P+ ITYSTLI+GL + G      +L +EM    G        + +
Sbjct: 259 EAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEM-RATGR-----SANVI 312

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++++ LCK G  D A  +  ++KDK   P++VTYN ++ G C      +A+ +F ++
Sbjct: 313 TYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDL 372

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           + +G + +V  ++V+++ LC+    +EA          G  PNA  Y  ++
Sbjct: 373 LIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIII 414



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 14/177 (7%)

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +GI+  ++  + L    + + Q+  AF +  ++ + G   DT    T + GLC N  + +
Sbjct: 4   RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL     +      LD  SY  LI+GLCKSG  K                D   Y+++I+
Sbjct: 64  ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAP--------------DQFMYSMIIN 109

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            LC D  +  A+DL+ +M  K + PD V +NTL+ G     +    + L + M  +N
Sbjct: 110 RLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 219/404 (54%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+V+TYS+LI GL + G T+ A  LF+EM    G      KPD++
Sbjct: 167 KAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR-RGR-----KPDSI 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++D L K G VD A ELL +MK++ + P VVTYN++I GF    D  EA  L  EM
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+VVT+S ++  L K  +++EA Q+L+ M + G  P+   YNTL++G    G +
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  LF  M+S GC  +V +YS LI    K   +E A  L+ EM S GI+P + TY ++
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSI 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  QV+ A +LF EM+  G++ D   Y  F++ L + G   EA ++F  ++    
Sbjct: 401 ITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y  L+ GL K+  +  A  L   L       D + ++  +  L + G +D+AH+
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L     +KG+ P   ++N L+    +    S+    L  + E+ 
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 214/404 (52%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  GC P+V TY+ LI+ L + G    A  LF EM     E G  C PD  
Sbjct: 97  EALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR----ERG--CVPDTF 150

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GL K G   KA ELL +M+     PDV+TY+S+I G     ++ +A +LF EM
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+ +TF+ +MD L K G++++A +LL+ M + GV+P    YN L+ GF   G +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M+  GCK +V +YS LI G  K  +++ A  +  +M  +G  P  +TYNTL
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +  A +LFD M+  G   D   Y T I  L K   +  A  LF  +  +  
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y  +I  L K+G++  A  LF  +    L  DV+TYN  +++L   G+  +A  
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +F DM+  G+ PD   ++ L+LG  +  E      LL  + E+ 
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 196/366 (53%), Gaps = 6/366 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+TY++L+N L + G    A  LFEE+            PD V Y+ +I+ L + G  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAK------WTPDVVSYSCLINSLGRAGKW 60

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A E++ +M+ K   P++ TYN+++     A   +EA RL  EM D G  P+V T++ +
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L K G++ EA  L   M + G  P+ F YN+L+ G    GR  +A EL   ME  GC
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G  K+ E   A  L+ EM  +G KP  +T+  L   L +  +V+ A +
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L DEM+  GV      Y   I G  K G +VEA  L   ++   C+ D+ +YSCLI GL 
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+ +L  A ++   + +     D +TYN +I+ L   G ++ A  LF  M++KG  PD V
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360

Query: 377 AFNTLM 382
            ++TL+
Sbjct: 361 TYSTLI 366



 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/381 (35%), Positives = 205/381 (53%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +LKA    P+V++YS LIN L R G    AL +  EM    G     CKP+  
Sbjct: 27  EAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM-QAKG-----CKPNLW 80

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D L K G  D+A  LL +M+D    PDV TYN +I     A   +EA  LF EM
Sbjct: 81  TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+  T++ ++  L K G+ ++A +LLE M + G  P+   Y++L+ G    G  
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGET 200

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +LF  M+  G K +  +++ L++   K   ++ AL L  EM  +G+KP VVTYN L
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +  A+ L DEM+R+G   D   Y   I GL K   + EA ++ + +    C
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI+GL K+G L  A  LF  +       DVVTY+ +I AL    +++ A  
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           LF +ME+ G+ PD   + +++
Sbjct: 381 LFEEMESVGIQPDLFTYCSII 401



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 205/405 (50%), Gaps = 6/405 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF ++K  G +P+ IT++ L++ L + G    AL L +EM     E GV  KP  
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM----KERGV--KPGV 254

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I G  K G + +A  LL +MK     PDVVTY+ +I G   A+  +EA ++  +
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+ +T++ +++ L K G + +A +L + M   G  P+   Y+TL+       R
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  LF  MES+G + ++F+Y  +I    K  +++ A  L+SEM  KG+ P V+TYN 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
               L    + + A K+F++M+  G+  D   Y   + GL K   + +A  L + L    
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D   +   ++ L   G +  A EL        L     +YN +I AL   G++ +A 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   D++ +G  PD V++++L+    +  +     ELL  M +R 
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 178/348 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+ V Y ++++ L K G  ++A+ L  ++K     PDVV+Y+ +I     A     A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +G +PN+ T++ ++D L K G+ +EA +LL  M   G  P+   YN L+     
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR++ A  LF  M   GC  + F+Y+ LI G  K    + A+ L  EM   G  P V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y++L  GL +  +  +AFKLF EM+R G   D+  +   +D L K G + +ALEL   ++
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  + +Y+ LI G  K G L  A+ L   + R     DVVTY+ +I  L    ++D
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A  +   ME +G  PD + +NTL+ G  +    +    L  RM  + 
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 175/312 (56%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P+VVTYNS++     A    EA+ LF E+      P+VV++S +++ L + GK E A +
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           ++  M   G +PN + YNTL+D     G+ + A  L   M   GC  +V +Y+ LI+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +  A +L++EM  +G  P   TYN+L  GL ++ + ++A +L +EM+RHG   D  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + I GL K+G  V+A +LF+ ++    + D  +++ L+D L K+GR+  A EL   +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +   VVTYN +I      G + +A++L  +M+  G  PD V ++ L+ G I+ ++ 
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 392 SKVVELLHRMDE 403
            +  ++L +M++
Sbjct: 306 DEACQVLKKMEK 317



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 6/350 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++K  GC+P+V+TYS LI GL +      A  + ++M          C PD 
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG------CPPDT 324

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+I+GL K G ++ A  L  +MK K  NPDVVTY+++I     A     A  LF E
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+QP++ T+  I+  L K G++++A +L   M   G+ P+   YN  ++     GR
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+++F  M+  G   +V +Y  L+ G  K KE++ A  L  E++ +G     + ++ 
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
               L     V+ A +L       G+     +Y   ID L K G + EA      L+   
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            + DI SYS LI  L ++G++  A+EL   + +  L     +Y+ ++  L
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 222/405 (54%), Gaps = 11/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAV 61
           A  L  ++K     P V+TYS +INGLCR G+      +  EM+ NG        KP+AV
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAV 452

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YTT++    KEG V++++ +L +M+++ I PDV  YNS+I GFC A    EA+   +EM
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++PN  T+   +D   K G+ME A +    M+  GV PN  +Y  L++G C  G V
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  + S     +V +YS+LI+G  +N ++  A  ++SE+  KG+ P   TYN+L
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V++A +L +EM   G+  D   Y   IDGLCK G I  A  LF  +     
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +Y+ ++DG CKS     A++L    L RGV   D   YN++++  C + K +KA 
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCCKEEKFEKAL 751

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DLF +M  KG A   V+FNTL+ G  ++ +  +   LL  M E+ 
Sbjct: 752 DLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 216/405 (53%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA- 60
           EA  +  ++   G +P  ITY+ LI+G  R G    A  + +EM        V C  +A 
Sbjct: 294 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEAN 345

Query: 61  -VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            +I+ T+++G+CK G ++KA E++ +M +K + PD  TY+ +I G C   +   A  L  
Sbjct: 346 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 405

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  + + P V+T+SVI++ LC+ G ++  + +L  M+  G++PNA VY TLM      G
Sbjct: 406 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  ++ +   M   G   +VF Y+ LI G+CK K +E A +   EML + ++P   TY 
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 525

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
               G  +  ++E A + F+EM   GV  +   Y   I+G CK G + EA  +FR +   
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D+++YS LI GL ++G++  A+ +F  L    L+ +  TYN +I   C  G +DKA
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L  +M  KG+ PD V +N L+ G  +  E  +   L   ++ R
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 690



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 213/428 (49%), Gaps = 41/428 (9%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G E N+I ++TL+NG+C+ G    AL + +EM+    E GV  +PD+  Y+ +I+G C
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHC 392

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +   + +A ELL +MK + + P V+TY+ +I G C   +      +  EM+  G++PN V
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            ++ +M    K G++EE+  +LE M + G+ P+ F YN+L+ GFC   R+  A+   + M
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV---------------- 235
                + N  +Y   I+GY K  E+E A   ++EMLS G+ P V                
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 236 -------------------VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                               TY+ L  GL    ++  AF +F E+Q  G+  + + Y + 
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I G CK G + +A +L   + I     DI +Y+ LIDGLCK+G ++ A  LF  +    L
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             + VTY  M+   C       A  L  +M  +GV PD   +N ++  C +  +  K ++
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 397 LLHRMDER 404
           L   M E+
Sbjct: 753 LFQEMLEK 760



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 191/362 (52%), Gaps = 7/362 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN  TY   I+G  + G   +A   F EM++     GV+  P+  IYT +I+G CKEG V
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNV 572

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  +   +  + +  DV TY+ +I G       +EA  +F E+ ++G+ PN  T++ +
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   CK G +++ASQLLE M   G+ P+   YN L+DG C  G + RAK LF  +E  G 
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  +Y+ +++GYCK+K    A  L  EML +G+ P    YN +     +  + E+A  
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF EM   G A+ T ++ T I+G CK+G + EA  L   +   +   +  +Y+ LID  C
Sbjct: 753 LFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G +  A  L+  +    ++    TY  ++H     G M +   LF +M AKG+ PD +
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 377 AF 378
            +
Sbjct: 872 TY 873



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 224/448 (50%), Gaps = 58/448 (12%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK-------- 57
           +F  + A    P+V TY+ +I+  C+ G+   A  +  EM    GE   +          
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM----GEKARLLDEAIELKRS 266

Query: 58  -------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
                  PD   Y  +I+G C E    +AK +LL+M D  + P+ +TYN++I GF    D
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             +A R+  EM+  G++ N++ ++ +++ +CK GKME+A ++++ M++ GV P++  Y+ 
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++G C    + RA EL   M+       V +YS++ING C+   ++G  ++  EM+  G
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------N 283
           +KP  V Y TL     +  +VE +  + + M+  G+  D + Y + I G CK        
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506

Query: 284 GYIVEALELFRTLR----------------------------ILKCEL--DIRSYSCLID 313
            Y++E LE  R LR                            +L C +  ++  Y+ LI+
Sbjct: 507 TYLMEMLE--RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 564

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G +  A+ +F  +    ++ DV TY+++IH L  +GKM +A  +F +++ KG+ P
Sbjct: 565 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   +N+L+ G  +     K  +LL  M
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEM 652



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 184/364 (50%), Gaps = 17/364 (4%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P++VI+  ++D   K GF+ +A  + L  K+    P +++ NS++      N      ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ-LLEL----------------MIQIG 160
           F  M    V P+V T++ ++   CK G +++A + LLE+                M+  G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+ + Y+ L++GFC+  R   AK + + M  +G K    +Y+ LI+G+ +  +IE A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  EM++ GI+  ++ +NTL  G+ +  ++E+A ++  EM   GV  D+  Y   I+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C+   +  A EL   ++  K    + +YS +I+GLC+ G L+    +   +    L  + 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V Y  ++ A   +G+++++  +   M  +G+ PD   +N+L++G  +     +    L  
Sbjct: 452 VVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLME 511

Query: 401 MDER 404
           M ER
Sbjct: 512 MLER 515



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 13/283 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  ++  G  PN +TY+ +++G C++ +   A  L EEM+      GV   PDA I
Sbjct: 680 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML----LRGV--PPDAFI 733

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  I++  CKE   +KA +L  +M +K      V++N++I G+C +    EA  L  EM+
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMI 792

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++   PN VT++ ++D  CK G M EA +L   M +  V P A  Y +L+ G+   G ++
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI------KPTVV 236
               LF  M + G + +  +Y ++I+ YC+   +  A  L  E+L KG+      +  + 
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLP 912

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           T + +  G      ++ A ++   M + G  ++T +    +DG
Sbjct: 913 TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ +++     P   TY++L++G    G+      LFEEM+    E      PD +
Sbjct: 818 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIE------PDKM 871

Query: 62  IYTTIIDGLCKEGFVDKA----KELLLQ---MKDKNINPDVVTYNSVIRGFCYANDSNEA 114
            Y  +ID  C+EG V +A     E+L++   MK       + T + + RGF  A + +EA
Sbjct: 872 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMKS-GFRLGLPTCSVIARGFQIAGNMDEA 930

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
             +   M+  G   N  +   ++D        E++  LL+ M
Sbjct: 931 AEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 230/434 (52%), Gaps = 29/434 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NG--------NGE 51
           MEA  +F  +   G +PN  TY TL++G    G  +   +L + M+ NG        N  
Sbjct: 325 MEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNIL 384

Query: 52  FGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
            G   K                    PD V Y  ++D LC  G VD A     ++  + +
Sbjct: 385 IGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL 444

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD V + ++I G C  +  ++A+ L +EM+ +G+ PN + F+ +++ LCK G +  A  
Sbjct: 445 TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +LM+++ V+ +   YNTL+DG+CL G+V+ A +L   M   G K N  +Y+ +INGYC
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  IE A SL+ +M SKG+ P +VTY+T+  GLF+  +   A +L+  M + G+  D  
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    +AL +F+ L ++   L+ R+++ +ID L K GR   A +LF SL
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASL 684

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +VVTY +M+ +L   G +++  DLFL +E  G   +    N L+   ++  E 
Sbjct: 685 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEV 744

Query: 392 SKVVELLHRMDERN 405
            K    L ++DE N
Sbjct: 745 RKAGVYLSKIDENN 758



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 217/460 (47%), Gaps = 72/460 (15%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           ++   GC PNV +Y+ L+ GLC    +  AL+L   M+  +   G    PD V Y T+I+
Sbjct: 152 RMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY-PPDVVSYNTVIN 210

Query: 69  GLCKEGF-VDKAKELLLQMKDKNINPDVVTYNSVI------------------------- 102
           GL +EG  +D A  L  QM D+ ++PDVVTYNS+I                         
Sbjct: 211 GLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAM 270

Query: 103 ----------RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
                      G+C +   N+A  +F  M   GV+P+V T++ +M  LCKNG+  EA ++
Sbjct: 271 PNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKI 330

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M++ G +PN+  Y TL+ G+   G + +   L   M   G + + + ++ILI  Y K
Sbjct: 331 FDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK 390

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           + +++ A+ L+S+M  +G+ P  VTY  +   L  + +V+ A   F  +   G+  D   
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450

Query: 273 YRTFIDG-----------------------------------LCKNGYIVEALELFRTLR 297
           +R  I G                                   LCK G +  A  +F  + 
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  + D+ +Y+ LIDG C  G++  A +L   +    +  + VTYN MI+  C +G+++
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            A  LF  M +KGV P  V ++T++ G  +   T+   EL
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 193/386 (50%), Gaps = 11/386 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A   ++   G     IT+S L+  LC    T  A+++    +   G     C P+   
Sbjct: 110 AFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLG-----CTPNVFS 164

Query: 63  YTTIIDGLCKEGFVDKAKELLLQM-----KDKNINPDVVTYNSVIRGFCYANDS-NEAKR 116
           YT ++ GLC E    +A  LL  M           PDVV+YN+VI G        + A  
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYH 224

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M+DQG+ P+VVT++ I+  L K   M++A+ +L  M++ G  PN   +N+L+ G+C
Sbjct: 225 LFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYC 284

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +G+ N A  +F  M   G + +VF+Y+ L+   CKN     A  ++  M+ +G KP   
Sbjct: 285 SSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSA 344

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY TL  G      + +   L D M R+G+  D + +   I    K+G + +A+ LF  +
Sbjct: 345 TYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKM 404

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      D  +Y  ++D LC  G++  A   F  L    L  D V +  +IH LCA  K 
Sbjct: 405 RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKW 464

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           DKA +L ++M  +G+ P+ + FNTL+
Sbjct: 465 DKAEELAVEMIGRGICPNNIFFNTLL 490



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 207/421 (49%), Gaps = 43/421 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G EP+V TY+TL+  LC+ G ++ A  +F+ M+          KP++ 
Sbjct: 291 DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH------KPNSA 344

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   EG + K   LL  M    I PD   +N +I  +      ++A  LF +M
Sbjct: 345 TYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKM 404

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+ ++MD LC  GK+++A      +I  G+ P+A V+  L+ G C   + 
Sbjct: 405 RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKW 464

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++A+EL V M   G C +N+F ++ L+N  CK   +  A +++  M+   ++  V+TYNT
Sbjct: 465 DKAEELAVEMIGRGICPNNIF-FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +V+ A KL + M   GV  +   Y T I+G CKNG I +A  LFR +    
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY----------------- 343
               I +YS ++ GL ++ R   A EL+  + +  +  D+ TY                 
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL 643

Query: 344 ------------------NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                             NIMI AL   G+ D+A DLF  + A+G+ P+ V +  +M   
Sbjct: 644 RIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 703

Query: 386 I 386
           I
Sbjct: 704 I 704



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 11/307 (3%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG---VRPN 164
             DS+ A   F E++ +    ++V  +  + +  ++     A  L   M+ +    V PN
Sbjct: 32  GTDSHHAHHAFDELLHRPTTSSIVDLNRALSDAARHSP-AVAISLFRRMVMVARPKVPPN 90

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL-Y 223
              Y+ ++D     G ++ A      +   G      ++S L+   C  K    A+ +  
Sbjct: 91  LITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIAL 150

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-----QRHGVAADTWAYRTFID 278
             M   G  P V +Y  L  GL + ++ ++A  L   M      R G   D  +Y T I+
Sbjct: 151 RRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVIN 210

Query: 279 GLCKNGYIVE-ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           GL + G  ++ A  LF  +       D+ +Y+ +I  L K+  +  A  +   + +   +
Sbjct: 211 GLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAM 270

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            + +T+N ++H  C+ GK + A  +F  M   GV PD   +NTLM    +N  + +  ++
Sbjct: 271 PNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKI 330

Query: 398 LHRMDER 404
              M +R
Sbjct: 331 FDSMVKR 337


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/396 (34%), Positives = 214/396 (54%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G  PN+ TY+  I  L R G    A  + + M +        C PD V YT 
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG------CGPDVVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LC  G +DKAKEL  +M+  +  PD+VTY +++  F    D    KR + EM   G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+VVT++++++ LCK+GK+++A  +L++M   G+ PN   YNTL+ G     R++ A 
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF +MES+G     +SY + I+ Y K  + E AL  + +M  +GI P++   N     L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            E+ ++  A  +F+++   G++ D+  Y   +    K G I +A +L   +    CE DI
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              + LID L K+GR+  AW++F  L    L   VVTYNI+I  L  +GK+ KA DLF  
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M+  G  P+ V FN L+    +N+     +++  RM
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 216/441 (48%), Gaps = 44/441 (9%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            ++A  LF  +K  GC PN +T++ L++ LC+     +AL +F  M   N      C PD 
Sbjct: 594  LKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN------CSPDV 647

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            + Y TII GL KEG    A     QMK K ++PD VT  +++ G        +A ++ +E
Sbjct: 648  LTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706

Query: 121  MMDQ-GVQPN--------------------------VVTFSVIMDE---------LCKNG 144
             + Q G+Q +                          +V  S+  D+         LCK  
Sbjct: 707  FVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQK 766

Query: 145  KMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            K  +A +L +   + +G  P    YN LMDG         A +LFV M++ GC  N+F+Y
Sbjct: 767  KALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTY 826

Query: 204  SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            ++L++ + K+K I+    LY+EML +G KP ++T+N +   L + + + +A  L+ E+  
Sbjct: 827  NLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIIS 886

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
               +     Y   I GL K G   EA+++F  +   +C+ +   Y+ LI+G  K+G + I
Sbjct: 887  GDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNI 946

Query: 324  AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            A +LF  + +  +  D+ +Y I++  L   G++D A   F +++  G+ PD V++N ++ 
Sbjct: 947  ACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMIN 1006

Query: 384  GCIRNNETSKVVELLHRMDER 404
            G  ++    + + L   M  R
Sbjct: 1007 GLGKSRRLEEALSLFSEMKNR 1027



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 201/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K++  G   N  +Y+ LI  L + G    AL +++ MI+         KP   
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG------LKPSMK 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++  L +        +LL +M+   + P++ TY   IR    A   ++A  +   M
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VVT++V++D LC  GK+++A +L   M     +P+   Y TLM  F   G +
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K  +  ME+ G   +V +Y+IL+   CK+ +++ A  +   M  +GI P + TYNTL
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A +LF+ M+  GVA   ++Y  FID   K G   +AL+ F  ++    
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              I + +  +  L + GR++ A ++F+ +    L  D VTYN+M+      G++DKA  
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M ++G  PD +  N+L+    +     +  ++  R+ +
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   ++  GC P+V+TY+ LI+ LC  G    A  L+ +M   +       KPD V
Sbjct: 280 DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH------KPDLV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++      G ++  K    +M+     PDVVTY  ++   C +   ++A  +   M
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+ T++ ++  L    +++EA +L   M  +GV P A+ Y   +D +   G  
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A + F  M+  G   ++ + +  +    +   I  A  +++++ + G+ P  VTYN +
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  Q+++A KL  EM   G   D     + ID L K G + EA ++F  L+ LK 
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKL 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ LI GL K G+L  A +LF S+       + VT+N ++  LC +  +D A  
Sbjct: 574 APTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALK 633

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +F  M     +PD + +NT++ G I+           H+M +
Sbjct: 634 MFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK 675



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 190/393 (48%), Gaps = 42/393 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+TK++A   +P+++TY TL++     G        + EM   +G       PD V
Sbjct: 315 KAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM-EADGY-----APDVV 368

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++ LCK G VD+A ++L  M+ + I P++ TYN++I G       +EA  LF  M
Sbjct: 369 TYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM 428

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P   ++ + +D   K G  E+A    E M + G+ P+    N  +      GR+
Sbjct: 429 ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRI 488

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
             AK++F  + + G   +  +Y++++  Y K  +I+ A  L +EMLS+G           
Sbjct: 489 REAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSL 548

Query: 231 ------------------------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                   + PTVVTYN L  GL +  ++ +A  LF  M+  G 
Sbjct: 549 IDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGC 608

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +T  +   +D LCKN  +  AL++F  + I+ C  D+ +Y+ +I GL K GR   A+ 
Sbjct: 609 PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFW 668

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +H + +  L  D VT   ++  +  DG+++ A
Sbjct: 669 FYHQMKK-FLSPDHVTLYTLLPGVVKDGRVEDA 700



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 5/361 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            LI  LC+    + A  LF++     G       P    Y  ++DGL      + A +L +
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLG-----THPTPESYNCLMDGLLGCNITEAALKLFV 812

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +MK+    P++ TYN ++     +   +E   L+ EM+ +G +PN++T ++I+  L K+ 
Sbjct: 813  EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             + +A  L   +I     P    Y  L+ G    GR   A ++F  M    CK N   Y+
Sbjct: 873  SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K   +  A  L+  M+ +GI+P + +Y  L   LF   +V+ A   F+E++  
Sbjct: 933  ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  DT +Y   I+GL K+  + EAL LF  ++      ++ +Y+ LI     +G +  A
Sbjct: 993  GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             ++F  L    L  +V TYN +I      G  D+A  +F  M   G +P+   F  L   
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112

Query: 385  C 385
            C
Sbjct: 1113 C 1113



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 22/382 (5%)

Query: 16  EPN-VITYSTLINGLCRTGHTIVALNLFEEMINGNGE-------FGVVCKP----DAVIY 63
           +PN  ++Y  +++ L    HT    N   E +  +G        F ++ K     +   Y
Sbjct: 101 DPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTY 160

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI-----RGFCYANDSNEAKRLF 118
            TI   L  +G + +A   L +M+      +  +YN +I      GFC      EA +++
Sbjct: 161 LTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFC-----KEALKVY 215

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+ +G++P++ T+S +M  L +         LLE M  +G+RPN + Y   +      
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR++ A  +  +ME  GC  +V +Y++LI+  C   +++ A  LY++M +   KP +VTY
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL         +E   + + EM+  G A D   Y   ++ LCK+G + +A ++   +R+
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV 395

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +Y+ LI GL    RL  A ELF+++    +     +Y + I      G  +K
Sbjct: 396 RGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEK 455

Query: 359 AHDLFLDMEAKGVAPDCVAFNT 380
           A D F  M+ +G+ P   A N 
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNA 477



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 195/430 (45%), Gaps = 32/430 (7%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------------ 50
            A   + ++K F   P+ +T  TL+ G+ + G    A+ +  E ++ +G            
Sbjct: 666  AFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELM 724

Query: 51   ---------------EFGVVCKP---DAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNI 91
                             G+VC     D  +   +I  LCK+     AK+L  +  K    
Sbjct: 725  ECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGT 784

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            +P   +YN ++ G    N +  A +LF+EM + G  PN+ T+++++D   K+ +++E  +
Sbjct: 785  HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            L   M+  G +PN   +N ++     +  +N+A +L+  + S        +Y  LI G  
Sbjct: 845  LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            K    E A+ ++ EM     KP    YN L  G  +   V  A  LF  M + G+  D  
Sbjct: 905  KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +Y   ++ L   G + +A+  F  L++   + D  SY+ +I+GL KS RL+ A  LF  +
Sbjct: 965  SYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEM 1024

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                +  ++ TYN +I      G +D+A  +F +++  G+ P+   +N L+ G  ++   
Sbjct: 1025 KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084

Query: 392  SKVVELLHRM 401
             +   +  +M
Sbjct: 1085 DRAFSVFKKM 1094



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 145/272 (53%), Gaps = 6/272 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   L+ ++   GC+PN+IT++ +I+ L ++     AL+L+ E+I+G+        P   
Sbjct: 841  ELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGD------FSPTPC 894

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I GL K G  ++A ++  +M D    P+   YN +I GF  A + N A  LF  M
Sbjct: 895  TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G++P++ +++++++ L   G++++A    E +   G+ P+   YN +++G   + R+
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A  LF  M++ G    +++Y+ LI  +     ++ A  ++ E+   G++P V TYN L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              G  +    +RAF +F +M   G + +   +
Sbjct: 1075 IRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 132/287 (45%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  Q +  N  T+  I   L   G + +A   L  M Q G   NA+ YN L+    
Sbjct: 144 VFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G    A +++  M S G K ++ +YS L+    + ++    + L  EM + G++P + 
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY      L    +++ A+ +   M+  G   D   Y   ID LC  G + +A EL+  +
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R    + D+ +Y  L+      G L+     +  +       DVVTY I++ ALC  GK+
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+A D+   M  +G+ P+   +NTL+ G +      + +EL + M+ 
Sbjct: 384 DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  +F ++  + C+PN   Y+ LING  + G+  +A +LF+ MI          +PD  
Sbjct: 911  EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG------IRPDLK 964

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT +++ L   G VD A     ++K   ++PD V+YN +I G   +    EA  LF EM
Sbjct: 965  SYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEM 1024

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P + T++ ++      G +++A ++ E +  +G+ PN F YN L+ G   +G  
Sbjct: 1025 KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
            +RA  +F  M  +GC  N  +++ L N
Sbjct: 1085 DRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 226/433 (52%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV- 55
           EA  LF  +   G +PNV  Y  LI+G    G     H ++ L +   +   +  F ++ 
Sbjct: 326 EARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V Y  +ID LCK G VD A     QM ++ + 
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++  +NS++ G C  +   +AK  + EM++QG++P+VV F+ I+  LC  G++ +A +L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++LM ++G RP    Y TL+ G CL GR++ A +    M S+G K + ++Y+ L++GYC+
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  ++ EML  GI P VVTY+T+  GLF   +   A +L+  M   G   + W 
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GL KN  + EA +LF++L     +L+I +++ +I  L KSGR + A  LF ++ 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY ++   L  +G +++  DLF  ME  G  P+    N L+   +   + +
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 746 RAGAYLCKLDEKN 758



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 210/396 (53%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC P+V++Y+TL+ G C       AL L   M +  G     C P+ V Y  
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAI 208

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G   EG VDKA  L L+M D+ I P+VVTY +VI G C A   + A+ +F +M+D+G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+  T++ ++      GK +E  ++LE M   G++P+ + Y +L++  C  GR   A+
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF SM   G K NV  Y ILI+GY     +     L + M+  G+ P    +N +F   
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A  +F++M++ G++ D   Y   ID LCK G + +A+  F  +       +I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             ++ L+ GLC   + + A E +  +    +  DVV +N ++  LC  G++ KA  L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 366 MEAKGVAPDCVAFNTLMLG-CI--RNNETSKVVELL 398
           ME  G  P  +++ TL+ G C+  R +E +K ++++
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM 544



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 11/406 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  +   G   N I  + L+ GLC       A+++   ++    E G  C PD V Y 
Sbjct: 115 ATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI---LVKRMPELG--CTPDVVSYN 169

Query: 65  TIIDGLCKEGFVDKAKELLLQMKD---KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           T++ G C E   ++A ELL  M D   ++  P+VV+Y  VI GF      ++A  LF+EM
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM 229

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           MD+G+QPNVVT++ ++D LCK   ++ A  + + MI  GV+P+   YN L+ G+   G+ 
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +   M + G K + ++Y  L+N  C N     A  L+  M+ KGIKP V  Y  L
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     L + M  +G++ D   +        K   I EA+ +F  ++    
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y  LID LCK GR+  A   F+ +    +  ++  +N +++ LC   K +KA +
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNN--ETSKVVELLHRMDER 404
            + +M  +G+ PD V FNT++   C +    +  ++++L+ R+  R
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 215/471 (45%), Gaps = 76/471 (16%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   +    +   C PNV++Y+ +ING    G    A NLF EM++         +P+ 
Sbjct: 185 LELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRG------IQPNV 238

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF--------------- 105
           V YTT+IDGLCK   VD+A+ +  QM DK + PD  TYN +I G+               
Sbjct: 239 VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298

Query: 106 ---------CYANDS-----------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                    CY   S            EA+ LF  M+ +G++PNV  + +++      G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 146 MEEASQLLELMIQIGVRPNAFVYN-----------------------------------T 170
           + E   LL LM++ G+ P+  ++N                                    
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+D  C  GRV+ A   F  M + G   N+F ++ L+ G C   + E A   Y EML++G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           I+P VV +NT+   L    QV +A +L D M+R G      +Y T I G C  G I EA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           +    +  +  + D  +Y+ L+ G C++GR+  A+ +F  + R  +   VVTY+ ++H L
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +  +A +L+L+M   G   +   +N ++ G  +NN   +  +L   +
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 188/387 (48%), Gaps = 41/387 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+K  G  P+V+ Y  LI+ LC+ G    A+  F +M+N     GV   P+  
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE----GVA--PNIF 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ +++ GLC     +KAKE   +M ++ I PDVV +N+++   C      +A+RL   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P V++++ ++   C  G+++EA++ L++M+ +G++P+ + YNTL+ G+C  GR+
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 182 N-----------------------------------RAKELFVSMESMGCKHNVFSYSIL 206
           +                                    AKEL+++M + G + N++ Y+I+
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG  KN  ++ A  L+  + SK  +  + T+N +   LF+  + E A  LF  +  +G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D + Y    + L + GY+ E  +LF  +       + R  + L+  L   G +  A  
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCAD 353
               L       +  T  ++I  L  D
Sbjct: 750 YLCKLDEKNFSLEASTTAMLISLLSRD 776



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 4/318 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD  TY+ +I  FC           F  ++  G + N +  + ++  LC   ++ EA 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 151 QLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMG--CKHNVFSYSIL 206
            +L + M ++G  P+   YNTL+ GFC   R   A EL   M +S G  C  NV SY+I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+    +++ A +L+ EM+ +GI+P VVTY T+  GL +   V+RA  +F +M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I G    G   E + +   +     + D  +Y  L++ LC +GR + A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF S+ R  +  +V  Y I+IH     G + + HDL   M   G++PD   FN +     
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 387 RNNETSKVVELLHRMDER 404
           +     + + + ++M ++
Sbjct: 390 KKAMIDEAMHIFNKMKQQ 407



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 6/299 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   ++  G  P VI+Y+TLI G C  G    A    + M++      V  KPD 
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS------VGLKPDE 553

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G C+ G +D A  +  +M    I P VVTY++++ G       +EAK L++ 
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q N+  +++I++ L KN  ++EA +L + +     +     +N ++     +GR
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  LF ++ S G   +VF+Y ++     +   +E    L+S M   G  P     N 
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L   L     + RA     ++     + +       I  L ++ Y   A  L    R+L
Sbjct: 734 LVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 49/341 (14%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ----------IGV 161
           ++A +LF  ++      +V+ F+ ++  + +      ++   EL++           I V
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 162 RPNAFVYNTLMDGFCLTGRVNR-----------------------------AKELFVSME 192
            P+   Y+ L+  FC  GR+                               AK L  +M+
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 193 -------SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPTVVTYNTLF 242
                   +GC  +V SY+ L+ G+C  K  E AL L   M     +   P VV+Y  + 
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F   QV++A+ LF EM   G+  +   Y T IDGLCK   +  A  +F+ +     +
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+CLI G    G+ K    +   +    L  D  TY  +++ LC +G+  +A  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M  KG+ P+   +  L+ G       S++ +LL+ M E
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/359 (37%), Positives = 195/359 (54%), Gaps = 6/359 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  + A G  PNV+TY TLI+G CR G  + A  LF+EMI           P  VIYT 
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTI 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC E  + +A+ +   M++  + P++ TYN+++ G+C      +A  L+ EM+  G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNVVTF +++D LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A 
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   +E      +VF+YSILI G C    +E A  L  EM  KG  P  VTYNTL  G 
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E+A ++  +M   G+  +   + T IDG CK G +  A+ L+  + I     D+
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +Y+ LIDG  K G  K A+ L   +    L  +V T + +I  LC DG++  A  LFL
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 209/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ K+      P +   + +++GL + G       ++ +M+           P+ V
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS------PNVV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C++G   KA  L  +M +K I P VV Y  +IRG C  +  +EA+ +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ T++ +MD  CK   +++A +L + M+  G+ PN   +  L+DG C T  +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I P V TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +     
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +I ++S LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A  
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +M+  G+ P+    + L+ G  ++   S  ++L 
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 196/391 (50%), Gaps = 11/391 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY-----------TTIIDGLCK 72
           ++ N L R   +    N+F  +I    E G+V +   V Y             ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G  D   ++   M  +  +P+VVTY ++I G C   D  +A RLF EM+++ + P VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +++++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C    V +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   NV ++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  E+++H +  D + Y   I GLC    + EA  L + ++      +  +Y+ LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK G ++ A E+   +    +  +++T++ +I   C  GKM+ A  L+ +M  KG+ 
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD VA+  L+ G  ++  T +   L   M E
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 172/328 (52%), Gaps = 41/328 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGL------------------------------- 29
           ++A  LF ++      P V+ Y+ LI GL                               
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 30  ----CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
               C+  H   AL L++EM+ G+G       P+ V +  +IDGLCK   +  A++ L+ 
Sbjct: 270 MDGYCKIAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M    + P++  YN +I G+C A + +EA  L  E+    + P+V T+S+++  LC   +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           MEEA  LL+ M + G  PNA  YNTL+DG+C  G + +A E+   M   G + N+ ++S 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+GYCK  ++E A+ LY+EM+ KG+ P VV Y  L  G F+    + AF+L  EMQ  G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELF 293
           +  + +     IDGLCK+G I +A++LF
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 5/323 (1%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +L +++     P+V  +  +I  F       EA  ++ +M    V P +   ++++D L 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G+ +   ++   M+  G  PN   Y TL+DG C  G   +A  LF  M        V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ILI G C    I  A S++  M + G+ P + TYNT+  G  +I  V++A +L+ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  +   +   IDGLCK   +V A +    +       +I  Y+CLIDG CK+G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  L   + +  ++ DV TY+I+I  LC   +M++A  L  +M+ KG  P+ V +NTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +     K +E+  +M E+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEK 432



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 197/412 (47%), Gaps = 48/412 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L ++++     P+V TYS LI GLC       A  L +EM     + G +  P+AV
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM----KKKGFL--PNAV 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CKEG ++KA E+  QM +K I P+++T++++I G+C A     A  L+ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+VV ++ ++D   K+G  +EA +L + M + G+ PN F  + L+DG C  GR+
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 182 NRAKELFVS---MESMGCKHNVFSYSI---------LING--------------YCKNKE 215
           + A +LF++    ++ G K N    S+         L  G              +  N +
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQ 584

Query: 216 IEGAL--SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +  L   L     ++ +K  + + NT  + LF        F++   ++++  + D+++ 
Sbjct: 585 PKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLF--------FRIL--LRKNPSSIDSFSL 634

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              +        +VE  ++   +     E  I   + LI     +G +  A  +F  +P 
Sbjct: 635 MFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPS 694

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                +++++  +I A   + + +KA  LF  M+   V PD V     +  C
Sbjct: 695 ----KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSAC 742



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 177/443 (39%), Gaps = 80/443 (18%)

Query: 1   MEAA-ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           MEAA  L+T++   G  P+V+ Y+ LI+G  + G+T  A  L +EM     E G+   P+
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM----QEAGL--HPN 507

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMK------DKNINPDVVTYN------SVIRGFC- 106
               + +IDGLCK+G +  A +L L          K    D   Y       S+ RG   
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISE 567

Query: 107 -------------------------------------YANDSNEAK-RLFIEMMDQGVQP 128
                                                Y   SN +K  LF  ++ +    
Sbjct: 568 PCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPS 627

Query: 129 NVVTFSVI--MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           ++ +FS++  +        + E  Q+  L+I  G  P  F+  +L+  +  TG V  A  
Sbjct: 628 SIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHN 687

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +F  + S     N+ S++ +I+ Y  N+    AL L+ +M    ++P +VT         
Sbjct: 688 MFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACA 743

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++  ++    +   ++  G+  D     + I+   K G I  A    R   +L  ++   
Sbjct: 744 DLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR---RFSLVLPNDVTFM 800

Query: 307 S--YSCLIDGLCKSGR--LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +C   GL + G+   +   E +   PR      +  +  M+  LC  G + +A++ 
Sbjct: 801 GVLMACSHAGLVEEGKQHFRSMKEDYSLRPR------ISHFGCMVDLLCRAGLLTEAYEF 854

Query: 363 FLDMEAKGVAPDCVAFNTLMLGC 385
            L M    V P+ V + TL+  C
Sbjct: 855 ILKMP---VRPNAVVWRTLLGAC 874


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 214/403 (53%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+  G  P+VITY+ LI+G C+TG    AL L + M            PD V
Sbjct: 163 KATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---------SVSPDVV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +   +   PDV+TY  +I   C  +   +A +L  EM
Sbjct: 214 TYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G +P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRW 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++    M   GC  +V +++ILIN  C+   I  A+ +  +M   G  P  ++YN L
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++ERA +  D M   G   D   Y T +  LCK+G +  A+E+   L    C
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC 453

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K G+   A +L   +    L  D++TY+ ++  L  +GK+D+A  
Sbjct: 454 SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F D+E  GV P+ + +N++MLG  +  +T + ++ L  M  R
Sbjct: 514 FFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR 556



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  +    L      P+V+TY+T++  LC +G    A+ + +  +         C PD +
Sbjct: 195 EIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE------CYPDVI 248

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+  CKE  V +A +LL +M+DK   PDVVTYN +I G C     +EA R    M
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM 308

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G QPNV+T ++I+  +C  G+  +A + L  MI+ G  P+   +N L++  C  G +
Sbjct: 309 PSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLI 368

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA ++   M   GC  N  SY+ L++  CK+K++E A+     M+S+G  P +VTYNTL
Sbjct: 369 GRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTL 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V+ A ++ +++   G +     Y T IDGL K G   +A++L   ++    
Sbjct: 429 LTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGL 488

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +YS L+ GL + G++  A   FH L    +  + +TYN ++  LC   +  +A D
Sbjct: 489 KPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAID 548

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               M A+G  P   ++  L+ G        + +ELL+ +  R
Sbjct: 549 FLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSR 591



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 6/351 (1%)

Query: 54  VVCK---PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           +VC+   PD +  T++I GLCK G   KA  ++  ++D    PDV+TYN +I G+C   +
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
              A +L   M    V P+VVT++ I+  LC +GK++EA ++L+  +Q    P+   Y  
Sbjct: 196 IGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++  C    V +A +L   M   GCK +V +Y++LING CK   ++ A+   + M S G
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +P V+T+N +   +    +   A K   EM R G +     +   I+ LC+ G I  A+
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ++   +    C  +  SY+ L+  LCK  +++ A E    +       D+VTYN ++ AL
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C DGK+D A ++   + +KG +P  + +NT++ G  +  +T   ++LL  M
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM 483



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 175/335 (52%), Gaps = 3/335 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G +++  + L  M  +   PD++   S+IRG C    + +A R+   + D G  P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++V++   CK G++  A QLL+ M    V P+   YNT++   C +G++  A E+  
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 C  +V +Y+ILI   CK   +  A+ L  EM  KG KP VVTYN L  G+ +  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A +  + M  +G   +   +   +  +C  G  ++A +    +    C   + +++
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI+ LC+ G +  A ++   +P+     + ++YN ++HALC D KM++A +    M ++
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +NTL+    ++ +    VE+L+++  +
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK 451



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 149/277 (53%), Gaps = 6/277 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A     ++   GC P+V+T++ LIN LCR G    A+++ E+M          C P++
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG------CTPNS 387

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++  LCK+  +++A E L  M  +   PD+VTYN+++   C     + A  +  +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK ++A +LL+ M   G++P+   Y+TL+ G    G+
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A   F  +E MG K N  +Y+ ++ G CK ++   A+   + M+++G KPT  +Y  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  GL      + A +L +E+   GV   + A +  +
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 208/366 (56%), Gaps = 9/366 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E NVI+++ ++NGLC+ G    A ++ E+M      +GV   P+ + Y T+IDG CK G 
Sbjct: 152 ELNVISFNIVVNGLCKVGKLNRAGDVIEDM----KVWGV--SPNVITYNTLIDGYCKMGR 205

Query: 76  VDK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           + K   A  +L +M  K I P+ VTYN +I GFC   + + A R+F EM  QG++PNVVT
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++ LC +GK++EA  L + M+   + PN   +N L++GFC    VN A  LF  ME
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   N  +Y+ LI+ YCK+  +E A +LY+ M+ +GI P V TYN L  GL     V+
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L +EM    ++AD   Y   ID LCK G   +A++L   +          +Y+ L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG C+ G L+ A  +   + R    A+VVT+N++I   C  G+++ A+ L  +M  +G+ 
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505

Query: 373 PDCVAF 378
           P+   +
Sbjct: 506 PNRTTY 511



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 210/401 (52%), Gaps = 9/401 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +   +G + ++I+ + L++GL +         ++ EMI    E  V+       +  +
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVIS------FNIV 161

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE---AKRLFIEMMD 123
           ++GLCK G +++A +++  MK   ++P+V+TYN++I G+C      +   A  +  EM+ 
Sbjct: 162 VNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ PN VT+++++D  CK+  +  A ++   M + G+RPN   YN L++G C  G+V+ 
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M S   + NV ++++LING+CKNK +  A++L+++M  +G+ P  +TY TL  
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              +  ++E AF L++ M   G+  +   Y   I GLC+ G +  A  L   +   K   
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ LID LCK G  + A +L   +    L    VTYN ++   C +G +  A  + 
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ME KG   + V  N L+ G            LL+ M ER
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLER 502



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC---RTGHTIVALNLFEEMINGNGEFGVVCKP 58
            A  +   +K +G  PNVITY+TLI+G C   R G    A  + +EM+        +C P
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG-----IC-P 226

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           + V Y  +IDG CK+  V  A  +  +M+ + + P+VVTYN +I G C     +EA  L 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+   ++PNVVT +V+++  CKN  + EA  L   M + GV PNA  Y TL+D +C  
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR+  A  L+  M   G    V +Y+ LI G C+  +++ A SL +EM+SK +   VVTY
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L +  +  +A KL DEM   G+      Y T +DG C+ G +  AL +   +  
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
              + ++ +++ LI G C  GRL+ A  L + +    L+ +  TY I+   +   G
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 41/320 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++ A G  PN +TY+ LI+G C+  +   A+ +F EM           +P+ V
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG------LRPNVV 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLC +G VD+A  L  QM   ++ P+VVT+N +I GFC     NEA  LF +M
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV PN +T++ ++D  CK+G+ME+A  L  +MI  G+ P    YN L+ G C  G V
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILI---------------------------------- 207
             A+ L   M S     +V +Y+ILI                                  
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444

Query: 208 -NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            +GYC+   +  AL + + M  KG +  VVT+N L  G     ++E A  L +EM   G+
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL 504

Query: 267 AADTWAYRTFIDGLCKNGYI 286
             +   Y    + + + G++
Sbjct: 505 VPNRTTYEIIKEEMMEKGFV 524



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 132/248 (53%), Gaps = 11/248 (4%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+ + + L+  F    ++ R  E F      G K ++ S + L++G  K  E      +Y
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM+ + I+  V+++N +  GL ++ ++ RA  + ++M+  GV+ +   Y T IDG CK 
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 284 GYIVEALELFRTLRILK-------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           G I    ++++   ILK       C  ++ +Y+ LIDG CK   +  A  +F  + R  L
Sbjct: 204 GRIG---KMYKADAILKEMVAKGICPNEV-TYNILIDGFCKDENVSGAMRVFGEMQRQGL 259

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             +VVTYNI+I+ LC+DGK+D+A  L   M +  + P+ V  N L+ G  +N   ++ + 
Sbjct: 260 RPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAIN 319

Query: 397 LLHRMDER 404
           L + M+++
Sbjct: 320 LFNDMEKQ 327


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 217/400 (54%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+  G  P+VITY+ LI+G C++G    AL + + M            PD V
Sbjct: 167 KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---------NVAPDVV 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +   K   PDV+TY  +I   C  +   +A +L  EM
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 277

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 278 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 337

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M   GC  +V +++ILIN  C+   +  A+ +  +M   G  P  ++YN L
Sbjct: 338 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 397

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  D M   G   D   Y T +  LCK+G +  A+E+   L    C
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K G+ + A +L   + R  L  D++TY+ ++  L  +GK+D+A  
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F D+E  G+ P+ + +N++MLG  ++ +T + ++ L  M
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 206/388 (53%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY+T++  LC +G    A+ + +  +         C PD + YT +I+  CKE  V
Sbjct: 214 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE------CYPDVITYTILIEATCKESGV 267

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A +LL +M++K   PDVVTYN +I G C     +EA +    M   G QPNV+T ++I
Sbjct: 268 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 327

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   GC
Sbjct: 328 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+CK K+++ A+     M+S+G  P +VTYNTL   L +  +V+ A +
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 447

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + +++   G +     Y T IDGL K G    A++L   +R    + DI +YS L+ GL 
Sbjct: 448 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 507

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G++  A + FH L    +  + +TYN ++  LC   + D+A D    M +K   P   
Sbjct: 508 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 567

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  L+ G        + ++LL+ +  R
Sbjct: 568 TYTILIEGIAYEGLAKEALDLLNELCSR 595



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 178/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G +P+V+TY+ LING+C+ G    A+     M +    +G  C+P+ +
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS----YG--CQPNVI 322

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+  +C  G    A++LL  M  K  +P VVT+N +I   C       A  +  +M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM+ A + L++M+  G  P+   YNTL+   C  G+V
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   + S GC   + +Y+ +I+G  K  + E A+ L  EM  KG+KP ++TY++L
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +V+ A K F +++  G+  +   Y + + GLCK+     A++    +   +C
Sbjct: 503 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 562

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
           +    +Y+ LI+G+   G  K A +L + L  RG++
Sbjct: 563 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 175/335 (52%), Gaps = 3/335 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G ++   + L  M  +   PD++   S+IRGFC    + +A  +   +   G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++V++   CK+G+++ A Q+L+ M    V P+   YNT++   C +G++ +A E+  
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 C  +V +Y+ILI   CK   +  A+ L  EM +KG KP VVTYN L  G+ +  
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A +L   +    C   + +++
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI+ LC+ G L  A ++   +P      + ++YN ++H  C + KMD+A +    M ++
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +NTL+    ++ +    VE+L+++  +
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 152/273 (55%), Gaps = 8/273 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           M+A  L + +   GC P+V+T++ LIN LCR G    A+++ E+M ++G       C P+
Sbjct: 338 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-------CTPN 390

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++ Y  ++ G CKE  +D+A E L  M  +   PD+VTYN+++   C     + A  +  
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++  +G  P ++T++ ++D L K GK E A +LL+ M + G++P+   Y++L+ G    G
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KPT  TY 
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            L  G+      + A  L +E+   G+   + A
Sbjct: 571 ILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 603


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 217/400 (54%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+  G  P+VITY+ LI+G C++G    AL + + M            PD V
Sbjct: 110 KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---------NVAPDVV 160

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +   K   PDV+TY  +I   C  +   +A +L  EM
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 280

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M   GC  +V +++ILIN  C+   +  A+ +  +M   G  P  ++YN L
Sbjct: 281 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  D M   G   D   Y T +  LCK+G +  A+E+   L    C
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K G+ + A +L   + R  L  D++TY+ ++  L  +GK+D+A  
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F D+E  G+ P+ + +N++MLG  ++ +T + ++ L  M
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 500



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 206/388 (53%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY+T++  LC +G    A+ + +  +         C PD + YT +I+  CKE  V
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE------CYPDVITYTILIEATCKESGV 210

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A +LL +M++K   PDVVTYN +I G C     +EA +    M   G QPNV+T ++I
Sbjct: 211 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 270

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   GC
Sbjct: 271 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+CK K+++ A+     M+S+G  P +VTYNTL   L +  +V+ A +
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 390

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + +++   G +     Y T IDGL K G    A++L   +R    + DI +YS L+ GL 
Sbjct: 391 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 450

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G++  A + FH L    +  + +TYN ++  LC   + D+A D    M +K   P   
Sbjct: 451 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 510

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  L+ G        + ++LL+ +  R
Sbjct: 511 TYTILIEGIAYEGLAKEALDLLNELCSR 538



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 178/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G +P+V+TY+ LING+C+ G    A+     M +    +G  C+P+ +
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS----YG--CQPNVI 265

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+  +C  G    A++LL  M  K  +P VVT+N +I   C       A  +  +M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM+ A + L++M+  G  P+   YNTL+   C  G+V
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   + S GC   + +Y+ +I+G  K  + E A+ L  EM  KG+KP ++TY++L
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +V+ A K F +++  G+  +   Y + + GLCK+     A++    +   +C
Sbjct: 446 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
           +    +Y+ LI+G+   G  K A +L + L  RG++
Sbjct: 506 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 175/335 (52%), Gaps = 3/335 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G ++   + L  M  +   PD++   S+IRGFC    + +A  +   +   G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++V++   CK+G+++ A Q+L+ M    V P+   YNT++   C +G++ +A E+  
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 C  +V +Y+ILI   CK   +  A+ L  EM +KG KP VVTYN L  G+ +  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A +L   +    C   + +++
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI+ LC+ G L  A ++   +P      + ++YN ++H  C + KMD+A +    M ++
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  PD V +NTL+    ++ +    VE+L+++  +
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 152/273 (55%), Gaps = 8/273 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           M+A  L + +   GC P+V+T++ LIN LCR G    A+++ E+M ++G       C P+
Sbjct: 281 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-------CTPN 333

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++ Y  ++ G CKE  +D+A E L  M  +   PD+VTYN+++   C     + A  +  
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++  +G  P ++T++ ++D L K GK E A +LL+ M + G++P+   Y++L+ G    G
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KPT  TY 
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            L  G+      + A  L +E+   G+   + A
Sbjct: 514 ILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   L+  G  P+VITY+ +I+G C+ G    AL++ + M            PD V
Sbjct: 155 KAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---------SVSPDVV 205

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +M  ++  PDV+TY  +I   C  +   +A +L  EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M   G   +V +++ILIN  C+   +  A+ +  +M   G +P  ++YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G + +A+E+   L    C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K+G+   A +L   +    L  D +TY+ ++  L  +GK+D+A  
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F + E  GV P+ V FN++MLG  +  +T + ++ L  M  R
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548



 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 212/392 (54%), Gaps = 6/392 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L      P+V+TY+T++  LC +G    A+ + + M+  +      C PD + YT +I+ 
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEA 248

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C++  V +A +LL +M+D+   PDVVTYN ++ G C     +EA +   +M   G QPN
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC+ N  SY+ L++G+CK K+++ A+     M+S+G  P +VTYNT+   L +  
Sbjct: 369 KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +VE A ++ +++   G +     Y T IDGL K G   +A++L   +R    + D  +YS
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+ GL + G++  A + FH   R  +  + VT+N ++  LC   + D+A D  + M  +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G  P   ++  L+ G        + +ELL+ +
Sbjct: 549 GCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 206/371 (55%), Gaps = 8/371 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++    C P+VITY+ LI   CR      A+ L +EM +        C PD V
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG------CTPDVV 275

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++G+CKEG +D+A + L  M      P+V+T+N ++R  C      +A++L  +M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VVTF+++++ LC+ G +  A  +LE M + G +PN+  YN L+ GFC   ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKM 395

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA E    M S GC  ++ +Y+ ++   CK+ ++E A+ + +++ SKG  P ++TYNT+
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +  +A KL DEM+   +  DT  Y + + GL + G + EA++ F     +  
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGV 515

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +++ ++ GLCK+ +   A + L + + RG    +  +Y I+I  L  +G   +A 
Sbjct: 516 RPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTET-SYTILIEGLAYEGMAKEAL 574

Query: 361 DLFLDMEAKGV 371
           +L  ++  KG+
Sbjct: 575 ELLNELCNKGL 585



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 198/378 (52%), Gaps = 11/378 (2%)

Query: 29  LCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           L RTG         E M+ +GN        PD +  TT+I G C+ G   KA ++L  ++
Sbjct: 112 LVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRMGKTRKAAKILEVLE 164

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                PDV+TYN +I G+C A + N A  +   M    V P+VVT++ I+  LC +GK++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A ++L+ M+Q    P+   Y  L++  C    V +A +L   M   GC  +V +Y++L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CK   ++ A+   ++M S G +P V+T+N +   +    +   A KL  +M R G +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                +   I+ LC+ G +  A+++   +    C+ +  SY+ L+ G CK  ++  A E 
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +       D+VTYN M+ ALC DGK++ A ++   + +KG +P  + +NT++ G  +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 388 NNETSKVVELLHRMDERN 405
             +T K ++LL  M  ++
Sbjct: 462 AGKTGKAIKLLDEMRAKD 479



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 146/267 (54%), Gaps = 3/267 (1%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + +L + G++EE  + LE M+  G  P+     TL+ GFC  G+  +A ++   +E  G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+++I+GYCK  EI  ALS+   M    + P VVTYNT+   L +  ++++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D M +     D   Y   I+  C++  + +A++L   +R   C  D+ +Y+ L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL  A +  + +P      +V+T+NI++ ++C+ G+   A  L  DM  KG +P  V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    R     + +++L +M +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPK 372



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V  N+ +R      +  E  +    M+  G  P+++  + ++   C+ GK  +A+++LE+
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           +   G  P+   YN ++ G+C  G +N A  +   ++ M    +V +Y+ ++   C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+ +   ML +   P V+TY  L         V +A KL DEM+  G   D   Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++G+CK G + EA++    +    C+ ++ +++ ++  +C +GR   A +L   + R  
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
               VVT+NI+I+ LC  G + +A D+   M   G  P+ +++N L+ G  +  +  + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 396 ELLHRMDER 404
           E L RM  R
Sbjct: 400 EYLERMVSR 408



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 146/272 (53%), Gaps = 6/272 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   +   G  P+V+T++ LIN LCR G    A+++ E+M          C+P++
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG------CQPNS 379

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G CKE  +D+A E L +M  +   PD+VTYN+++   C      +A  +  +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK  +A +LL+ M    ++P+   Y++L+ G    G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A + F   E MG + N  +++ ++ G CK ++ + A+     M+++G KPT  +Y  
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           L  GL      + A +L +E+   G+   + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKRSSA 591



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 10/237 (4%)

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           ++  +GFCL  + +R  +    ++  G      S  + +    +N+ +   +S  S++ S
Sbjct: 8   SSAQEGFCLIQQFHRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLV--LVSAASQVES 65

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G+      ++TL  G    H        F       V  D  +    +  L + G + E
Sbjct: 66  SGLNGRAQKFDTLASG----HSNSNGNGHFSSANSSFVLEDVES-NNHLRQLVRTGELEE 120

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             +    +       DI   + LI G C+ G+ + A ++   L     + DV+TYN+MI 
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMIS 180

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             C  G+++ A  +   M    V+PD V +NT++     + +  + +E+L RM +R+
Sbjct: 181 GYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 226/433 (52%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV- 55
           EA   F  +   G +PNV  Y  LI+G    G     H ++ L +   +   +  F ++ 
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V +  +ID LCK G VD A     QM ++ + 
Sbjct: 386 TAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVA 445

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++  +NS++ G C  +   +AK  + EM++QG++P+VV F+ I+  LC  G++ +A +L
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           ++LM ++G RP+   Y TL+ G CL GR++ A +    M S+G K + ++Y+ L++GYC+
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  ++ EML  GI P VVTY+T+  GLF   +   A +L+  M   G   + W 
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GL KN  + EA +LF++L     +L+I +++ +I  L KSGR + A  LF ++ 
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ DV TY ++   L  +G +++  DLF  ME  G  P+    N L+   +   + +
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745

Query: 393 KVVELLHRMDERN 405
           +    L ++DE+N
Sbjct: 746 RAGAYLSKLDEKN 758



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 211/396 (53%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC P+V++Y+TL+ G C       AL L   M +  G     C P+ V Y T
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAT 208

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G   EG VDKA  L L+M D+ I P+VVTY +VI G C A   + A+ +F +M+D+G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+  T++ ++      GK +E  ++LE M   G++P+ + Y +L++  C  GR   A+
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F SM   G K NV  Y ILI+GY     +     L + M+  G+ P    +N +F   
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A  +F++M++ G++ D   +   ID LCK G + +A+  F  +       +I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             ++ L+ GLC   + + A E +  +    +  DVV +N ++  LC  G++ KA  L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 366 MEAKGVAPDCVAFNTLMLG-CI--RNNETSKVVELL 398
           ME  G  PD +++ TL+ G C+  R +E +K ++++
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 216/471 (45%), Gaps = 76/471 (16%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   +    +   C PNV++Y+T+ING    G    A NLF EM++         +P+ 
Sbjct: 185 LELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRG------IQPNV 238

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF--------------- 105
           V YTT+IDGLCK   VD+A+ +  QM DK + PD  TYN +I G+               
Sbjct: 239 VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298

Query: 106 ---------CYANDS-----------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                    CY   S            EA+  F  M+ +G++PNV  + +++      G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 146 MEEASQLLELMIQIGVRPNAFVYN-----------------------------------T 170
           + E   LL LM++ G+ P+  ++N                                    
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+D  C  GRV+ A   F  M + G   N+F ++ L+ G C   + E A   Y EML++G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           I+P VV +NT+   L    QV +A +L D M+R G   D  +Y T I G C  G I EA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           +    +  +  + D  +Y+ L+ G C++GR+  A+ +F  + R  +   VVTY+ ++H L
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +  +A +L+L+M   G   +   +N ++ G  +NN   +  +L   +
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL 649



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 203/406 (50%), Gaps = 11/406 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  +   G   N I  + L+ GLC       A+++   +I    E G  C PD V Y 
Sbjct: 115 ATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI---LIKRMPELG--CTPDVVSYN 169

Query: 65  TIIDGLCKEGFVDKAKELLLQMKD---KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           T++ G C E   ++A ELL  M D   ++  P+VV+Y +VI GF      ++A  LF+EM
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM 229

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           MD+G+QPNVVT++ ++D LCK   ++ A  + + MI  GV+P+   YN L+ G+   G+ 
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +   M + G K + ++Y  L+N  C N     A   +  M+ KGIKP V  Y  L
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGIL 349

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     L + M  +G++ D   +        K   I EA+ +F  ++    
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ ++  LID LCK GR+  A   F+ +    +  ++  +N +++ LC   K +KA +
Sbjct: 410 SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNN--ETSKVVELLHRMDER 404
            + +M  +G+ PD V FNT++   C +    +  ++++L+ R+  R
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 189/387 (48%), Gaps = 41/387 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+K  G  P+V+ +  LI+ LC+ G    A+  F +M+N     GV   P+  
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE----GVA--PNIF 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ +++ GLC     +KAKE   +M ++ I PDVV +N+++   C      +A+RL   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+V++++ ++   C  G+++EA++ L++M+ +G++P+ + YNTL+ G+C  GR+
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 182 N-----------------------------------RAKELFVSMESMGCKHNVFSYSIL 206
           +                                    AKEL+++M + G + N++ Y+I+
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG  KN  ++ A  L+  + SK  +  + T+N +   LF+  + E A  LF  +  +G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D + Y    + L + GY+ E  +LF  +       + R  + L+  L   G +  A  
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCAD 353
               L       +  T  ++I  L  D
Sbjct: 750 YLSKLDEKNFSLEASTTAMLISLLSRD 776



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 4/318 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD+ TY+ +I  FC           F  ++  G + N +  + ++  LC   ++ EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 151 QLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMG--CKHNVFSYSIL 206
            +L + M ++G  P+   YNTL+ GFC   R   A EL   M +S G  C  NV SY+ +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+    +++ A +L+ EM+ +GI+P VVTY T+  GL +   V+RA  +F +M   GV
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I G    G   E + +   +     + D  +Y  L++ LC +GR + A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            F S+ R  +  +V  Y I+IH     G + + HDL   M   G++PD   FN +     
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 387 RNNETSKVVELLHRMDER 404
           +     + + + ++M ++
Sbjct: 390 KKAMIDEAMHIFNKMKQQ 407



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 6/299 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   ++  G  P+VI+Y+TLI G C  G    A    + M++      V  KPD 
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS------VGLKPDE 553

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G C+ G +D A  +  +M    I P VVTY++++ G       +EAK L++ 
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q N+  +++I++ L KN  ++EA +L + +     +     +N ++     +GR
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  LF ++ S G   +VF+Y ++     +   +E    L+S M   G  P     N 
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L   L     + RA     ++     + +       I  L ++ Y   A  L    R+L
Sbjct: 734 LVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 49/341 (14%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ----------IGV 161
           ++A +LF  ++      +++ F+ ++  + +      ++   EL++           I V
Sbjct: 31  DDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 162 RPNAFVYNTLMDGFCLTGRV--------------------------------NRAKE--- 186
            P+   Y+ L+  FC  GR+                                 R +E   
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 187 -LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPTVVTYNTLF 242
            L   M  +GC  +V SY+ L+ G+C  K  E AL L   M     +   P VV+Y T+ 
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F   QV++A+ LF EM   G+  +   Y T IDGLCK   +  A  +F+ +     +
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+CLI G    G+ K    +   +    L  D  TY  +++ LC +G+  +A   
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M  KG+ P+   +  L+ G       S++ +LL+ M E
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 11/162 (6%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALE------LF-RTLR--ILK 300
           ++ A KLFD +  H   A   A+   +  + + +G      E      LF R +R   +K
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +YS LI   C+ GRL+  +  F  + +     + +  N ++  LC   ++ +A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 361 DLFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+ +  M   G  PD V++NTL+ G        + +ELLH M
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  237 bits (605), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 212/392 (54%), Gaps = 6/392 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L      P+V+TY+T++  LC +G    A+ + + M+  +      C PD + YT +I+ 
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEA 248

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C++  V  A +LL +M+D+   PDVVTYN ++ G C     +EA +   +M   G QPN
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++  
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC+ N  SY+ L++G+CK K+++ A+     M+S+G  P +VTYNT+   L +  
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +VE A ++ +++   G +     Y T IDGL K G   +A++L   +R    + D  +YS
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+ GL + G++  A + FH   R  +  + VT+N ++  LC   + D+A D  + M  +
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G  P+  ++  L+ G        + +ELL+ +
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 217/403 (53%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   L+  G  P+VITY+ +I+G C+ G    AL++ + M            PD V
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---------SVSPDVV 205

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+  LC  G + +A E+L +M  ++  PDV+TY  +I   C  +    A +L  EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VVT++V+++ +CK G+++EA + L  M   G +PN   +N ++   C TGR 
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M   G   +V +++ILIN  C+   +  A+ +  +M   G +P  ++YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G + +A+E+   L    C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ +IDGL K+G+   A +L   +    L  D +TY+ ++  L  +GK+D+A  
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F + E  G+ P+ V FN++MLG  ++ +T + ++ L  M  R
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 205/371 (55%), Gaps = 8/371 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++    C P+VITY+ LI   CR      A+ L +EM +        C PD V
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG------CTPDVV 275

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++G+CKEG +D+A + L  M      P+V+T+N ++R  C      +A++L  +M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VVTF+++++ LC+ G +  A  +LE M Q G +PN+  YN L+ GFC   ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA E    M S GC  ++ +Y+ ++   CK+ ++E A+ + +++ SKG  P ++TYNT+
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +  +A KL DEM+   +  DT  Y + + GL + G + EA++ F     +  
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +++ ++ GLCKS +   A + L   + RG    +  +Y I+I  L  +G   +A 
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK-PNETSYTILIEGLAYEGMAKEAL 574

Query: 361 DLFLDMEAKGV 371
           +L  ++  KG+
Sbjct: 575 ELLNELCNKGL 585



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 197/378 (52%), Gaps = 11/378 (2%)

Query: 29  LCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
           + RTG         E M+ +GN        PD +  TT+I G C+ G   KA ++L  ++
Sbjct: 112 MVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                PDV+TYN +I G+C A + N A  +   M    V P+VVT++ I+  LC +GK++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A ++L+ M+Q    P+   Y  L++  C    V  A +L   M   GC  +V +Y++L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CK   ++ A+   ++M S G +P V+T+N +   +    +   A KL  +M R G +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                +   I+ LC+ G +  A+++   +    C+ +  SY+ L+ G CK  ++  A E 
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +       D+VTYN M+ ALC DGK++ A ++   + +KG +P  + +NT++ G  +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 388 NNETSKVVELLHRMDERN 405
             +T K ++LL  M  ++
Sbjct: 462 AGKTGKAIKLLDEMRAKD 479



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 145/267 (54%), Gaps = 3/267 (1%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + ++ + G++EE  + LE M+  G  P+     TL+ GFC  G+  +A ++   +E  G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+++I+GYCK  EI  ALS+   M    + P VVTYNT+   L +  ++++A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D M +     D   Y   I+  C++  +  A++L   +R   C  D+ +Y+ L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL  A +  + +P      +V+T+NI++ ++C+ G+   A  L  DM  KG +P  V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    R     + +++L +M +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQ 372



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V  N+ +R      +  E  +    M+  G  P+++  + ++   C+ GK  +A+++LE+
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           +   G  P+   YN ++ G+C  G +N A  +   ++ M    +V +Y+ ++   C + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+ +   ML +   P V+TY  L         V  A KL DEM+  G   D   Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++G+CK G + EA++    +    C+ ++ +++ ++  +C +GR   A +L   + R  
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
               VVT+NI+I+ LC  G + +A D+   M   G  P+ +++N L+ G  +  +  + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 396 ELLHRMDER 404
           E L RM  R
Sbjct: 400 EYLERMVSR 408



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 146/272 (53%), Gaps = 6/272 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   +   G  P+V+T++ LIN LCR G    A+++ E+M          C+P++
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNS 379

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G CKE  +D+A E L +M  +   PD+VTYN+++   C      +A  +  +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK  +A +LL+ M    ++P+   Y++L+ G    G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A + F   E MG + N  +++ ++ G CK+++ + A+     M+++G KP   +Y  
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           L  GL      + A +L +E+   G+   + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 32/248 (12%)

Query: 169 NTLMDGFCLTGRVNR----AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           ++  +GFCL  + +R      +L VS  + G      S  I +    +N+ +   +S  S
Sbjct: 8   SSAQEGFCLIQQFHREYKRGNKLDVSCRTSGS----ISSKIPLGSRKRNRLV--LVSAAS 61

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIH------QVERAFKLFD-EMQRHGVAADTWAYRTFI 277
           ++ S G+      + TL  G    +       V  +F L D E   H            +
Sbjct: 62  KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNH------------L 109

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             + + G + E  +    +       DI   + LI G C+ G+ + A ++   L     +
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV+TYN+MI   C  G+++ A  +   M    V+PD V +NT++     + +  + +E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 398 LHRMDERN 405
           L RM +R+
Sbjct: 227 LDRMLQRD 234


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 220/405 (54%), Gaps = 26/405 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+V+T+++L+ GLC       A  LFE M          C+P+ + Y+T++DGLCK 
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKA 192

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A  L  +M +K+  PD+V Y S + G C AN   EA     +M+ +G + + V F
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252

Query: 134 SVIM-----------------DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           S ++                 + LC++G ++EA +  E MI     P+A ++NTL+   C
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312

Query: 177 LTGRVNRAKELFVSMESMG---CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            + R+     LF  M+SM    C  N+ +Y+I+++  CK K+++ A  L +EM + G+ P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVTY+ L  GL ++ +++RA  L +EM + GV  D++   + ++ L K G +  AL   
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            T++      D+ +Y+ L+DGLCK+GR+  A      +       DV +Y I+I ALC  
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           G+   AH +F +M  +GV PD V +++L+ G  RN      +ELL
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 203/416 (48%), Gaps = 27/416 (6%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +++  G  P+  TYS ++ GLC+ G     L+  +E++    E GV  K + + Y+ +
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGE----LDKAKELLGQLRESGV--KLNVITYSVV 114

Query: 67  IDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IDG CK   VD A E+   M       PDVVT+NS+++G C     +EA  LF  M   G
Sbjct: 115 IDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +PNV+++S ++D LCK G+++EA +L E M++    P+   Y + + G C   RV  A 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCK--------NKEIEG---------ALSLYSEMLS 228
           +    M + G K +  ++S +I   CK        N+ IE          A   + EM+S
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGY 285
           +   P+   +NTL   + +  ++     LF  M+         +   Y   +D LCK   
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA EL   +       D+ +YS L+DGLCK G+L  A +L   + +  +  D  T   
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +++AL   GK+D A      M+A+G  PD V +NTL+ G  +     + +  L +M
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 17/378 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           EA     K+   G + + + +ST+I  LC+ GH   A N   E +  +G     CK    
Sbjct: 232 EACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEE 291

Query: 58  -------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCY 107
                  P A ++ T+I  +CK   +     L  +MK        P++ TYN ++   C 
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A   +EA+ L  EM + G+ P+VVT+S ++D LCK GK++ A  LLE M + GV P++F 
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             ++++     G+V+ A     +M++ G   ++ +Y+ L++G CK   I+ A++  ++M+
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           +    P V +Y  +   L    Q   A  +F EM + GV  DT  Y + +DGL +NG   
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            ALEL +T     C+ D   +  ++DGLCK+G+ + A E+   +      AD  TY  ++
Sbjct: 532 LALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588

Query: 348 HALCADGKMDKAHDLFLD 365
             L   GK+DKA  L  D
Sbjct: 589 SGLRKLGKVDKARQLVDD 606



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 175/368 (47%), Gaps = 56/368 (15%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   +D L K      A E   QM+ +   PD  TY+ V+RG C A + ++AK L  ++ 
Sbjct: 41  YNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLR 100

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRV 181
           + GV+ NV+T+SV++D  CK  ++++A ++ + M    G  P+   +N+L+ G C   R+
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERM 160

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M   GC+ NV SYS L++G CK   ++ A  L+ EM+ K   P +V Y + 
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA------------ 289
             GL + ++V  A     +M   G  AD  A+ T I  LCK G+  EA            
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 290 --------------------LELFRTL-----------------------RILKCELDIR 306
                                ELF TL                       +   C  ++ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ ++D LCK+ +L  A EL + +    L  DVVTY+ ++  LC  GK+D+A DL  +M
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 367 EAKGVAPD 374
             +GV PD
Sbjct: 401 SKEGVFPD 408



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 56/373 (15%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           + K     V TYN  +     AN    A   F +M  +G  P+  T+S+++  LCK G++
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCKHNVFSYSI 205
           ++A +LL  + + GV+ N   Y+ ++DG C   RV+ A E+F +M S  GC  +V +++ 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C  + +  A  L+  M   G +P V++Y+TL  GL +  +++ A +L++EM    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D  AY +F+ GLCK   + EA +  R +     + D  ++S +I  LCK G  + A 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 326 --------------------------------ELFHS----------LPRGVLI------ 337
                                           ELF++          LP GVL+      
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 338 -------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                   ++ TYNIM+  LC   ++D+A +L  +M   G++PD V ++ L+ G  +  +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 391 TSKVVELLHRMDE 403
             +  +LL  M +
Sbjct: 390 LDRACDLLEEMSK 402



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 1/178 (0%)

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG + +V TYN     L + +  + A++ F +MQR G   D + Y   + GLCK G + +
Sbjct: 32  KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMI 347
           A EL   LR    +L++ +YS +IDG CK+ R+  A E+F ++  G   + DVVT+N ++
Sbjct: 92  AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLL 151

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             LC+  +M +A  LF  M   G  P+ ++++TL+ G  +     +   L   M E++
Sbjct: 152 KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 210/405 (51%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKL--KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +A AL   +  +A GC PN +TY+ +INGL R G    A  L + M        +  K  
Sbjct: 247 QAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-------RLSKKAS 299

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A  Y  +I GL    FV+KA  LLL+M+++ I P VVTYN++I G     ++  A+  F 
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G+ P+++T++ +++  CK G +++A  L   + + G+ P    YN L+DG+C  G
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  A+ L   M    C  +V +Y+IL+NG C  + +      + EMLSKG++P    YN
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T       I  +  AF+L +EM   G+++DT  Y   IDGLCK G + +A  L+  +   
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD  +Y+CLI   C+ GRL  A  +F  +    L   VVTY I IH  C  G +  A
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  F  M  +GV P+ V +N LM    R   T    +  H M ER
Sbjct: 600 YGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLER 644



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 192/383 (50%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  +++  G  P V+TY+TLI+GL +TG+   A   F+EM    G       PD +
Sbjct: 318 KAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM-RAKGLL-----PDLI 371

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+G CK G + +A  L   +K   + P V+TYN +I G+C   D   A+RL  EM
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++   P+V T++++M+  C    +       + M+  G+ P+ F YNT +      G +
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAI 491

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   +  +Y++LI+G CK   ++ A  L+ +M++ G++   VTY  L
Sbjct: 492 TNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  ++  A  +FD M   G++     Y  FI   C+ G +  A   FR +     
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +  +Y+ L+  LC+ GR + A++ FH +    L+ +  TY ++I   C +G    A  
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L+ +M  KG+ PD    N L  G
Sbjct: 672 LYCEMHQKGIHPDHCTHNALFKG 694



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 165/311 (53%), Gaps = 8/311 (2%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M    + P V   N V+R    A   ++ + ++ +M+  GV+P++ T++ ++D  CK G
Sbjct: 184 EMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAG 243

Query: 145 KMEEASQLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           +M++A  LL+ M     G  PN   YN +++G    G + +A +L V +  +  K + F+
Sbjct: 244 RMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLSKKASAFT 302

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI G      +E A +L  EM ++GI PTVVTYNTL  GLF+    E A   FDEM+
Sbjct: 303 YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   Y + I+G CK G + +AL LF  L+       + +Y+ LIDG C+ G L+
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLE 422

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT-- 380
            A  L   +     + DV TY I+++  C    +      F +M +KG+ PDC A+NT  
Sbjct: 423 GARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRI 482

Query: 381 ---LMLGCIRN 388
              L +G I N
Sbjct: 483 SAELTIGAITN 493



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 172/385 (44%), Gaps = 72/385 (18%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--IEMMDQGVQPNVVTFS 134
           D  + +   M    + P + TYN+++  FC A   ++A  L   +E    G  PN VT++
Sbjct: 211 DDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYN 270

Query: 135 VIMDELCKNGKMEEASQLLELMI----------------------------------QIG 160
           V+++ L + G++E+A+QL+++M                                     G
Sbjct: 271 VVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEG 330

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P    YNTL+DG   TG    A+  F  M + G   ++ +Y+ LINGYCK   ++ AL
Sbjct: 331 IVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQAL 390

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL----------------------- 257
            L+ ++   G+ PTV+TYN L  G   +  +E A +L                       
Sbjct: 391 CLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGS 450

Query: 258 ------------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                       FDEM   G+  D +AY T I      G I  A +L   + +     D 
Sbjct: 451 CMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDT 510

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LIDGLCK+G LK A+ L+  +    L  D VTY  +IHA C  G++ +A ++F  
Sbjct: 511 VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570

Query: 366 MEAKGVAPDCVAFNTLMLG-CIRNN 389
           M A G++P  V +   +   C R N
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGN 595



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++ + G EP+   Y+T I+     G    A  L EEM+            D V Y  
Sbjct: 462 FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG------ISSDTVTYNV 515

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDGLCK G +  A  L ++M    +  D VTY  +I   C      EAK +F  M+  G
Sbjct: 516 LIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+VVT+++ +   C+ G +  A      M++ GV PN   YN LM   C  GR   A 
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAY 635

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           + F  M   G   N ++Y++LI+G CK      A+ LY EM  KGI P   T+N LF G 
Sbjct: 636 QHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695

Query: 246 FEIH 249
            E H
Sbjct: 696 GEGH 699



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 137/301 (45%), Gaps = 40/301 (13%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A+ S +    F EM   GV P V   + ++  L    + ++   +   M+Q+GV P+ F 
Sbjct: 172 ASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFT 231

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMES--MGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           YNTL+D FC  GR+++A  L   ME+   GC  N  +Y+++ING  +  E+E A  L   
Sbjct: 232 YNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDI 291

Query: 226 M-LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           M LSK  K +  TYN L  GL     VE+A  L  EM+  G+                  
Sbjct: 292 MRLSK--KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPT--------------- 334

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
                               + +Y+ LIDGL K+G  + A   F  +    L+ D++TYN
Sbjct: 335 --------------------VVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYN 374

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I+  C  G + +A  LF D++  G+ P  + +N L+ G  R  +      L   M E 
Sbjct: 375 SLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEE 434

Query: 405 N 405
           +
Sbjct: 435 D 435


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 136/431 (31%), Positives = 223/431 (51%), Gaps = 30/431 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  +F  +   G  P++++YS L++G    G      NLF  M               I
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           + + + G++               +P+ V Y+T+I   C+ G +  A E   QM    I 
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+   Y+S+I GFC   D  +AK    EMM +G+ +PN+V FS I+  LC  G++ +A  
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +  L+I IG RP    +N+L+DG+CL G++ +A  +  +M S+G + +V + + L++GYC
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+ +I+  L L+ EML K +KPT VTYN +  GL    +   A K+F EM   G A D  
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y+  + GLC+N    EA+ LF  L  + C+ DI   + +I+ L K  R + A +LF ++
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +V TY +MI  L  +G +++A  +F  ME  G AP     N ++   ++  + 
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 774

Query: 392 SKVVELLHRMD 402
            K    + ++D
Sbjct: 775 VKAGYYMSKVD 785



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 42/423 (9%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V++++T+I+G  + G    A NLF EM+    + GVV  PD   Y +I+D LCK  
Sbjct: 228 CSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV----QKGVV--PDVGTYNSIVDALCKAR 281

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+ +L QM DK + PD VTYN++I G+  +    E+ ++F +M  +G+ P+ VTFS
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
             M  LCK+G+ ++A ++ + M   G  P+   Y+ L+ G+   GR      LF SM   
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   N    +ILI+ + K   ++ A+ +++EM  +G++P VVTY+TL      + ++  A
Sbjct: 402 GIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADA 461

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------------------ 296
            + F +M   G+  +T  Y + I G C +G +V+A E    +                  
Sbjct: 462 MEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIH 521

Query: 297 ------RILKCE------------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
                 R++  +              I +++ LIDG C  G+++ A+ +  ++    +  
Sbjct: 522 SLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 581

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DVVT N ++   C  GK+D    LF +M  K V P  V +N ++ G +R   TS   ++ 
Sbjct: 582 DVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMF 641

Query: 399 HRM 401
           H M
Sbjct: 642 HEM 644



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 193/380 (50%), Gaps = 5/380 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++    C P+ I+Y+T+I  LC    +  AL++ + M    G     C PD V + T
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNT 237

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  K+G V KA  L  +M  K + PDV TYNS++   C A   ++A+ +  +M+D+G
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+ VT++ I+     +G  +E++++   M   G+ P+   +++ M   C  GR   A+
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F  M + G   ++ SYSIL++GY          +L+  M  KGI       N L    
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A  +F EMQ  GV  +   Y T I   C+ G + +A+E F  +  +  E + 
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             Y  LI G C  G L  A E     + +G+   ++V ++ +IH+LC +G++  A D+F 
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            +   G  P  V FN+L+ G
Sbjct: 538 LVIHIGDRPTIVTFNSLIDG 557



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 212/446 (47%), Gaps = 65/446 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---------- 51
           +A  LF ++   G  P+V TY+++++ LC+      A  +  +M++   E          
Sbjct: 250 KACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309

Query: 52  FGVVCK-------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  C                    PD V +++ +  LCK G    A+E+   M  K   
Sbjct: 310 HGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM 369

Query: 93  PDVVTYNSVIRGFC----YANDSN-------------------------------EAKRL 117
           PD+V+Y+ ++ G+     +A+ +N                               EA  +
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLV 429

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM  QGV+PNVVT+S ++   C+ G++ +A +    MI IG+ PN  VY++L+ GFC+
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489

Query: 178 TGRVNRAKELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            G + +AKE    M S G  + N+  +S +I+  C    +  A  +++ ++  G +PT+V
Sbjct: 490 HGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIV 549

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+N+L  G   + ++E+AF + D M   G+  D     T + G CK+G I + L LFR +
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
              K +    +Y+ ++DGL ++GR   A ++FH +       D+ TY I++  LC +   
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLT 669

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           D+A  LF  + A     D    NT++
Sbjct: 670 DEAITLFHKLGAMDCKFDITILNTMI 695



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 183/390 (46%), Gaps = 42/390 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +FT+++  G  PNV+TYSTLI+  CR G    A+  F +MI+      +  +P+  
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS------IGIEPNTA 478

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNIN----------------------------- 92
           +Y ++I G C  G + KAKE + +M  K ++                             
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538

Query: 93  -------PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                  P +VT+NS+I G+C      +A  +   M+  G++P+VVT + ++   CK+GK
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++   L   M+   V+P    YN ++DG    GR + AK++F  M   G   ++ +Y I
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C+N   + A++L+ ++ +   K  +   NT+   L+++ + E A  LF  +   G
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y   I  L K G + EA  +F ++    C    R  + +I  L + G +  A 
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAG 778

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                +   ++  +  T ++++    + GK
Sbjct: 779 YYMSKVDGTIISLEASTTSLLMSLFSSKGK 808



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           V P  V T+ ++MD  C+  + +     +  +++ G++       T +   C   R + A
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 185 KELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PTVVTYNTL 241
            ++ +  M  + C  +  SY+ +I   C +   + AL +   M  +G +  P VV++NT+
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  +V +A  LF+EM + GV  D   Y + +D LCK   + +A  + R +     
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ +I G   SG  K + ++F  +    LI D VT++  + +LC  G+   A +
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M  KG  PD V+++ L+ G       + +  L H M ++
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F  +   G  P ++T+++LI+G C  G    A  + + M++      V  +PD 
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS------VGIEPDV 583

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V   T++ G CK G +D    L  +M  K + P  VTYN V+ G   A  ++ AK++F E
Sbjct: 584 VTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHE 643

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G   ++ T+ +++  LC+N   +EA  L   +  +  + +  + NT+++      R
Sbjct: 644 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRR 703

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF ++ + G   NV +Y ++I    K   +E A +++S M   G  P+    N 
Sbjct: 704 REEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 763

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + +A
Sbjct: 764 IIRMLLQKGDIVKA 777



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 56/207 (27%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEALELFRTLRILKCE 302
            + A  LFDE+ R G      +   F+  L        C NG  +  L LF   RI + E
Sbjct: 58  TDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPAL-VLALFN--RICREE 114

Query: 303 -------LDIRSYSCLIDGLCKSGRLKIAWE----------------------------- 326
                  L +R+Y  L+D  C++ R  +                                
Sbjct: 115 AGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKR 174

Query: 327 -------LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VAPDCVA 377
                  L H +     + D ++YN +I +LC D +  +A D+   M  +G   +PD V+
Sbjct: 175 TDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVS 234

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           FNT++ G  +  E SK   L + M ++
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQK 261


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 220/405 (54%), Gaps = 26/405 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+V+T+++L+ GLC       A  LFE M          C+P+ + Y+T++DGLCK 
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKA 192

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A  L  +M +K+  PD+V Y S + G C AN   EA     +M+ +G + + V F
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252

Query: 134 SVIM-----------------DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           S ++                 + LC++G ++EA +  E MI     P+A ++NTL+   C
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312

Query: 177 LTGRVNRAKELFVSMESMG---CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            + R+     LF  M+SM    C  N+ +Y+I+++  CK K+++ A  L +EM + G+ P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVTY+ L  GL ++ +++RA  L +EM + GV  D++   + ++ L K G +  AL   
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            T++      D+ +Y+ L+DGLCK+GR+  A      +       DV +Y I+I ALC  
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           G+   AH +F +M  +GV PD V +++L+ G  RN      +ELL
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 203/416 (48%), Gaps = 27/416 (6%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +++  G  P+  TYS ++ GLC+ G     L+  +E++    E GV  K + + Y+ +
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGE----LDKAKELLGQLRESGV--KLNVITYSVV 114

Query: 67  IDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IDG CK   VD A E+   M       PDVVT+NS+++G C     +EA  LF  M   G
Sbjct: 115 IDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +PNV+++S ++D LCK G+++EA +L E M++    P+   Y + + G C   RV  A 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCK--------NKEIEG---------ALSLYSEMLS 228
           +    M + G K +  ++S +I   CK        N+ IE          A   + EM+S
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGY 285
           +   P+   +NTL   + +  ++     LF  M+         +   Y   +D LCK   
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA EL   +       D+ +YS L+DGLCK G+L  A +L   + +  +  D  T   
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +++AL   GK+D A      M+A+G  PD V +NTL+ G  +     + +  L +M
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 17/378 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           EA     K+   G + + + +ST+I  LC+ GH   A N   E +  +G     CK    
Sbjct: 232 EACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEE 291

Query: 58  -------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCY 107
                  P A ++ T+I  +CK   +     L  +MK        P++ TYN ++   C 
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A   +EA+ L  EM + G+ P+VVT+S ++D LCK GK++ A  LLE M + GV P++F 
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             ++++     G+V+ A     +M++ G   ++ +Y+ L++G CK   I+ A++  ++M+
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           +    P V +Y  +   L    Q   A  +F EM + GV  DT  Y + +DGL +NG   
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            ALEL +T     C+ D   +  ++DGLCK+G+ + A E+   +      AD  TY  ++
Sbjct: 532 LALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588

Query: 348 HALCADGKMDKAHDLFLD 365
             L   GK+DKA  L  D
Sbjct: 589 RGLRKLGKVDKARQLVDD 606



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 175/368 (47%), Gaps = 56/368 (15%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   +D L K      A E   QM+ +   PD  TY+ V+RG C A + ++AK L  ++ 
Sbjct: 41  YNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLR 100

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM-IQIGVRPNAFVYNTLMDGFCLTGRV 181
           + GV+ NV+T+SV++D  CK  ++++A ++ + M    G  P+   +N+L+ G C   R+
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERM 160

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M   GC+ NV SYS L++G CK   ++ A  L+ EM+ K   P +V Y + 
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA------------ 289
             GL + ++V  A     +M   G  AD  A+ T I  LCK G+  EA            
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280

Query: 290 --------------------LELFRTL-----------------------RILKCELDIR 306
                                ELF TL                       +   C  ++ 
Sbjct: 281 MLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ ++D LCK+ +L  A EL + +    L  DVVTY+ ++  LC  GK+D+A DL  +M
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 367 EAKGVAPD 374
             +GV PD
Sbjct: 401 SKEGVFPD 408



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 176/373 (47%), Gaps = 56/373 (15%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           + K     V TYN  +     AN    A   F +M  +G  P+  T+S+++  LCK G++
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCKHNVFSYSI 205
           ++A +LL  + + GV+ N   Y+ ++DG C   RV+ A E+F +M +  GC  +V +++ 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C  + +  A  L+  M   G +P V++Y+TL  GL +  +++ A +L++EM    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D  AY +F+ GLCK   + EA +  R +     + D  ++S +I  LCK G  + A 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 326 --------------------------------ELFHS----------LPRGVLI------ 337
                                           ELF++          LP GVL+      
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329

Query: 338 -------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                   ++ TYNIM+  LC   ++D+A +L  +M   G++PD V ++ L+ G  +  +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389

Query: 391 TSKVVELLHRMDE 403
             +  +LL  M +
Sbjct: 390 LDRACDLLEEMSK 402



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 1/179 (0%)

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG + +V TYN     L + +  + A++ F +MQR G   D + Y   + GLCK G + 
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIM 346
           +A EL   LR    +L++ +YS +IDG CK+ R+  A E+F ++   G  + DVVT+N +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  LC+  +M +A  LF  M   G  P+ ++++TL+ G  +     +   L   M E++
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 218/402 (54%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GCE N ++Y  +I+G  +    I A +LF+EM+        +C PD + 
Sbjct: 165 ALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG-----IC-PDILT 218

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I  LCK+G V ++++L  ++  + + P++ T+N  I+G C     +EA RL   ++
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+V++++ ++   CK+ K+ EA   L  M+  GV PN F YNT+++GFC  G + 
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++       G   + F+YS LING C + ++  A++++ E + KG K +++ YNTL 
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   V +A +L  +M  HG + D W Y   ++GLCK G + +A  +        C 
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +++ LIDG CK   +  A E+  ++    +  DV+TYN +++ LC   K+D   D 
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  KG  P+ + +N L+    ++ + S+ +EL   M  R
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 219/398 (55%), Gaps = 6/398 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G  P+++T++ LI+ LC+ G+   +  LF +++        VC P+ 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG-----VC-PNL 251

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +   I GLC++G +D+A  LL  +  + + PDV++YN++I GFC  +   EA+    +
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ GV+PN  T++ I++  CK G M+ A ++L   +  G  P+ F Y++L++G C  G 
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +NRA  +F      G KH++  Y+ L+ G  K   +  AL L  +M+  G  P + TYN 
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL ++  +  A  + ++    G   D + + T IDG CK   + +A+E+  T+    
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ L++GLCK+ +L    + F ++       +++TYNI+I + C D K+ +A 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +LF +M+ +G+ PD V   TL+ G   N E  K  EL 
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 200/408 (49%), Gaps = 42/408 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L   + + G  P+VI+Y+TLI G C+    + A     +M+N   E      P+  
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEF 322

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII+G CK G +  A ++L     K   PD  TY+S+I G C   D N A  +F E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++G + +++ ++ ++  L K G + +A QL++ M++ G  P+ + YN +++G C  G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +     + GC  ++F+++ LI+GYCK + ++ A+ +   MLS GI P V+TYNTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++     F  M   G   +   Y   I+  CK+  + EA+ELF+ ++    
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF--------------------------------- 328
             DI +   LI GLC +G L  A+ELF                                 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622

Query: 329 ---HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              H +       D  TY +MI + C  G +D AH   L+  +KG+ P
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 211/401 (52%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  LF+K+   G  PN+ T++  I GLCR G    A  L E +++          PD +
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG------LTPDVI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK   + +A+  L +M +  + P+  TYN++I GFC A     A ++  + 
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G  P+  T+S +++ LC +G M  A  +    ++ G + +  +YNTL+ G    G V
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M   GC  ++++Y++++NG CK   +  A  + ++ ++KG  P + T+NTL
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +++A ++ D M  HG+  D   Y T ++GLCK   +   ++ F+ +    C
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ LI+  CK  ++  A ELF  +    L  D+VT   +I  LC++G++DKA++
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587

Query: 362 LFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF+ +E +   +     FN ++         S   +L H+M
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++  + CEP+V +Y+ ++N L   G+   A  ++  M     + G+   PD  
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM----KDIGIY--PDVY 147

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T  +   C  G    A  LL  M  +    + V+Y +VI GF   N   EA  LF EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P+++TF+ ++  LCK G ++E+ +L   +++ GV PN F +N  + G C  G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L  S+ S G   +V SY+ LI G+CK+ ++  A     +M++ G++P   TYNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A K+  +    G   D + Y + I+GLC +G +  A+ +F        
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I  Y+ L+ GL K G +  A +L   +       D+ TYN++++ LC  G +  A+ 
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  D  AKG  PD   FNTL+ G  +     K +E+L  M
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIE 120
           Y  +I+ L   G  +  +++L +M+ KN++  ++   Y  ++R +       EA  +F  
Sbjct: 43  YKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     +P+V +++ IM+ L + G   +A ++   M  IG+ P+ + +   M  FC+TGR
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYN 239
              A  L  +M   GC+ N  SY  +I+G+ K N +IE A  L+ EML +GI P ++T+N
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFN 220

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L +   V+ + KLF ++ + GV  + + +  FI GLC+ G I EA  L  ++   
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ SY+ LI G CK  +L  A    H +    +  +  TYN +I+  C  G M  A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  D   KG  PD   +++L+ G   + + ++ + + +   E+
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 42/305 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   GC P++ TY+ ++NGLC+ G    A  +  + I         C PD 
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG------CIPDI 461

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + T+IDG CK+  +DKA E+L  M    I PDV+TYN+++ G C A   +     F  
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN++T++++++  CK+ K+ EA +L + M   G+ P+     TL+ G C  G 
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 181 VNRAKELFVSMES---------------------------------MG---CKHNVFSYS 204
           +++A ELFV++E                                  MG   C  + ++Y 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ++I+ YCK   I+ A +   E +SKG+ P+  T   +   L   H++  A  + + M ++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 265 GVAAD 269
           G+  +
Sbjct: 702 GIVPE 706



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 152/341 (44%), Gaps = 50/341 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +     A GC P++ T++TLI+G C+  +   A+ + + M++     G+   PD +
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS----HGIT--PDVI 497

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK   +D   +    M +K   P+++TYN +I  FC     +EA  LF EM
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL---------------------------- 153
             +G+ P++VT   ++  LC NG++++A +L                             
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLN 617

Query: 154 -----ELMIQIG---VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                +L  ++G     P+ + Y  ++D +C TG ++ A    +   S G   +  +   
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE-RAFKLFDEMQRH 264
           ++N  C    +  A+ + + M+  GI P  V        +FE  + E  A K+  E    
Sbjct: 678 VLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN------SIFEADKKEVAAPKIVVEYLLK 731

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                 ++Y    DG+ +N  +VEA  L   +   K +L +
Sbjct: 732 KSHITYYSYELLYDGI-RNRKVVEARPLLYKVAYQKAKLQL 771


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 220/412 (53%), Gaps = 15/412 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ +++  G + +V TY+  I   C+T     AL L   M     E G  C  +AV
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNM----PELG--CDSNAV 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G  D A+EL  +M  + + PDVV +N ++   C      E++RL  ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME---------EASQLLELMIQIGVRPNAFVYNTLM 172
           + +GV PN+ TF++ +  LC+ G ++         EA + L  M+  G  P+   YN+++
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DG+C  G V  A  +       G K + F+Y  LING+CK+ + + A++++ + L KG++
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P++V YNTL  GL +   +  A +L +EM  +G   + W Y   I+GLCK G + +A  L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
                   C  DI +Y+ LIDG CK  +L  A E+ + +    +  DV+TYN +++ LC 
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            GK ++  ++F  ME KG  P+ + +N ++    +  + ++ V+LL  M  +
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 209/414 (50%), Gaps = 17/414 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG---------HTIVALNLFEEMINGNGEF 52
           E+  L  K+   G  PN+ T++  + GLCR G           + A     +M+NG  E 
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFE- 292

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
                PD + Y +IIDG CK+G V  A  +L     K   PD  TY S+I GFC   D +
Sbjct: 293 -----PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPD 347

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            A  +F + + +G++P++V ++ ++  L + G +  A QL+  M + G  PN + YN ++
Sbjct: 348 RAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVI 407

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G C  G V+ A  L     + GC  ++F+Y+ LI+GYCK  +++ A  + + M S+G+ 
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TYNTL  GL +  + E   ++F  M+  G   +   Y   +D LCK   + EA++L
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV-TYNIMIHALC 351
              ++    + D+ S+  L  G CK G +  A++LF  + +   +     TYNI++ A  
Sbjct: 528 LGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDER 404
               M+ A  LF  M+  G  PD   +  ++ G C   N T     LL  M++R
Sbjct: 588 EQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 219/411 (53%), Gaps = 15/411 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GC+ N + Y T++ GL  +G    A  LF+EM+        +C PD V 
Sbjct: 165 ALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLA-----RCLC-PDVVA 218

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN---------E 113
           +  ++  LCK+G V +++ LL ++  + + P++ T+N  ++G C     +         E
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+    +M++ G +P+ +T++ I+D  CK G +++A+++L+  +  G +P+ F Y +L++
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  G  +RA  +F      G + ++  Y+ LI G  +   I  AL L +EM   G  P
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            + TYN +  GL ++  V  A  L D+    G   D + Y T IDG CK   +  A E+ 
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +       D+ +Y+ L++GLCK+G+ +   E+F ++       +++TYNI++ +LC  
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            K+++A DL  +M++KG+ PD V+F TL  G  +  +     +L  RM+++
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 198/364 (54%), Gaps = 7/364 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+  TY +LING C+ G    A+ +F++ +      G   +P  V+Y T+I GL ++
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL------GKGLRPSIVLYNTLIKGLSQQ 378

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +  A +L+ +M +    P++ TYN VI G C     ++A  L  + + +G  P++ T+
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTY 438

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK  K++ A++++  M   G+ P+   YNTL++G C  G+     E+F +ME 
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE 498

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N+ +Y+I+++  CK K++  A+ L  EM SKG+KP VV++ TLF G  +I  ++ 
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 254 AFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A++LF  M++ + V   T  Y   +    +   +  A++LF  ++   C+ D  +Y  +I
Sbjct: 559 AYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVI 618

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK G +   ++          I  + T+  +++ LC   K+ +A  +   M  KG+ 
Sbjct: 619 DGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIV 678

Query: 373 PDCV 376
           P+ V
Sbjct: 679 PETV 682



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 158/292 (54%), Gaps = 9/292 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  ++   GC PN+ TY+ +INGLC+ G    A +L ++ I         C PD 
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG------CPPDI 435

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+IDG CK+  +D A E++ +M  + + PDV+TYN+++ G C A  S E   +F  
Sbjct: 436 FTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKA 495

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PN++T+++I+D LCK  K+ EA  LL  M   G++P+   + TL  GFC  G 
Sbjct: 496 MEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD 555

Query: 181 VNRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ A +LF  ME      H   +Y+I+++ + +   +  A+ L+S M + G  P   TY 
Sbjct: 556 IDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYR 615

Query: 240 TLFIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            +  G  ++  + + +K L + M++  + + T   R  ++ LC    + EA+
Sbjct: 616 VVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV-LNCLCVKDKVHEAV 666



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 184/418 (44%), Gaps = 50/418 (11%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G    A++ FE M   N      C P    +  I++ L + G+ ++A ++ ++M+D+ 
Sbjct: 88  RKGKVQEAVDTFERMDFYN------CDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +  DV TY   I+ FC       A RL   M + G   N V +  ++  L  +G+ + A 
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL---- 206
           +L + M+   + P+   +N L+   C  G V  ++ L   +   G   N+F+++I     
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261

Query: 207 ----------------------------------------INGYCKNKEIEGALSLYSEM 226
                                                   I+GYCK   ++ A  +  + 
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + KG KP   TY +L  G  +    +RA  +F +    G+      Y T I GL + G I
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
           + AL+L   +    C  +I +Y+ +I+GLCK G +  A  L           D+ TYN +
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTL 441

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I   C   K+D A ++   M ++G+ PD + +NTL+ G  +  ++ +V+E+   M+E+
Sbjct: 442 IDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK 499



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 166/358 (46%), Gaps = 12/358 (3%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEA 114
           K  A  Y  I+  L   G  ++ ++LL +M++ N+N  ++   Y   ++ +       EA
Sbjct: 37  KHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE-NVNNALLEGAYIEAMKNYGRKGKVQEA 95

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
              F  M      P+V + + IM+ L + G   +A ++   M   GV+ + + Y   +  
Sbjct: 96  VDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKS 155

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           FC T R   A  L  +M  +GC  N  +Y  ++ G   + E + A  L+ EML++ + P 
Sbjct: 156 FCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPD 215

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC---------KNGY 285
           VV +N L   L +   V  + +L  ++ + GV  + + +  F+ GLC         +N  
Sbjct: 216 VVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSR 275

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +VEA E  R +     E D  +Y+ +IDG CK G ++ A  +           D  TY  
Sbjct: 276 VVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCS 335

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I+  C DG  D+A  +F D   KG+ P  V +NTL+ G  +       ++L++ M E
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 9/241 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ + G  P+VITY+TL+NGLC+ G +   + +F+ M     E G  C P+ + 
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM----EEKG--CTPNIIT 507

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  I+D LCK   V++A +LL +MK K + PDVV++ ++  GFC   D + A +LF  M 
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567

Query: 123 DQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            Q  V     T+++I+    +   M  A +L  +M   G  P+ + Y  ++DGFC  G +
Sbjct: 568 KQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNI 627

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +  +  +         ++ ++  ++N  C   ++  A+ +   ML KGI P  V  NT+
Sbjct: 628 TQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTI 685

Query: 242 F 242
           F
Sbjct: 686 F 686



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 43/288 (14%)

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +    T+  I+ +L  +G+ EE  +LL  M     R N  V N L++G        
Sbjct: 33  EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-----REN--VNNALLEG-------- 77

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
                              +Y   +  Y +  +++ A+  +  M      P+V ++N + 
Sbjct: 78  -------------------AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIM 118

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L E     +A K++  M+  GV +D + Y   I   CK      AL L R +  L C+
Sbjct: 119 NILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCD 178

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y  ++ GL  SG    A ELF  +    L  DVV +N ++H LC  G + ++  L
Sbjct: 179 SNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERL 238

Query: 363 FLDMEAKGVAPDCVAFNTLMLG---------CIRNNETSKVVELLHRM 401
              +  +GV P+   FN  + G          +RN+   +  E L +M
Sbjct: 239 LGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM 286



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 42/198 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +F  ++  GC PN+ITY+ +++ LC+      A++L  EM +         KPD V
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG------LKPDVV 541

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM----------------------------------- 86
            + T+  G CK G +D A +L  +M                                   
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601

Query: 87  -KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
            K+   +PD  TY  VI GFC   +  +  +  +E M++   P++ TF  +++ LC   K
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDK 661

Query: 146 MEEASQLLELMIQIGVRP 163
           + EA  ++ LM+Q G+ P
Sbjct: 662 VHEAVGIIHLMLQKGIVP 679


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 209/393 (53%), Gaps = 12/393 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFE---EMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           C PN++T++TLI  LCR G       LFE   E++    E G  C PD  +Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           KEG ++ A E+L +M    + P+VV YN+V++G C A    EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF++++D  C+NG ++   +LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +       +   YS +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M + G 
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            P+   +  L+ G        +  ELL  +  R
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 206/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  KL  FGCE ++++Y+ ++ GLC          L +EM+       V C P+ V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E+L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + +EA +LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP  V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +  C
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +++   +  D V +N ++    +  ET + ++    M
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   GC P    Y  ++   CR+G    ++ + E M +  G     C  D  
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKG-----CTLDTG 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C++G VD+A  LL ++       D+V+YN+V++G C A    + + L  EM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M + G  P+  +Y T++DG C  G +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ ++ G C  +  + A  L SEM  K      VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA----NEILNRMPSYGL--KPNVVCYNT 326

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC      +A+ELL +M  K+   D VT+N ++  FC     +    L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C  GR   A+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + E A +L + M   G++ +T  Y +    L + G + + +++F  ++      D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK      A + F  +     + +  TY ++I  L ++G   +A +L  +
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 366 MEAKG 370
           + ++G
Sbjct: 627 LCSRG 631



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 7/335 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G +PNV+ Y+T++ GLC       A  L  EM   +      C  D V 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD------CPLDDVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++D  C+ G VD+  ELL QM      PDV+TY +VI GFC     +EA  L   M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN V++++++  LC  G+  +A +L+  MIQ G  PN   +NTL++  C  G V 
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A EL   M   GC  ++ SYS +I+G  K  + E AL L + M++KGI P  + Y+++ 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +V +  ++FD ++   + +D   Y   I  LCK      A++ F  +    C 
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
            +  +Y+ LI GL   G  K A EL   L  RG L
Sbjct: 599 PNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 3/343 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++ G C+ G   +            + P+  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P    + VI++  C++G    + ++LE M   G   +    N +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   +   GC+ ++ SY+ ++ G C  K       L  EM+     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L      ER  ++  +M  HG   D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++  Y+ ++ GLC + R K A EL   + +     D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +L   M + G  PD + + T++ G  +     + V LL  M  
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I+P+ + Y+S+          N+  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
               A+EL   + S G   KH +  + I+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGIV 644



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV ++ ++   C+ G   + +    L   + V PNA+ +  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC      Y +++   C++     ++ +   M +KG        N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I +++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI  LC++G  +   E+   +       D+  Y  +I  +C +G ++ A+++   M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G+ P+ V +NT++ G        +  ELL  M +++
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 209/393 (53%), Gaps = 12/393 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFE---EMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           C PN++T++TLI  LCR G       LFE   E++    E G  C PD  +Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           KEG ++ A E+L +M    + P+VV YN+V++G C A    EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF++++D  C+NG ++   +LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +       +   YS +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M + G 
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            P+   +  L+ G        +  ELL  +  R
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 206/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  KL  FGCE ++++Y+ ++ GLC          L +EM+       V C P+ V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E+L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + +EA +LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP  V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +  C
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +++   +  D V +N ++    +  ET + ++    M
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   GC P    Y  ++   CR+G    ++ + E M +  G     C  D  
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKG-----CTLDTG 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C++G VD+A  LL ++       D+V+YN+V++G C A    + + L  EM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M + G  P+  +Y T++DG C  G +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ ++ G C  +  + A  L SEM  K      VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA----NEILNRMPSYGL--KPNVVCYNT 326

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC      +A+ELL +M  K+   D VT+N ++  FC     +    L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C  GR   A+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + E A +L + M   G++ +T  Y +    L + G + + +++F  ++      D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK      A + F  +     + +  TY ++I  L ++G   +A +L  +
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 366 MEAKG 370
           + ++G
Sbjct: 627 LCSRG 631



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 7/335 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G +PNV+ Y+T++ GLC       A  L  EM   +      C  D V 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD------CPLDDVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++D  C+ G VD+  ELL QM      PDV+TY +VI GFC     +EA  L   M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN V++++++  LC  G+  +A +L+  MIQ G  PN   +NTL++  C  G V 
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A EL   M   GC  ++ SYS +I+G  K  + E AL L + M++KGI P  + Y+++ 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +V +  ++FD ++   + +D   Y   I  LCK      A++ F  +    C 
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
            +  +Y+ LI GL   G  K A EL   L  RG L
Sbjct: 599 PNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 3/343 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++ G C+ G   +            + P+  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P    + VI++  C++G    + ++LE M   G   +    N +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   +   GC+ ++ SY+ ++ G C  K       L  EM+     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L      ER  ++  +M  HG   D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++  Y+ ++ GLC + R K A EL   + +     D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +L   M + G  PD + + T++ G  +     + V LL  M  
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I+P+ + Y+S+          N+  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
               A+EL   + S G   KH +  + I+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGIV 644



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV ++ ++   C+ G   + +    L   + V PNA+ +  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC      Y +++   C++     ++ +   M +KG        N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I +++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI  LC++G  +   E+   +       D+  Y  +I  +C +G ++ A+++   M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G+ P+ V +NT++ G        +  ELL  M +++
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 218/402 (54%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GCE N ++Y  +I+G  +    I A +LF+EM+        +C PD + 
Sbjct: 165 ALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG-----IC-PDILT 218

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I  LCK+G V ++++L  ++  + + P++ T+N  I+G C     +EA RL   ++
Sbjct: 219 FNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV 278

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+V++++ ++   CK+ K+ EA   L  M+  GV PN F YNT+++GFC  G + 
Sbjct: 279 SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++       G   + F+YS LING C + ++  A++++ E + KG K +++ YNTL 
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   V +A +L  +M  HG + D W Y   ++GLCK G + +A  +        C 
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +++ LIDG CK   +  A E+  ++    +  DV+TYN +++ LC   K+D   D 
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  KG  P+ + +N L+    ++ + S+ +EL   M  R
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 219/398 (55%), Gaps = 6/398 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G  P+++T++ LI+ LC+ G+   +  LF +++        VC P+ 
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG-----VC-PNL 251

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +   I GLC++G +D+A  LL  +  + + PDV++YN++I GFC  +   EA+    +
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ GV+PN  T++ I++  CK G M+ A ++L   +  G  P+ F Y++L++G C  G 
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +NRA  +F      G KH++  Y+ L+ G  K   +  AL L  +M+  G  P + TYN 
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL ++  +  A  + ++    G   D + + T IDG CK   + +A+E+  T+    
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ L++GLCK+ +L    + F ++       +++TYNI+I + C D K+ +A 
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +LF +M+ +G+ PD V   TL+ G   N E  K  EL 
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 200/408 (49%), Gaps = 42/408 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L   + + G  P+VI+Y+TLI G C+    + A     +M+N   E      P+  
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEF 322

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII+G CK G +  A ++L     K   PD  TY+S+I G C   D N A  +F E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++G + +++ ++ ++  L K G + +A QL++ M++ G  P+ + YN +++G C  G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +     + GC  ++F+++ LI+GYCK + ++ A+ +   MLS GI P V+TYNTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++     F  M   G   +   Y   I+  CK+  + EA+ELF+ ++    
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF--------------------------------- 328
             DI +   LI GLC +G L  A+ELF                                 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 329 ---HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              H +       D  TY +MI + C  G +D AH   L+  +KG+ P
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 213/402 (52%), Gaps = 9/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  LF+K+   G  PN+ T++  I GLCR G    A  L E +++          PD +
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG------LTPDVI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK   + +A+  L +M +  + P+  TYN++I GFC A     A ++  + 
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G  P+  T+S +++ LC +G M  A  +    ++ G + +  +YNTL+ G    G V
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M   GC  ++++Y++++NG CK   +  A  + ++ ++KG  P + T+NTL
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +++A ++ D M  HG+  D   Y T ++GLCK   +   ++ F+ +    C
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ LI+  CK  ++  A ELF  +    L  D+VT   +I  LC++G++DKA++
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG--CIRNNETSKVVELLHRM 401
           LF+ +E +       A   +M+   C + N  S   +L H+M
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCXKLN-VSMAEKLFHKM 628



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++  + CEP+V +Y+ ++N L   G+   A  ++  M     + G+   PD  
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM----KDIGIY--PDVY 147

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T  +   C  G    A  LL  M  +    + V+Y +VI GF   N   EA  LF EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P+++TF+ ++  LCK G ++E+ +L   +++ GV PN F +N  + G C  G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L  S+ S G   +V SY+ LI G+CK+ ++  A     +M++ G++P   TYNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A K+  +    G   D + Y + I+GLC +G +  A+ +F        
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I  Y+ L+ GL K G +  A +L   +       D+ TYN++++ LC  G +  A+ 
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  D  AKG  PD   FNTL+ G  +     K +E+L  M
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIE 120
           Y  +I+ L   G  +  +++L +M+ KN++  ++   Y  ++R +       EA  +F  
Sbjct: 43  YKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     +P+V +++ IM+ L + G   +A ++   M  IG+ P+ + +   M  FC+TGR
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYN 239
              A  L  +M   GC+ N  SY  +I+G+ K N +IE A  L+ EML +GI P ++T+N
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-AYHLFDEMLKQGICPDILTFN 220

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L +   V+ + KLF ++ + GV  + + +  FI GLC+ G I EA  L  ++   
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ SY+ LI G CK  +L  A    H +    +  +  TYN +I+  C  G M  A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  D   KG  PD   +++L+ G   + + ++ + + +   E+
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 42/305 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   GC P++ TY+ ++NGLC+ G    A  +  + I         C PD 
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG------CIPDI 461

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + T+IDG CK+  +DKA E+L  M    I PDV+TYN+++ G C A   +     F  
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN++T++++++  CK+ K+ EA +L + M   G+ P+     TL+ G C  G 
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 181 VNRAKELFVSMES---------------------------------MG---CKHNVFSYS 204
           +++A ELFV++E                                  MG   C  + ++Y 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ++I+ YCK   I+ A +   E +SKG+ P+  T   +   L   H++  A  + + M ++
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 265 GVAAD 269
           G+  +
Sbjct: 702 GIVPE 706



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 44/277 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +     A GC P++ T++TLI+G C+  +   A+ + + M++     G+   PD +
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS----HGIT--PDVI 497

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++GLCK   +D   +    M +K   P+++TYN +I  FC     +EA  LF EM
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL---------------------------- 153
             +G+ P++VT   ++  LC NG++++A +L                             
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLN 617

Query: 154 -----ELMIQIG---VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                +L  ++G     P+ + Y  ++D +C TG ++ A    +   S G   +  +   
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGK 677

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           ++N  C    +  A+ + + M+  GI P  V  N++F
Sbjct: 678 VLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIF 712


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 210/405 (51%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K  GC P+   Y+ LI+G  +      A     EM+  +      C P  V
Sbjct: 28  KARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH------CLPTVV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT I+DGLCK G    A +LL +M+DK  +P++ TYN ++ G C     +EAK++  EM
Sbjct: 82  TYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 141

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+VVT++  +  LCK  +++EA + L  M    V P+   Y T+++G C +G +
Sbjct: 142 AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDL 198

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M + GC  +V +YS LI+G+CK  E+E A+ L   ML  G +P +V YN+L
Sbjct: 199 DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L  +  + +A  +  EM+R G   D  +Y   IDGLCK   + +A  +F  +    C
Sbjct: 259 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 318

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  SYS L++ LCK   L  A  L         I D++ Y +++  LC  G+ D+A  
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378

Query: 362 LFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF   ++ K   PD   +N ++    +  +  K +++  +M ERN
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423



 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 217/420 (51%), Gaps = 44/420 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P V+TY+ +++GLC+ G T  A+ L +EM +        C P+   Y  I++GLC+E 
Sbjct: 76  CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEER 129

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+AK++L +M  +   PDVVTYNS I+G C  +  +EA++    M    V P+VV+++
Sbjct: 130 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYT 186

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +++ LCK+G ++ AS++L+ M   G  P+   Y++L+DGFC  G V RA  L  SM  +
Sbjct: 187 TVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC+ N+ +Y+ L+    +   I  A  +  EM  +G  P VV+YN    GL +  +V++A
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 306

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             +FD M   G   +  +Y   ++ LCK   + +A+ L    R     +DI  Y+ L+DG
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDG 366

Query: 315 LCKSGRLKIAWELF----------------------HSLPRGVLIA-------------D 339
           LCK GR   A  LF                      H   R +  A             +
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCN 426

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVT+NI++H LC D ++  A  + L M  +G  PD V + TL+    +  +++  +EL  
Sbjct: 427 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 486



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 183/349 (52%), Gaps = 3/349 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+PDA  +  ++ GLC+   ++KA++LL +MK+    PD   YN++I G+  A D  +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +   EM+     P VVT++ I+D LCK G+ ++A +LL+ M   G  PN + YN +++G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   +++ AK++   M   G   +V +Y+  I G CK   ++ A    + M    + P V
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V+Y T+  GL +   ++ A ++ D+M   G   D   Y + IDG CK G +  A+ L  +
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  L C  ++ +Y+ L+  L + G +  A ++   + R     DVV+YN  I  LC   +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + KA  +F  M  +G  P+  +++ L+    +  E    + L+ +  E+
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 164/319 (51%), Gaps = 3/319 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M DK+  PD  T+  ++RG C +N   +A++L   M + G  P+   ++ ++    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             +A + L  M++    P    Y  ++DG C  GR   A +L   M   GC  N+++Y++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++ G C+ ++++ A  +  EM  +G  P VVTYN+   GL +  +V+ A K    + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V  D  +Y T I+GLCK+G +  A  +   +    C  D+ +YS LIDG CK G ++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L  S+ +     ++V YN ++ AL   G + KA D+ ++ME +G  PD V++N  + G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 386 IRNNETSKVVELLHRMDER 404
            +     K   +  RM ER
Sbjct: 298 CKAERVKKAKAVFDRMVER 316



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 195/417 (46%), Gaps = 51/417 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ +  ++   GC P+V+TYS+LI+G C+ G    A+ L + M+       + C+P+ V 
Sbjct: 201 ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK------LGCRPNMVA 254

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y +++  L + G + KA+++L++M+ +   PDVV+YN+ I G C A    +AK +F  M+
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314

Query: 123 DQGVQPNVVTFS-----------------------------------VIMDELCKNGKME 147
           ++G  PN  ++S                                   V++D LCK G+ +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374

Query: 148 EASQLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           EA  L   ++   +  P+ F YN ++D  C   ++++A ++   M    C  NV +++IL
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNIL 433

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G C +  +  A ++   M+ +G  P  VTY TL   + +  +   A +LF+E  + G 
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 493

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I GL       EA  LF        +LD+  ++ +I G  ++G   +  +
Sbjct: 494 VPDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGYAENGSGDLGLK 546

Query: 327 LFHSLPRGVLIADVVTYNIMIHA-LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           LF  L    +  +  T+   I   L     + KA  LF      G  PD    NTL+
Sbjct: 547 LFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLI 603



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 39/327 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC---------------RTGHTIVALNLFEEMI 46
           +A A+F ++   GC PN  +YS L+  LC               R  + IV + L+  ++
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 47  NG---NGEFG------------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           +G    G F              +C+PD   Y  ++D  CK   +DKA ++  QM ++N 
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC 424

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             +VVT+N ++ G C  +  ++A+ + + M+D+G  P+ VT+  ++D +CK GK   A +
Sbjct: 425 C-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L E  ++ G  P+   Y+ L+ G         A  LF        K +V  ++ +I GY 
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGYA 536

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG-LFEIHQVERAFKLFDEMQRHGVAADT 270
           +N   +  L L+ E++   ++P   T+     G L +   + +A  LFD   + G   D 
Sbjct: 537 ENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDL 596

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLR 297
           +   T ID   K G + EA  +F +++
Sbjct: 597 FVANTLIDVFAKCGDLEEARRIFYSMK 623


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/384 (35%), Positives = 213/384 (55%), Gaps = 15/384 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +  ++   G  P+ ITY  L+NGLC+ G    A +LF            + KP +V
Sbjct: 299 EAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYR----------IPKPTSV 348

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           I+ T+I G    G +D AK +L  M     I PDV TYNS+I G+        A  +  +
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV ++++++D  CK GK++EA  LL  M   G++PN   +N L+  FC   R
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+F  M   GCK +V++++ LI+G C+  EI+ AL L  +M+S+G+    VTYNT
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L        +++ A KL +EM   G   D   Y + I GLC+ G + +A  LF   ++L+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE--KMLR 586

Query: 301 CELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L   S SC  LI+GLC+SG ++ A E    +       D+VT+N +I+ LC  G+++ 
Sbjct: 587 DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 646

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLM 382
              +F  ++A+G+ PD V +NTLM
Sbjct: 647 GLTMFRKLQAEGIPPDTVTYNTLM 670



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 208/401 (51%), Gaps = 11/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A ++   +   GC PN + Y TLI+ L +      AL L EEM      F + C PDA 
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM------FLMGCVPDAE 282

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GLCK   +++A +++ +M  +   PD +TY  ++ G C     + AK LF  +
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGR 180
                +P  V F+ ++     +G++++A  +L  M+   G+ P+   YN+L+ G+   G 
Sbjct: 343 ----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A E+   M + GCK NV+SY+IL++G+CK  +I+ A +L +EM + G+KP  V +N 
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     + H++  A ++F EM R G   D + + + I GLC+   I  AL L R +    
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  +Y+ LI+   + G +K A +L + +     + D +TYN +I  LC  G++DKA 
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M   G+ P  ++ N L+ G  R+    + VE    M
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEM 619



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 11/387 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P+  T++ +I GLC+       +N   +M+N     G    PD +
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFT--PDDI 317

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G VD AK+L  ++      P  V +N++I GF      ++AK +  +M
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ P+V T++ ++    K G +  A ++L  M   G +PN + Y  L+DGFC  G+
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M + G K N   ++ LI+ +CK   I  A+ ++ EM  KG KP V T+N+
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL E+ +++ A  L  +M   GV A+T  Y T I+   + G I EA +L   +    
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             LD  +Y+ LI GLC++G +  A  LF  + R  L+   ++ NI+I+ LC  G +++A 
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           +   +M  +G  PD V FN+L+ G  R
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCR 640



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 209/401 (52%), Gaps = 13/401 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA +F  + +    P + T+  ++  LC       AL++  +M          C P++VI
Sbjct: 195 AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHG------CVPNSVI 248

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I  L K   V++A +LL +M      PD  T+N VI G C  +  NEA ++   M+
Sbjct: 249 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 308

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ +T+  +M+ LCK G+++ A  L   +     +P + ++NTL+ GF   GR++
Sbjct: 309 IRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLD 364

Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            AK +   M  S G   +V +Y+ LI GY K   +  AL +  +M +KG KP V +Y  L
Sbjct: 365 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTIL 424

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ L +EM   G+  +T  +   I   CK   I EA+E+FR +    C
Sbjct: 425 VDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 484

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA-WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + D+ +++ LI GLC+   +K A W L   +  GV +A+ VTYN +I+A    G++ +A 
Sbjct: 485 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINAFLRRGEIKEAR 543

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  +G   D + +N+L+ G  R  E  K   L  +M
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 159/287 (55%), Gaps = 6/287 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  GC+PNV +Y+ L++G C+ G    A NL  EM + +G      KP+ V 
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM-SADG-----LKPNTVG 455

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I   CKE  + +A E+  +M  K   PDV T+NS+I G C  ++   A  L  +M+
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  N VT++ +++   + G+++EA +L+  M+  G   +   YN+L+ G C  G V+
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A+ LF  M   G   +  S +ILING C++  +E A+    EM+ +G  P +VT+N+L 
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            GL    ++E    +F ++Q  G+  DT  Y T +  LCK G++ +A
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 185/402 (46%), Gaps = 48/402 (11%)

Query: 46  INGNGEF-------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD-KNI 91
           +  NGEF             G+V K    ++ +I+    K GF  +   L+L+M++  + 
Sbjct: 115 LGSNGEFKTIDRLLMQMKDEGIVFKES--LFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 172

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P   +YN V+      N    A  +F +M+ + + P + TF V+M  LC   +++ A  
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +L  M + G  PN+ +Y TL+       RVN A +L   M  MGC  +  +++ +I G C
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------------- 258
           K   I  A  + + ML +G  P  +TY  L  GL +I +V+ A  LF             
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352

Query: 259 -------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
                              D +  +G+  D   Y + I G  K G +  ALE+ R +R  
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ ++ SY+ L+DG CK G++  A+ L + +    L  + V +N +I A C + ++ +A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++F +M  KG  PD   FN+L+ G    +E    + LL  M
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 514



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 144/273 (52%), Gaps = 8/273 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A G +PN + ++ LI+  C+      A+ +F EM          CKPD  
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG------CKPDVY 489

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++I GLC+   +  A  LL  M  + +  + VTYN++I  F    +  EA++L  EM
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   + +T++ ++  LC+ G++++A  L E M++ G+ P++   N L++G C +G V
Sbjct: 550 VFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMV 609

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E    M   G   ++ +++ LING C+   IE  L+++ ++ ++GI P  VTYNTL
Sbjct: 610 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD--TWA 272
              L +   V  A  L DE    G   +  TW+
Sbjct: 670 MSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWS 702



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 141/252 (55%), Gaps = 6/252 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   GC+P+V T+++LI+GLC       AL L  +MI+     GVV   + V
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 524

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+   + G + +A++L+ +M  +    D +TYNS+I+G C A + ++A+ LF +M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+ ++ +++++ LC++G +EEA +  + M+  G  P+   +N+L++G C  GR+
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +F  +++ G   +  +Y+ L++  CK   +  A  L  E +  G  P   T++ L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 242 FIGLFEIHQVER 253
              L     ++R
Sbjct: 705 LQSLVPQETLDR 716



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 37/223 (16%)

Query: 181 VNRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           V+ + ELF    S  G +H+   Y +LI     N E +    L  +M  +GI    V   
Sbjct: 85  VSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGI----VFKE 140

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-I 298
           +LFI +   +                                K G+  +   L   +R +
Sbjct: 141 SLFISIMRDYD-------------------------------KAGFPGQTTRLMLEMRNV 169

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             CE   +SY+ +++ L      K+A  +F+ +    +   + T+ +++ ALCA  ++D 
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  +  DM   G  P+ V + TL+    + N  ++ ++LL  M
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 209/384 (54%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N  TY  LI+GLC+ G    A +LF EM       G+  KPD   Y  +I+G  K   ++
Sbjct: 371 NTFTYYALIHGLCKIGDLEKAEDLFSEMT----MMGI--KPDIQTYNCLIEGYYKVQNME 424

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA ELL+++K +N+  +     +++ G C+  D   A  LF EM+  G++PN+V ++ I+
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             L K G+ EEA ++L +M   G+ P+ F YNT++ GFC  G++   K   V M + G K
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLK 544

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV++Y   I+GYC+  E++ A   + EML  GI P  V    L  G  +     +AF  
Sbjct: 545 PNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAK 604

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F  M   GV  D   +   I GL KNG + EA+ +F  L       D+ +Y+ LI  LCK
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G LK A+EL   + +  +  ++VTYN +I+ LC  G++ KA +LF  +  KG+A + V 
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++T++ G  ++   ++  +L H M
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGM 748



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 222/440 (50%), Gaps = 48/440 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----CKP 58
           A  LF ++ ++G +PN++ Y+T++ GL + G        FEE I      GV+      P
Sbjct: 461 ANELFQEMISWGLKPNIVIYTTIVKGLVKEGR-------FEEAIK---ILGVMKDQGLSP 510

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y T+I G CK G +++ K  L++M  K + P+V TY + I G+C A +   A+R F
Sbjct: 511 DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           IEM+D G+ PN V  + ++D  CK+G   +A      M+  GV P+   ++ L+ G    
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A  +F  +   G   +VF+Y+ LI+  CK  +++ A  L+ +M  KGI P +VTY
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  GL ++ ++ +A +LFD +   G+A ++  Y T I G CK+  + EA +LF  +++
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELF--------HSLPR-----------GVLI-- 337
           +    D   Y  LIDG CK+G  + A  LF         S P            G LI  
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEA 810

Query: 338 -------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                         + VTY I+I   C  G + +A  LF++M+ + V P+ + + +L+ G
Sbjct: 811 YQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870

Query: 385 CIRNNETSKVVELLHRMDER 404
             R    S++  L   M  R
Sbjct: 871 YNRIGRRSEMFSLFDEMVAR 890



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  ++  ++   G +P+ + Y+ LING  +      A  + EEM      F    K +  
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM------FARKIKLNTF 373

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLCK G ++KA++L  +M    I PD+ TYN +I G+    +  +A  L IE+
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +  N      I++ LC  G +  A++L + MI  G++PN  +Y T++ G    GR 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M+  G   +VF Y+ +I G+CK  ++E   S   EM++KG+KP V TY   
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A + F EM   G+A +       IDG CK+G   +A   FR +     
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D++++S LI GL K+G+L+ A  +F  L    L+ DV TY  +I  LC +G +  A +
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFE 673

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  DM  KG+ P+ V +N L+ G  +  E +K  EL   + E+
Sbjct: 674 LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 180/333 (54%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   YT +I+  C+ G V++ K +L  M++K   P++VTY+ VI G C A D +EA  L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M ++G+ P+   ++ ++D  C+  +  E   +L+ M  +G++P+   Y  L++GF  
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              +  A ++   M +   K N F+Y  LI+G CK  ++E A  L+SEM   GIKP + T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  G +++  +E+A++L  E+++  + A+ +     ++GLC  G +  A ELF+ + 
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I  Y+ ++ GL K GR + A ++   +    L  DV  YN +I   C  GKM+
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +     ++M AKG+ P+   +   + G  R  E
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 187/378 (49%), Gaps = 6/378 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY+ LIN  CR G      ++  +M     E G  C P+ V Y+ +I GLC+ G V
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDM----EEKG--CIPNLVTYSVVIAGLCRAGDV 283

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A EL   M +K + PD   Y ++I GFC    S E K +  EM   G++P+ V ++ +
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++   K   +  A Q+ E M    ++ N F Y  L+ G C  G + +A++LF  M  MG 
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K ++ +Y+ LI GY K + +E A  L  E+  + +         +  GL     + RA +
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF EM   G+  +   Y T + GL K G   EA+++   ++      D+  Y+ +I G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G+++        +    L  +V TY   IH  C  G+M  A   F++M   G+AP+ V
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 377 AFNTLMLGCIRNNETSKV 394
               L+ G  ++  T+K 
Sbjct: 584 ICTDLIDGYCKDGNTTKA 601



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 217/439 (49%), Gaps = 44/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  +   ++ A G +PNV TY   I+G CR G    A   F EM++     G+   P+ V
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS----GIA--PNDV 583

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I T +IDG CK+G   KA      M D+ + PDV T++ +I G        EA  +F E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ P+V T++ ++  LCK G ++ A +L + M + G+ PN   YN L++G C  G +
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI------------------------- 216
            +A+ELF  +   G   N  +YS +I GYCK+  +                         
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 217 ----------EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                     E ALSL+  M+ +GI  T   +N L  G F++ ++  A++L ++M  + +
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y   I+  C  G I EA +LF  ++      ++ +Y+ L+ G  + GR    + 
Sbjct: 823 TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFS 882

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +    +  D + +++M+ A   +G   KA  L  DM ++GV   C    T+++  +
Sbjct: 883 LFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV-CKNLYTILIDAL 941

Query: 387 -RNNETSKVVELLHRMDER 404
            ++N  S+V+++L  ++++
Sbjct: 942 CKHNNLSEVLKVLDEVEKQ 960



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 200/401 (49%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F  +   G  P+V T+S LI+GL + G    A+ +F E+++     G+V  PD  
Sbjct: 600 KAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK----GLV--PDVF 653

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  LCKEG +  A EL   M  K INP++VTYN++I G C   +  +A+ LF  +
Sbjct: 654 TYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI 713

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+  N VT+S I+   CK+  + EA QL   M  +GV P++FVY  L+DG C  G  
Sbjct: 714 PEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNT 773

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF+ M   G   +  +++ LI+G+ K  ++  A  L  +M+   I P  VTY  L
Sbjct: 774 EKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                 +  ++ A +LF EMQ+  V  +   Y + + G  + G   E   LF  +     
Sbjct: 833 IEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGI 892

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + D  ++S ++D   K G    A +L    L  GV +   + Y I+I ALC    + +  
Sbjct: 893 KPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL-YTILIDALCKHNNLSEVL 951

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +  ++E +G         TL+    R   T + + +L  M
Sbjct: 952 KVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 200/402 (49%), Gaps = 16/402 (3%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------------GVVCKPDAVI 62
           N+ T+S L   LC +G    A N+ E MI+                    G       V+
Sbjct: 106 NLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVV 165

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +ID   K+GF+++A  + L  K       +   NS+ +     N      +++  M+
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + P+V T++ +++  C+ GK+EE   +L  M + G  PN   Y+ ++ G C  G V+
Sbjct: 226 G-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL  SM + G   + + Y+ LI+G+C+ K      S+  EM + G+KP  V Y  L 
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   +  AF++ +EM    +  +T+ Y   I GLCK G + +A +LF  + ++  +
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI++Y+CLI+G  K   ++ A+EL   + +  L A+      +++ LC  G + +A++L
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F +M + G+ P+ V + T++ G ++     + +++L  M ++
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 23/376 (6%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +   G   N +TYST+I G C++ +   A  LF      +G   V   PD+ 
Sbjct: 705  KARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF------HGMKLVGVPPDSF 758

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +Y  +IDG CK G  +KA  L L M ++ I      +N++I GF       EA +L  +M
Sbjct: 759  VYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDM 817

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +D  + PN VT++++++  C  G ++EA QL   M +  V PN   Y +L+ G+   GR 
Sbjct: 818  VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRR 877

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +    LF  M + G K +  ++S++++ + K      AL L  +MLS+G+      Y  L
Sbjct: 878  SEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTIL 937

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               L + + +    K+ DE+++ G         T +    + G   EAL +  ++     
Sbjct: 938  IDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM----- 992

Query: 302  ELDIRSYSCLIDGLCKSGR--------LKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
               +RS+  L++   ++G         L I  E   SL   +   DV  +  +  +    
Sbjct: 993  ---VRSFLNLLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTLDVDLFKELSSSTSNQ 1049

Query: 354  GKMDKAHDLFLDMEAK 369
            GK   A    L   AK
Sbjct: 1050 GKNASAMAPKLGSSAK 1065



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 25/341 (7%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC  G    A  +L +M D   NP V   +S+I+  CY            E+       +
Sbjct: 117 LCNSGLFGNAANVLERMIDTR-NPHVKILDSIIK--CYK-----------EINGSSSSSS 162

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY-----NTLMDGFCLTGRVNRA 184
           VV F +++D   K G + EA  +      +G + N F+      N+L        RV   
Sbjct: 163 VVVFEILIDIYRKKGFLNEAVSVF-----LGAKTNEFIVGLACCNSLSKDLLKGNRVELF 217

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +++  M       +V++Y+ LIN YC+  ++E    +  +M  KG  P +VTY+ +  G
Sbjct: 218 WKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAG 276

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L     V+ A +L   M   G+  D + Y T IDG C+     E   +   +  +  + D
Sbjct: 277 LCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPD 336

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI+G  K   +  A+++   +    +  +  TY  +IH LC  G ++KA DLF 
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +M   G+ PD   +N L+ G  +     K  ELL  + + N
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 220/401 (54%), Gaps = 6/401 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  ++++ G  PN+ TY+  I  L R G    A  + + M +        C PD V YT
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG------CGPDVVTYT 303

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +ID LC    +D A  L  +MK  +  PD VTY +++  F      ++ ++++ EM   
Sbjct: 304 VLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEAD 363

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VVTF+++++ LCK G++ EA  LL+ M + GV PN   YNTL+ G     R++ A
Sbjct: 364 GYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDA 423

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +LF +MES+G +   ++Y +LI+ + K+     AL  + +M ++GI P +V  N     
Sbjct: 424 LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYS 483

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L E+ ++  A  +F+E++  G+A D+  Y   +    K G + EA++L   +  ++CE D
Sbjct: 484 LAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LID L K+GR++ AW++F  +    L   VVTYNI++  L  +G++ KA  LF 
Sbjct: 544 VIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M   G +P+ + FNTL+    +N+E    +++ ++M   N
Sbjct: 604 SMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 205/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   GC P+V+TY+ LI+ LC       A+ LF +M + +       KPD V
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH------KPDKV 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D     G +DK +++  +M+     PDVVT+  ++   C A   NEA  L   M
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV PN+ T++ ++  L +  ++++A  L   M  +GV P A+ Y  L+D    +G  
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHP 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E F  M++ G   N+ + +  +    +   +  A ++++E+ S G+ P  VTYN +
Sbjct: 456 GKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++ QV+ A KL  EM +     D     + ID L K G + EA ++F  +  +  
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNL 575

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+ GL K G+++ A +LF S+       + +T+N ++  LC + ++D A  
Sbjct: 576 APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALK 635

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +F  M      PD + FNT++ G I+ N+    + L H+M +
Sbjct: 636 MFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK 677



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 213/440 (48%), Gaps = 44/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +   GC PN IT++TL++ LC+     +AL +F +M   N      C+PD +
Sbjct: 597  KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN------CRPDVL 650

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------F 105
             + TII G  K+  +  A  L  QMK K + PD VT  +++ G                F
Sbjct: 651  TFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDF 709

Query: 106  CYANDSNEAKRLFIEMM-----DQGVQPNVV---------------TFSVIMDELCKNGK 145
             Y   SN  +  + ++M     + G +  ++                   I+  LCK+ K
Sbjct: 710  FYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKK 769

Query: 146  MEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
               A  + ++   ++GV+P   VYN L+DGF     V  A  LF  M+S GC  + F+Y+
Sbjct: 770  TSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYN 829

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
             LI+ + K+ +I     LY EML++G KP  +TYN +   L + +++++A  L+  +   
Sbjct: 830  SLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
              +     +   IDGL K+G + +A E+F  +    C  +   Y+ L++G  K G +  A
Sbjct: 890  DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTA 949

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             E F  + +  +  D+ +Y I++  LC  G++D A   F  ++  G+ PD VA+N ++ G
Sbjct: 950  CEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING 1009

Query: 385  CIRNNETSKVVELLHRMDER 404
              R+  T + + L H M  R
Sbjct: 1010 LGRSQRTEEALSLFHEMQNR 1029



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 207/389 (53%), Gaps = 7/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LFTK+K+   +P+ +TY TL++     GH      ++ EM   +G       PD V
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM-EADG-----YAPDVV 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +++ LCK G +++A +LL  M+ + + P++ TYN++I G   AN  ++A  LF  M
Sbjct: 371 TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV+P   T+ +++D   K+G   +A +  E M   G+ PN    N  +      GR+
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F  ++S G   +  +Y++++  Y K  +++ A+ L SEM     +P V+  N+L
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L++  +VE A+++F  M+   +A     Y   + GL K G I +A++LF ++    C
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +++ L+D LCK+  + +A ++F+ +       DV+T+N +IH      ++  A  
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           LF  M+ K + PD V   TL+ G I++ +
Sbjct: 671 LFHQMK-KLLRPDHVTLCTLLPGVIKSGQ 698



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +   K++  G   N  +Y+ LI+ L ++G    AL ++  M++         KP   
Sbjct: 177 QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG------LKPSLK 230

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ ++    K   +     LL +M+   + P++ TY   IR        +EA R+   M
Sbjct: 231 TFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM 290

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+VVT++V++D LC   K+++A  L   M     +P+   Y TL+D F   G +
Sbjct: 291 DDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHL 350

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++ ++++  ME+ G   +V +++IL+N  CK   I  A  L   M  +G+ P + TYNTL
Sbjct: 351 DKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTL 410

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL   ++++ A  LF  M+  GV    + Y   ID   K+G+  +ALE F  ++    
Sbjct: 411 ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L + GRL  A  +F+ L    L  D VTYN+M+      G++D+A  
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +M      PD +  N+L+    +     +  ++  RM+E N
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 179/357 (50%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            +I  LC+   T VA N+F   +    E GV  KP   +Y  +IDG  +   V+ A  L  
Sbjct: 760  IIKVLCKHKKTSVARNVF---VKFTKELGV--KPTLKVYNLLIDGFLEVHNVEVAWNLFE 814

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +MK     PD  TYNS+I     +   NE   L+ EM+ +G +PN +T+++++  L K+ 
Sbjct: 815  EMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSN 874

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            ++++A  L   ++     P    +  L+DG   +GR++ A E+F  M   GC+ N   Y+
Sbjct: 875  RLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYN 934

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            IL+NGY K   ++ A   +  M+ +GI+P + +Y  L   L    +V+ A   F+++++ 
Sbjct: 935  ILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQA 994

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL ++    EAL LF  ++      D+ +Y+ LI  L   G ++ A
Sbjct: 995  GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             +++  L    L  +V TYN +I      G  + A+ ++  M   G  P+   F  L
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 34/414 (8%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE----------- 51
            A  LF ++K     P+ +T  TL+ G+ ++G    A  + E+     G            
Sbjct: 668  AIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 52   --------------FG------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKN 90
                          FG       +CK D+V+   II  LCK      A+ + ++  K+  
Sbjct: 727  GGILTEAGTEKAILFGERLVCRAICKDDSVL-IPIIKVLCKHKKTSVARNVFVKFTKELG 785

Query: 91   INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
            + P +  YN +I GF   ++   A  LF EM   G  P+  T++ ++D   K+GK+ E  
Sbjct: 786  VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELF 845

Query: 151  QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
             L + M+  G +PN   YN ++     + R+++A +L+ ++ S        ++  LI+G 
Sbjct: 846  DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905

Query: 211  CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             K+  ++ A  ++  M+  G +P    YN L  G  ++  V+ A + F  M + G+  D 
Sbjct: 906  LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965

Query: 271  WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +Y   +D LC  G + +AL  F  L+    + D+ +Y+ +I+GL +S R + A  LFH 
Sbjct: 966  KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +    ++ D+ TYN +I  L   G +++A  ++ +++  G+ P+   +N L+ G
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRG 1079



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 162/318 (50%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  I   L   G + +A   L +M++     +  +YN +I     +    EA  ++  M+
Sbjct: 162 YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P++ TFS +M    K   ++    LLE M  +G+RPN + Y   +      G+++
Sbjct: 222 SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   M+  GC  +V +Y++LI+  C  ++++ A+ L+++M S   KP  VTY TL 
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +   +++  K++ EM+  G A D   +   ++ LCK G I EA +L  T+R     
Sbjct: 342 DKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVL 401

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ LI GL ++ RL  A +LF ++    +     TY ++I      G   KA + 
Sbjct: 402 PNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALET 461

Query: 363 FLDMEAKGVAPDCVAFNT 380
           F  M+A+G+AP+ VA N 
Sbjct: 462 FEKMKARGIAPNIVACNA 479



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 139/286 (48%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  Q ++ NV T+ +I   L   G + +A   LE M + G   NA+ YN L+    
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +G    A E++  M S G K ++ ++S L+    K + I+  + L  EM S G++P + 
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY      L    +++ A+++   M   G   D   Y   ID LC    + +A+ LF  +
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +    + D  +Y  L+D     G L    +++  +       DVVT+ I+++ALC  G++
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           ++A DL   M  +GV P+   +NTL+ G +R N     ++L   M+
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  +F  +  +GC PN   Y+ L+NG  + GH   A   F+ M+          +PD  
Sbjct: 913  DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG------IRPDLK 966

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT ++D LC  G VD A     ++K   ++PD+V YN +I G   +  + EA  LF EM
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ T++ ++  L   G +EEA ++ E +  IG++PN F YN L+ G+ L+G  
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              A  ++  M   GC  N  +++ L N
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 14/289 (4%)

Query: 125 GVQPNVV----TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           G  PNVV    T + +++ L  + ++E+ + + +LM +  +R N   Y  +     + G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILIN-----GYCKNKEIEGALSLYSEMLSKGIKPTV 235
           + +A      M   G   N +SY+ LI+     G+CK      AL +Y  M+S+G+KP++
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKE-----ALEVYRRMVSEGLKPSL 229

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T++ L +   +   ++    L +EM+  G+  + + Y   I  L ++G I EA  + + 
Sbjct: 230 KTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKR 289

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  D+ +Y+ LID LC + +L  A  LF  +       D VTY  ++      G 
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +DK   ++ +MEA G APD V F  L+    +    ++  +LL  M ++
Sbjct: 350 LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 81/138 (58%), Gaps = 6/138 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A   F KLK  G +P+++ Y+ +INGL R+  T  AL+LF EM N     G+V  PD  
Sbjct: 983  DALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR----GIV--PDLY 1036

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y ++I  L   G +++A ++  +++   + P+V TYN++IRG+  + +S  A  ++ +M
Sbjct: 1037 TYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096

Query: 122  MDQGVQPNVVTFSVIMDE 139
            M  G  PN  TF+ + ++
Sbjct: 1097 MVGGCDPNTGTFAQLPNQ 1114



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 4/180 (2%)

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFK----LFDEMQRHGVAADTWAYRTFIDGLCKN 283
           S G  P VV        + EI +V R  +    +FD MQR  +  +   Y      L   
Sbjct: 113 SVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIR 172

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + +A      +R     L+  SY+ LI  L +SG  K A E++  +    L   + T+
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++ A      +     L  +ME+ G+ P+   +   +    R+ +  +   ++ RMD+
Sbjct: 233 SALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD 292


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 224/403 (55%), Gaps = 6/403 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A +LF ++K  G  P+++TY+TLI+G  + G    ++ LFEEM     +F + C+PD 
Sbjct: 149 LTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM-----KF-MGCEPDV 202

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +I+  CK   + +A E   +MKDK++ P+V++Y+++I   C       A + F++
Sbjct: 203 ITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVD 262

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ PN  T+S ++D  CK G + EA  L + M+Q  V  N   Y TL+DG C  G 
Sbjct: 263 MTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGM 322

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A+ELF +M   G   N+ +Y+ LI+G+ K + ++ A+ L++EM  K IKP ++ + T
Sbjct: 323 MNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGT 382

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL    ++E    +  EM+  G+ A+   Y T +D   K G   EA+ L   +R L 
Sbjct: 383 IVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E+ + ++  LIDGLCK G ++ A   F  +P   L  +V  Y  +I  LC +  +  A 
Sbjct: 443 TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAK 502

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M+ K + PD +A+  ++ G +++    + + + ++M E
Sbjct: 503 KLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMME 545



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 196/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  LF ++K  GCEP+VITY+ LIN  C+    + A   F EM + +       KP+ +
Sbjct: 185 ESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD------LKPNVI 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID LCKEG +  A +  + M    + P+  TY+S+I   C A +  EA  L  EM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V  N+VT++ ++D LC+ G M EA +L   M + GV PN   Y  L+ G      +
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A ELF  M     K ++  +  ++ G C   ++E    + +EM   GI    V Y TL
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+      A  L +EM+  G       +   IDGLCK G + EA+  F  +     
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDL 478

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LIDGLCK+  +  A +LF  +    +I D + Y  MI      G   +A +
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M   G+  D  A+ +L+ G  +  +  +  + L  M
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEM 578



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 186/349 (53%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L + G ++ A +  L+M    + P   + N+ +     A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           +  F +M+  G+ P V T+++++  +CK G M  A  L E M ++G+ P+   YNTL+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G ++ +  LF  M+ MGC+ +V +Y+ LIN +CK K +  A   + EM  K +KP 
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V++Y+TL   L +   ++ A K F +M R G+  + + Y + ID  CK G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I +Y+ L+DGLC+ G +  A ELF ++ +  +  ++  Y  +IH      
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            MDKA +LF +M  K + PD + + T++ G    ++  +   ++  M E
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKE 405



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 6/265 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF +++    +P+++ + T++ GLC          +  EM     E G+   P  V
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM----KESGIGANP--V 413

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT++D   K G   +A  LL +M+D      VVT+ ++I G C      EA   F  M
Sbjct: 414 IYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRM 473

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D  +QPNV  ++ ++D LCKN  + +A +L + M    + P+   Y  ++DG    G  
Sbjct: 474 PDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNF 533

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M  MG + ++++Y+ L+ G  +  +++ A    +EM+ KGI P       L
Sbjct: 534 QEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRL 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
               +E+  ++ A +L +E+   G+
Sbjct: 594 LRKHYELGNIDEAIELQNELVEKGL 618



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 6/197 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G E  V+T+  LI+GLC+ G    A+  F  M + +       +P+  
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD------LQPNVA 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +IDGLCK   +  AK+L  +M+DKN+ PD + Y ++I G     +  EA  +  +M
Sbjct: 484 VYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G++ ++  ++ ++  L + G++++A + L  MI  G+ P+  +   L+      G +
Sbjct: 544 MEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNI 603

Query: 182 NRAKELFVSMESMGCKH 198
           + A EL   +   G  H
Sbjct: 604 DEAIELQNELVEKGLIH 620


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 211/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF KL   G  P+ + Y++LI+GLC       A  LF +M N  G     C P  V
Sbjct: 28  DARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID  CK G +++A +L+ +M +    PDVVTYN+V+ G C +    EA  LF EM
Sbjct: 82  TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  + + I+  LC+  K+++A Q+   M    + P+++ Y  L+DG    G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +LF  M   G   +  +Y+++I+G C    ++ AL L+  M SKG +P+  T+N L
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++ AF+L   M   G   D   Y T I GLC    + +A  L   +   +C
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + + + LI GLCK+GR+K A E+  ++       DVVTYN ++H  C  G+ ++A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  DM A+G+AP+ V +  L+ G  + N   +   +  +M
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 216/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G  P+V+TY+T+++GLC++G    AL LF EM        + C P+  
Sbjct: 98  EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER------LGCTPNRR 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + TII GLC++  +D+A ++  +M+ ++I PD  +Y  +I G   A   NEA +LF  M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ VT++V++  +C    ++EA +L + M   G RP+ F +N L+D  C  G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   +V +YS LI+G C    ++ A  L  +M+ +  KPTVVT NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A ++ D M   G + D   Y T + G C+ G    A EL   +     
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ L+ GLCK+ RL  A  +F  +       ++ TY  +I   C+ G++D    
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF +M   G++PD V + TL     ++  +++ +E+L    E
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 205/389 (52%), Gaps = 6/389 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  +Y  LI+GL + G    A +LF+++++     GV   P  V YT++I GLC     
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHS----GVT--PSTVAYTSLIHGLCMANSF 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A+EL   M  +   P  VTYN +I   C      EA  L  +M++ G  P+VVT++ +
Sbjct: 62  DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           MD LCK+G++EEA  L   M ++G  PN   +NT++ G C   ++++A ++F  ME+   
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             + +SY ILI+G  K  ++  A  L+  ML  GI P+ VTYN +  G+   + ++ A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  M+  G     + +   ID  CK G + EA  L + +       D+ +YS LI GLC
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
              R+  A  L   + +      VVT N +IH LC  G++ +A ++   M + G +PD V
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +NTL+ G  R  +T +  ELL  M  R 
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARG 390



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 195/380 (51%), Gaps = 15/380 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G  P+ +TY+ +I+G+C       AL LF+ M +        C+P   
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRF 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D+A  LL +M D    PDVVTY+++I G C     ++A+ L  +M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P VVT + ++  LCK G+++EA ++L+ M+  G  P+   YNTL+ G C  G+ 
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  P + TY  L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-ILK 300
            +G     QV+   KLF EM   G++ D   Y T    LCK+G    ALE+ R  R  L+
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496

Query: 301 CE-LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E      Y   +DGL  +G++++A      + RG  +        ++  LC  G+  +A
Sbjct: 497 SEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 360 H-------DLFLDMEAKGVA 372
                   DL    +A+G A
Sbjct: 557 RAVLEEIMDLAYGGKARGKA 576



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 154/283 (54%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ V P+  ++ +++D L K GK+ +A  L + ++  GV P+   Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A+ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  P VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY  LIDGL K+G+L  A++LF  +    +    VTYN++IH +C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +LF  M +KG  P    FN L+    +  +  +   LL RM +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 167/320 (52%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M ++N++PD  +Y  +I G   A   N+A+ LF +++  GV P+ V ++ ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            ++A +L   M + G  P+   YN ++D  C  G +  A +L   M   G   +V +Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G CK+  +E AL L++EM   G  P   ++NT+ +GL +  ++++A ++F EM+   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D+W+Y   IDGL K G + EA +LFR +          +Y+ +I G+C +  L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ELF S+          T+NI+I A C  GKMD+A  L   M   G  PD V ++TL+ G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 386 IRNNETSKVVELLHRMDERN 405
                      LL  M +R 
Sbjct: 301 CSIARVDDARHLLEDMVKRQ 320


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 218/402 (54%), Gaps = 8/402 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA    +K+   G  P+  TY++LI G CR      A  +F  M N        C+ + 
Sbjct: 231 VEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG------CRRNE 284

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN-EAKRLFI 119
           V YTTII GLC+ G +D+   L  +M++ +  P V TY  +I    + ND N E   LF 
Sbjct: 285 VSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDRNLEGMDLFN 343

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM ++  +PNV T++V++D +CK  K++E+ ++L  M++ G+ P+   YN L+ G+C  G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A E+   MES  C+ N  +Y+ LI G+ K K +  A++L S+ML   + P++VTYN
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L     +    + A+KL D ++ +G+  D W Y  FID LCK+  + EA +LF +L+  
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   Y+ LIDG CK+G++  A  L   +     + +  TYN +I+ +C +GK+ + 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +  +M   GV P    +  L+   +R  +      + ++M
Sbjct: 584 LSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM 625



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   GC  N ++Y+T+I+GLC  G     ++LF++M   +      C P    
Sbjct: 268 AYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD------CYPTVRT 321

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT II  L       +  +L  +M++++  P+V TY  ++   C     +E++R+  EMM
Sbjct: 322 YTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM 381

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+VVT++ ++   C+ G++E A ++L LM     RPN   YN L+ GF     V+
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  L   M       ++ +Y+ LI+  CK    + A  L   +   G+ P   TY+   
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  ++E A  LF+ ++  G+ A+   Y   IDG CK G I EA+ L   +    C 
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL 561

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ LI G+CK G+++    +  ++ +  +   V TY I+I  +  +G  D A+ +
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
           F  M + G  PD   +   +
Sbjct: 622 FNQMVSFGHKPDVYTYTAFI 641



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 194/382 (50%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   LF +++   CEPNV TY+ +++ +C+      +  +  EM+    E G+V  P  
Sbjct: 336 LEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM----EKGLV--PSV 389

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I G C+EG ++ A E+L  M+  N  P+  TYN +I GF      ++A  L  +
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P++VT++ ++   CK G  + A +LL+L+ + G+ P+ + Y+  +D  C + R
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +LF S++  G K N   Y+ LI+G+CK  +I+ A+SL   M S+   P   TYN+
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G+ +  +V+    + + M + GV      Y   I+ + + G    A  +F  +    
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D+ +Y+  I   C SG +K A  +   +    ++ D +TY ++I A    G    A 
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           ++   M   G  P    +N L+
Sbjct: 690 NVLKRMLDAGCDPSHPIWNNLI 711



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 184/387 (47%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+ T +T++N   + G+ IV  NL+   I     F     PD+  YT++I G C+   V
Sbjct: 212 PNIYTLNTMVNAYSKMGN-IVEANLYVSKI-----FQAGLSPDSFTYTSLILGYCRNNDV 265

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A ++   M +K    + V+Y ++I G C A   +E   LF +M +    P V T++VI
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVI 325

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L  N +  E   L   M +    PN   Y  ++D  C   +++ ++ +   M   G 
Sbjct: 326 IHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ LI GYC+   IE AL +   M S   +P   TYN L  G  +   V +A  
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +M    +      Y + I   CK G+   A +L   L+      D  +YS  ID LC
Sbjct: 446 LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLC 505

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KS R++ A +LF+SL    + A+ V Y  +I   C  GK+D+A  L   M ++   P+  
Sbjct: 506 KSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSS 565

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            +N+L+ G  +  +  + + ++  M +
Sbjct: 566 TYNSLIYGVCKEGKVQEGLSMVENMSK 592



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 192/384 (50%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V +Y+ L+  L R         ++ EM+N       +  P+     T+++   K G + 
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLND------MIVPNIYTLNTMVNAYSKMGNIV 231

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A   + ++    ++PD  TY S+I G+C  ND N A ++F  M ++G + N V+++ I+
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC+ G+++E   L + M +    P    Y  ++       R     +LF  M    C+
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+++++  CK ++++ +  + +EM+ KG+ P+VVTYN L  G  E  ++E A ++
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
              M+ +    +   Y   I G  K  ++ +A+ L   +   K    + +Y+ LI   CK
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +G    A++L   L    L+ D  TY++ I  LC   +M++A DLF  ++ KG+  + V 
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVM 531

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +  L+ G  +  +  + + LL RM
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERM 555



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 162/343 (47%), Gaps = 2/343 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++  L +   +D+ K +  +M +  I P++ T N+++  +    +  EA     ++ 
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T++ ++   C+N  +  A ++  +M   G R N   Y T++ G C  GR++
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301

Query: 183 RAKELFVSMESMGCKHNVFSYSILING-YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               LF  M    C   V +Y+++I+  +  ++ +EG + L++EM  +  +P V TY  +
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG-MDLFNEMRERSCEPNVHTYTVM 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              + +  +++ + ++ +EM   G+      Y   I G C+ G I  ALE+   +    C
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + R+Y+ LI G  K   +  A  L   +    L   +VTYN +IH  C  G  D A+ 
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ++  G+ PD   ++  +    ++    +  +L + + E+
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 115/238 (48%)

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN L+        ++  K ++  M +     N+++ + ++N Y K   I  A    S++ 
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             G+ P   TY +L +G    + V  A+K+F+ M   G   +  +Y T I GLC+ G I 
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           E + LF+ +R   C   +R+Y+ +I  L  + R     +LF+ +       +V TY +M+
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A+C + K+D++  +  +M  KG+ P  V +N L+ G          +E+L  M+  N
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 101/208 (48%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K +V SY+ L+    +   I+    +Y+EML+  I P + T NT+     ++  +  A  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
              ++ + G++ D++ Y + I G C+N  +  A ++F  +    C  +  SY+ +I GLC
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           ++GR+     LF  +        V TY ++IHAL  + +  +  DLF +M  +   P+  
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  ++    +  +  +   +L+ M E+
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEK 383



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 55/106 (51%)

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +K +L +RSY+ L+  L +   +     ++  +   +++ ++ T N M++A    G + +
Sbjct: 173 IKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVE 232

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A+     +   G++PD   + +L+LG  RNN+ +   ++ + M  +
Sbjct: 233 ANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 212/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF KL   G  P+ + Y++LI+GLC       A  LF +M N  G     C P  V
Sbjct: 28  DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID  CK G +++A +L+ +M +    PDVVTYN+V+ G C ++   EA  LF EM
Sbjct: 82  TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  + + I+  LC+  K+++A Q+   M    + P+++ Y  L+DG    G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +LF  M   G   +  +Y+++I+G C    ++ AL L+  M SKG +P+  T+N L
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++ AF+L   M   G   D   Y T I GLC    + +A  L   +   +C
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + + + LI GLCK+GR+K A E+  ++       DVVTYN ++H  C  G+ ++A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  DM A+G+AP+ V +  L+ G  + N   +   +  +M
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421



 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G  P+V+TY+T+++GLC++     AL LF EM        + C P+  
Sbjct: 98  EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTPNRR 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + TII GLC++  +D+A ++  +M+ K+I PD  +Y  +I G   A   NEA +LF  M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ VT++V++  +C    ++EA +L + M   G RP+ F +N L+D  C  G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   +V +YS LI+G C    ++ A  L  +M+ +  KPTVVT NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A ++ D M   G + D   Y T + G C+ G    A EL   +     
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ L+ GLCK+ RL  A  +F  +       ++ TY  +I   C+ G++D    
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF +M   G++PD V + TL     ++  +++ +E+L    E
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  +Y  LI+GL + G    A NLF+++++     GV   P  V YT++I GLC     
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHS----GVT--PSTVAYTSLIHGLCMANSF 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A+EL   M  +   P  VTYN +I   C      EA  L  +M++ G  P+VVT++ +
Sbjct: 62  DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           MD LCK+ ++EEA  L   M ++G  PN   +NT++ G C   ++++A ++F  ME+   
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             + +SY ILI+G  K  ++  A  L+  ML  GI P+ VTYN +  G+   + ++ A +
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  M+  G     + +   ID  CK G + EA  L + +       D+ +YS LI GLC
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
              R+  A  L   + +      VVT N +IH LC  G++ +A ++   M + G +PD V
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +NTL+ G  R  +T +  ELL  M  R 
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARG 390



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 196/380 (51%), Gaps = 15/380 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G  P+ +TY+ +I+G+C       AL LF+ M +        C+P   
Sbjct: 203 EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRF 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D+A  LL +M D    PDVVTY+++I G C     ++A+ L  +M
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P VVT + ++  LCK G+++EA ++L+ M+  G  P+   YNTL+ G C  G+ 
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  P + TY  L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-ILK 300
            +G     QV+   KLF EM   G++ D   Y T    LCK+G    ALE+ R  R  L+
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496

Query: 301 CE-LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E      Y   +DGL ++G++++A      + RG  +        ++  LC  G+  +A
Sbjct: 497 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 360 H-------DLFLDMEAKGVA 372
                   DL    +A+G A
Sbjct: 557 RAVLEEIMDLAYGGKARGKA 576



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 154/283 (54%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ V P+  ++ +++D L K GK+ +A  L + ++  GV P+   Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A+ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  P VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY  LIDGL K+G+L  A++LF  +    +    VTYN++IH +C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +LF  M +KG  P    FN L+    +  +  +   LL RM +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 167/320 (52%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M ++N++PD  +Y  +I G   A   N+A+ LF +++  GV P+ V ++ ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            ++A +L   M + G  P+   YN ++D  C  G +  A +L   M   G   +V +Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G CK+  +E AL L++EM   G  P   ++NT+ +GL +  ++++A ++F EM+   
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D+W+Y   IDGL K G + EA +LF+ +          +Y+ +I G+C +  L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ELF S+          T+NI+I A C  GK+D+A  L   M   G  PD V ++TL+ G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 386 IRNNETSKVVELLHRMDERN 405
                      LL  M +R 
Sbjct: 301 CSIARVDDARHLLEDMVKRQ 320


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/406 (34%), Positives = 221/406 (54%), Gaps = 9/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G EPNV+ YS+L+ G C++G       +F EM     E G+  +PD V
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM----SEKGI--EPDVV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +ID LCK G   KA  ++  M  + + P+VVTYN +I   C      EA  +  +M
Sbjct: 222 MYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDGFCLTG 179
            ++GV P+VVT++ ++  L    +M+EA  LLE M++    V+PN   +N+++ G C  G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+ +A ++   ME  GC  N+ +Y++LI G  +  ++  A+ L  EM S G++P   TY+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  ++ QV+RA  L   M+  G+  + + Y   +  +C+ G +  A  LF  +   
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD+ +YS +I G CK+G LK A EL  S+    L  D VTY+I+I+     G M+ A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +   M A G  PD   F++L+ G     E +KV+EL+  M  +N
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 212/403 (52%), Gaps = 8/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   L +     + ++Y+T++  LCR GH   A  L   M   + E    C+P+AV
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAM---SLEPHPACRPNAV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++  LC +   D+A  LL  M+   +  DVVTY ++IRG C A + ++A  L  EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PNVV +S ++   CK+G+ E+  ++   M + G+ P+  +Y  L+D  C  G+ 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +   M   G + NV +Y++LIN  CK   ++ A+ +  +M  KG+ P VVTYNTL
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             GL ++ +++ A  L +EM R    V  +   + + I GLC  G + +A ++   +   
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C +++ +Y+ LI GL +  +++ A EL   +    L  D  TY+I+I   C   ++D+A
Sbjct: 357 GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRA 416

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            DL   M  +G+ P+   +  L++         +   L + MD
Sbjct: 417 EDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 211/399 (52%), Gaps = 9/399 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   +F ++   G EP+V+ Y+ LI+ LC+ G    A  + + M+    E      P+ V
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ +CKEG V +A  +L +M +K + PDVVTYN++I+G     + +EA  L  EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +     V+PNVVTF+ ++  LC  G+M +A Q+  +M + G   N   YN L+ G     
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V +A EL   M S+G + + F+YSILI G+CK  +++ A  L S M  +GI+P +  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L + + E   +ERA  LF+EM  +    D  AY T I G CK G +  A EL +++   
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +YS +I+   KSG ++ A  +   +     + DV  ++ +I      G+++K 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +L  +M  K +A D    +TL    + +NE   +++ L
Sbjct: 556 LELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM---LSKGIKPTVVTYNTLFIGLFE 247
           ++++    +  SY+ ++   C+    + A +L   M        +P  V+Y  L   L  
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
               ++A  L   M+  GV AD   Y T I GLC    + +A+EL   +     E ++  
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           YS L+ G CKSGR +   ++F  +    +  DVV Y  +I +LC  GK  KAH +   M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +G+ P+ V +N L+    +     + + +L +M E+
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 213/406 (52%), Gaps = 44/406 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN  TY  LI G    G   +A+ L EEM   NG  G     +AV++TT++ GLC  G
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEM-KSNGFEG-----NAVVHTTLMKGLCDAG 58

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V +A E    M  K+  PDV+TY +++   C A   +EA+ +  EM+ +G  P+ VTFS
Sbjct: 59  RVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGV--------------------------------- 161
            ++D LCK G  E+A ++LE +IQ G+                                 
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIA 177

Query: 162 ---RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P   ++N +++GFC    ++ A +L   M   GC  NVF+++ILI G CK   +  
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L  +M++ G  P VVTY+T+  GL +  QV+ A++LF  M+R     +   +   ID
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLI 337
           GLCK   I EA +L+  +R   C  DI +Y+ LIDGLCKS ++  A++LF ++P  GV  
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A+ VTY+ + H   A G+M  A  +F  +  KG +PD   + +L+L
Sbjct: 358 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 403



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/410 (34%), Positives = 217/410 (52%), Gaps = 15/410 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---GNGEFGVVCKP 58
           EA  +  ++ A GC P+ +T+STLI+GLC+ G    A  + E++I    GN +       
Sbjct: 96  EAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD------- 148

Query: 59  DAVIYTTIIDGLC-KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
               + TII  LC K   V+ A ++L  +  K   P V+ +N VI GFC A D + A +L
Sbjct: 149 --AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKL 206

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M+++G  PNV TF++++  LCK  ++ EA QLLE M+  G  PN   Y+T+++G C 
Sbjct: 207 LEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCK 266

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V+ A ELF  ME   C  NV +++ILI+G CK K IE A  LY  M   G  P ++T
Sbjct: 267 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 326

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           YN+L  GL +  QV+ AF+LF  +   GV AA+   Y T   G    G + +A  +F  L
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +Y+ LI   CK+ R     EL   +        V T + ++  L      
Sbjct: 387 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR-MDERN 405
           ++A  LF  M A+G   D + +N ++ G  R ++ +K + +L + +D+R+
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRD 496



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 208/429 (48%), Gaps = 45/429 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PNV T++ LI GLC+      A  L E+M+ G       C P+ V Y+T+I+GLCK+
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG------CSPNVVTYSTVINGLCKQ 267

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD A EL   M+ +N  P+VVT+N +I G C A    EA++L+  M + G  P+++T+
Sbjct: 268 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + ++D LCK+ +++EA QL + + + GV   NA  Y+TL  G+   GR+  A  +F  + 
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LI  YCK       + L  EM SKG  P V T + +  GLFE +  E
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDG--------------------------------- 279
           RA +LFD M   G   D   Y   ++G                                 
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVD 507

Query: 280 -----LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
                LC+ G   +A +L   +        + SY+ L+ GL +  R   A ++F ++   
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               ++ T N++I  LC+  K+D A++L   M   G  PD    NTL+ G  ++      
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 627

Query: 395 VELLHRMDE 403
            +LL  M E
Sbjct: 628 RKLLEEMTE 636



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 193/412 (46%), Gaps = 45/412 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   GC PNV+TYST+INGLC+ G    A  LF+ M   N      C P+ V
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +IDGLCK   +++A++L  +M++    PD++TYNS+I G C +   +EA +LF  +
Sbjct: 291 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350

Query: 122 MDQGVQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + GV   N VT+S +       G+M +A ++  +++  G  P+   Y +L+  +C T R
Sbjct: 351 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410

Query: 181 V-----------------------------------NRAKELFVSMESMGCKHNVFSYSI 205
                                                RA +LF SM + GC  +   Y++
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470

Query: 206 LINGYCKNKEIEGALSLYSEMLSK---GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ G  +  +   AL++  +++ K      P+    + L   L ++ + + A +L  +M 
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G AA   +Y   + GL +     EA ++F  +       +I + + +I  LC + ++ 
Sbjct: 531 ERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVD 590

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            A+EL   + +     D+ T N +I   C  G+ D A  L  +M   G+ P+
Sbjct: 591 DAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 140/279 (50%), Gaps = 2/279 (0%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PN  T+ +++      G ++ A QLLE M   G   NA V+ TLM G C  GRV  A E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F +M +  C  +V +Y+ L++  CK  + + A  +  EM+++G  P  VT++TL  GL +
Sbjct: 67  FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC-ELDIR 306
               E+AF++ +++ + G+     A+ T I  LC     VE       + I K     + 
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
            ++ +I+G CK+  L  A++L   +     + +V T+ I+I  LC   ++ +A  L   M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              G +P+ V ++T++ G  +  +     EL   M+ RN
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 116/231 (50%), Gaps = 9/231 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V T S ++ GL    HT  A+ LF+ M          C  DA+IY  +++G+ + 
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARA 478

Query: 74  GFVDKAKELLLQM---KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
              +KA  +L Q+   +D+  NP     ++++   C    +++AK+L  +M ++G    V
Sbjct: 479 SKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAV 538

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +++ ++  L +  + +EA+Q+ E M+  G  P     N ++   C   +V+ A EL   
Sbjct: 539 SSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 598

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           M  +GC  ++ + + LI GYCK+   + A  L  EM   G++P   T++ L
Sbjct: 599 MSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 109/205 (53%), Gaps = 5/205 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING-NGEFGVVCKPDAV 61
           A  LF  + A GC  + + Y+ ++ G+ R      AL + E++I+  + +F     P + 
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF----NPSSS 504

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ LC+ G  D AK+LL +M ++     V +YN ++ G       +EA ++F  M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P + T +V++  LC   K+++A +L++ M ++G  P+    NTL+ G+C +GR 
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 624

Query: 182 NRAKELFVSMESMGCKHNVFSYSIL 206
           + A++L   M   G + N  ++ +L
Sbjct: 625 DLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 213/400 (53%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   G +PNV TY  LI+G C++G   VA   F+EM+      G    P+ V
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML------GCGIAPNDV 587

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + T +IDG CKEG   +A  +   M  ++++PDV TY+++I G         A  L  E 
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P+V T++ I+   CK G + +A QL E M Q G+ PN   YN L++G C  G +
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA+ELF  +   G  HN  +Y+ +I+GYCK+  +  A  L+ EM  KG+ P    Y+ L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    E+A  LF E  + G A+ T +    +DG CK+G ++EA +L   +     
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LID  CK+G LK A + F  + +  L+ + +TY  ++      G+  +   
Sbjct: 827 KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M AK + PD V ++ ++   ++  +  K ++L+  M
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDM 926



 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 212/397 (53%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ + G +P  + Y+ LI+G  R G +  A  + EEM+      GV  K +  
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEML----ARGV--KLNLF 377

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G+CK G ++KA  LL +M    I PD  TYN++I G+    +++  K L  EM
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P   T  +I++ LC++G +E+AS++ E+M+ +GV+PNA +Y TL+ G    GR 
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M+  G + +V  Y+ +I G CK++++E A     EM+ +G+KP V TY  L
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A + F EM   G+A +       IDG CK G   EA  +FR +     
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+R+YS LI GL ++G+L+ A EL        L+ DV TYN +I   C  G + KA  
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   M  KG++P+ + +N L+ G  +  E  +  EL 
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELF 714



 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 209/413 (50%), Gaps = 44/413 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L +++K     P   T   +INGLCR G    A  +FE M++     GV  KP+AVIYTT
Sbjct: 433 LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS----LGV--KPNAVIYTT 486

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  +EG   +A  +L  M  K + PDV+ YNSVI G C +    EAK   +EM+++G
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++PNV T+  ++   CK+G+M+ A +  + M+  G+ PN  V   L+DG+C  G    A 
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML------------------ 227
            +F  M       +V +YS LI+G  +N +++GA+ L SE L                  
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGF 666

Query: 228 -----------------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                             KGI P ++TYN L  GL +  ++ERA +LFD +   G+A + 
Sbjct: 667 CKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNA 726

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-H 329
             Y T IDG CK+G + +A  LF  + +     D   YS LIDG  K G  + A  LF  
Sbjct: 727 VTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE 786

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           S+ +G   A   + N ++   C  GK+ +A+ L  DM  K V PD V +  L+
Sbjct: 787 SVQKG--FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837



 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 213/432 (49%), Gaps = 41/432 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ A G + N+ TY+ L+ G+C+ G    A  L  EMI       V  KPD  
Sbjct: 359 EAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM------VGIKPDTQ 412

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G  KE    + K+LL +MK  N+ P   T   +I G C      +A R+F  M
Sbjct: 413 TYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIM 472

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PN V ++ ++    + G+ +EA ++L++M + GV+P+   YN+++ G C + ++
Sbjct: 473 VSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKM 532

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT------- 234
             AK+  V M   G K NV++Y  LI+GYCK+ E++ A   + EML  GI P        
Sbjct: 533 EEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 235 ----------------------------VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                       V TY+ L  GL    +++ A +L  E    G+
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D + Y + I G CK G I +A +L   +       +I +Y+ LI+GLCK+G ++ A E
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  +P   L  + VTY  +I   C  G + KA  LF +M  KGV PD   ++ L+ GC 
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772

Query: 387 RNNETSKVVELL 398
           +   T K + L 
Sbjct: 773 KEGNTEKALSLF 784



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 214/440 (48%), Gaps = 45/440 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  +++  GC P+++TY+ +I GLCR G    A  L + M     + G+V   D  
Sbjct: 254 EGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM----DKKGLVA--DVF 307

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K+    +AK +L +M  K + P  V Y ++I GF    DS EA R+  EM
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+ N+ T++ ++  +CK G ME+A  LL  MI +G++P+   YN +++G+      
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNT 427

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R K+L   M+        ++  ++ING C++  IE A  ++  M+S G+KP  V Y TL
Sbjct: 428 SRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTL 487

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-------GYIVEALELFR 294
             G  +  + + A ++   M + GV  D   Y + I GLCK+        Y+VE +E  R
Sbjct: 488 IKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE--R 545

Query: 295 TLR----------------------------ILKCELDIRSYSC--LIDGLCKSGRLKIA 324
            L+                            +L C +      C  LIDG CK G    A
Sbjct: 546 GLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +F  +    +  DV TY+ +IH L  +GK+  A +L  +   KG+ PD   +N+++ G
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISG 665

Query: 385 CIRNNETSKVVELLHRMDER 404
             +     K  +L   M ++
Sbjct: 666 FCKQGGIGKAFQLHEYMCQK 685



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 201/423 (47%), Gaps = 43/423 (10%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V TY+ LIN   R G+      L  EM     E G  C P  V Y  +I GLC+ G VD
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEM----EEKG--CSPSLVTYNVVIGGLCRAGEVD 288

Query: 78  KAKEL-----------------------------------LLQMKDKNINPDVVTYNSVI 102
           +A EL                                   L +M  K + P  V Y ++I
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            GF    DS EA R+  EM+ +GV+ N+ T++ ++  +CK G ME+A  LL  MI +G++
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   YN +++G+      +R K+L   M+        ++  ++ING C++  IE A  +
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M+S G+KP  V Y TL  G  +  + + A ++   M + GV  D   Y + I GLCK
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVV 341
           +  + EA +    +     + ++ +Y  LI G CKSG +++A   F   L  G+   DVV
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVV 588

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +I   C +G   +A  +F  M  + V PD   ++ L+ G +RN +    +ELL   
Sbjct: 589 C-TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 402 DER 404
            E+
Sbjct: 648 LEK 650



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 6/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F   K  G    ++  + L++ L +       L LF    NG  E  V+   D  
Sbjct: 184 EAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANK----LELFWRFYNGMLEANVL--HDVY 237

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+   + G   + K LL +M++K  +P +VTYN VI G C A + +EA  L   M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  +V T+S+++D   K  +  EA  +LE M   G++P    Y  L+DGF   G  
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G K N+F+Y+ L+ G CK  ++E A +L +EM+  GIKP   TYN +
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +     R   L  EM++  +    +     I+GLC++G I +A  +F  +  L  
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +   Y+ LI G  + GR + A  +   + +  +  DV+ YN +I  LC   KM++A D
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
             ++M  +G+ P+   +  L+ G  ++ E
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGE 566



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 191/417 (45%), Gaps = 44/417 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ++F  +      P+V TYS LI+GL R G    A+ L  E +    E G+V  PD  
Sbjct: 604  EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL----EKGLV--PDVF 657

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y +II G CK+G + KA +L   M  K I+P+++TYN++I G C A +   A+ LF  +
Sbjct: 658  TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY------------- 168
              +G+  N VT++ I+D  CK+G + +A +L + M   GV P++FVY             
Sbjct: 718  PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNT 777

Query: 169  ---------------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                                 N LMDGFC +G+V  A +L   M     K +  +Y+ILI
Sbjct: 778  EKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837

Query: 208  NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            + +CK   ++ A   + +M  + + P  +TY  L  G     +    F LFDEM    + 
Sbjct: 838  DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIE 897

Query: 268  ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAW 325
             D   +   ID   K G  V+ L+L   +  LK   ++    C  LID LC+   +    
Sbjct: 898  PDGVTWSVMIDAHLKEGDHVKTLKLVDDM--LKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955

Query: 326  ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            ++   +    L   + T + ++      GKMD A  +   M      PD    N L+
Sbjct: 956  KVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 174/353 (49%), Gaps = 7/353 (1%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            G  PN+ITY+ LINGLC+ G    A  LF+  I G G        +AV Y TIIDG CK 
Sbjct: 686  GISPNIITYNALINGLCKAGEIERARELFDG-IPGKG-----LAHNAVTYATIIDGYCKS 739

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            G + KA  L  +M  K + PD   Y+++I G     ++ +A  LF+E + +G   +  + 
Sbjct: 740  GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSL 798

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            + +MD  CK+GK+ EA+QLLE M+   V+P+   Y  L+D  C TG +  A++ FV M+ 
Sbjct: 799  NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                 N  +Y+ L++GY          +L+ EM++K I+P  VT++ +     +     +
Sbjct: 859  RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVK 918

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              KL D+M + G           ID LC+  ++ E L++   +      L + + S L+ 
Sbjct: 919  TLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVR 978

Query: 314  GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
               K+G++  A  +  S+ R   + D    N +I+        + A D    M
Sbjct: 979  CFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 168/345 (48%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V++  +IDG  K+G  D+A    L  K       ++  N ++     AN      R + 
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M++  V  +V T++ +++   + G  +E  +LL  M + G  P+   YN ++ G C  G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A EL   M+  G   +VF+YSILI+G+ K K    A  +  EM SKG+KP  V Y 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G         AF++ +EM   GV  + + Y   + G+CK G + +A  L   + ++
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D ++Y+ +I+G  K        +L   + +  L+    T  ++I+ LC  G ++ A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +F  M + GV P+ V + TL+ G ++     + V +L  MD++
Sbjct: 466 SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 12/281 (4%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY-----NTLMDGFCLTGRVNRAK 185
           V F +++D   K G  +EA         +G + N FV      N L+       ++    
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFF-----LGAKRNGFVVGLLCCNGLLSDLLKANKLELFW 221

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             +  M      H+V++Y+ LIN + +    +    L  EM  KG  P++VTYN +  GL
Sbjct: 222 RFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGL 281

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               +V+ AF+L   M + G+ AD + Y   IDG  K     EA  +   +     +   
Sbjct: 282 CRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGH 341

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +Y+ LIDG  + G    A+ +    L RGV + ++ TYN ++  +C  G M+KA  L  
Sbjct: 342 VAYTALIDGFMRQGDSGEAFRVKEEMLARGVKL-NLFTYNALVKGVCKFGDMEKADALLN 400

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +M   G+ PD   +N ++ G ++   TS+V +LL  M + N
Sbjct: 401 EMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 6/191 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +     +P+ +TY+ LI+  C+TG    A   F +M   N        P+A
Sbjct: 812 IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN------LMPNA 865

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT ++ G    G   +   L  +M  K+I PD VT++ +I       D  +  +L  +
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDD 925

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G   +     V++D LC+   + E  ++LE + + G+  +    +TL+  F   G+
Sbjct: 926 MLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985

Query: 181 VNRAKELFVSM 191
           ++ A  +  SM
Sbjct: 986 MDGAARVLKSM 996


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 211/393 (53%), Gaps = 9/393 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            C P+V+ YST+I+G    G T  A +LF EM       GV  KPD V Y  IID LCK 
Sbjct: 260 ACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ----GV--KPDVVTYNLIIDALCKA 313

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +DKA+ +L QM      PD VTY+ +I G+       EA ++F EM  +G+ PN+VT 
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTC 373

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +  +  LCK+G+ +EA++  + M   G +P+ F Y TL+ G+   G       LF SM+S
Sbjct: 374 NSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKS 433

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N   ++ILI+ Y K   ++ A+ +++EM  +G+ P VVTY+T+      + ++  
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTD 493

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK--CELDIRSYSCL 311
           A + F++M   G+  +T  Y + I G C +G +V+A EL   + I K     DI  +S +
Sbjct: 494 AMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM-INKGIPRPDIVFFSSV 552

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+ LCK GR+  A ++F           V+T+N +I   C  GKMDKA  +   ME  GV
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            PD V +NTL+ G  +N   +  + L   M  +
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 222/433 (51%), Gaps = 30/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EAA  F  + A G +P++ +Y TL++G    G     + LF  M               I
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G+V                PD V Y+T+I    + G +  A E   QM  + I 
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+   Y+S+I+GFC      +AK L  EM+++G+ +P++V FS +++ LCK+G++ +A  
Sbjct: 508 PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHD 567

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +L   IG RP    +N+L+DG+CL G++++A ++  +ME +G + ++ +Y+ L++GY 
Sbjct: 568 IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  I   L+L+ EM  KG+KP  VTY  +  GLF   +   A K F EM   G      
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    EA+ LF+ L  +  +  I   + +I+ + K  R + A ELF ++
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +  TY +MI  L  DG ++ A+++F  ME  G+ P     N ++   +   E 
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807

Query: 392 SKVVELLHRMDER 404
           +K    L ++D +
Sbjct: 808 AKAGNYLSKVDGK 820



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G +P+V+TY+ +I+ LC+      A  +  +M     +      PD V
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ------PDTV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I G    G + +A ++  +MK + + P++VT NS +   C    S EA   F  M
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P++ ++  ++      G   +   L   M   G+  N  V+  L+  +   G V
Sbjct: 397 TAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMV 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  M+  G   +V +YS +I+ + +   +  A+  +++M+++GI+P    Y+++
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM   G+   D   + + I+ LCK+G +++A ++F     + 
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIG 576

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +++ LIDG C  G++  A+++  ++    +  D+VTYN ++     +G+++   
Sbjct: 577 ERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGL 636

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M+ KGV P+ V +  ++ G  R   T    +  H M E
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 3/268 (1%)

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E   Q   P   T++++MD  C+  + +    L   +++ G++ +    NTL+   C   
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206

Query: 180 RVNRAKELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPTVV 236
           R   A  + +  M  +GC  N  SYSI++   C N   + AL L   M  +G    P VV
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            Y+T+  G F   +  +A  LF EM R GV  D   Y   ID LCK   + +A  + R +
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D  +YSC+I G    GRLK A ++F  + +  LI ++VT N  + +LC  G+ 
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +A + F  M AKG  PD  ++ TL+ G
Sbjct: 387 KEAAEFFDSMTAKGHKPDIFSYCTLLHG 414



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 38/350 (10%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA-SQ 151
           P   TYN ++   C A   +    LF  ++  G++ + +T + ++  LC   + EEA + 
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILING 209
           LL  M ++G  PNA  Y+ ++   C      RA +L   M   G  C  +V +YS +I+G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE---------------------- 247
           +    E   A SL+ EM  +G+KP VVTYN +   L +                      
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 248 -------IH------QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
                  IH      +++ A K+F EM++ G+  +     +F+  LCK+G   EA E F 
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           ++     + DI SY  L+ G    G       LF+S+    + A+   + I+IHA    G
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +D A  +F +M+ +GV+PD V ++T++    R    +  +E  ++M  R
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F      G  P VIT+++LI+G C  G    A  + + M        V  +PD 
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV------VGVEPDI 616

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++DG  K G ++    L  +M+ K + P+ VTY  ++ G   A  +  A++ F E
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G    V  + +I+  LC+N   +EA  L + +  + V+ +  + NT+++      R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AKELF ++ + G   N  +Y ++I    K+  +E A +++S M   GI P     N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 797 IIRMLLEKGEIAKA 810


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/406 (34%), Positives = 221/406 (54%), Gaps = 9/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G EPNV+ YS+L+ G C++G       +F EM     E G+  +PD V
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM----SEKGI--EPDVV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +ID LCK G   KA  ++  M  + + P+VVTYN +I   C      EA  +  +M
Sbjct: 222 MYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDGFCLTG 179
            ++GV P+VVT++ ++  L    +M+EA  LLE M++    V+PN   +N+++ G C  G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+ +A ++   ME  GC  N+ +Y++LI G  +  ++  A+ L  EM S G++P   TY+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  ++ QV+RA  L   M+  G+  + + Y   +  +C+ G +  A  LF  +   
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD+ +YS +I G CK+G LK A EL  S+    L  D VTY+I+I+     G M+ A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +   M A G  PD   F++L+ G     E +KV+EL+  M  +N
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 212/403 (52%), Gaps = 8/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   L +     + ++Y+T++  LCR GH   A  L   M   + E    C+P+AV
Sbjct: 63  EATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAM---SLEPHPACRPNAV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++  LC +   D+A  LL  M+   +  DVVTY ++IRG C A + ++A  L  EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PNVV +S ++   CK+G+ E+  ++   M + G+ P+  +Y  L+D  C  G+ 
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +   M   G + NV +Y++LIN  CK   ++ A+ +  +M  KG+ P VVTYNTL
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             GL ++ +++ A  L +EM R    V  +   + + I GLC  G + +A ++   +   
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C +++ +Y+ LI GL +  +++ A EL   +    L  D  TY+I+I   C   ++D+A
Sbjct: 357 GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRA 416

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            DL   M  +G+ P+   +  L++         +   L + MD
Sbjct: 417 EDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 211/399 (52%), Gaps = 9/399 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   +F ++   G EP+V+ Y+ LI+ LC+ G    A  + + M+    E      P+ V
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ +CKEG V +A  +L +M +K + PDVVTYN++I+G     + +EA  L  EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +     V+PNVVTF+ ++  LC  G+M +A Q+  +M + G   N   YN L+ G     
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V +A EL   M S+G + + F+YSILI G+CK  +++ A  L S M  +GI+P +  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L + + E   +ERA  LF+EM  +    D  AY T I G CK G +  A EL +++   
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +YS +I+   KSG ++ A  +   +     + DV  ++ +I      G+++K 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +L  +M  K +A D    +TL    + +NE   +++ L
Sbjct: 556 LELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM---LSKGIKPTVVTYNTLFIGLFE 247
           ++++    +  SY+ ++   C+    + A +L   M        +P  V+Y  L   L  
Sbjct: 68  LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
               ++A  L   M+  GV AD   Y T I GLC    + +A+EL   +     E ++  
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           YS L+ G CKSGR +   ++F  +    +  DVV Y  +I +LC  GK  KAH +   M 
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +G+ P+ V +N L+    +     + + +L +M E+
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 226/470 (48%), Gaps = 76/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + +++  +   P+V TY++LI G CR  +  +A  +F+ M+         C P++V
Sbjct: 258 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG------CDPNSV 311

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG VD+A ++L +M +K I P V TY   I   C      EA  L   M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PNV T++ ++  L + GK+E A  L   M++ G+ PN   YN L++  C+ GR 
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  ME  G   N  +Y+ +I G C   +IE A+ L+ +ML  G  PTVVTYNTL
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW------------------------------ 271
             G      V  A +L D M+ +G   D W                              
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 272 -----AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS------------------- 307
                +Y T IDG  K+G +  AL L   +  + C  ++ S                   
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611

Query: 308 ----------------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
                           Y+ LIDGLC++GR + A+++FH + +   + ++ TY+ +I+ LC
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +GK D+A  L  +ME KG+APD V F +L+ G +          LL RM
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 6/379 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K  GC PNV TY+ LI+GL R G   VA+ L+ +M+      G+V  P+ V Y  
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 420

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ LC  G    A ++   M+      +  TYN +I+G C   D  +A  LF +M+  G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P VVT++ +++     G +  A++LL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P V +YN +  GL
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   KC  ++
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS LI GLC+ G+   A  L   + R  L  D VT+  +I      G++D A  L   
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M   G  P+   ++ L+ G
Sbjct: 721 MVDVGCKPNYRTYSVLLKG 739



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 214/427 (50%), Gaps = 30/427 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA L   +K  GCEP+  TY+ L++G  + G    A   F+EM+    E G+   P+ V 
Sbjct: 504 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVS 557

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+IDG  K+G VD A  LL +M++   NP+V +YN+VI G    N  +EA+++  +M 
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+ PNV+T++ ++D LC+NG+ + A ++   M +    PN + Y++L+ G C  G+ +
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ L   ME  G   +  +++ LI+G+     I+ A  L   M+  G KP   TY+ L 
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737

Query: 243 IGL--------------------FEIHQVERAFK----LFDEMQRHGVAADTWAYRTFID 278
            GL                    F  H+ +  F+    L   M   G       Y T + 
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC+ G   EA +L + ++      D   Y  L+   CK+  +  A ++FHS+       
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +  Y  +I ALC  G++++A  LF +M  K    D + +  L+ G ++  E    ++LL
Sbjct: 858 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 917

Query: 399 HRMDERN 405
           H M+ +N
Sbjct: 918 HIMESKN 924



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 210/426 (49%), Gaps = 30/426 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  ++  G   N  TY+ +I GLC  G    A+ LFE+M+    + G +  P  V 
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML----KMGPL--PTVVT 487

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G   +G V+ A  LL  MK+    PD  TYN ++ GF        A   F EM+
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN V+++ ++D   K+GK++ A  LLE M ++G  PN   YN +++G     R +
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++   M   G   NV +Y+ LI+G C+N   + A  ++ +M  +   P + TY++L 
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A  L  EM+R G+A D   + + IDG    G I  A  L R +  + C+
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727

Query: 303 LDIRSYSCLIDGLCK-----SGRLKIAWELFHS----------------LPRGVLIA--- 338
            + R+YS L+ GL K       ++ +  E  +S                L R   I    
Sbjct: 728 PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEP 787

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            + TY+ ++  LC  G+  +A  L  DM+ +G  PD   + +L++   +N E    +++ 
Sbjct: 788 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 847

Query: 399 HRMDER 404
           H ++ +
Sbjct: 848 HSIEAK 853



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 167/344 (48%), Gaps = 32/344 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K+   G  PNVITY+TLI+GLCR G T  A  +F +M          C P+  
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLY 661

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GLC+EG  D+A+ LL +M+ K + PD VT+ S+I GF      + A  L   M
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721

Query: 122 MDQGVQPNVVTFSVIMDEL---C---------------------KNGKMEEASQLLELMI 157
           +D G +PN  T+SV++  L   C                     K+   E  S LL  M 
Sbjct: 722 VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS 781

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEI 216
           +IG  P    Y+TL+ G C  GR   A++L   M+  G C      YS+LI  +CKN E+
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI-AHCKNLEV 840

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL ++  + +KG +  +  Y  L   L +  QVE A  LFD M      AD   +   
Sbjct: 841 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           +DGL K G +   ++L   +       +I++Y  L   L + G+
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 191/411 (46%), Gaps = 44/411 (10%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT--TIIDGLCKEGFVDKAKELLLQMK 87
           CR    I  +  F   I+G G FG        +Y+  T++  L K   V+ A+ L  QM 
Sbjct: 180 CRNEEEIRRVADFLNEISGMG-FGFS------LYSCNTLLIQLAKFEMVEGARNLYKQML 232

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           +  I P ++T+N++I          EA+ +  ++    + P+V T++ ++   C+N  ++
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 292

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE--------------------- 186
            A  + + M++ G  PN+  Y+TL++G C  GRV+ A +                     
Sbjct: 293 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352

Query: 187 --------------LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                         L   M+  GC+ NV +Y+ LI+G  +  ++E A+ LY +ML +G+ 
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VTYN L   L    +   A K+F  M+ HG  A+T  Y   I GLC  G I +A+ L
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +  +     + +Y+ LI+G    G +  A  L   +       D  TYN ++     
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            GK++ A   F +M   G+ P+ V++ TL+ G  ++ +    + LL RM+E
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 46/368 (12%)

Query: 80  KELLLQMKDKNINPDVVTYN---SVIRGFCYANDSNEAKR---LFIEMMDQGVQPNVVT- 132
           K+L  Q+K  ++   V  +    SVI+ F + +     K     FI M+++ V+  V   
Sbjct: 109 KQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAP 168

Query: 133 ---FSVIMDELCKNGK-MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
                ++M + C+N + +   +  L  +  +G   + +  NTL+        V  A+ L+
Sbjct: 169 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY 228

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M + G + ++ +++ LIN   K  ++  A  + S++    + P V TY +L +G    
Sbjct: 229 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------------ 296
             ++ AF +FD M + G   ++  Y T I+GLC  G + EAL++   +            
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348

Query: 297 ---------------------RILK--CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                                R+ K  C  ++++Y+ LI GL + G+L++A  L+H + +
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             L+ + VTYN +I+ LC  G+   A  +F  ME  G   +   +N ++ G     +  K
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468

Query: 394 VVELLHRM 401
            + L  +M
Sbjct: 469 AMVLFEKM 476



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 40/222 (18%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPTVVTYNTLF 242
           F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G   ++ + NTL 
Sbjct: 153 FISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 212

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           I L +   VE A  L+ +M   G+      + T                           
Sbjct: 213 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNT--------------------------- 245

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                   LI+ L K G+++ A  +   + +  L  DV TY  +I   C +  +D A  +
Sbjct: 246 --------LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 297

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  +G  P+ V ++TL+ G        + +++L  M E+
Sbjct: 298 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 339


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 217/400 (54%), Gaps = 7/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+   ++TLIN   R G    +L +FE+M       GV   PD + ++T
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFST 439

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I   C+ G +D A E    M D  + PD   Y+ +I+G C   D  +AK L  +M+ +G
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499

Query: 126 VQPNVVTF-SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  + F + I++ LCK G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 559

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  SMES+G + ++++Y+ L++GYCK+  I+ AL+L+ +ML K +  T V+YN +  G
Sbjct: 560 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 619

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A ++F EM   G+A     Y T + GLC+N    EA  L   L  +  + D
Sbjct: 620 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 679

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+  ++TY +MI  L  +   + A +LF 
Sbjct: 680 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 739

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ME     PD    N ++   +   E +K    L ++D++
Sbjct: 740 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 205/406 (50%), Gaps = 12/406 (2%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKP 58
           A  LF ++    C    P + TY+ LIN   R     + L +F  ++  G G       P
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 222

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y  +IDG  KEG VDKA +L  +M+++ I P+VVTY+S+I G C   + ++A+R+ 
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 282

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GV+PN +T++ ++     +G  +E+ ++ + M    + P+    N+ M   C  
Sbjct: 283 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 342

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR+  A+++F SM   G K +V SY  L++GY     I G  +L++ M+ +G+ P    +
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL      +  ++++  +F++M + GV  D   + T I   C+ G + +A+E F  +  
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                D   YSCLI G C    L  A EL    L +G+    +  +  +I+ LC +G++ 
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  D+   +   G  P+ + FN+L+ G        + V LL  M+ 
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 568



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 208/436 (47%), Gaps = 42/436 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K++  G  PNV+TYS+LINGLC+T     A  +  +M+      G   +P+ +
Sbjct: 242 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV------GAGVRPNNM 295

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y  +I G                                   LCK G + +A+++   M
Sbjct: 296 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             K   PDV++Y +++ G+  A        LF  M+ +GV P+   F+ +++   + G M
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +++  + E M + GV P+   ++T++  FC  GR++ A E F  M   G   +   YS L
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI-GLFEIHQVERAFKLFDEMQRHG 265
           I G C  +++  A  L S+MLSKGI P  + + T  I  L +  +V     + D +   G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   + + +DG C  G + EA+ L  ++  +  E DI +Y+ L+DG CK GR+  A 
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +    +    V+YNI++H L    +   A ++F +M   G+A     + T++ G 
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655

Query: 386 IRNNETSKVVELLHRM 401
            RNN T +   LL ++
Sbjct: 656 CRNNCTDEANMLLEKL 671



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 4/351 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I+   +    D    +  ++    + PDV +YN++I GF    + ++A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M +QG+ PNVVT+S +++ LCK  +M++A ++L  M+  GVRPN   YN L+ G+  
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G    +  +F  M S     +V + +  +   CK+  I+ A  ++  M+ KG KP V++
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G      +     LF+ M   GV  D   + T I+   + G + ++L +F  + 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DI ++S +I   C+ GRL  A E F+ +    +  D   Y+ +I   C    + 
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELLHRMDER 404
           KA +L  DM +KG+ P C+ F T ++  +    R  E   VV+L+    +R
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 537



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 171/354 (48%), Gaps = 5/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G  P+   YS LI G C     + A  L  +M++       +  P   
Sbjct: 452 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIK 506

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T+II+ LCKEG V + K+++  +      P+++T+NS++ G+C   +  EA  L   M
Sbjct: 507 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 566

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV+P++ T++ ++D  CK+G++++A  L   M+   V   +  YN ++ G     R 
Sbjct: 567 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 626

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKE+F  M   G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K  ++T+N +
Sbjct: 627 IVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV 686

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              +F++ + + A +LF  +  +G+      YR  I  L K     +A  LF ++    C
Sbjct: 687 IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSC 746

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             D R  + +I  L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 747 TPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 10/288 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+IT+++L++G C  G+   A+ L + M +      V  +PD   Y T++DG CK 
Sbjct: 535 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 588

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A  L   M  K +    V+YN ++ G   A  +  AK +F EM++ G+  ++ T+
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 648

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC+N   +EA+ LLE +  + V+ +   +N ++      GR   AKELF ++ +
Sbjct: 649 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 708

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M      P     N +   L    +V +
Sbjct: 709 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 768

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEALELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 769 AGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 816


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 217/400 (54%), Gaps = 8/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+ A GC P + TY+ L+NGLC+ G    A++L  ++++ NG     C PD V
Sbjct: 52  EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 105

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDGL K+    +A +L  +M  + +  D V Y ++IRG   A    +A  ++  M
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P+VVT S ++D LCK G++  A ++ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 166 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 225

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++  A + + EML  G KP V TYN L
Sbjct: 226 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL 285

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    + A  +FD+M     + +   Y T I GLCK   + +A   ++ ++   C
Sbjct: 286 ISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   YS L+DGLCKSG+L+    LF  + R   +A+  T   +I  LC   ++D+A  
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVS 404

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  +  +G+ P   A+N+++   I++ + ++   +   M
Sbjct: 405 LFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 190/372 (51%), Gaps = 6/372 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A +L  +    GC  ++ TY+T+++ L +      A+ L E+ I  NG     C P  
Sbjct: 16  IQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEK-ITANG-----CTPTI 69

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +++GLCK G +++A +LL ++ D    PDVVTY S+I G      S EA +LF E
Sbjct: 70  ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+  + V ++ ++  L + GK+ +AS + + M   G  P+    +T++DG C  GR
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +F SME+ G   N   YS LI+G CK ++++ AL + ++M      P  +TYN 
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +   V  A   FDEM   G   D + Y   I G CK G    A  +F  +   +
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ +Y  LI GLCK  +L  A   +  +       D   Y+ ++  LC  GK++   
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 369

Query: 361 DLFLDMEAKGVA 372
            LF +ME  GVA
Sbjct: 370 MLFDEMERSGVA 381



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 194/383 (50%), Gaps = 6/383 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T+S LINGL + G  I A +L +E    NG     C  D   YTTI+D L K   + +A 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTT-NG-----CTIDIHTYTTIVDWLAKNKKIQEAV 54

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L+ ++      P + TYN+++ G C      EA  L  +++D G  P+VVT++ ++D L
Sbjct: 55  ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 114

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            K  +  EA +L + M   G+  +   Y  L+ G    G++ +A  ++ +M S GC  +V
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            + S +I+G CK   I  A+ ++  M ++G+ P  V Y+ L  GL +  +++ A ++  +
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M++     DT  Y   IDGLCK+G +  A   F  +    C+ D+ +Y+ LI G CK+G 
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
              A  +F  +       +VVTY  +I  LC   ++ KA   +  M+ +G  PD   +++
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G  ++ +      L   M+ 
Sbjct: 355 LVDGLCKSGKLEGGCMLFDEMER 377



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 168/342 (49%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++ +I+GL K G + +A  L  +        D+ TY +++          EA  L  ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P + T++ +++ LCK G++EEA  LL  ++  G  P+   Y +L+DG     R  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  M S G   +   Y+ LI G  +  +I  A S+Y  M S+G  P VVT +T+ 
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  ++  A ++F  M+  G+A +   Y   I GLCK   +  ALE+   ++   C 
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LIDGLCKSG +  A   F  +       DV TYNI+I   C  G  D A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F DM +   +P+ V + TL+ G  +  + +K       M ER
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 216/399 (54%), Gaps = 12/399 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE---EMINGNGEFGVVCKPDAVI 62
           L  ++ A GC PN++T+STLI  LCR G       LFE   E+     E G  C PD  +
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNG-------LFERVHEVHAQMAEHG--CAPDVRM 289

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG+CKE  ++ A+ +L +M    ++P+VV YN++++G C A+   EA+ L  EM 
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+    + VTF++++D LC+NG ++   ++LE M++ G  P+   Y T+++GFC  G ++
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L  SM + GC+ N  SY+I++ G C  +    A  L S+M+ +G  P  VT+NTL 
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   VE+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +      
Sbjct: 470 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMS 529

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   YS +   L   GR+    ++F ++    + +D V YN +I +LC  G+ D+A + 
Sbjct: 530 PNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEF 589

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M + G  P+   +  L+ G        +  E+L  +
Sbjct: 590 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 203/395 (51%), Gaps = 12/395 (3%)

Query: 10  LKAFGCEPNVITYSTLINGLC---RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           L +FGCEP+V++Y+ ++ GLC   R GH     +L EEM+         C P+ V ++T+
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHV---QDLMEEMVAAG------CPPNIVTFSTL 258

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I  LC+ G  ++  E+  QM +    PDV  Y ++I G C       A+ +   M   G+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            PNVV ++ ++  LC   + EEA  LL  M       +   +N L+D  C  G V+R  E
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +   M   GC  +V +Y+ +ING+CK   I+ A+ L   M + G +P  V+Y  +  GL 
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +  C  D+ 
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           SYS +IDGL K+G    A EL + + +  +  + + Y+ +  AL  +G+++K   +F ++
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   V  D V +N ++    +  ET + +E L  M
Sbjct: 559 QDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYM 593



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+   +   GC P    Y   +   CR      A+ +  ++ +G G     C  D  
Sbjct: 129 DALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL-HGRG-----CALDVG 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
               ++  +C +G VD+A  LL  +       PDVV+YN+V+RG C A      + L  E
Sbjct: 183 NCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEE 242

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  PN+VTFS ++  LC+NG  E   ++   M + G  P+  +Y T++DG C   R
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+ +   M S G   NV  Y+ L+ G C     E A  L +EM  K      VT+N 
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +   V+R  ++ ++M  HG   D   Y T I+G CK G I EA+ L R++    
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  SY+ ++ GLC + R   A EL   + +     + VT+N +I+ LC  G +++A 
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L   M   G +PD ++++T++ G  +   T + +ELL+ M
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P+V  Y+T+I+G+C+     VA  +   M +    +G+   P+ V Y T
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS----YGL--SPNVVCYNT 327

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC     ++A+ LL +M DK+   D VT+N ++   C     +    +  +M++ G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL  M   G RPN   Y  ++ G C   R   A+
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAE 447

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 448 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +    + A +L + M + G++ +T  Y +    L   G I + +++F  ++      D 
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK G    A E    +     + +  TY I+I  L ++G + +A ++  +
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTE 627

Query: 366 MEAKG 370
           + +KG
Sbjct: 628 LCSKG 632



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 146/295 (49%), Gaps = 6/295 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++    C  + +T++ L++ LC+ G     + + E+M+    E G  C PD +
Sbjct: 340 EAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQML----EHG--CMPDVI 393

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+G CKEG +D+A  LL  M      P+ V+Y  V++G C A    +A+ L  +M
Sbjct: 394 TYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN VTF+ +++ LCK G +E+A +LL+ M+  G  P+   Y+T++DG    G  
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   G   N   YS + +       I   + ++  +    ++   V YN +
Sbjct: 514 DEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAV 573

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
              L +  + +RA +    M   G   +   Y   I GL   G++ EA E+   L
Sbjct: 574 ISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 6/229 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + A GC PN ++Y+ ++ GLC     + A  L  +MI         C P+ V
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG------CPPNPV 463

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I+ LCK+G V++A ELL QM     +PD+++Y++VI G   A +++EA  L   M
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ PN + +S I   L   G++ +  Q+ E +    VR +A +YN ++   C  G  
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGET 583

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +RA E    M S GC  N  +Y+ILI G      ++ A  + +E+ SKG
Sbjct: 584 DRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 4/307 (1%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN+++ G+C A     A+RL   +    V PN  T+  ++  LC  G++ +A  +L+ M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G  P   +Y+  ++  C       A  +   +   GC  +V + ++++   C    ++
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 218 GALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A+ L  ++L S G +P VV+YN +  GL    +      L +EM   G   +   + T 
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I  LC+NG      E+   +    C  D+R Y+ +IDG+CK  RL++A  + + +P   L
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             +VV YN ++  LC+  + ++A  L  +M  K    D V FN L+    +N    +V+E
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 397 LLHRMDE 403
           +L +M E
Sbjct: 379 VLEQMLE 385



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 444 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 496

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  D+A ELL  M  K ++P+ + Y+S+          N+  ++F 
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ + V ++ ++  LCK G+ + A + L  M+  G  PN   Y  L+ G    G
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEG 616

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 617 FVKEAQEILTELCSKGALRKHLMKHFGIV 645


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 217/402 (53%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GC  N + Y T++ G    G    A  LF+EM+        +C PD   
Sbjct: 244 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC-----CLC-PDVTT 297

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++  LCK+GFV +++ L  ++  + + P++ T+N  I+G C     + A RL   + 
Sbjct: 298 FNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVS 357

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P+VVT++ ++  LC+  ++ EA + L  M+  G  PN F YN+++DG+C  G V 
Sbjct: 358 REGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVV 417

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +       G K + F+Y  L+NG+C++ + + A++++ + L KG++P+++ YNTL 
Sbjct: 418 DANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLI 477

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A +L +EM   G   D W Y   I+GLCK G + +A  L        C 
Sbjct: 478 KGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI 537

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +Y+ L+DG C+  +L  A EL + +    +  DV+TYN +++ LC   K ++  ++
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  KG AP+ + +NT++     + + ++ V+LL  M  +
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSK 639



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 215/388 (55%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V T++ L++ LC+ G  + +  LF++++        VC P+   +   I GLCKEG +
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRG-----VC-PNLFTFNIFIQGLCKEGSL 346

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  LL  +  + + PDVVTYN+VI G C  +   EA+    +M++ G +PN  T++ I
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK G + +A+++L+  +  G +P+ F Y +L++GFC  G  ++A  +F      G 
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + ++  Y+ LI G C+   I  AL L +EM  KG KP + TYN +  GL ++  +  A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  +    G   D + Y T +DG C+   +  A+EL   +       D+ +Y+ L++GLC
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+ + +   E+F ++       +++TYN +I +LC   K+++A DL  +M++KG+ PD V
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F TL+ G  +  +      L   M+++
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGMEKQ 674



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 207/420 (49%), Gaps = 42/420 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL------------------- 41
           +E+  LF K+   G  PN+ T++  I GLC+ G    A+ L                   
Sbjct: 312 LESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTV 371

Query: 42  ----------------FEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
                             +M+NG  E      P+   Y +IIDG CK+G V  A  +L  
Sbjct: 372 ICGLCRKSRVVEAEECLHKMVNGGFE------PNDFTYNSIIDGYCKKGMVVDANRILKD 425

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
              K   PD  TY S++ GFC   D ++A  +F + + +G++P+++ ++ ++  LC+ G 
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +  A QL+  M + G +P+ + YN +++G C  G ++ A  L     + GC  ++F+Y+ 
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++GYC+  +++ A+ L + M S+G+ P V+TYNTL  GL +  + E   ++F  M   G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
            A +   Y T I+ LC +  + EA++L   ++      D+ S+  LI G CK G L  A+
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665

Query: 326 ELFHSLPRGVLIADVV-TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            LF  + +   ++    TYNI+I A      M  A  LF +M+  G  PD   +  L+ G
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDG 725



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 208/388 (53%), Gaps = 11/388 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+  TY +L+NG C+ G    A+ +F++ +      G   +P  ++Y T+I GLC++
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL------GKGLRPSIIVYNTLIKGLCQQ 483

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +  A +L+ +M +K   PD+ TYN +I G C     ++A  L  + + +G  P++ T+
Sbjct: 484 GLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTY 543

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C+  K++ A +L+  M   G+ P+   YNTL++G C T +     E+F +M  
Sbjct: 544 NTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE 603

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N+ +Y+ +I   C +K++  A+ L  EM SKG+ P VV++ TL  G  ++  ++ 
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDG 663

Query: 254 AFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A+ LF  M++ + V+  T  Y   I    +   +  AL LF  ++   C+ D  +Y  LI
Sbjct: 664 AYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLI 723

Query: 313 DGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           DG CK+G +   ++ L  ++ +G  I  + T+  +++ LC + K+ +A  +   M  K +
Sbjct: 724 DGFCKTGNVNQGYKFLLENIEKG-FIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDI 782

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLH 399
            PD V  NT+     + + T    E L+
Sbjct: 783 VPDTV--NTIFEADKKGHITYHAYEFLY 808



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 184/406 (45%), Gaps = 41/406 (10%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G    A++ FE M   N      C P    Y  I++ L + G+ ++A ++ ++MKDK 
Sbjct: 167 RKGKIQEAVDTFERMDLFN------CDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKK 220

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +  DV TY   I+ FC       A RL   M   G   N V +  ++    + G  + A 
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L + M++  + P+   +N L+   C  G V  ++ LF  +   G   N+F+++I I G 
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   ++ A+ L   +  +G++P VVTYNT+  GL    +V  A +   +M   G   + 
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 271 WAYRTFIDGLCKNGYIVEALEL--------FRTLRILKCEL------------------- 303
           + Y + IDG CK G +V+A  +        F+      C L                   
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 304 --------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                    I  Y+ LI GLC+ G +  A +L + +       D+ TYN++I+ LC  G 
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  A+ L  D   KG  PD   +NTL+ G  R  +    +EL++RM
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRM 566



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 7/291 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  ++   GC+P++ TY+ +INGLC+ G    A +L  + I         C PD 
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG------CIPDI 540

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++DG C++  +D A EL+ +M  + + PDV+TYN+++ G C    S E   +F  
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PN++T++ I++ LC + K+ EA  LL  M   G+ P+   + TL+ GFC  G 
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 181 VNRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ A  LF  ME      H   +Y+I+I+ + +   ++ AL L+SEM   G  P   TY 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            L  G  +   V + +K   E    G       +   ++ LC    + EA+
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 166/379 (43%), Gaps = 38/379 (10%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIE 120
           Y +++  L   G  ++ + LL +M+  N++  ++   Y   +R +       EA   F  
Sbjct: 122 YKSMLQKLGFHGKFNEMENLLSEMRS-NLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFER 180

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+V +++ IM+ L + G   +A ++   M    V  + + Y   +  FC TGR
Sbjct: 181 MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGR 240

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  L  +M  +GC  N  +Y  ++ G+ +  + + A  L+ EML   + P V T+N 
Sbjct: 241 PYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNK 300

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +   V  + +LFD++ + GV  + + +  FI GLCK G +  A+ L   +    
Sbjct: 301 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG 360

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI------------- 347
              D+ +Y+ +I GLC+  R+  A E  H +  G    +  TYN +I             
Sbjct: 361 LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDAN 420

Query: 348 ----------------------HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                                 +  C DG  D+A  +F D   KG+ P  + +NTL+ G 
Sbjct: 421 RILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGL 480

Query: 386 IRNNETSKVVELLHRMDER 404
            +       ++L++ M E+
Sbjct: 481 CQQGLILPALQLMNEMAEK 499



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 6/251 (2%)

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING- 209
           QL++   Q G +   F Y +++      G+ N  + L   M S     N     + +   
Sbjct: 106 QLIKKTKQ-GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN--LDNTLLEGVYVEAM 162

Query: 210 --YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             Y +  +I+ A+  +  M      P+V +YN +   L E     +A K++  M+   V 
Sbjct: 163 RFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVE 222

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           +D + Y   I   C+ G    AL L R + +L C  +  +Y  ++ G  + G    A EL
Sbjct: 223 SDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAREL 282

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +    L  DV T+N ++HALC  G + ++  LF  +  +GV P+   FN  + G  +
Sbjct: 283 FDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK 342

Query: 388 NNETSKVVELL 398
                + V LL
Sbjct: 343 EGSLDRAVRLL 353



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 5/178 (2%)

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL---CKNGY 285
           +G K T+ TY ++   L    +      L  EM+ +    +T     +++ +    + G 
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN--LDNTLLEGVYVEAMRFYGRKGK 170

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           I EA++ F  + +  C+  + SY+ +++ L + G    A +++  +    + +DV TY I
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            I + C  G+   A  L  +M   G   + VA+ T++ G     +  +  EL   M E
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 217/400 (54%), Gaps = 7/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+   ++TLIN   R G    +L +FE+M       GV   PD + ++T
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFST 368

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I   C+ G +D A E    M D  + PD   Y+ +I+G C   D  +AK L  +M+ +G
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428

Query: 126 VQPNVVTF-SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  + F + I++ LCK G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 488

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  SMES+G + ++++Y+ L++GYCK+  I+ AL+L+ +ML K +  T V+YN +  G
Sbjct: 489 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 548

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A ++F EM   G+A     Y T + GLC+N    EA  L   L  +  + D
Sbjct: 549 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 608

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+  ++TY +MI  L  +   + A +LF 
Sbjct: 609 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 668

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ME     PD    N ++   +   E +K    L ++D++
Sbjct: 669 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 205/406 (50%), Gaps = 12/406 (2%)

Query: 3   AAALFTKLKAFGCE---PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKP 58
           A  LF ++    C    P + TY+ LIN   R     + L +F  ++  G G       P
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 151

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y  +IDG  KEG VDKA +L  +M+++ I P+VVTY+S+I G C   + ++A+R+ 
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GV+PN +T++ ++     +G  +E+ ++ + M    + P+    N+ M   C  
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR+  A+++F SM   G K +V SY  L++GY     I G  +L++ M+ +G+ P    +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL      +  ++++  +F++M + GV  D   + T I   C+ G + +A+E F  +  
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                D   YSCLI G C    L  A EL    L +G+    +  +  +I+ LC +G++ 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  D+   +   G  P+ + FN+L+ G        + V LL  M+ 
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 497



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 208/436 (47%), Gaps = 42/436 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K++  G  PNV+TYS+LINGLC+T     A  +  +M+      G   +P+ +
Sbjct: 171 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV------GAGVRPNNM 224

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y  +I G                                   LCK G + +A+++   M
Sbjct: 225 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 284

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             K   PDV++Y +++ G+  A        LF  M+ +GV P+   F+ +++   + G M
Sbjct: 285 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 344

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +++  + E M + GV P+   ++T++  FC  GR++ A E F  M   G   +   YS L
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 404

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI-GLFEIHQVERAFKLFDEMQRHG 265
           I G C  +++  A  L S+MLSKGI P  + + T  I  L +  +V     + D +   G
Sbjct: 405 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   + + +DG C  G + EA+ L  ++  +  E DI +Y+ L+DG CK GR+  A 
Sbjct: 465 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 524

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +    +    V+YNI++H L    +   A ++F +M   G+A     + T++ G 
Sbjct: 525 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 584

Query: 386 IRNNETSKVVELLHRM 401
            RNN T +   LL ++
Sbjct: 585 CRNNCTDEANMLLEKL 600



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 4/351 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    Y  +I+   +    D    +  ++    + PDV +YN++I GF    + ++A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M +QG+ PNVVT+S +++ LCK  +M++A ++L  M+  GVRPN   YN L+ G+  
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G    +  +F  M S     +V + +  +   CK+  I+ A  ++  M+ KG KP V++
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G      +     LF+ M   GV  D   + T I+   + G + ++L +F  + 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DI ++S +I   C+ GRL  A E F+ +    +  D   Y+ +I   C    + 
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELLHRMDER 404
           KA +L  DM +KG+ P C+ F T ++  +    R  E   VV+L+    +R
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 466



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 171/354 (48%), Gaps = 5/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G  P+   YS LI G C     + A  L  +M++       +  P   
Sbjct: 381 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIK 435

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T+II+ LCKEG V + K+++  +      P+++T+NS++ G+C   +  EA  L   M
Sbjct: 436 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 495

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV+P++ T++ ++D  CK+G++++A  L   M+   V   +  YN ++ G     R 
Sbjct: 496 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 555

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKE+F  M   G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K  ++T+N +
Sbjct: 556 IVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV 615

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              +F++ + + A +LF  +  +G+      YR  I  L K     +A  LF ++    C
Sbjct: 616 IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSC 675

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             D R  + +I  L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 676 TPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 729



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 10/288 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+IT+++L++G C  G+   A+ L + M +      V  +PD   Y T++DG CK 
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 517

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A  L   M  K +    V+YN ++ G   A  +  AK +F EM++ G+  ++ T+
Sbjct: 518 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 577

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC+N   +EA+ LLE +  + V+ +   +N ++      GR   AKELF ++ +
Sbjct: 578 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 637

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M      P     N +   L    +V +
Sbjct: 638 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 697

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEALELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 698 AGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 745


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 7/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ ++Y  +INGLC      +A  L E+M           KP+ V+Y+T+I G   EG +
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASEGRI 201

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A+ LL  M    + PD+  YN++I     A    EA    +E+  +G++P+ VTF   
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K GKM EA++  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G 
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V + S  I+G  KN  ++ AL ++SE+  KG+ P V TY++L  G  +  +VE+AF+
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L DEM   G+A + + Y   +DGLCK+G I  A +LF  +     E D  +YS +IDG C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KS  +  A+ LFH +P   +      YN ++H  C +G M+KA +LF +M  KG A   +
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TL 500

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
           +FNTL+ G  ++ +  +  +L   M
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEM 525



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 203/391 (51%), Gaps = 6/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N+ITY+ LI+GLC+ G    A  + + MI       + CKP++  +  +I+G C+E
Sbjct: 75  GIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT------LGCKPNSRTFCLLIEGYCRE 128

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + +A ELL +M+ +N+ P  V+Y ++I G C+  D + A +L  +M   G++PNVV +
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++      G++EEA +LL+ M   GV P+ F YN ++      G++  A    + ++ 
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +  ++   I GY K  ++  A   + EML  G+ P    Y  L  G F+   +  
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +F  +   GV  D      FI GL KNG + EAL++F  L+      D+ +YS LI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G ++ A+EL   +    +  ++  YN ++  LC  G + +A  LF  M  KG+ P
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V ++T++ G  ++   ++   L H M  +
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 459



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 222/419 (52%), Gaps = 24/419 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+    +++  G +P+ +T+   I G  +TG    A   F+EM++     G++  P+  
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD----HGLM--PNNP 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +I+G  K G + +A  +   +    + PDV T ++ I G        EA ++F E+
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V T+S ++   CK G++E+A +L + M   G+ PN F+YN L+DG C +G +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA++LF  M   G + +  +YS +I+GYCK++ +  A SL+ EM SKG++P    YN L
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E+A  LF EM + G A  T ++ T IDG CK+  I EA +LF+ +   + 
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV-----------------TYN 344
             D  +Y+ +ID  CK+G+++ A  LF  +    LI D V                 TY 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++I+A C +  + +A  L  ++  KG+       + L+    +  + ++  +LL  M E
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 218/454 (48%), Gaps = 64/454 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  K+   G +PNV+ YSTLI G    G    A  L    ++G    GV   PD   
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL----LDGMSCSGVA--PDIFC 222

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  II  L K G +++A   LL+++ + + PD VT+ + I G+       EA + F EM+
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282

Query: 123 DQGVQPN-----------------------------------VVTFSVIMDELCKNGKME 147
           D G+ PN                                   V T S  +  L KNG+++
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA ++   + + G+ P+ F Y++L+ GFC  G V +A EL   M   G   N+F Y+ L+
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G CK+ +I+ A  L+  M  KG++P  VTY+T+  G  +   V  AF LF EM   GV 
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ 462

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             ++ Y   + G CK G + +A+ LFR + + K      S++ LIDG CKS +++ A +L
Sbjct: 463 PHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCKSCKIQEASQL 521

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME-----------------AKG 370
           F  +    ++ D VTY  +I   C  GKM++A+ LF +M+                 AKG
Sbjct: 522 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKG 581

Query: 371 VAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDE 403
           V PD V +  ++   C  +N    +VE     DE
Sbjct: 582 VKPDEVTYGLVIYAHCKEDN----LVEAFKLRDE 611



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 211/420 (50%), Gaps = 29/420 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------ING---NGEFGVV 55
           G  PN  TY+ +  GLCR      A   FEEM               I+G    G+   V
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 56  CKPDAVI-----------YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
            +   V+           Y  +I GLCK G ++KA E+L  M      P+  T+  +I G
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           +C  ++   A  L  EM  + + P+ V++  +++ LC    +  A++LLE M   G++PN
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY+TL+ G+   GR+  A+ L   M   G   ++F Y+ +I+   K  ++E A +   
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  +G+KP  VT+    +G  +  ++  A K FDEM  HG+  +   Y   I+G  K G
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            ++EAL +FR L  L    D+++ S  I GL K+GR++ A ++F  L    L+ DV TY+
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I   C  G+++KA +L  +M  KG+AP+   +N L+ G  ++ +  +  +L   M E+
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 216/419 (51%), Gaps = 26/419 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA ++F  L A G  P+V T S  I+GL + G    AL +F E+     E G+V  PD 
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL----KEKGLV--PDV 360

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++I G CK+G V+KA EL  +M  K I P++  YN+++ G C + D   A++LF  
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ VT+S ++D  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I P  VTY T
Sbjct: 481 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 241 LFIG------------LFEIHQ-----VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +               LF+  Q     V+  F LF++M   GV  D   Y   I   CK 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 284 GYIVEALELFRTLRILKCELDIRS-YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
             +VEA +L R   + K  L   + +  LI  LCK   L  A +L   +    L   +  
Sbjct: 600 DNLVEAFKL-RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 658

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + ++ +    GKMD+A  +F  +++ G+ PD      L+ G + + ++     L+ ++
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 37/387 (9%)

Query: 50  GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN 109
           GE G+V  P+   YT I  GLC+   +++AK    +M+   + PD    +++I GF    
Sbjct: 2   GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           D +E  R+   M+  G+  N++T++V++  LCK GKME+A+++L+ MI +G +PN+  + 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++G+C    + RA EL   ME      +  SY  +ING C  K++  A  L  +M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR--------------- 274
           G+KP VV Y+TL +G     ++E A +L D M   GVA D + Y                
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 275 --------------------TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                                FI G  K G + EA + F  +       +   Y+ LI+G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             K+G L  A  +F  L    ++ DV T +  IH L  +G++ +A  +F +++ KG+ PD
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
              +++L+ G  +  E  K  EL   M
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEM 386



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%)

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M   G+  +T+ Y     GLC+   + EA   F  ++    + D  + S LIDG  + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +     +   +    +  +++TYN++IH LC  GKM+KA ++   M   G  P+   F  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           L+ G  R +   + +ELL  M++RN
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRN 145


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 227/439 (51%), Gaps = 43/439 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++      P++++Y+TLINGLC+      A+ L  EM          C P++V
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG------CFPNSV 69

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             TT++DGLCK+G +D+A ELL  MK K  + DVV Y ++I GFC   + +  K LF EM
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  NVVT+S ++  LC+ G+ +EA+ +L  M + G+ P+   Y  L+DG C  GR 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G + +  +Y++L++G CK   +  A  +   M+ KG K  VVTYNTL
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 242 FIGLFEIHQVERAFKLFDEM--QRHGVAADTWAYRTFIDGLCKNGYIVEALELFR----- 294
             GL +  +V+ A KLF+ M    + +  + + +   I GLCK G + +A+++ R     
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 295 ------------------------TLRILKCELDIR------SYSCLIDGLCKSGRLKIA 324
                                    + + K  LD+       +YS LIDG CK   L IA
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    L   +  YN ++ +LC +G +++A  LF +M      PD ++FNT++ G
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429

Query: 385 CIRNNETSKVVELLHRMDE 403
            ++  +   V EL  +M E
Sbjct: 430 TLKAGDFQFVKELQMKMVE 448



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 217/401 (54%), Gaps = 8/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++   G   NV+TYS L++GLCR G    A      ++N   E G+   PD V YT 
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA----NTVLNAMAEHGI--HPDVVTYTG 178

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDGLCK+G    A +LL  M +K   P  VTYN ++ G C      +A ++   M+++G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTGRVNR 183
            + +VVT++ +M  LC  GK++EA +L   M   +  + PN F +N L+ G C  GR+ +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A ++   M   G   N+ +Y++L+ G  K  +I+ A+ L+ ++L  G  P   TY+ L  
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  ++  +  A  LF EM+ HG+    + Y T +  LCK G + +A  LF+ +    CE 
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           DI S++ +IDG  K+G  +   EL   +    L  D +T++ +I+ L   G++D+A    
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M A G  PD + +++L+ G     +T++++ LLH+M  +
Sbjct: 479 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 191/338 (56%), Gaps = 2/338 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC+ G V +A  L+ +M  K+++PD+V+YN++I G C A    EA  L +EM   G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VT + +MD LCK+G+M+EA +LLE M + G   +  +Y TL+ GFC  G ++R K
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M   G   NV +YS L++G C+  + + A ++ + M   GI P VVTY  L  GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +   A  L + M   G       Y   + GLCK G +++A ++ R +     + D+
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            +Y+ L+ GLC  G++  A +LF+S+      L  +V T+N++I  LC +G++ KA  + 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             M  KG   + V +N L+ GC++  +  + +EL  ++
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 341



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 2/305 (0%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N V++G C      EA  L  EM  + V P++V+++ +++ LCK  K++EA  LL  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN+    TLMDG C  GR++ A EL  +M+  G   +V  Y  LI+G+C N  ++ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L+ EML KGI   VVTY+ L  GL  + Q + A  + + M  HG+  D   Y   ID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK+G    A++L   +     E    +Y+ L+ GLCK G +  A+++   +      A
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDM--EAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           DVVTYN ++  LC  GK+D+A  LF  M      + P+   FN L+ G  +    +K V+
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 397 LLHRM 401
           +  +M
Sbjct: 302 IHRKM 306



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 164/337 (48%), Gaps = 4/337 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +V+TY+TL+ GLC  G    AL LF  M +         +P+   +  +I GLCKE
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKE 293

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + KA ++  +M  K    ++VTYN ++ G   A    EA  L+ +++D G  PN  T+
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 353

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+++D  CK   +  A  L   M   G+ P  F YNTLM   C  G + +AK LF  M +
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             C+ ++ S++ +I+G  K  + +    L  +M+  G++P  +T++TL   L ++ +++ 
Sbjct: 414 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 473

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A    + M   G   D   Y + + GL   G   E + L   +      LD +  S ++ 
Sbjct: 474 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 533

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            LC S +     EL  +  +G      ++ N ++  L
Sbjct: 534 CLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 570



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 118/236 (50%)

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++ G C  G V  A  L   M       ++ SY+ LING CK K+++ A+ L  EM +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G  P  VT  TL  GL +  +++ A +L + M++ G  AD   Y T I G C NG +  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             ELF  +       ++ +YSCL+ GLC+ G+ K A  + +++    +  DVVTY  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LC DG+   A DL   M  KG  P  V +N L+ G  +        ++L  M E+
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++    CEP++I+++T+I+G  + G       L  +M+    E G+  +PDA+
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV----EMGL--RPDAL 456

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T+I+ L K G +D+AK  L +M      PD + Y+S+++G     D+ E   L  +M
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             +G   +    S I+  LC + +  +  +LL    Q
Sbjct: 517 AAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 553


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 222/424 (52%), Gaps = 37/424 (8%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           ++ A GC PN  +Y+ L+ GLC    +  AL+L   M+  +   G  C PD V YTT+I+
Sbjct: 157 RMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGG--CPPDVVSYTTVIN 214

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL +EG +DKA  L  +M D+ ++P+ +TYN ++ G+C +    EA  +F +M   GV+P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +VVT++ +M  LCKNG+  EA ++ + M++ G +P++ +Y TL+ G+   G + +  +L 
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G + + + ++ILI  Y K+  ++ A+  +S+M  +G+ P +VTY T+   L  +
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDG----------------------------- 279
            +V+ A   FD +   G+  +   +RT I G                             
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 280 ------LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                 LCK G +  A  +F  +  +  + D+ +Y+ LIDG C  G++  A +L   +  
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             +  + VTYN +I+  C +G+++ A  LF  M +KGV P  V ++T++ G  +    + 
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAA 574

Query: 394 VVEL 397
             EL
Sbjct: 575 AKEL 578



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 234/468 (50%), Gaps = 64/468 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVV- 55
           EA  +F K+   G EP+V+TY+TL+  LC+ G ++ A  +F+ M+    +     +G + 
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +PD  I+  +I    K G VD+A     +M+ + ++
Sbjct: 319 HGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLH 378

Query: 93  PDVVTYNSV-----------------------------------IRGFCYANDSNEAKRL 117
           P++VTY +V                                   I G C  +  ++A+ L
Sbjct: 379 PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEEL 438

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            +EM+ +G+ PN + F+ +++ LCK G +  A  + +LM+++ V+ +   Y TL+DG+CL
Sbjct: 439 AVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCL 498

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V+ A +L   M   G K N  +Y+ +INGYCKN  IE A SL+ +M SKG+ P +V 
Sbjct: 499 DGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVI 558

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+T+  GLF+  ++  A +L+  M + G+      Y   + GLC+N    +AL +F  L 
Sbjct: 559 YSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLC 618

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++   L  R+++ +ID L K GR   A +LF SL    L+ +VVTY +M+ +L   G ++
Sbjct: 619 LIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLE 678

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  DLFL +E  G   D    N L+    +  E  K    L ++DE N
Sbjct: 679 ELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENN 726



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 181/386 (46%), Gaps = 50/386 (12%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           VAL+LF  M           + D   Y+ +I    + G +D A   L ++         +
Sbjct: 83  VALSLFNRMP----------RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAI 132

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           T++ +++G C+   +++A  + +  M   G  PN  ++++++  LC   + ++A  LL  
Sbjct: 133 TFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHT 192

Query: 156 MI----QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           M+    + G  P+   Y T+++G    G++++A  LF  M   G   N  +Y+ L++GYC
Sbjct: 193 MMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYC 252

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            + + + A+ ++ +M   G++P VVTYNTL + L +  +   A K+FD M + G   D+ 
Sbjct: 253 SSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS 312

Query: 272 AYRTFIDGLCKNGYIV-----------------------------------EALELFRTL 296
            Y T + G    GY+V                                   EA+  F  +
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      +I +Y  ++D LC+ G++  A   F  L    L  + V +  +IH LCA  K 
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           DKA +L ++M  +G+ P+ + FNTL+
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLL 458


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 213/387 (55%), Gaps = 8/387 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  K+ A GC P + TY+ L+NGLC+ G    A++L  ++++ NG     C PD V
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 236

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDGL KE    +A +L  +M  + +  D V Y ++IRG   A    +A  ++  M
Sbjct: 237 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM 296

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P+VVT S ++D LCK G++  A ++ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 297 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 356

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++E A + + EML  G KP V TYN L
Sbjct: 357 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    + A  +FD+M     + +   Y T I GLCK   + +A   F+ ++   C
Sbjct: 417 VSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   YS L+DGLCKSG+L+    LF  + R   +A+  T   +I  LC   ++D+A  
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVS 535

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           LF  +  +G+ P   A+N+++   I++
Sbjct: 536 LFNAIRKEGM-PHPYAYNSIISTLIKS 561



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +G  P++ T++ +++GLC++G  + A++ FE     NG     C  D   YT I+D L K
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT-NG-----CTIDIHTYTAIVDWLAK 177

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              +  A  L+ ++      P + TYN+++ G C      EA  L  +++D G  P+VVT
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D L K  +  EA +L + M   G+  +   Y  L+ G    G++ +A  ++ +M 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S GC  +V + S +I+G CK   I  A+ ++  M ++G+ P  V Y+ L  GL +  +++
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++  +M++     DT  Y   IDGLCK+G +  A   F  +    C+ D+ +Y+ L+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G CK+G    A  +F  +       +VVTY  +I  LC   ++ KA   F  M+ +G  
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477

Query: 373 PDCVAFNTLMLGCIRNNE 390
           PD   +++L+ G  ++ +
Sbjct: 478 PDSFVYSSLVDGLCKSGK 495



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 184/388 (47%), Gaps = 5/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V T++ LI G C       A  +  EM     ++GV   P    +  ++ GLCK G V
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREM---EEDYGVA--PSLKTHNLVLHGLCKSGKV 146

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A +            D+ TY +++          +A  L  ++   G  P + T++ +
Sbjct: 147 LAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNAL 206

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LCK G++EEA  LL  ++  G  P+   Y +L+DG     R   A +LF  M   G 
Sbjct: 207 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 266

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +   Y+ LI G  +  +I  A S+Y  M S+G  P VVT +T+  GL +  ++  A +
Sbjct: 267 VLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 326

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F  M+  G+A +   Y   I GLCK   +  ALE+   ++   C  D  +Y+ LIDGLC
Sbjct: 327 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 386

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KSG ++ A   F  +       DV TYNI++   C  G  D A  +F DM +   +P+ V
Sbjct: 387 KSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVV 446

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            + TL+ G  +  + +K       M ER
Sbjct: 447 TYGTLISGLCKRRQLTKASLYFQHMKER 474



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 1/310 (0%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
           V T N+++  F       EA  L    +     P+V T++V++   C   + EEA  ++ 
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           E+    GV P+   +N ++ G C +G+V  A + F +  + GC  ++ +Y+ +++   KN
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKN 178

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K+I+ A++L  ++ + G  PT+ TYN L  GL ++ ++E A  L  ++  +G   D   Y
Sbjct: 179 KKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 238

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            + IDGL K     EA +LF+ + +    LD   Y+ LI GL ++G++  A  ++ ++  
Sbjct: 239 TSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS 298

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
              + DVVT + MI  LC  G++  A  +F  MEA+G+AP+ V ++ L+ G  +  +   
Sbjct: 299 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 358

Query: 394 VVELLHRMDE 403
            +E+L +M +
Sbjct: 359 ALEMLAQMKK 368



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G + +    N L+D F  T R   A  L  +  +     +V ++++LI GYC  +E E
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 218 GALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A ++  EM    G+ P++ T+N +  GL +  +V  A   F+    +G   D   Y   
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +D L KN  I +A+ L   +    C   I +Y+ L++GLCK GRL+ A +L   +     
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             DVVTY  +I  L  + +  +A+ LF +M  +G+  D V +  L+ G ++  +  +   
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 397 LLHRMDER 404
           +   M  +
Sbjct: 292 VYKTMTSQ 299



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 3/224 (1%)

Query: 184 AKELFVSMES--MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           A ELF  + S   G +H+V + + L++ + + K    A +L    L+    P V T+N L
Sbjct: 41  AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G     + E AF +  EM+  +GVA     +   + GLCK+G ++ A++ F T     
Sbjct: 101 ITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNG 160

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C +DI +Y+ ++D L K+ +++ A  L   +        + TYN +++ LC  G++++A 
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           DL   +   G  PD V + +L+ G  +   + +  +L   M  R
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 264


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 208/384 (54%), Gaps = 15/384 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   G  PN  TY  L++GLCR G    A  L  ++ N          P+ V
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVV 372

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++ T+I+G    G +D+AK ++ + M      PD+ TYN++I G C       A+ L  E
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +PNV+T+++++D  CK G++EEA  +L+ M   G+  NA  YN L+   C   +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +F  M S GCK ++F+++ LI G CK  + E AL LY +ML +G+    +TYNT
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L         ++ A KL ++M   G   D   Y   I  LC+ G I + L LF  +  + 
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM--MS 610

Query: 301 CELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L+  + SC  LI+GLC++G ++ A E    +    L  D+VTYN +I+ LC  G+  +
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 670

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLM 382
           A +LF  ++ +G+ PD + +NTL+
Sbjct: 671 ALNLFDKLQVEGICPDAITYNTLI 694



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 217/436 (49%), Gaps = 46/436 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT---------------IVALNLFEEMI 46
            A AL   +   GC PN I Y TLI+ L + G                 I  +N F + I
Sbjct: 253 SACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 312

Query: 47  NGNGEFGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           +G      +CK                    P++  Y  ++ GLC+ G VD+A+ LL   
Sbjct: 313 HG------LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL--- 363

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE-MMDQGVQPNVVTFSVIMDELCKNGK 145
            +K  NP+VV +N++I G+      +EAK +  E M+  G  P++ T++ ++  LCK G 
Sbjct: 364 -NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +  A +L+  M   G  PN   Y  L+D FC  GR+  A+ +   M   G   N   Y+ 
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+  CK+++++ AL+++ +M SKG KP + T+N+L  GL ++++ E A  L+ +M   G
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V A+T  Y T I    + G + EAL+L   +    C LD  +Y+ LI  LC++G ++   
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 602

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +    L  + ++ NI+I+ LC  G +  A +   DM  +G+ PD V +N+L+ G 
Sbjct: 603 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 662

Query: 386 IRNNETSKVVELLHRM 401
            +     + + L  ++
Sbjct: 663 CKTGRAQEALNLFDKL 678



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 185/358 (51%), Gaps = 14/358 (3%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVI 62
           A +   + + GC P++ TY+TLI GLC+ G+ + A  L  EM I G       C+P+ + 
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG-------CEPNVIT 444

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +ID  CKEG +++A+ +L +M  K +  + V YN +I   C      +A  +F +M 
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++ TF+ ++  LCK  K EEA  L + M+  GV  N   YNTL+  F   G + 
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M   GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P  ++ N L 
Sbjct: 565 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     ++ A +   +M   G+  D   Y + I+GLCK G   EAL LF  L++    
Sbjct: 625 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 684

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV---LIADVVTYNIMIHALCADGKMD 357
            D  +Y+ LI   CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 685 PDAITYNTLISWHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 174/373 (46%), Gaps = 33/373 (8%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++  I+    + G   +A  LLL M+   +  P   +YN V+      N       +F E
Sbjct: 166 LFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYE 225

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P V TF V+M  LC   +++ A  LL+ M + G  PNA VY TL+      GR
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN   +L   M  MGC  +V +++  I+G CK   I  A  L   ML +G  P   TY  
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345

Query: 241 LFIGLFEIHQVERAFKLFDE--------------------------------MQRHGVAA 268
           L  GL  + +V+ A  L ++                                M   G   
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D + Y T I GLCK GY+V A EL   ++I  CE ++ +Y+ LID  CK GRL+ A  + 
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +    L  + V YN +I ALC D K+  A ++F DM +KG  PD   FN+L+ G  + 
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 389 NETSKVVELLHRM 401
           N+  + + L   M
Sbjct: 526 NKFEEALGLYQDM 538



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  +++  GCEPNVITY+ LI+  C+ G    A N+ +EM +G G        +A
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM-SGKG-----LALNA 477

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LCK+  V  A  +   M  K   PD+ T+NS+I G C  N   EA  L+ +
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +T++ ++    + G M+EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ P +VTYN+
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 706



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + +++D+L   G+ +    LL  M Q G+     ++  +M  +   G   +A  L + M 
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 193 SM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            +  C+    SY+++++        +   +++ EMLSKGI PTV T+  +   L  +++V
Sbjct: 192 GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 251

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A  L  +M RHG   +   Y+T I  L K G + E L+L   + ++ C          
Sbjct: 252 DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGC---------- 301

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
                                    I DV T+N  IH LC   ++ +A  L   M  +G 
Sbjct: 302 -------------------------IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGF 336

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P+   +  LM G  R  +  +   LL+++   N
Sbjct: 337 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 370


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 7/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ ++Y  +INGLC      +A  L E+M           KP+ V+Y+T+I G   EG +
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASEGRI 400

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A+ LL  M    + PD+  YN++I     A    EA    +E+  +G++P+ VTF   
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K GKM EA++  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G 
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V + S  I+G  KN  ++ AL ++SE+  KG+ P V TY++L  G  +  +VE+AF+
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L DEM   G+A + + Y   +DGLCK+G I  A +LF  +     E D  +YS +IDG C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KS  +  A+ LFH +P   +      YN ++H  C +G M+KA +LF +M  KG A   +
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTL 699

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
           +FNTL+ G  ++ +  +  +L   M
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEM 724



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 203/391 (51%), Gaps = 6/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N+ITY+ LI+GLC+ G    A  + + MI       + CKP++  +  +I+G C+E
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT------LGCKPNSRTFCLLIEGYCRE 327

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + +A ELL +M+ +N+ P  V+Y ++I G C+  D + A +L  +M   G++PNVV +
Sbjct: 328 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 387

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++      G++EEA +LL+ M   GV P+ F YN ++      G++  A    + ++ 
Sbjct: 388 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 447

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +  ++   I GY K  ++  A   + EML  G+ P    Y  L  G F+   +  
Sbjct: 448 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +F  +   GV  D      FI GL KNG + EAL++F  L+      D+ +YS LI 
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G ++ A+EL   +    +  ++  YN ++  LC  G + +A  LF  M  KG+ P
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V ++T++ G  ++   ++   L H M  +
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 658



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA  F ++   G  PN   Y+ LING  + G+ + AL++F  +       GV+  PD  
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL----HALGVL--PDVQ 525

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +  I GL K G V +A ++  ++K+K + PDV TY+S+I GFC   +  +A  L  EM
Sbjct: 526 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 585

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+  ++ ++D LCK+G ++ A +L + M + G+ P++  Y+T++DG+C +  V
Sbjct: 586 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 645

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M S G + + F Y+ L++G CK  ++E A++L+ EML KG   T +++NTL
Sbjct: 646 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTL 704

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM    +  D   Y T ID  CK G + EA  LF+ ++    
Sbjct: 705 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +Y+ L+ G  K G+    + LF  +    +  D VTY ++I+A C +  + +A  
Sbjct: 765 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 824

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  ++  KG+       + L+    +  + ++  +LL  M E
Sbjct: 825 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 204/382 (53%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA ++F  L A G  P+V T S  I+GL + G    AL +F E+     E G+V  PD 
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL----KEKGLV--PDV 559

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++I G CK+G V+KA EL  +M  K I P++  YN+++ G C + D   A++LF  
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ VT+S ++D  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I P  VTY T
Sbjct: 680 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     +  ++E A  LF EMQ   +  DT  Y + + G  K G   E   LF  +    
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  +Y  +I   CK   L  A++L   +    ++     ++++I ALC    + +A 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L  +M   G+ P   A +TL+
Sbjct: 859 KLLDEMGELGLKPSLAACSTLV 880



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 211/420 (50%), Gaps = 29/420 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------ING---NGEFGVV 55
           G  PN  TY+ +  GLCR      A   FEEM               I+G    G+   V
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263

Query: 56  CKPDAVI-----------YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
            +   V+           Y  +I GLCK G ++KA E+L  M      P+  T+  +I G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           +C  ++   A  L  EM  + + P+ V++  +++ LC    +  A++LLE M   G++PN
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY+TL+ G+   GR+  A+ L   M   G   ++F Y+ +I+   K  ++E A +   
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  +G+KP  VT+    +G  +  ++  A K FDEM  HG+  +   Y   I+G  K G
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            ++EAL +FR L  L    D+++ S  I GL K+GR++ A ++F  L    L+ DV TY+
Sbjct: 504 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 563

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I   C  G+++KA +L  +M  KG+AP+   +N L+ G  ++ +  +  +L   M E+
Sbjct: 564 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 192/396 (48%), Gaps = 42/396 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +F++LK  G  P+V TYS+LI+G C+ G    A  L +EM + G         P+ 
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-------IAPNI 594

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IY  ++DGLCK G + +A++L   M +K + PD VTY+++I G+C + +  EA  LF E
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654

Query: 121 MMDQGVQPN----------------------------------VVTFSVIMDELCKNGKM 146
           M  +GVQP+                                   ++F+ ++D  CK+ K+
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 714

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EASQL + MI   + P+   Y T++D  C  G++  A  LF  M+      +  +Y+ L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + GY K  +     +L+ +M++KG+KP  VTY  +     +   +  AFKL DE+   G+
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 +   I  LCK   + EA +L   +  L  +  + + S L+    ++G++  A  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +F  +    L+ D  T   +++    D   + A +L
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 37/387 (9%)

Query: 50  GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN 109
           GE G+V  P+   YT I  GLC+   +++AK    +M+   + PD    +++I GF    
Sbjct: 201 GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 258

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           D +E  R+   M+  G+  N++T++V++  LCK GKME+A+++L+ MI +G +PN+  + 
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 318

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++G+C    + RA EL   ME      +  SY  +ING C  K++  A  L  +M   
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR--------------- 274
           G+KP VV Y+TL +G     ++E A +L D M   GVA D + Y                
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 275 --------------------TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                                FI G  K G + EA + F  +       +   Y+ LI+G
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             K+G L  A  +F  L    ++ DV T +  IH L  +G++ +A  +F +++ KG+ PD
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
              +++L+ G  +  E  K  EL   M
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEM 585



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 79/336 (23%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRL----FIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           +NPDV      IR   + N   + KRL    +      GV   + +FS++  +LC +   
Sbjct: 67  LNPDV------IRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELF 120

Query: 147 EEASQLLELMIQIGVRPNAF-----------------VYNTLMDGFCLTGRVNRAKELFV 189
             A+ +L  MI+     ++                  V++ L+D +   G ++ A  +F 
Sbjct: 121 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFF 180

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
             ++          SILI+    N       SL S M  KG+ P   TY  +  GL    
Sbjct: 181 VAKN---------DSILISLIRCN-------SLRS-MGEKGLVPNTYTYTIITAGLCRAK 223

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++  A   F+EMQ+ G+  D  A    IDG  + G I E L +   +  + C + I    
Sbjct: 224 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM--VSCGIPI---- 277

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
                                        +++TYN++IH LC  GKM+KA ++   M   
Sbjct: 278 -----------------------------NLITYNVLIHGLCKFGKMEKAAEILKGMITL 308

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  P+   F  L+ G  R +   + +ELL  M++RN
Sbjct: 309 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 215/401 (53%), Gaps = 11/401 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   GC P+ +TY+T+++ LC+ G    A  L        G F    KP   +
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-------AGRF----KPSVPV 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDG+CKEG ++ A +LL +M D  ++P+VV+Y+ +I   C + +   A  LF +M 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   N+ TF+ ++      GK+ EA  L +LMIQ G  PN   YNTL+ G C  G + 
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M+  GC  NV +YSILI+G+ K+ ++ GA   ++ M+S G +P VVTY  + 
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +    ++A  L ++M   G   +T  + TFI GLC NG +  A++L   ++   C 
Sbjct: 427 DVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCL 486

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +Y+ L+D L +  + + A+ LF  +    L  ++VTYN +++     G M +A  L
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQL 546

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F     +G APD + +NT++    +  +     +L+ R+  
Sbjct: 547 FGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 11/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++  FGC+P V  Y+ L++ L       +   L+  M     + G++  P+  
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM----KKDGLI--PNVF 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LCK   VD A +L ++M +K   PD VTY +++   C A   ++A+ L    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V  ++ ++D +CK G++E A +LL  M+  GV PN   Y+ +++  C++G V
Sbjct: 241 -----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   GC  N+ +++ LI G     ++  AL L+  M+  G +P VV YNTL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +E A ++ D+MQR G   +   Y   IDG  K+G +V A E +  +    C
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+C++D LCK+     A  L   +       + +T+N  I  LC +G+++ A  
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   M+  G  P+   +N L+    R N+  +   L   ++ RN
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 7/347 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF ++   GC+ N+ T++ LI G    G    AL+L++ MI         C+P+ V 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG------CEPNVVA 351

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I GLC  G +++A ++  QM+     P+V TY+ +I GF  + D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PNVVT++ ++D LCKN   ++A+ L+E M   G  PN   +NT + G C  GRV 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M+  GC  N+ +Y+ L++   +  + E A  L+ E+ ++ ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-C 301
            G      +  A +LF +    G A D+  Y T I   CK G +  A +L   +  +K  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             DI +Y+ LI G C    ++ A           +  +  T+N ++ 
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 179/408 (43%), Gaps = 65/408 (15%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A  Y  +I+ L +E  +D  + +L QMK   IN     +  +I G+     + +A ++F 
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + + G +P V  ++ ++D L    K +  + L   M + G+ PN F YN L+   C   
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 180 RVNRAKELFVSMESMGC------------------------------KHNVFSYSILING 209
           RV+ A +LFV M + GC                              K +V  Y+ LI+G
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDG 253

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV--- 266
            CK   IE A+ L  EM+  G+ P VV+Y+ +   L     VE AF LF +M   G    
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313

Query: 267 -------------------AADTW-------------AYRTFIDGLCKNGYIVEALELFR 294
                              A D W             AY T I GLC NG + EAL++  
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  ++ +YS LIDG  KSG L  A E ++ +       +VVTY  M+  LC + 
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             D+A+ L   M  +G  P+ + FNT + G   N      ++LL RM 
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 9/265 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A+  + ++ + GC PNV+TY+ +++ LC+      A +L E+M + G       C P+ +
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG-------CTPNTM 455

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I GLC  G V+ A +LL +M+     P++ TYN ++      N   EA  LF E+
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +QPN+VT++ ++    + G M EA QL    +  G  P++  YNT++  +C  G+V
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 182 NRAKELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A +L   + SM   H ++ +Y+ LI G C    IE A++   + +++GI P   T+N 
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG 265
           L    F+         + D++ R G
Sbjct: 636 LVRCFFDSLGHMGPIHILDDILRKG 660



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 9/138 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF-EEMINGNGEFGVVCKPDA 60
           EA  LF +++A   +PN++TY+T++ G  R G    AL LF + ++ G         PD+
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA-------PDS 559

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y T+I   CK+G V  A +L+ ++   K  +PD++TY S+I G C   +  EA     
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 120 EMMDQGVQPNVVTFSVIM 137
           + ++QG+ PN  T++ ++
Sbjct: 620 KAINQGICPNFATWNALV 637



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K    G  P+ ITY+T+I+  C+ G   +A  L E  ++   E+     PD +
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER-VSSMKEW----HPDII 596

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
            YT++I G C    +++A   L +  ++ I P+  T+N+++R F
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 208/384 (54%), Gaps = 15/384 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   G  PN  TY  L++GLCR G    A  L  ++ N          P+ V
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVV 354

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++ T+I+G    G +D+AK ++ + M      PD+ TYN++I G C       A+ L  E
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +PNV+T+++++D  CK G++EEA  +L+ M   G+  NA  YN L+   C   +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +F  M S GCK ++F+++ LI G CK  + E AL LY +ML +G+    +TYNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L         ++ A KL ++M   G   D   Y   I  LC+ G I + L LF  +  + 
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM--MS 592

Query: 301 CELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L+  + SC  LI+GLC++G ++ A E    +    L  D+VTYN +I+ LC  G+  +
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQE 652

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLM 382
           A +LF  ++ +G+ PD + +NTL+
Sbjct: 653 ALNLFDKLQVEGICPDAITYNTLI 676



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 217/436 (49%), Gaps = 46/436 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT---------------IVALNLFEEMI 46
            A AL   +   GC PN I Y TLI+ L + G                 I  +N F + I
Sbjct: 235 SACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAI 294

Query: 47  NGNGEFGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           +G      +CK                    P++  Y  ++ GLC+ G VD+A+ LL   
Sbjct: 295 HG------LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL--- 345

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE-MMDQGVQPNVVTFSVIMDELCKNGK 145
            +K  NP+VV +N++I G+      +EAK +  E M+  G  P++ T++ ++  LCK G 
Sbjct: 346 -NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +  A +L+  M   G  PN   Y  L+D FC  GR+  A+ +   M   G   N   Y+ 
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+  CK+++++ AL+++ +M SKG KP + T+N+L  GL ++++ E A  L+ +M   G
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V A+T  Y T I    + G + EAL+L   +    C LD  +Y+ LI  LC++G ++   
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGL 584

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +    L  + ++ NI+I+ LC  G +  A +   DM  +G+ PD V +N+L+ G 
Sbjct: 585 ALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGL 644

Query: 386 IRNNETSKVVELLHRM 401
            +     + + L  ++
Sbjct: 645 CKTGRAQEALNLFDKL 660



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 185/358 (51%), Gaps = 14/358 (3%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVI 62
           A +   + + GC P++ TY+TLI GLC+ G+ + A  L  EM I G       C+P+ + 
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG-------CEPNVIT 426

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +ID  CKEG +++A+ +L +M  K +  + V YN +I   C      +A  +F +M 
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++ TF+ ++  LCK  K EEA  L + M+  GV  N   YNTL+  F   G + 
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M   GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P  ++ N L 
Sbjct: 547 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     ++ A +   +M   G+  D   Y + I+GLCK G   EAL LF  L++    
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV---LIADVVTYNIMIHALCADGKMD 357
            D  +Y+ LI   CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 667 PDAITYNTLISWHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 174/373 (46%), Gaps = 33/373 (8%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++  I+    + G   +A  LLL M+   +  P   +YN V+      N       +F E
Sbjct: 148 LFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYE 207

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P V TF V+M  LC   +++ A  LL+ M + G  PNA VY TL+      GR
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN   +L   M  MGC  +V +++  I+G CK   I  A  L   ML +G  P   TY  
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327

Query: 241 LFIGLFEIHQVERAFKLFDE--------------------------------MQRHGVAA 268
           L  GL  + +V+ A  L ++                                M   G   
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D + Y T I GLCK GY+V A EL   ++I  CE ++ +Y+ LID  CK GRL+ A  + 
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +    L  + V YN +I ALC D K+  A ++F DM +KG  PD   FN+L+ G  + 
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 389 NETSKVVELLHRM 401
           N+  + + L   M
Sbjct: 508 NKFEEALGLYQDM 520



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  +++  GCEPNVITY+ LI+  C+ G    A N+ +EM +G G        +A
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM-SGKG-----LALNA 459

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LCK+  V  A  +   M  K   PD+ T+NS+I G C  N   EA  L+ +
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +T++ ++    + G M+EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ P +VTYN+
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 688



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + +++D+L   G+ +    LL  M Q G+     ++  +M  +   G   +A  L + M 
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 173

Query: 193 SM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            +  C+    SY+++++        +   +++ EMLSKGI PTV T+  +   L  +++V
Sbjct: 174 GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 233

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A  L  +M RHG   +   Y+T I  L K G + E L+L   + ++ C          
Sbjct: 234 DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGC---------- 283

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
                                    I DV T+N  IH LC   ++ +A  L   M  +G 
Sbjct: 284 -------------------------IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGF 318

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P+   +  LM G  R  +  +   LL+++   N
Sbjct: 319 TPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 352


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L   G   +V TY TL+ GLC+    +      EEM+N   EFG V  P   
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCK----VEEFEAGEEMMNEMIEFGFV--PSEA 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + ++DGL K+G +  A +L+ ++K   + P +  YN++I   C     +EA+ LF  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN VT+S+++D  CK GK++ A   L  M ++G++   + Y++L+ G C  G++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK LF  M + G K NV  Y+ LI+GYCK  E+  A  LY EM  KGI P   T+  L
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL   +++  A KLF EM    V  +   Y   I+G CK G  V A EL   +     
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LI GLC +GR+  A E  + L       + + ++ ++H  C +G++D A D
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              +M  +GVA D V ++ L+ G +R  +   +++LL +M ++
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 220/437 (50%), Gaps = 42/437 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K+   G +  V  YS+LI+G C+ G    A +LF+EMI  NG      KP+ VI
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI-ANG-----LKPNVVI 462

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT++I G CKEG +  A  L  +M  K I+P+  T+ ++I G C+AN   EA +LF EM+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V PN VT++V+++  CK G    A +LL+ M++ G+ P+ + Y  L+ G C TGRV+
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E    ++    K N   +S L++GYCK   ++ AL    EML +G+   +V Y+ L 
Sbjct: 583 EAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI 642

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G+           L  +M   G+  D   Y T ID   K G +  A  L+  +    C 
Sbjct: 643 YGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL 702

Query: 303 LDIRSYSCLIDGLCK-----------------------------------SGRLKIAWEL 327
            ++ +Y+ LI+GLCK                                    G ++ A +L
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              L  G L A+ VTYNI+I   C  G++ +A ++ ++M   G++PDC++++T++    R
Sbjct: 763 HDVLLEGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 821

Query: 388 NNETSKVVELLHRMDER 404
             +  + ++L   M  R
Sbjct: 822 RGDLKEAIKLWESMLNR 838



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 182/383 (47%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  K+K FG  P++  Y+ LIN +C+ G    A +LF  M    G  G+   P+ V
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM----GHKGLF--PNDV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID  CK G +D A   L +M +  I   V  Y+S+I G C       AK LF EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PNVV ++ ++   CK G++  A +L   M   G+ PN + +  L+ G C   R+
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M       N  +Y++LI G+CK      A  L  EM+ KG+ P   TY  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +V  A +  +++Q      +   +   + G CK G + +AL+  R +     
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D+  YS LI G+ +    +   +L   +    L  D V Y  MI A    G +  A  
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L+  M ++G  P+ V +  L+ G
Sbjct: 692 LWDIMVSEGCLPNVVTYTALING 714



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 203/423 (47%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P + T S ++NGL R     +AL+LF+E+++         +PD  +YT ++  LC+ 
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG------LRPDVYVYTAVVRSLCEL 228

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA------------------- 114
               +A+E++ +M+    +  V TYN  IRG C      EA                   
Sbjct: 229 KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTY 288

Query: 115 ----------------KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                           + +  EM++ G  P+    S ++D L K G +  A  L+  + +
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV P+ FVYN L++  C  G+++ A+ LF +M   G   N  +YSILI+ +CK  +++ 
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL    +M   GIK TV  Y++L  G  ++ ++  A  LFDEM  +G+  +   Y + I 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK G +  A  L+  +       +  +++ LI GLC + R+  A +LF  +    +I 
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           + VTYN++I   C +G   +A +L  +M  KG+ PD   +  L+ G       S+  E +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 399 HRM 401
           + +
Sbjct: 589 NDL 591



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 204/393 (51%), Gaps = 10/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++  +   PN +TY+ LI G C+ G+T+ A  L +EM+    E G+V  PD  
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGLV--PDTY 566

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC  G V +A+E +  ++ +    + + +++++ G+C     ++A     EM
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREM 626

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  ++V +SV++  + +         LL+ M   G+RP+  +Y T++D     G +
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL 686

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M S GC  NV +Y+ LING CK   ++ A  L  EML+    P   TY   
Sbjct: 687 KMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 746

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     +E+A +L D +   G  A+T  Y   I G CK G I EA E+   +     
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 805

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             D  SYS +I   C+ G LK A +L+ S L RGV   D V YN +I+  C  G++ KA 
Sbjct: 806 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV-NPDTVAYNFLIYGCCVTGELTKAF 864

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETS 392
           +L  DM  +GV P+   +N+L+ G C+ ++ +S
Sbjct: 865 ELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSS 897



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 148/316 (46%), Gaps = 35/316 (11%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MMD G+ P + T S +++ L +  +   A  L + ++  G+RP+ +VY  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             RA+E+   MES GC  +V +Y++ I G CKN+ +  A+ + + +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L +GL ++ + E   ++ +EM   G      A    +DGL K G I  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD--- 357
               +  Y+ LI+ +CK G+L  A  LF+++    L  + VTY+I+I + C  GK+D   
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 358 --------------------------------KAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                                            A  LF +M A G+ P+ V + +L+ G 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 386 IRNNETSKVVELLHRM 401
            +  E      L H M
Sbjct: 471 CKEGELHNAFRLYHEM 486



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 35/248 (14%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G    + + S ++NG  + ++   AL L+ E++S G++P V  Y  +   L E+  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY-- 308
             RA ++   M+  G       Y  FI GLCKN  + EA+E+   L       D+ +Y  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 309 ---------------------------------SCLIDGLCKSGRLKIAWELFHSLPRGV 335
                                            S L+DGL K G +  A++L + + +  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +   +  YN +I+++C DGK+D+A  LF +M  KG+ P+ V ++ L+    +  +    +
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 396 ELLHRMDE 403
             L +M E
Sbjct: 411 HFLGKMTE 418


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 215/400 (53%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K+ G  PN+ TY+  I  L R      A  +F+EM +        C PD + YT 
Sbjct: 257 LLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG------CGPDVITYTV 310

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LC  G +DKAKEL ++M+  + +PD VTY +++  F    D    KR + EM   G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+VVT++++++ LCK+G ++ A  +L++M   G+ PN   YNT++ G     R++ A 
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL  +MES+G K   FSY + I+ Y K+ +   A+  +  M  +GI P++   N     L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            E  ++  A  +F+++ + G++ D+  Y   +    K G I +A +L   +    CE D+
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              + LI+ L K+GR+  AW++F  L    L   VVTYNI++  L  +GK+ KA +LF  
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M   G  P+ + FN+L+    +N+     +++  RM   N
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 219/438 (50%), Gaps = 46/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   GC P+VITY+ LI+ LC  G    A  L+ +M   +        PD V
Sbjct: 288 DAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHS------PDRV 341

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D   K G ++  K    +M+     PDVVTY  +I   C + D + A  +   M
Sbjct: 342 TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVM 401

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------ 175
             +G+ PN+ T++ ++  L K  +++EA +LLE M  +GV+P AF Y   +D +      
Sbjct: 402 TTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDP 461

Query: 176 -----------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                          TGR++ A+++F  +   G   +  +Y++L
Sbjct: 462 AKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNML 521

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  Y K  +I+ A  L SEM+SKG +P V+  N+L   L++  +V+ A+K+F  ++   +
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A     Y   + GL K G I++ALELF ++    C  +  +++ L+D L K+  + +A +
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F  +       DV+TYN +I+ L  +G++D A   F  M+ K ++PD V   TL+ G +
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVV 700

Query: 387 RNNETSK----VVELLHR 400
           R+         V+E +H+
Sbjct: 701 RHGRVEDAIKVVMEFVHQ 718



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 212/441 (48%), Gaps = 44/441 (9%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            ++A  LF  +   GC PN IT+++L++ L +     +AL +F  M   N      C PD 
Sbjct: 602  LKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN------CNPDV 655

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            + Y TII GL +EG +D A     QMK K ++PD VT  ++I G        +A ++ +E
Sbjct: 656  LTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714

Query: 121  MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMI---------------------- 157
             + Q  +Q N   +  +M+ +    ++EEA    E+++                      
Sbjct: 715  FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774

Query: 158  --------------QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
                           +G+ P    YN LMDG   +    +A ELF  M+S G   N F+Y
Sbjct: 775  KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834

Query: 204  SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            ++L++ + K+K I     LYSEM S+G +P  +T+N +   L + + + +A  L+ E+  
Sbjct: 835  NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
               +     Y   IDGL K G   +A+++F  +    C  +   Y+ LI+G  KSG +  
Sbjct: 895  GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDF 954

Query: 324  AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            A ELF  + +  +  D+ +Y I++  LC  G++D+A   F +++  G+ PD V++N ++ 
Sbjct: 955  ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIIN 1014

Query: 384  GCIRNNETSKVVELLHRMDER 404
            G  ++    + + L   M  R
Sbjct: 1015 GLGKSRRLDEALSLFSEMKNR 1035



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 177/318 (55%), Gaps = 6/318 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +K+ G  PN  TY+ L++   ++       +L+ EM +        C+P+A+
Sbjct: 814  KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG------CEPNAI 867

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +  II  L K   ++KA +L  ++   + +P   TY  +I G   A  S +A ++F EM
Sbjct: 868  THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +D G  PN V ++++++   K+G+++ A +L + M++ G+RP+   Y  L++  C+TGR+
Sbjct: 928  LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRI 987

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            + A + F  ++  G   +  SY+ +ING  K++ ++ ALSL+SEM ++GI P + TYN L
Sbjct: 988  DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             + L    +V+ A K+++E+Q  G+    + Y   I G   +G   +A  +F+ + ++ C
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107

Query: 302  ELDIRSYSCLIDGLCKSG 319
              +  +++ L +   ++G
Sbjct: 1108 SPNTETFAQLPNKYPRAG 1125



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 209/471 (44%), Gaps = 79/471 (16%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  +F ++    C P+V+TY+T+I GL R G    A   F +M            PD V 
Sbjct: 639  ALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-------FLSPDYVT 691

Query: 63   YTTIIDGLCKEGFVDKAKELLLQ---------------------MKDKNIN-----PDVV 96
              T+I G+ + G V+ A +++++                     + +  I       +++
Sbjct: 692  LCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEIL 751

Query: 97   TYNSV----------IRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGK 145
              NSV          I+  C    + +A+ +F +     G+ P + +++ +MD L  +  
Sbjct: 752  VCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNF 811

Query: 146  MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             E+A +L E M   G  PN F YN L+D    + R+N+  +L+  M S GC+ N  +++I
Sbjct: 812  TEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNI 871

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            +I+   K+  +  AL LY E++S    PT  TY  L  GL +  + E+A K+F+EM  +G
Sbjct: 872  IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931

Query: 266  VAADTWAYRTFIDG-----------------------------------LCKNGYIVEAL 290
               ++  Y   I+G                                   LC  G I EA+
Sbjct: 932  CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991

Query: 291  ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            + F  L++   + D  SY+ +I+GL KS RL  A  LF  +    +  D+ TYN +I  L
Sbjct: 992  QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051

Query: 351  CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               GK+D A  ++ +++  G+ P    +N L+ G   +    +   +  +M
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 177/357 (49%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            LI  LC+    + A N+F++     G       P    Y  ++DGL    F +KA EL  
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLG-----IHPTLESYNCLMDGLLGSNFTEKALELFE 820

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
             MK    +P+  TYN ++     +   N+   L+ EM  +G +PN +T ++I+  L K+ 
Sbjct: 821  DMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             + +A  L   ++     P    Y  L+DG    GR  +A ++F  M   GC  N   Y+
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K+ EI+ A  L+ +M+ +GI+P + +Y  L   L    +++ A + F+E++  
Sbjct: 941  ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  DT +Y   I+GL K+  + EAL LF  ++      D+ +Y+ LI  L  +G++ +A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             +++  L    L   V TYN +I      G  D+A  +F  M   G +P+   F  L
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 184/384 (47%), Gaps = 7/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N+ TY T+   L   G    A     +M     E G +   +A  Y  +I  L   GF +
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMT----EVGFIL--NAYSYNGLIH-LLLPGFCN 217

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A ++  +M  + + P + TY++++       D+ +   L  EM   G++PN+ T+++ +
Sbjct: 218 EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICI 277

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             L +  ++++A  + + M   G  P+   Y  L+D  C  G++++AKEL+V M +    
Sbjct: 278 RALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHS 337

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +  +Y  L++ + K  ++E     ++EM   G  P VVTY  L   L +   V+RAF +
Sbjct: 338 PDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDM 397

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            D M   G+  +   Y T I GL K   + EALEL   +  L  +    SY   ID   K
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK 457

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           SG    A + F ++ +  ++  +   N  ++ L   G++ +A D+F D+   G++PD V 
Sbjct: 458 SGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT 517

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +N LM    +  +  K  +LL  M
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEM 541



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 1/287 (0%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  + +  N+ T+  I   L   G +  A   L  M ++G   NA+ YN L+    
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LL 211

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           L G  N A +++  M S G K ++ +YS L+    +  +    ++L  EM S G++P + 
Sbjct: 212 LPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIY 271

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY      L    +++ A+ +F EM   G   D   Y   ID LC  G + +A EL+  +
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      D  +Y  L+D   K G L+     ++ +       DVVTY I+I ALC  G +
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDV 391

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+A D+   M  KG+ P+   +NT++ G ++     + +ELL  M+ 
Sbjct: 392 DRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
            A  LF K+   G  P++ +Y+ L+  LC TG    A+  FEE+ + G         PD V
Sbjct: 955  ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG-------LDPDTV 1007

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  II+GL K   +D+A  L  +MK++ I+PD+ TYN++I     A   + A +++ E+
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G++P+V T++ ++     +G  ++A  + + M+ +G  PN   +  L + +   G V
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLV 1127

Query: 182  N 182
            +
Sbjct: 1128 H 1128



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 36/218 (16%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL----------FEIHQV---------- 251
           + + IE  + ++  M  K I   + TY T+F  L          F + ++          
Sbjct: 143 EQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAY 202

Query: 252 --------------ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                           A K++  M   G+      Y   +  L + G   + + L   ++
Sbjct: 203 SYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMK 262

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    +I +Y+  I  L ++ R+  AW +F  +       DV+TY ++I ALCA GK+D
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM--LGCIRNNETSK 393
           KA +L++ M A   +PD V + TLM   G + + ET K
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK 360


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 226/470 (48%), Gaps = 76/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + +++  +   P+V TY++LI G CR  +  +A  +F+ M+         C P++V
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG------CDPNSV 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG VD+A ++L +M +K I P V TY   I   C      EA  L   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PNV T++ ++  L + GK+E A  L   M++ G+ PN   YN L++  C+ GR 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  ME  G   N  +Y+ +I G C   +IE A+ L+ +ML  G  PTVVTYNTL
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW------------------------------ 271
             G      V  A +L D M+ +G   D W                              
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 272 -----AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS------------------- 307
                +Y   IDG  K+G +  AL L + +  + C  ++ S                   
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 308 ----------------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
                           Y+ LIDGLC++GR + A+++FH + +   + ++ TY+ +I+ LC
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +GK D+A  L  +ME KG+APD V F +L+ G +          LL RM
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 6/379 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K  GC PNV TY+ LI+GL R G   VA+ L+ +M+      G+V  P+ V Y  
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 378

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ LC  G    A ++   M+      +  TYN +I+G C   D  +A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P VVT++ +++     G +  A++LL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P V +YN +  GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   KC  ++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS LI GLC+ G+   A  L   + R  L  D VT+  +I      G++D A  L   
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M   G  P+   ++ L+ G
Sbjct: 679 MVDMGCKPNYRTYSVLLKG 697



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 6/315 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  ++  G   N  TY+ +I GLC  G    A+ LFE+M+    + G +  P  V 
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML----KMGPL--PTVVT 445

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G   +G V+ A  LL  MK+    PD  TYN ++ GF        A   F EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN V+++ ++D   K+GK++ A  LL+ M ++G  PN   YN +++G     R +
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++   M   G   NV +Y+ LI+G C+N   + A  ++ +M  +   P + TY++L 
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A  L  EM+R G+A D   + + IDG    G I  A  L R +  + C+
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCK 685

Query: 303 LDIRSYSCLIDGLCK 317
            + R+YS L+ GL K
Sbjct: 686 PNYRTYSVLLKGLQK 700



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 145/287 (50%), Gaps = 6/287 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+   G  P V+TY+TLING    G+   A  L + ++  NG     C+PD  
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD-LMKENG-----CEPDEW 479

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G  K G ++ A     +M +  +NP+ V+Y ++I G       + A  L   M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV +++ +++ L K  +  EA ++ + M++ G+ PN   Y TL+DG C  GR 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++F  ME   C  N+++YS LI G C+  + + A  L  EM  KG+ P  VT+ +L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             G   + +++ AF L   M   G   +   Y   + GL K   ++E
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 35/374 (9%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++  L K   V+ A+ L  QM +  I P ++T+N++I          EA+ +  ++   
Sbjct: 168 TLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQY 227

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+V T++ ++   C+N  ++ A  + + M++ G  PN+  Y+TL++G C  GRV+ A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 185 KE-----------------------------------LFVSMESMGCKHNVFSYSILING 209
            +                                   L   M+  GC+ NV +Y+ LI+G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             +  ++E A+ LY +ML +G+ P  VTYN L   L    +   A K+F  M+ HG  A+
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  Y   I GLC  G I +A+ LF  +  +     + +Y+ LI+G    G +  A  L  
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +       D  TYN ++      GK++ A   F +M   G+ P+ V++  L+ G  ++ 
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDG 527

Query: 390 ETSKVVELLHRMDE 403
           +    + LL RM+E
Sbjct: 528 KVDIALSLLKRMEE 541



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 147/282 (52%)

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   G   ++ + + ++ +L K   +E A  L + M+  G++P+   +NTL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V  A+ +   +       +VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P  VTY+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  GL    +V+ A  + +EM   G+    + Y   I  LC   +  EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  ++++Y+ LI GL + G+L++A  L+H + +  L+ + VTYN +I+ LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +F  ME  G   +   +N ++ G     +  K + L  +M
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 40/222 (18%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPTVVTYNTLF 242
           F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G   ++ + NTL 
Sbjct: 111 FISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 170

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           I L +   VE A  L+ +M   G+      + T                           
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNT--------------------------- 203

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                   LI+ L K G+++ A  +   + +  L  DV TY  +I   C +  +D A  +
Sbjct: 204 --------LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  +G  P+ V ++TL+ G        + +++L  M E+
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 223/407 (54%), Gaps = 11/407 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G EPNV+ YS L+ G C+ G       +FEEM +G G      +PD V
Sbjct: 166 KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM-SGRG-----IEPDVV 219

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +ID LC+EG V KA +++ +M ++ + P+VVTYN +I   C      EA  L   M
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTG 179
           +++GV  + VT++ ++  L    +M+EA  LLE MI  +  V PN   +N+++ G C TG
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+ +A ++   M   GC  N+ ++++LI G  +  +++ A+ L  EM S G++P   TY+
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYS 399

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  ++ QV+RA  L  +M+R G+  +   Y   +  LC+ G + +A   F  +   
Sbjct: 400 ILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK- 458

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            C+LD+ +YS +I G C+    K A E L H L  G LI D VTY+++I+     G +  
Sbjct: 459 NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG-LIPDSVTYSMLINMFANSGDLGA 517

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A  +   M A G  PD   F++L+ G     +T KV+EL+  M  ++
Sbjct: 518 AERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564



 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 207/385 (53%), Gaps = 15/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDA 60
           E+ AL + L +     + ++Y+T++  LCR G  +  AL L   M +         +P A
Sbjct: 64  ESPALLSSLPSVR---DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET-------RPTA 113

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YTT++  LC E    +A  LL  M+   + PDVVTY ++IRG C A D ++A  L  E
Sbjct: 114 VSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G++PNVV +S ++   CK G+ E  S++ E M   G+ P+  +Y  L+D  C  G+
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +A ++   M   G + NV +Y++LIN  CK   ++ A+SL + ML KG+    VTYNT
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNT 293

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           L  GL  + +++ A  L +EM  HG   V  +   + + I GLCK G + +A ++   + 
Sbjct: 294 LITGLSGVLEMDEAMGLLEEMI-HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  ++ +++ LI GL +  ++K A EL   +    L  D  TY+I+I+  C   ++D
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVD 412

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L   M   G+ P+ V +  L+
Sbjct: 413 RAESLLSKMRRDGIEPELVHYIPLL 437



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 220/406 (54%), Gaps = 10/406 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++AA    ++ A    P  ++Y+TL+  LC    T  A+ L  +M   +G      +PD 
Sbjct: 95  LDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM-QASG-----VRPDV 148

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLC    VDKA ELL +M +  I P+VV Y+ +++G+C A       ++F E
Sbjct: 149 VTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEE 208

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++P+VV ++ ++D LC+ GK+++A+Q+++ M++ G+ PN   YN L++  C  G 
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPTVVTY 238
           V  A  L  +M   G   +  +Y+ LI G     E++ A+ L  EM+     ++P VVT+
Sbjct: 269 VKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTF 328

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N++  GL +  ++ +AF++ D M  +G A +   +   I GL +   + +A+EL   +  
Sbjct: 329 NSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMAS 388

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E D  +YS LI+G CK  ++  A  L   + R  +  ++V Y  ++ ALC  G M++
Sbjct: 389 SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL-HRMDE 403
           A + F +M  K    D VA++T++ G  R  +     E L H +DE
Sbjct: 449 ARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE 493



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 120/238 (50%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +A  YNT++   C  G    A    + + +   +    SY+ L+   C  +    A+ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M + G++P VVTY TL  GL +   V++A +L  EM   G+  +   Y   + G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G      ++F  +     E D+  Y+ LID LC+ G++K A ++   +    L  +VVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           N++I+++C +G + +A  L  +M  KGVA D V +NTL+ G     E  + + LL  M
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           + S+    +  SY+ ++   C+      A      +++   +PT V+Y TL   L    +
Sbjct: 69  LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERR 128

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
             +A  L  +MQ  GV  D   Y T I GLC    + +A+EL R +     E ++  YSC
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSC 188

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L+ G CK+GR +   ++F  +    +  DVV Y  +I +LC +GK+ KA  +   M  +G
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + P+ V +N L+    +     + + L + M E+
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK 282


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 227/439 (51%), Gaps = 43/439 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++      P++++Y+TLINGLC+      A+ L  EM          C P++V
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG------CFPNSV 215

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             TT++DGLCK+G +D+A ELL  MK K  + DVV Y ++I GFC   + +  K LF EM
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  NVVT+S ++  LC+ G+ +EA+ +L  M + G+ P+   Y  L+DG C  GR 
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G + +  +Y++L++G CK   +  A  +   M+ KG K  VVTYNTL
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 242 FIGLFEIHQVERAFKLFDEM--QRHGVAADTWAYRTFIDGLCKNGYIVEALELFR----- 294
             GL +  +V+ A KLF+ M    + +  + + +   I GLCK G + +A+++ R     
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 295 ------------------------TLRILKCELDIR------SYSCLIDGLCKSGRLKIA 324
                                    + + K  LD+       +YS LIDG CK   L IA
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +    L   +  YN ++ +LC +G +++A  LF +M      PD ++FNT++ G
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575

Query: 385 CIRNNETSKVVELLHRMDE 403
            ++  +   V EL  +M E
Sbjct: 576 TLKAGDFQFVKELQMKMVE 594



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 217/401 (54%), Gaps = 8/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++   G   NV+TYS L++GLCR G    A      ++N   E G+   PD V YT 
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA----NTVLNAMAEHGI--HPDVVTYTG 324

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDGLCK+G    A +LL  M +K   P  VTYN ++ G C      +A ++   M+++G
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTGRVNR 183
            + +VVT++ +M  LC  GK++EA +L   M   +  + PN F +N L+ G C  GR+ +
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A ++   M   G   N+ +Y++L+ G  K  +I+ A+ L+ ++L  G  P   TY+ L  
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  ++  +  A  LF EM+ HG+    + Y T +  LCK G + +A  LF+ +    CE 
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           DI S++ +IDG  K+G  +   EL   +    L  D +T++ +I+ L   G++D+A    
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M A G  PD + +++L+ G     +T++++ LLH+M  +
Sbjct: 625 ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 221/427 (51%), Gaps = 31/427 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-------------- 47
           EA +LF     F   P+  T + L++ L R+ +  +A +++  M +              
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 48  -----------GNGEFGVVCKP----DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                      G G  G+V K     +  I   ++ GLC+ G V +A  L+ +M  K+++
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+V+YN++I G C A    EA  L +EM   G  PN VT + +MD LCK+G+M+EA +L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M + G   +  +Y TL+ GFC  G ++R KELF  M   G   NV +YS L++G C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             + + A ++ + M   GI P VVTY  L  GL +  +   A  L + M   G       
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL- 331
           Y   + GLCK G +++A ++ R +     + D+ +Y+ L+ GLC  G++  A +LF+S+ 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 332 -PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                L  +V T+N++I  LC +G++ KA  +   M  KG   + V +N L+ GC++  +
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476

Query: 391 TSKVVEL 397
             + +EL
Sbjct: 477 IKEAMEL 483



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 164/337 (48%), Gaps = 4/337 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +V+TY+TL+ GLC  G    AL LF  M +         +P+   +  +I GLCKE
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKE 439

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + KA ++  +M  K    ++VTYN ++ G   A    EA  L+ +++D G  PN  T+
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+++D  CK   +  A  L   M   G+ P  F YNTLM   C  G + +AK LF  M +
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             C+ ++ S++ +I+G  K  + +    L  +M+  G++P  +T++TL   L ++ +++ 
Sbjct: 560 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 619

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A    + M   G   D   Y + + GL   G   E + L   +      LD +  S ++ 
Sbjct: 620 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            LC S +     EL  +  +G      ++ N ++  L
Sbjct: 680 CLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 152/317 (47%)

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           D N+ P   T N ++     + +   A  ++  M    V P+  + S +++      K +
Sbjct: 67  DFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQ 126

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
               ++ L+++ G   N F+ N ++ G C  G V  A  L   M       ++ SY+ LI
Sbjct: 127 LGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLI 186

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CK K+++ A+ L  EM + G  P  VT  TL  GL +  +++ A +L + M++ G  
Sbjct: 187 NGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD 246

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           AD   Y T I G C NG +    ELF  +       ++ +YSCL+ GLC+ G+ K A  +
Sbjct: 247 ADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 306

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            +++    +  DVVTY  +I  LC DG+   A DL   M  KG  P  V +N L+ G  +
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366

Query: 388 NNETSKVVELLHRMDER 404
                   ++L  M E+
Sbjct: 367 EGLVIDAFKILRMMIEK 383



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 2/270 (0%)

Query: 137 MDELCK--NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +  LC+  N +  EA  L    +   + P+    N L+D    +     A  ++  M  +
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               +  S S LI  +   ++ +    +   +L +G    V   N +  GL     V  A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L  EM R  V+ D  +Y T I+GLCK   + EA+ L   +    C  +  + + L+DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK GR+  A EL  ++ +    ADVV Y  +I   C +G +D+  +LF +M  KG++ +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V ++ L+ G  R  +  +   +L+ M E 
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEH 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++    CEP++I+++T+I+G  + G       L  +M+    E G+  +PDA+
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV----EMGL--RPDAL 602

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T+I+ L K G +D+AK  L +M      PD + Y+S+++G     D+ E   L  +M
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             +G   +    S I+  LC + +  +  +LL    Q
Sbjct: 663 AAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 699


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  234 bits (596), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 218/388 (56%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P ++ +S L + + R GH    + L +E+     EF +  + D    + +I+  C    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEI-----EF-LGIEQDIHSLSILINCFCHLHRV 113

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D    +L ++    + P +VT+ +++ G C     ++   L+ +M+ +G+QPNV T++VI
Sbjct: 114 DFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ L K+GK  EA   L+ M ++G  PN   Y+TL+DG+CL G+++ A+ +F  M S GC
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV++Y+ L+NGYCK + IE A+ L  E L KG+ P +VT+ T+  GL    +   A +
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  +  HG   +   Y   +DGLCK+G + EA  LF+ ++    + ++  Y+ LID LC
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G++K   ELF  L    L  +V TY  ++ ALC +G + +AH LF  ME  G  PD  
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC 413

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           A+N ++ G +++ + S   +L+  M  R
Sbjct: 414 AYNVIIQGFLQHKDPSMARQLVEEMVNR 441



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 184/342 (53%), Gaps = 6/342 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++ +K+   G EP+++T++TL+NGLC  G     + L+++M+          +P+   Y 
Sbjct: 118 SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG------LQPNVYTYN 171

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            II+ L K G  ++A   L QM+     P+VV Y+++I G+C     +EA+ +F  M+ +
Sbjct: 172 VIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK 231

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PNV T++ +M+  CK  ++EEA QLL+  ++ G+ P+   + T++ G C  GR   A
Sbjct: 232 GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAA 291

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++LF  + + G   N+ +Y +L++G CK+  +E A +L+ EM    +KP +V Y  L   
Sbjct: 292 QQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDS 351

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  +++   +LF  +   G+  + + Y   +  LCK G I+EA +LFR +    C  D
Sbjct: 352 LCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             +Y+ +I G  +     +A +L   +      AD  T  ++
Sbjct: 412 KCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G E ++ + S LIN  C        L++  +++    + G+  +P  V +TT
Sbjct: 84  LSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL----KLGL--EPSIVTFTT 137

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++GLC EG +D+   L   M  + + P+V TYN +I     +  +NEA     +M   G
Sbjct: 138 LLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG 197

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNVV +S ++D  C  G+M+EA  + +LM+  G  PN + Y +LM+G+C   R+  A 
Sbjct: 198 CVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAV 257

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L       G   ++ +++ +I+G C+      A  L+  + + G  P ++TY  L  GL
Sbjct: 258 QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E AF LF EMQR  V  +   Y   ID LCK G I +  ELF  L     + ++
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L+  LCK G +  A +LF  +       D   YN++I           A  L  +
Sbjct: 378 YTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437

Query: 366 MEAKGVAPD 374
           M  +G + D
Sbjct: 438 MVNRGFSAD 446



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 7/282 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     +++  GC PNV+ YSTLI+G C  G    A ++F+ M++        C P+  
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG------CTPNVY 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++++G CK   +++A +LL +   K + PD+VT+ ++I G C A     A++LF  +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN++T+ V++D LCK+G +EEA  L + M +  V+PN  +Y  L+D  C  G++
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              KELF  +   G K NV++Y+ L+   CK   I  A  L+ +M   G  P    YN +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             G  +      A +L +EM   G +AD  A R  ++    N
Sbjct: 419 IQGFLQHKDPSMARQLVEEMVNRGFSADA-ATRALLNDFPTN 459



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 142/297 (47%)

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
           +  D ++A   F  M+ +   P +V FS +   + + G  E    L + +  +G+  +  
Sbjct: 39  WFKDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIH 98

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
             + L++ FC   RV+    +   +  +G + ++ +++ L+NG C   +++  + LY +M
Sbjct: 99  SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L +G++P V TYN +   L +  +   A     +M++ G   +   Y T IDG C  G +
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA  +F  +    C  ++ +Y+ L++G CK  R++ A +L     R  L+ D+VT+  +
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           I  LC  G+   A  LF  + A G  P+ + +  L+ G  ++    +   L   M  
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 6/173 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LF  + A G  PN++TY  L++GLC+ G+   A  LF+EM           KP+ 
Sbjct: 289 LAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST------VKPNL 342

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +ID LCK G +   KEL  ++ D+ + P+V TY +++   C      EA +LF +
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           M + G  P+   ++VI+    ++     A QL+E M+  G   +A     L D
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 214/431 (49%), Gaps = 28/431 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  LF       C P+ ITYSTLING C+      A  L +EM               I
Sbjct: 16  EAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII 75

Query: 47  NGNGEFGVV-------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            G  + G V             C P  + YT ++D LCK   +  A  +L  M +    P
Sbjct: 76  KGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP 135

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +VVTYN++I GFC   + +EA  LF +M++    P+V T+++++D  CK  + ++ ++LL
Sbjct: 136 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 195

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M++ G  PN   YNTLMD    +G+   A  L   M    CK + F+++++I+ +CK 
Sbjct: 196 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 255

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A  L+  M  +G  P + TYN +  G    ++++ A +L + M   G   D   Y
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 315

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            + + GLCK   + EA E++  LR     LD+ + S LIDGLCKS RL  A +L   + R
Sbjct: 316 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                DVV Y I+IH  C   ++DK+   F +M  KG  P  + ++ ++    ++     
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 435

Query: 394 VVELLHRMDER 404
              LL  M ER
Sbjct: 436 GCMLLKTMLER 446



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 199/357 (55%), Gaps = 6/357 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+VITY+ L++ LC++     A  + E+MI         C P+ V Y T+I+G CK G
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLG 151

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+A  L  QM + + +PDV TYN +I G+C      +  +L  EM+  G +PN +T++
Sbjct: 152 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 211

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +MD L K+GK  +A  L ++M++   +P+ F +N ++D FC  G+++ A ELF  M   
Sbjct: 212 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  ++++Y+I+I+G C+   I+ A  L   M   G  P VVTYN++  GL +  QV+ A
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           +++++ ++  G   D     T IDGLCK+  + +A +L R +       D+ +Y+ LI G
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            CK+ +L  +   F  +     +  V+TY+I+I  LC   ++     L   M  +GV
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 208/412 (50%), Gaps = 42/412 (10%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           L++   R      A +LF+  + G      +C PD++ Y+T+I+G CK     +A  LL 
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCG------LCSPDSITYSTLINGFCKARDFQQAYRLLD 57

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M+ + I P    YN++I+G C  N   ++  +    M +   P+V+T+++++D LCK+ 
Sbjct: 58  EMEKRGIVPHNAVYNTIIKGLC-DNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSA 116

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++ +AS +LE MI+ G  PN   YNTL++GFC  G ++ A  LF  M    C  +VF+Y+
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL---------FIGLF--------- 246
           ILI+GYCK +  +    L  EM+  G +P  +TYNTL         +I  F         
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 247 -----------------EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
                            ++ Q++ A++LF  M   G   D + Y   I G C+   I +A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            +L   +    C  D+ +Y+ ++ GLCK+ ++  A+E++  L  G    DVVT + +I  
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC   ++D A  L  +ME  G APD VA+  L+ G  + ++  K +     M
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 408



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 1/305 (0%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N ++  F     + EA  LF   +     P+ +T+S +++  CK    ++A +LL+ M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P+  VYNT++ G C  GRV+ A   +  M+   C  +V +Y+IL++  CK+  I  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  +  +M+  G  P VVTYNTL  G  ++  ++ A  LF++M  +  + D + Y   ID
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK     +  +L + +    CE +  +Y+ L+D L KSG+   A+ L   + R     
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
              T+N+MI   C  G++D A++LF  M  +G  PD   +N ++ G  R N      +LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 399 HRMDE 403
            RM E
Sbjct: 301 ERMTE 305



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 1/237 (0%)

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L+  F    +   A +LF +     C  +  +YS LING+CK ++ + A  L  EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +GI P    YNT+  GL +  +V+ A   + +MQRH  A     Y   +D LCK+  I +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A  +   +    C  ++ +Y+ LI+G CK G +  A  LF+ +       DV TYNI+I 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             C   +      L  +M   G  P+ + +NTLM   +++ +      L   M  R+
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 213/405 (52%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +AA L  +++A   GC P+ +TY+ +INGL R G    A  L + M           K  
Sbjct: 249 QAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-------KAS 301

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A  +  +I G    G V+KA  L L+M+++ I P VVTYN++I G   + +   A+  F+
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+++T++ +++  CK G ++EA  L   + + G+ P+   YN L+DG+C  G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  A+     M   GC+ +V +Y+IL+NG  K + +      + EMLSKG++P    YN
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYN 481

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T       +     AF+L + M   G+++DT  Y  F+DGLCK+G + +A  L+  +   
Sbjct: 482 TRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD 541

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D  +Y+CLI   C+ GRL+ A ++F  +    L    VTY + IHA C  G +  A
Sbjct: 542 GLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSA 601

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  F  M  +GV P+ V +N L+    R   T+   +  H M ER
Sbjct: 602 YGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 199/383 (51%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  +++  G  P V+TY+T+I+G+ R+G+   A   F EM       G++  PD +
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM----RAMGLL--PDLI 373

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+G CK G + +A  L   +K   + P V+TYN ++ G+C   D  EA+R   EM
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG QP+V T++++M+   K   +    +  + M+  G++P+ F YNT +    + G  
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGST 493

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M S G   +  +Y+I ++G CK+  ++ A  L+ +M+S G++P  +TY  L
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  ++  A  +FD M   G+      Y  FI   C+ G +  A   F+ +     
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI  LC+ GR  +A++ FH +    L  +  TY ++I   C +G  ++A  
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L+ +M   G+ PD    N L  G
Sbjct: 674 LYSEMHQHGIHPDHCTHNALFKG 696



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 166/322 (51%), Gaps = 3/322 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M    + P +   N V+R        ++ + ++ EM+  G++P++VT++ ++D   + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 145 KMEEASQLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           ++++A++LL  M     G  P+   YN +++G    G + +A +L   M  M  K + F+
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFT 304

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ LI GY     +E A +L  EM ++GI PTVVTYNT+  G+F    VE A   F EM+
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   Y + I+G CK G + EAL LF  L+       + +Y+ L+DG C+ G L+
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A      +       DV TY I+++       +    + F +M +KG+ PDC A+NT +
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI 484

Query: 383 LGCIRNNETSKVVELLHRMDER 404
              +    TS+  +L   M  R
Sbjct: 485 SAELILGSTSEAFQLTEVMISR 506



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 178/396 (44%), Gaps = 72/396 (18%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ- 124
           ++  L  E   D  + +  +M    I P +VTYN+++  F      ++A +L  EM  + 
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261

Query: 125 -GVQPNVVTFSVIMDELCKNGKMEEASQLLELM--------------------------- 156
            G  P+ VT++V+++ L + G++E+A+QL++ M                           
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKA 321

Query: 157 --IQI-----GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +Q+     G+ P    YNT++ G   +G V  A+  FV M +MG   ++ +Y+ LING
Sbjct: 322 GALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLING 381

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE--RAFK----------- 256
           YCK   ++ AL L+ ++   G+ P+V+TYN L  G   +  +E  R FK           
Sbjct: 382 YCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPD 441

Query: 257 ----------------------LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
                                  FDEM   G+  D +AY T I      G   EA +L  
Sbjct: 442 VSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTE 501

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       D  +Y+  +DGLCKSG LK A+ L+  +    L  D +TY  +IHA C  G
Sbjct: 502 VMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERG 561

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           ++ +A D+F  M   G+ P  V +   +   C R N
Sbjct: 562 RLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGN 597



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 126/254 (49%), Gaps = 7/254 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++ + G +P+   Y+T I+     G T  A  L E MI+           D V Y  
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG------ISSDTVTYNI 517

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            +DGLCK G +  A  L ++M    + PD +TY  +I   C      EA+ +F  M+  G
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+ VT++V +   C+ G +  A    + M++ GVRPN   YN L+   C  GR N A 
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           + F  M   G   N ++Y++LI+G CK    E A+ LYSEM   GI P   T+N LF G 
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG- 696

Query: 246 FEIHQVERAFKLFD 259
           F+  Q + A +  +
Sbjct: 697 FDEGQSKHAIQYME 710



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 5/287 (1%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM   GV P +   ++++  L    + ++   +   M+Q+G+ P+   YNTL+D F  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 178 TGRVNRAKELFVSMESM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPT 234
            GRV++A +L   ME+   GC  +  +Y+++ING  +  E+E A  L   M +SK  K +
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK--KAS 301

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             T+N L  G F    VE+A  L  EM+  G+      Y T I G+ ++G +  A   F 
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R +    D+ +Y+ LI+G CK+G LK A  LF  L R  L   V+TYNI++   C  G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +++A     +M  +G  PD   +  LM G  +    + V E    M
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 195/368 (52%), Gaps = 6/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +T++ L+NGLCRTGH    L + + M+    E       D   Y ++I GLCK G +
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL------DVYTYNSLISGLCKLGEI 353

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A E+L  M  ++  P+ VTYN++I   C  N    A  L   +  +GV P+V TF+ +
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC     E A +L E M + G  P+ F Y+ L++  C   R+  A  L   ME  GC
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV  Y+ LI+G CKN  +  A  ++ +M   G+  + VTYNTL  GL +  +VE A +
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D+M   G+  D + Y T +   C+ G I  A ++ + + +  CE DI +Y  LI GLC
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+GR+ +A +L  S+    ++     YN +I ALC   +  +A  LF +M  KG  PD +
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVI 653

Query: 377 AFNTLMLG 384
            +  +  G
Sbjct: 654 TYKIVFRG 661



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 204/397 (51%), Gaps = 8/397 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L +K+ A    P+V T++ LI  LC+      A+ + E+M N    +G+  +PD   +T
Sbjct: 185 TLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN----YGL--RPDEKTFT 238

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +E  V+ A  +   M +       V+ N ++ G C      EA R   E  ++
Sbjct: 239 TLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EE 296

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+ VTF+ +++ LC+ G +++  ++++ M++ G   + + YN+L+ G C  G ++ A
Sbjct: 297 GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEA 356

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E+   M S  C+ N  +Y+ LI   CK   +E A  L   + SKG+ P V T+N+L  G
Sbjct: 357 VEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQG 416

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L      E A +LF+EM+  G   D + Y   I+ LC    + EAL L + + +  C  +
Sbjct: 417 LCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARN 476

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y+ LIDGLCK+ R+  A ++F  +    +    VTYN +I+ LC   ++++A  L  
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M  +G+ PD   + T++    +  +  +  +++  M
Sbjct: 537 QMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 188/403 (46%), Gaps = 40/403 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   + +  CEPN +TY+TLI  LC+  H   A  L   + +     GV+  PD  
Sbjct: 355 EAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSK----GVL--PDVC 408

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++I GLC     + A EL  +MK+K  +PD  TY+ +I   C      EA  L  EM
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   NVV ++ ++D LCKN ++ +A  + + M  +GV  ++  YNTL++G C + RV
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G K + F+Y+ ++  +C+  +I+ A  +   M   G +P +VTY TL
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V+ A KL   +Q  G+     AY   I  LCK     EA+ LFR +     
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGD 648

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y  +  GLC  G                                  G + +A D
Sbjct: 649 PPDVITYKIVFRGLCNGG----------------------------------GPIQEAVD 674

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ++M  KG+ P+  +F  L  G    +    +++L++ + E+
Sbjct: 675 FTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 174/346 (50%), Gaps = 2/346 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KPD   Y   +  L K   +   + L  +M    + PDV T+N +IR  C A+    A  
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M + G++P+  TF+ +M    +   +E A ++ ELM++ G    +   N L++G C
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR+  A   F+  E   C   V +++ L+NG C+   I+  L +   ML KG +  V 
Sbjct: 281 KEGRIEEALR-FIYEEEGFCPDQV-TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN+L  GL ++ +++ A ++   M       +T  Y T I  LCK  ++  A EL R L
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +++ LI GLC +   +IA ELF  +       D  TY+I+I +LC++ ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +A  L  +ME  G A + V +NTL+ G  +NN      ++  +M+
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 158/324 (48%), Gaps = 8/324 (2%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            LL  +D  + PD   YN  +     AN     + L  +M+   V P+V TF++++  LC
Sbjct: 151 FLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALC 210

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAKELFVSMESMGCKH 198
           K  ++  A  +LE M   G+RP+   + TLM GF     V    R KEL V  ES GC+ 
Sbjct: 211 KAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV--ES-GCEL 267

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
              S ++L+NG CK   IE AL    E   +G  P  VT+N L  GL     +++  ++ 
Sbjct: 268 TSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMM 325

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           D M   G   D + Y + I GLCK G I EA+E+   +    CE +  +Y+ LI  LCK 
Sbjct: 326 DFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKE 385

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             ++ A EL   L    ++ DV T+N +I  LC     + A +LF +M+ KG  PD   +
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTY 445

Query: 379 NTLMLGCIRNNETSKVVELLHRMD 402
           + L+          + + LL  M+
Sbjct: 446 SILIESLCSERRLKEALMLLKEME 469



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 15/296 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  GC  NV+ Y+TLI+GLC+      A ++F++M     E   V +  +V
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM-----EMLGVSR-SSV 513

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+GLCK   V++A +L+ QM  + + PD  TY ++++ FC   D   A  +   M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT+  ++  LCK G+++ AS+LL  +   G+      YN ++   C   R 
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A  LF  M   G   +V +Y I+  G C     I+ A+    EML KGI P   ++  
Sbjct: 634 KEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGF 693

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFI------DGLCKNGYIVE 288
           L  GL  +   +   +L + +   G    ++T   R F+      D L   G I++
Sbjct: 694 LAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIRGFLKIQKFNDALANLGAILD 749



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 138/302 (45%), Gaps = 11/302 (3%)

Query: 110 DSNEAKRLFIEMMDQGVQPNVVT----FSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           DS+ A  LF        QPN       F  ++ +L + G  +    LL  M    +  + 
Sbjct: 71  DSSSALSLF---QWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDE 127

Query: 166 FVYNTLMDGFCLTGRVN-RAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
             +   ++ +  +  ++     LF+ ME     K +   Y++ ++   K  +++   +L+
Sbjct: 128 STFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLH 187

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           S+M++  + P V T+N L   L + HQ+  A  + ++M  +G+  D   + T + G  + 
Sbjct: 188 SKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEE 247

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             +  AL +   +    CEL   S + L++GLCK GR++ A    +         D VT+
Sbjct: 248 ADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTF 305

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +++ LC  G + +  ++   M  KG   D   +N+L+ G  +  E  + VE+LH M  
Sbjct: 306 NALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVS 365

Query: 404 RN 405
           R+
Sbjct: 366 RD 367



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 13/211 (6%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA------ 254
           FS S L++   +  +   ALSL+        +P    + ++F  L  + Q+ RA      
Sbjct: 57  FSPSQLLDLLRRQPDSSSALSLFQ---WASAQPNYSAHPSVFHEL--LRQLARAGSFDSM 111

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI-VEALELFRTL-RILKCELDIRSYSCLI 312
             L  +M    +  D   +  F++    + ++  E   LF  + R    + D R Y+  +
Sbjct: 112 LTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVAL 171

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             L K+ +LK+   L   +    +  DV T+NI+I ALC   ++  A  +  DM   G+ 
Sbjct: 172 SLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLR 231

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD   F TLM G I   +    + +   M E
Sbjct: 232 PDEKTFTTLMQGFIEEADVEGALRIKELMVE 262


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 215/401 (53%), Gaps = 11/401 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   GC P+ +TY+T+++ LC+ G    A  L        G F    KP   +
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-------AGRF----KPSVPV 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDG+CKEG ++ A +LL +M D  ++P+VV+Y+ +I   C + +   A  LF +M 
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   N+ TF+ ++      GK+ EA  L +LMIQ G  PN   YNTL+ G C  G + 
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M+  GC  NV +YSILI+G+ K+ ++ GA   ++ M+S G +P VVTY  + 
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMV 426

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +    ++A  L ++M   G   +T  + TFI GLC NG +  A++L   ++   C 
Sbjct: 427 DVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCL 486

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +Y+ L+D L +  + + A+ LF  +    L  ++VTYN +++     G M +A  L
Sbjct: 487 PNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQL 546

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F     +G APD + +NT++    +  +     +L+ R+  
Sbjct: 547 FGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 11/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++  FGC+P V  Y+ L++ L       +   L+  M     + G++  P+  
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM----KKDGLI--PNVF 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LCK   VD A +L ++M +K   PD VTY +++   C A   ++A+ L    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V  ++ ++D +CK G++E A +LL  M+  GV PN   Y+ +++  C++G V
Sbjct: 241 -----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   GC  N+ +++ LI G     ++  AL L+  M+  G +P VV YNTL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +E A ++ D+MQR G   +   Y   IDG  K+G +V A E +  +    C
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+C++D LCK+     A  L   +       + +T+N  I  LC +G+++ A  
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   M+  G  P+   +N L+    R N+  +   L   ++ RN
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 7/347 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF ++   GC+ N+ T++ LI G    G    AL+L++ MI         C+P+ V 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG------CEPNVVA 351

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I GLC  G +++A ++  QM+     P+V TY+ +I GF  + D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PNVVT++ ++D LCKN   ++A+ L+E M   G  PN   +NT + G C  GRV 
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M+  GC  N+ +Y+ L++   +  + E A  L+ E+ ++ ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-C 301
            G      +  A +LF +    G A D+  Y T I   CK G +  A +L   +  +K  
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             DI +Y+ LI G C    ++ A           +  +  T+N ++ 
Sbjct: 592 HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 179/408 (43%), Gaps = 65/408 (15%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A  Y  +I+ L +E  +D  + +L QMK   IN     +  +I G+     + +A ++F 
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + + G +P V  ++ ++D L    K +  + L   M + G+ PN F YN L+   C   
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 180 RVNRAKELFVSMESMGC------------------------------KHNVFSYSILING 209
           RV+ A +LFV M + GC                              K +V  Y+ LI+G
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDG 253

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV--- 266
            CK   IE A+ L  EM+  G+ P VV+Y+ +   L     VE AF LF +M   G    
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313

Query: 267 -------------------AADTW-------------AYRTFIDGLCKNGYIVEALELFR 294
                              A D W             AY T I GLC NG + EAL++  
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCD 373

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  ++ +YS LIDG  KSG L  A E ++ +       +VVTY  M+  LC + 
Sbjct: 374 QMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNS 433

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             D+A+ L   M  +G  P+ + FNT + G   N      ++LL RM 
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 9/265 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A+  + ++ + GC PNV+TY+ +++ LC+      A +L E+M + G       C P+ +
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG-------CTPNTI 455

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I GLC  G V+ A +LL +M+     P++ TYN ++      N   EA  LF E+
Sbjct: 456 TFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +QPN+VT++ ++    + G M EA QL    +  G  P++  YNT++  +C  G+V
Sbjct: 516 EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575

Query: 182 NRAKELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A +L   + SM   H ++ +Y+ LI G C    IE A++   + +++GI P   T+N 
Sbjct: 576 KIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG 265
           L    F+         + D++ R G
Sbjct: 636 LVRCFFDSLGHMGPIHILDDILRKG 660



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 9/138 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF-EEMINGNGEFGVVCKPDA 60
           EA  LF +++A   +PN++TY+T++ G  R G    AL LF + ++ G         PD+
Sbjct: 507 EAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA-------PDS 559

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y T+I   CK+G V  A +L+ ++   K  +PD++TY S+I G C   +  EA     
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 120 EMMDQGVQPNVVTFSVIM 137
           + ++QG+ PN  T++ ++
Sbjct: 620 KAINQGICPNFATWNALV 637



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K    G  P+ ITY+T+I+  C+ G   +A  L E  ++   E+     PD +
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER-VSSMKEW----HPDII 596

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
            YT++I G C    +++A   L +  ++ I P+  T+N+++R F
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 204/369 (55%), Gaps = 9/369 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N+ T++  INGLCR G     LN  E+ I     +G+   P+ V Y T++DG CK G   
Sbjct: 199 NLNTFNIFINGLCRAGK----LNKAEDAIEDMKAWGI--SPNVVTYNTLVDGYCKRGSAG 252

Query: 78  K---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           K   A+  + +M    I P+ VT+N++I GFC   +   AK+ F EM  QG++PN+VT++
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +++ LC NGK+EEA  L + M+ +G++PN   YN L++GFC    +  A ++F  +   
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               NV +++ +I+ YCK   +E   SL S ML +GI P V TYN L  GL     ++ A
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L +EM+  G+  D   Y   IDGLCKN     A +L   +  L  + +  +Y+ L+DG
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            C  G+LK A  +   + +     +VVTYN++I   C   K++ A+ L  +M  KG+ P+
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552

Query: 375 CVAFNTLML 383
              ++ + L
Sbjct: 553 RTTYDIVRL 561



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 213/405 (52%), Gaps = 9/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   FT+ K +G + ++ + + L++ L +         +++EMI            +   
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR------IHTNLNT 202

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC---YANDSNEAKRLFI 119
           +   I+GLC+ G ++KA++ +  MK   I+P+VVTYN+++ G+C    A    +A+    
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+   + PN VTF+ ++D  CK+  +  A +  E M + G++PN   YN+L++G C  G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++  A +L+  M  +G K N+ +Y+ LING+CK K ++ A  ++ ++  + + P V+T+N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T+     +   +E  F L   M   G+  +   Y   I GLC+   +  A EL   +   
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+ +Y+ LIDGLCK+ + + A +L + +    L  + VTYN ++   C +GK+  A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++   ME +   P+ V +N L+ G  + N+      LL+ M E+
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 171/325 (52%), Gaps = 18/325 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++ A    PN +T++TLI+G C+  +   A   FEEM           KP+ V
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG------LKPNIV 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC  G +++A +L  +M    + P++VTYN++I GFC      EA ++F ++
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q + PNV+TF+ ++D  CK G MEE   L   M+  G+ PN   YN L+ G C    +
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDL 429

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKEL   ME+ G K +V +Y+ILI+G CKN +   A  L +EM + G+KP  VTYNTL
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEALEL-- 292
             G     +++ A  +   M++     +   Y   I G CK       NG + E LE   
Sbjct: 490 MDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549

Query: 293 ---FRTLRILKCELDIRSYSCLIDG 314
                T  I++ E+  + +S  I+G
Sbjct: 550 NPNRTTYDIVRLEMLEKGFSPDIEG 574


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 197/373 (52%), Gaps = 27/373 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+ A G + N ++Y TLINGLC+ G T  AL     +       G + +PD V
Sbjct: 100 KALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRID------GKLVQPDVV 153

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TIIDGLCK+  V+ A  L  +M  K I P VVTYN++I G C      +A  L  +M
Sbjct: 154 MYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKM 213

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P V TFS+++D  CK GKM+EA  +  +M++  V+PN   YN+LMDG  L   V
Sbjct: 214 ILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVV 273

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AK +F +M  M                     ++ A++L+ EM  K I P +V YN+L
Sbjct: 274 KKAKSIFNTMIKM---------------------VDEAMNLFEEMHFKQIYPDMVIYNSL 312

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A K   EM   G   D + Y + +D LCKN ++ +A+EL   L+    
Sbjct: 313 IDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGI 372

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ LI+GLCKSGRLK A ++F  L       DV TYN MI   C  G  D+   
Sbjct: 373 QPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLA 432

Query: 362 LFLDMEAKGVAPD 374
           +   M+  G +PD
Sbjct: 433 MVSKMKDSGCSPD 445



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 207/414 (50%), Gaps = 22/414 (5%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDAVIY 63
           +L  +++  G   N++T S LIN   + G   ++ ++F  ++  G G        DA+ +
Sbjct: 33  SLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGS-------DAITF 85

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           TT+I GLC +G + KA     ++  +    + V+Y ++I G C    +  A      +  
Sbjct: 86  TTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDG 145

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           + VQP+VV ++ I+D LCK+  + +A  L   M+   + P+   YNTL+ G C+  ++  
Sbjct: 146 KLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKD 205

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M        V+++SILI+ +CK  +++ A ++++ M+ + +KP +VTYN+L  
Sbjct: 206 AIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMD 265

Query: 244 G------------LFE--IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G            +F   I  V+ A  LF+EM    +  D   Y + IDGLCK+G    A
Sbjct: 266 GHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYA 325

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           L+    +       DI +Y+ L+D LCK+  +  A EL   L    +   V TYNI+I+ 
Sbjct: 326 LKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILING 385

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LC  G++  A  +F D+  KG   D   +N ++ G  +     + + ++ +M +
Sbjct: 386 LCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKD 439



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 172/361 (47%), Gaps = 14/361 (3%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  I+  L K         L  QM+   +  ++VT + +I  +     +  +  +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G   + +TF+ ++  LC  G++ +A    + ++  G + N   Y TL++G C 
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+   A E    ++    + +V  Y+ +I+G CK+K +  A +LY EM++K I P+VVT
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  GL  + Q++ A  L  +M    +    + +   ID  CK G + EA  +F  + 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV--------------LIADVVTY 343
               + +I +Y+ L+DG      +K A  +F+++ + V              +  D+V Y
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIY 309

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I  LC  G+   A     +M  +G  PD   +N+L+    +N    K +ELL ++ +
Sbjct: 310 NSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKD 369

Query: 404 R 404
           +
Sbjct: 370 Q 370



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 20/297 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++ A    P+V+TY+TLI GLC       A+ L  +MI  +        P   
Sbjct: 170 DAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILED------INPTVY 223

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--- 118
            ++ +ID  CKEG + +AK +   M  +++ P++VTYNS++ G    N   +AK +F   
Sbjct: 224 TFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM 283

Query: 119 IEMMDQG-----------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           I+M+D+            + P++V ++ ++D LCK+G+   A + +  M   G  P+ F 
Sbjct: 284 IKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFT 343

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN+L+D  C    V++A EL   ++  G + +V +Y+ILING CK+  ++ A  ++ ++L
Sbjct: 344 YNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLL 403

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            KG    V TYN +  G  +    +    +  +M+  G + D       I  L   G
Sbjct: 404 VKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKG 460



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 14/333 (4%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           +  KN  P +  +  ++     AN  +    L  +M   G+  N+VT S++++   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
              +  +   +++ G   +A  + TL+ G CL G +++A      + + G K N  SY  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK  +   AL     +  K ++P VV YNT+  GL +   V  AF L+ EM    
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +      Y T I GLC    + +A+ L   + +      + ++S LID  CK G++K A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 326 ELFHSLPRGVLIADVVTYNIMI--HALCADGK------------MDKAHDLFLDMEAKGV 371
            +F  + +  +  ++VTYN ++  H L    K            +D+A +LF +M  K +
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            PD V +N+L+ G  ++  T   ++ +  M  R
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYR 335



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 9/125 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE-MINGNGEFGVVCKPDA 60
           +A  L TKLK  G +P+V TY+ LINGLC++G    A  +FE+ ++ G          D 
Sbjct: 359 KAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNT-------DV 411

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I G CK+G  D+   ++ +MKD   +PD      +IR      ++++A + F E
Sbjct: 412 YTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FRE 470

Query: 121 MMDQG 125
           M+ +G
Sbjct: 471 MIVRG 475


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 220/405 (54%), Gaps = 9/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G +PNV+ YS L+ G CR+G       +FE+M       G+  KPD ++
Sbjct: 177 ALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDM----SRRGI--KPDVIM 230

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T +ID LCKEG   KA ++   M  + + P+VVTYN +I   C      EA  L  EM 
Sbjct: 231 FTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMD 290

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGR 180
           D+GV P+VVT++ ++  L    +M+EA   LE MIQ    V P+   +N+++ G C  GR
Sbjct: 291 DKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGR 350

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A ++   M   GC  N+ +Y+ LI G+ +  +++ A++L  E+   G++P   TY+ 
Sbjct: 351 MTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSI 410

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ +V+RA K    M++ G+ A+ + Y   +  +C+ G +  A+ LF  +    
Sbjct: 411 LINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KN 469

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +YS +I G CKSG +K   +L   +    L  D VTY+++I+     G +++A 
Sbjct: 470 CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAE 529

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +   M A G  PD   F++L+ G     +T KV++L+H M  +N
Sbjct: 530 RVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKN 574



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 214/409 (52%), Gaps = 16/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNV---ITYSTLINGLCRTG--HTIVALNLFEEMINGNGEFGVVC 56
           EA +L + L      P+V   ++Y+T++  LCR G  H   A +L  +M   + E     
Sbjct: 69  EACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDM---SREAHPAA 119

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P+AV YTT++ GLC      +A  LL  M+   +  DVVTY ++IRG C A++ + A  
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM   GVQPNVV +S ++   C++G+ ++  ++ E M + G++P+  ++  L+D  C
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+  +A ++   M   G + NV +Y++LIN  CK   +  AL+L  EM  KG+ P VV
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFR 294
           TYNTL  GL  + +++ A    +EM +    V  D   + + I GLCK G + +A+++  
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  ++ +Y+ LI G  +  ++K+A  L   L    L  D  TY+I+I+      
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++D+A      M  +G+  +   +  L+    +     + + L + MD+
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK 468



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 14/210 (6%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTV---VTYNTLFIGLFEI--HQVERAFKLF 258
           + L+N   +   +  A SL S +      P V   V+YNT+   L       + +A  L 
Sbjct: 55  AALLNRRLRGAPVTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLL 108

Query: 259 DEMQRHGVAA---DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +M R    A   +  +Y T + GLC +    EA+ L R+++      D+ +Y  LI GL
Sbjct: 109 VDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGL 168

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C +  L  A EL   +    +  +VV Y+ ++   C  G+      +F DM  +G+ PD 
Sbjct: 169 CDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDV 228

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + F  L+    +  +T K  ++   M +R 
Sbjct: 229 IMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+ +TYS LIN   + G    A  + ++M       G V  PD  ++ ++I G   E
Sbjct: 504 GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTAS----GFV--PDVAVFDSLIKGYSAE 557

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
           G  DK  +L+ +M+ KN+  D    +++IR
Sbjct: 558 GQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 213/409 (52%), Gaps = 8/409 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH------TIVALNLFEEMINGNGEFGVV 55
           E   L  KL +FGCEP++++Y+ ++ GLC           +V +    E ++   E G  
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG-- 253

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C PD  +Y TIIDG+CK+G  + A ++L +M    + P+VV YN+V++G C A    EA+
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM  +    + VTF++++D  C+NG ++   +LLE M++ G  P+   Y T+++GF
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V+ A  L  +M + GCK N  SY+I++ G C+ +    A  L S M+ +G  P  
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VT+NTL   + +    E+A +L  +M  +G + D  +Y T IDGL K G   EALEL   
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +   YS +   L + GR     ++F S+    + +D   YN +I +LC   +
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D+A D F  M + G  P+   +  L+ G        +  +LL  +  R
Sbjct: 554 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 74/459 (16%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-------------------INGNGEFGVV-- 55
           PN  TY  ++  LC  G    AL + +EM                     G G    V  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 56  --------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                   C  D+     ++  +C++G VD+  ELL ++      PD+V+YN+V++G C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 108 ANDSNEAKRLFIEMM----------DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           A   ++ + L +EM+          + G  P++  ++ I+D +CK+G  E A+ +L  M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 158 QIGVRPNAFVYNTLMDG-----------------------------------FCLTGRVN 182
             G++PN   YNT++ G                                   FC  G V+
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R  EL   M   GC  +V +Y+ +ING+CK   ++ A+ L   M + G KP  ++Y  + 
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL    +   A +L   M + G   +   + T I+ +CK G   +A+EL + + +  C 
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ M  AL  +G+ DK   +
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  ++   V  D   +N ++    +  ET + ++    M
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 564



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 194/444 (43%), Gaps = 58/444 (13%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL T   A G    V+ Y+ +I G CR G    A  L            V   P+A  
Sbjct: 64  ARALDTAGDAAG----VVAYNAMIAGYCRAGQVAAARRLAAA---------VPVPPNAYT 110

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  I+  LC  G +  A  +L +M  +         + ++   C       A R    + 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   +    ++++  +C+ G ++E  +LL  +   G  P+   YN ++ G C+  R +
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 183 RAKELFV----------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             +EL V           M   GC  ++  Y+ +I+G CK+   E A  + S M S G+K
Sbjct: 231 DVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 290

Query: 233 PTVVTYNTLFIGLFEIHQ-----------------------------------VERAFKL 257
           P VV YNT+  GL    +                                   V+R  +L
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 350

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            ++M  HG   D   Y T I+G CK G + EA+ L + +    C+ +  SY+ ++ GLC+
Sbjct: 351 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 410

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R   A EL   + +   + + VT+N +I+ +C  G  ++A +L   M   G +PD ++
Sbjct: 411 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLIS 470

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++T++ G  +  +T + +ELL+ M
Sbjct: 471 YSTVIDGLGKAGKTEEALELLNVM 494



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L + +   GC PN +T++TLIN +C+ G    A+ L ++M +NG       C PD
Sbjct: 415 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG-------CSPD 467

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I P+ + Y+S+         +++  ++F 
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ +   ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 528 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 587

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A++L   + S     KH V  + I+
Sbjct: 588 LVREAQDLLSELCSRRAVRKHLVRHFGIV 616



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 16/243 (6%)

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + L+   C  GR   A     ++++ G    V +Y+ +I GYC+  ++  A  L + +  
Sbjct: 48  SALIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             + P   TY  +   L     +  A  + DEM   G AA        ++  C+ G    
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A+   + L    C LD  + + ++  +C+ G +    EL   LP      D+V+YN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 349 ALCADGKMD----------KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LC   + D          + H+    M   G  PD   + T++ G  ++       ++L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 399 HRM 401
            RM
Sbjct: 282 SRM 284


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 225/436 (51%), Gaps = 36/436 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG----------- 50
           EAA  F  + A G +PN++TYS L++G    G  +  LNLF  M  GNG           
Sbjct: 350 EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM-EGNGIVADQRVFNIV 408

Query: 51  ---------------------EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                                E GV+  PDA  Y  +I    + G +  A +   QM   
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVI--PDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEE 148
            + P+ + Y+S+I+GFC   +  +AK L  EMM +G+ +PN+V F+ I++ LCK G++ E
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A  + + +I IG RP+   +N+L+DG+ L G++ +A  +  +M S G + +V SY+ LI+
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           GYC+N  I+  L L+ EMLSKG+KPT +TY  +  GLF   +   A K+  EM   G   
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D       + GLC+N    EA+ +F+ L  +  + +I   + +ID + K  + + A ELF
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELF 706

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
            S+    L+ +  TY +MI  L  +G +++A ++F  ME  G AP     N ++   +  
Sbjct: 707 DSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEK 766

Query: 389 NETSKVVELLHRMDER 404
            E  K    + ++D +
Sbjct: 767 GEIVKAGNYMFKVDGK 782



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 205/381 (53%), Gaps = 7/381 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K+ GC PNV+TY+T+I+GL R G    A NLF EM+    + GVV  PD V YT+IID L
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMM----QQGVV--PDVVTYTSIIDAL 272

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK   +DKA+ +L QM      P+ VTYN +I G+  +    E   +F EM  QG+ PN+
Sbjct: 273 CKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNI 332

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT +  M  LCK+GK +EA++  + M   G +PN   Y+ L+ G+   G       LF S
Sbjct: 333 VTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS 392

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           ME  G   +   ++I+I+ Y K   ++  + ++++M  +G+ P   TY  +      + +
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC-ELDIRSYS 309
           +  A   F++M   G+  +   Y + I G C +G +V+A EL   +        +I  ++
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +I+ LCK GR+  A ++F  +       DV+T+N +I      GK++KA  +   M + 
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISA 572

Query: 370 GVAPDCVAFNTLMLGCIRNNE 390
           G+ PD V++NTL+ G  RN  
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGR 593



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 194/380 (51%), Gaps = 5/380 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   G EP+ I+Y+T++  LC    +  AL+L   M+  +G     C P+ V Y T
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGG----CSPNVVTYNT 232

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL +EG V KA  L  +M  + + PDVVTY S+I   C A   ++A+ +  +M+  G
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            QPN VT++ ++     +G+ +E + +   M   G+ PN    N+ M   C  G+   A 
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E F SM + G K N+ +YS+L++GY         L+L++ M   GI      +N +    
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++    +F +MQ  GV  D   Y   I    + G + +A++ F  +  +  + + 
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             Y  LI G C  G L  A EL    + RG+   ++V +N +I++LC +G++ +AHD+F 
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            +   G  PD + FN+L+ G
Sbjct: 533 FVIHIGERPDVITFNSLIDG 552



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+V+TY+++I+ LC+      A  +  +MI+ NG      +P+ V
Sbjct: 245 KACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS-NG-----FQPNKV 298

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G    G   +   +  +M  + + P++VT NS +   C    S EA   F  M
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PN+VT+SV++      G   +   L   M   G+  +  V+N ++D +   G +
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +F  M+  G   +  +Y I+I  + +   +  A+  +++M++ G+KP  + Y++L
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWA-YRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM   G+       + + I+ LCK G +VEA ++F  +  + 
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +++ LIDG    G+++ A+ +  ++    +  DVV+YN +I   C +G++D   
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL 598

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M +KGV P  + +  ++ G   +  T    ++ H M E
Sbjct: 599 ILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 186/391 (47%), Gaps = 9/391 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P V TY+ L++  CRT    V   LF   +          K D ++ + ++  L      
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTG------LKMDVIVASILLKCLYHAKRS 170

Query: 77  DKAKELLL-QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ--GVQPNVVTF 133
           D    LLL +M +  + PD ++YN+V++  C  + S  A  L   M+ +  G  PNVVT+
Sbjct: 171 DDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTY 230

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  L + G++ +A  L   M+Q GV P+   Y +++D  C    +++A+ +   M S
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + N  +Y+ +I+GY  + + +    ++ EM S+G+ P +VT N+    L +  + + 
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A + FD M   G   +   Y   + G    G  V+ L LF ++       D R ++ +ID
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              K G +     +F  +    +I D  TY I+I A    G++  A D F  M A G+ P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + + +++L+ G   +    K  EL+  M  R
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSR 501



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  +   G  P+VIT+++LI+G    G    A  + + MI+   E      PD 
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIE------PDV 578

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+IDG C+ G +D    L  +M  K + P  +TY  ++ G      +  AK++  E
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ T  +I+  LC+N   +EA  + + +  + V+ N  + NT++D      +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AKELF S+ + G   N  +Y ++I    K   +E A +++S M   G  P+    N 
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNY 758

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 759 IIRVLLEKGEIVKA 772



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEALELFRTLRILKC 301
             E A  LFDE+ R  +     +   F   L        C++G  + A+ LF   RI + 
Sbjct: 52  STEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSL-AVALFN--RICRE 108

Query: 302 ELDIR-------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           E   R       +Y+ L+D  C++ R  + + LF    +  L  DV+  +I++  L    
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAK 168

Query: 355 KMDKAHDLFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + D   +L L  M   GV PD +++NT++     ++ + + ++LLH M +++
Sbjct: 169 RSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKS 220



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A+F KL A   + N+   +T+I+ + +      A  LF+ +       G+V  P+A 
Sbjct: 666 EAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSI----SATGLV--PNAS 719

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  L KEG V++A  +   M+     P     N +IR      +  +A     ++
Sbjct: 720 TYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKV 779

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             + +     T S++M    + GK  E  +LL    Q
Sbjct: 780 DGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/364 (35%), Positives = 203/364 (55%), Gaps = 6/364 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+T+  +INGLC+ G    A ++ E+M      +G    P  + Y TIIDG CK G + 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDM----KAWGF--SPSVITYNTIIDGYCKAGKMF 281

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA  LL +M  K I+P+ +T+N +I GFC   +   AK++F EM  QG+QPNVVT++ ++
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LC NGK++EA  L + M  +G++PN   YN L++GFC    +  A+E+   +   G  
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +++ LI+ Y K   ++ A  L S ML  G+ P V TYN L +G      V+ A KL
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+ +G+ AD   Y   +D LCK G   +A+ L   +  +       +Y+ LIDG  +
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G    A  +   + +    A++VTYN++I   C  GK+++A+ L  +M  KG+ P+   
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581

Query: 378 FNTL 381
           ++ L
Sbjct: 582 YDIL 585



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +KA+G  P+VITY+T+I+G C+ G    A  L +EM+           P+ +
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEI 300

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +IDG C++  V  AK++  +M+ + + P+VVTYNS+I G C     +EA  L  +M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVVT++ +++  CK   ++EA ++L+ + + G+ PN   +NTL+D +   GR+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   NV +Y+ LI G+C+   ++ A  L  EM   G+K  +VTYN L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +  +A +L DEM   G+      Y   IDG  + G    AL +   +     
Sbjct: 481 VDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             +I +Y+ LI G C  G+L+ A  L + +    LI +  TY+I+   +   G
Sbjct: 541 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 177/345 (51%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +++I   ++    K G +D A E   +  D       ++ N ++            + ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + +  NVVTF V+++ LCK GK ++A  ++E M   G  P+   YNT++DG+C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++ +A  L   M +     N  +++ILI+G+C+++ +  A  ++ EM  +G++P VVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N+L  GL    +++ A  L D+M   G+  +   Y   I+G CK   + EA E+   +  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +++ LID   K+GR+  A+ L   +    +  +V TYN +I   C +G + +
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  L  +ME  G+  D V +N L+    +  ET K V LL  M E
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 156/286 (54%), Gaps = 6/286 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +++  G +PNV+TY++LINGLC  G    AL L ++M       G+  KP+ V 
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS------GMGLKPNVVT 371

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+G CK+  + +A+E+L  +  + + P+V+T+N++I  +  A   ++A  L   M+
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D GV PNV T++ ++   C+ G ++EA +L + M   G++ +   YN L+D  C  G   
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  L   M  +G   +  +Y+ LI+GY +      AL++ + M  KG +  +VTYN L 
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLI 551

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G     ++E A +L +EM   G+  +   Y    D + + G+I +
Sbjct: 552 KGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 3/278 (1%)

Query: 129 NVVTFSVIMDELCKNGKMEEAS--QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           N      ++D   KN     ++    L ++   G   N+ + + L+  +   G ++ A E
Sbjct: 122 NYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGC-ANSIIVDMLVWAYVKNGEMDLALE 180

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            F      G + +  S + ++    K   I    S+Y EM+ + I   VVT++ +  GL 
Sbjct: 181 GFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLC 240

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++ + ++A  + ++M+  G +     Y T IDG CK G + +A  L + +   +   +  
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +++ LIDG C+   +  A ++F  + R  L  +VVTYN +I+ LC++GK+D+A  L   M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              G+ P+ V +N L+ G  +     +  E+L  + +R
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 216/401 (53%), Gaps = 6/401 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  ++++ G  PN+ T++  I  L R G    A  + + M +        C PD V YT
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG------CGPDVVTYT 301

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +ID LC  G ++ AKEL L+MK  +  PD VTY +++  F    D +  K  + EM   
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VVTF++++D LCK GK++EA   L++M + GV PN   YNTL+ G     R++ A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ELF SMES+G +   ++Y + I+ Y K+ E   A+  + +M + GI P +V  N     
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYS 481

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L E  ++E A + F+ +++ G+A D   Y   +    K G + +A++L   +    C+ +
Sbjct: 482 LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LID L K+ R+  AW++F  +    L   VVTYN ++  L  +G++ +A  LF 
Sbjct: 542 VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M A    P+ ++FNTL+    +N E    +++L RM E N
Sbjct: 602 GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN 642



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 205/416 (49%), Gaps = 30/416 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
           EA  +  ++   GC P+V+TY+ LI+ LC  G    A  LF +M                
Sbjct: 280 EAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLL 339

Query: 46  --INGNGEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              + +G+   + +           PD V +T +ID LCK G VD+A   L  MK + + 
Sbjct: 340 DKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVA 399

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++ TYN++I G    N  +EA  LF  M   G++    T+ + +D   K+G+  +A + 
Sbjct: 400 PNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKT 459

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M   G+ PN    N  +      GR+  AKE F  ++  G   +  +Y+IL+  Y K
Sbjct: 460 FEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGK 519

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L SEM   G  P VV  N+L   L++  +V+ A+K+F  M+   +A     
Sbjct: 520 AGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVT 579

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL K G + EA  LF+ +    C  +  S++ L+D LCK+G + +A ++   + 
Sbjct: 580 YNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMT 639

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
                 DV+TYN +I+ L  + +++ A  LF  M+ K + PD V   TL+ G I++
Sbjct: 640 EMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKD 694



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 213/440 (48%), Gaps = 44/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ALF  + A  C PN I+++TL++ LC+ G   +AL +   M   N      C PD +
Sbjct: 595  EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN------CFPDVL 648

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
             Y T+I GL KE  V+ A  L  QMK K I PD VT  +++ G        +A R+    
Sbjct: 649  TYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEF 707

Query: 118  -----------FIEMMDQGV------------QPNVVTFSVIMDE---------LCKNGK 145
                       F E +  G+              ++V  ++  D+         LCK+GK
Sbjct: 708  VHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGK 767

Query: 146  MEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
              +A  + L+L     + P+   YN+L+DG         A  LF  M++ GC  +VF+Y+
Sbjct: 768  AVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYN 827

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            + ++   K+ +I+    LY EML +G KP  +T+N +  GL + + +++A  L+ ++   
Sbjct: 828  LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG 887

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
              +   W Y   IDGL K G + EA + F  +    C  +   Y+ L++G  K G ++ A
Sbjct: 888  DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             ELF  + +  +  D+ +Y+IM+  LC  GK+D A   F +++  G+ PD V +N ++ G
Sbjct: 948  CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMING 1007

Query: 385  CIRNNETSKVVELLHRMDER 404
              R+    + + L   M  R
Sbjct: 1008 LGRSQRVEEALSLFDEMRNR 1027



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 201/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K++  G   N  +Y  LI+ L ++G    AL ++  M++         KP   
Sbjct: 175 EAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEG------IKPSLK 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++  L K   ++    LL +M+   + P++ T+   IR    A   +EA  +   M
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+VVT++V++D LC  GK+  A +L   M     +P+   Y TL+D F   G +
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  KE +  ME+ G   +V +++ILI+  CK  +++ A      M  +G+ P + TYNTL
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +++++ A +LF+ M+  G+    + Y  FID   K+G   +A++ F  ++    
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L + GRL+ A E F+ L +  L  D +TYNI++      G++D A  
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +ME  G  P+ V  N+L+    + +   +  ++  RM E
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            L+  LC+ G  + A N+F ++            P    Y ++IDGL K    + A  L  
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKS-----FCITPSLEAYNSLIDGLLKARLTEMAWGLFY 812

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +MK+    PDV TYN  +     +    E   L+ EM+ +G +PN +T ++++  L K+ 
Sbjct: 813  KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +++A  L   ++     P  + Y  L+DG    GR+  AK+ F  M   GC  N   Y+
Sbjct: 873  SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            IL+NG+ K  ++E A  L+  M+ +GI+P + +Y+ +   L  + +V+ A   F+E++  
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D   Y   I+GL ++  + EAL LF  +R      D+ +Y+ LI  L  +G ++ A
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             +++  L    L  +V TYN +I      G  D+A+ ++  M   G  P+   F  L
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 204/431 (47%), Gaps = 34/431 (7%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEF----- 52
            A  LF ++K     P+ +T  TL+ G+ + G    A  + +E ++      +G F     
Sbjct: 666  AFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLM 724

Query: 53   ---------------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKN 90
                                   +C+ D+V+   ++  LCK G    A  + L++ K   
Sbjct: 725  GGILIEAEIGQSILFAESLVCNTICEDDSVL-IPLVKFLCKHGKAVDAYNVFLKLTKSFC 783

Query: 91   INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
            I P +  YNS+I G   A  +  A  LF +M + G  P+V T+++ +D L K+GK++E  
Sbjct: 784  ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843

Query: 151  QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
             L E M+  G +PN   +N ++ G   +  +++A +L+  + S       ++Y  LI+G 
Sbjct: 844  DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903

Query: 211  CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             K   +E A   + EML  G  P    YN L  G  +   VE A +LF  M + G+  D 
Sbjct: 904  LKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDL 963

Query: 271  WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +Y   +D LC  G + +AL  F  L++   + D+  Y+ +I+GL +S R++ A  LF  
Sbjct: 964  KSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDE 1023

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            +    +  D+ TYN +I  L   G +++A  ++ +++ KG+ P+   +N L+ G   +  
Sbjct: 1024 MRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083

Query: 391  TSKVVELLHRM 401
              +   +  +M
Sbjct: 1084 PDRAYAVYKKM 1094



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 185/408 (45%), Gaps = 44/408 (10%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R    +V  NL ++ I          K     Y TI   L   G + +A   L +M+   
Sbjct: 137 RVEDMVVVFNLMQKQI---------IKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
              +  +Y  +I     +    EA +++  M+ +G++P++ T+S +M  L K   +E   
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247

Query: 151 QLLELMIQIGVRPNAF-----------------------------------VYNTLMDGF 175
            LL+ M  +G+RPN +                                    Y  L+D  
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDAL 307

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G++N AKELF+ M++   K +  +Y  L++ +  + +++     +SEM + G  P V
Sbjct: 308 CNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDV 367

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VT+  L   L ++ +V+ AF   D M++ GVA +   Y T I GL +   + EALELF +
Sbjct: 368 VTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNS 427

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  L  E    +Y   ID   KSG    A + F  +    ++ ++V  N  +++L   G+
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR 487

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +++A + F  ++  G+APD + +N LM    +       ++LL  M+E
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA   F ++  +GC PN   Y+ L+NG  + G    A  LF  M+          +PD  
Sbjct: 911  EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG------IRPDLK 964

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y+ ++D LC  G VD A     ++K   ++PD+V YN +I G   +    EA  LF EM
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ T++ ++  L   G +EEA ++ E +   G+ PN F YN L+ G  ++G  
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
            +RA  ++  M   GC+ N  +++ L N
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A   F +LK  G +P+++ Y+ +INGL R+     AL+LF+EM N          PD  
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG------ITPDLY 1034

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I  L   G V++A ++  +++ K + P+V TYN++IRG   + + + A  ++ +M
Sbjct: 1035 TYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094

Query: 122  MDQGVQPNVVTFSVIMDE 139
            M  G +PN  TF+ + ++
Sbjct: 1095 MVGGCRPNTGTFAQLPNQ 1112



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 35/205 (17%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ +E  + +++ M  + IK ++ TY T+F  L+    +  A    ++M++ G   + ++
Sbjct: 135 HRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYS 194

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK--------------- 317
           Y   I  L K+G+  EAL+++R +     +  +++YS L+  L K               
Sbjct: 195 YIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEME 254

Query: 318 --------------------SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                               +G++  A+ +   +       DVVTY ++I ALC  GK++
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +LFL M+A    PD V + TL+
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLL 339



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 67/155 (43%)

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +VE    +F+ MQ+  +      Y T    L   G + EA      +R +   L+  SY
Sbjct: 136 RRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSY 195

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             LI  L KSG  + A +++  +    +   + TY+ ++ AL     ++    L  +ME+
Sbjct: 196 IGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMES 255

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G+ P+   F   +    R  +  +   +L RMD+
Sbjct: 256 LGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD 290


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 216/392 (55%), Gaps = 7/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY++LI+G+C+ G    A+ + ++MI         C P+ V Y T+I  LCKE
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE------CSPNTVTYNTLISALCKE 346

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             ++ A +L   +  K + PDV T+N++I+G C + + + A  +F EM ++G +P+  T+
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 406

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+++D LC   +++EA  LL+ M   G   NA VYNTL+DG C + R+  A+E+F  ME 
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G   +  +Y+ LI+G CKNK +E A  L  +M+ +G+KP   TYN+L      +  +E+
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M  +G   D + Y T I GLC+ G +  A +L R++++    L   +Y+ +I 
Sbjct: 527 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQ 586

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L    R K    LF  +       D +T+ I+   LC   G + +A D  ++M  KG+ 
Sbjct: 587 ALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGIL 646

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           P+  +F  L  G    +    ++EL++ + E+
Sbjct: 647 PEFPSFGFLAEGLCSLSMEDTLIELINMVMEK 678



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 204/383 (53%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   G  P+ +T+++L+NG CR G+   AL++ + MI    +      PD  
Sbjct: 246 EALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD------PDVY 299

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G+CK G  +KA E+L QM  +  +P+ VTYN++I   C  N+   A  L   +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+V TF+ ++  LC +   + A ++ E M   G +P+ F Y+ L+D  C   R+
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   MES GC  N   Y+ LI+G CK++ IE A  ++ +M   G+  + VTYNTL
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +VE A +L D+M   G+  D + Y + +   C+ G I +A ++ +T+    C
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E DI +Y  LI GLC++GR+ +A +L  S+    ++     YN +I AL    +  +   
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF +M  K   PD +    +  G
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRG 622



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 215/403 (53%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++  +GC    ++   L+NG C+ G    AL    E+     E G    PD V 
Sbjct: 212 ALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV----SEEGF--SPDQVT 265

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + ++++G C+ G V+ A +++  M +K  +PDV TYNS+I G C   +  +A  +  +M+
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PN VT++ ++  LCK  ++E A+ L  +++  G+ P+   +NTL+ G CL+   +
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E+F  M++ GCK + F+YSILI+  C  + ++ AL L  EM S G     V YNTL 
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  ++E A ++FD+M+  GV+  +  Y T IDGLCKN  + EA +L   + +   +
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ L+   C+ G ++ A ++  ++       D+ TY  +I  LC  G++D A  L
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              ++ KG+     A+N ++        T + + L   M E++
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKS 608



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 204/396 (51%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L +K+   G   +V T++ LI  LC+      A+ + EEM N         KPD + +TT
Sbjct: 145 LHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHG------LKPDEITFTT 198

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G  +EG ++ A ++  QM         V+   ++ GFC      EA R  +E+ ++G
Sbjct: 199 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEG 258

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+ VTF+ +++  C+ G + +A  +++ MI+ G  P+ + YN+L+ G C  G   +A 
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAI 318

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+   M    C  N  +Y+ LI+  CK  EIE A  L   ++SKG+ P V T+NTL  GL
Sbjct: 319 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                 + A ++F+EM+  G   D + Y   ID LC    + EAL L + +    C  + 
Sbjct: 379 CLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA 438

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ LIDGLCKS R++ A E+F  +    +    VTYN +I  LC + ++++A  L   
Sbjct: 439 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  +G+ PD   +N+L+    R  +  K  +++  M
Sbjct: 499 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 197/389 (50%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G +P+   Y+  +N L       +   L  +M+N     G+V   D   +  +I  LCK
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE----GIVL--DVSTFNVLIKALCK 170

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              +  A  +L +M +  + PD +T+ ++++GF    D N A ++  +M+  G     V+
Sbjct: 171 AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
             V+++  CK G++EEA + +  + + G  P+   +N+L++GFC  G VN A ++   M 
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +V++Y+ LI+G CK  E E A+ +  +M+ +   P  VTYNTL   L + +++E
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 350

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L   +   G+  D   + T I GLC +     A+E+F  ++   C+ D  +YS LI
Sbjct: 351 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC   RLK A  L   +       + V YN +I  LC   +++ A ++F  ME  GV+
Sbjct: 411 DSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              V +NTL+ G  +N    +  +L+ +M
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQM 499



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 2/345 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+A  + T+I       F +    L +   +    PD   YN  +      N     + L
Sbjct: 88  PNATTFATLIQSFT--NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+++G+  +V TF+V++  LCK  ++  A  +LE M   G++P+   + TLM GF  
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G +N A ++   M   GC     S  +L+NG+CK   +E AL    E+  +G  P  VT
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N+L  G   I  V  A  + D M   G   D + Y + I G+CK G   +A+E+ + + 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           + +C  +  +Y+ LI  LCK   ++ A +L   L    L+ DV T+N +I  LC     D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            A ++F +M+ KG  PD   ++ L+          + + LL  M+
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/242 (18%), Positives = 96/242 (39%), Gaps = 37/242 (15%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
           H +     L+    ++   +   +L  ++ S G  P   T+ TL       H++E   K+
Sbjct: 53  HPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKI 112

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            +     G   DT  Y   ++ L ++  +     L   +      LD+ +++ LI  LCK
Sbjct: 113 LE--NELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCK 170

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYN--------------------------------- 344
           + +L+ A  +   +    L  D +T+                                  
Sbjct: 171 AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230

Query: 345 --IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             ++++  C +G++++A    L++  +G +PD V FN+L+ G  R    +  ++++  M 
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290

Query: 403 ER 404
           E+
Sbjct: 291 EK 292


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  +   G  PN   ++ LIN   R G    A+ +FE+M N     G++  PD V + T
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFAT 300

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A      M D  + P    Y  +I+G C   +  +AK L  EMM++ 
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  V  FS I++ LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  +M S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KPT V Y+ +  G
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A K+F EM   G       Y   + GLC+N    EA  L   L  +  + D
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +E  G A D    N ++   +   E +K    L  + E N
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 641



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 206/413 (49%), Gaps = 48/413 (11%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P + TY+ LI+   R     + L +   ++ NG G       PD   Y+ +I G  K+G 
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 63

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VDKA  L L+M ++ + P ++  NS+I+  C   + ++A+ +  +M+D G+ P++ T+S+
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT----------------- 178
           I+D LCK+  M++A ++LE M++ G RPN+  YN+L+ G+ ++                 
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 179 ------------------GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG 218
                             GR N AK +F SM   G K ++ SYS +++GY    +  +  
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             ++++ ML+KGI P    +N L         +++A  +F++MQ  G+  DT  + T I 
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
            LC+ G + +AL  F  +  +        Y CLI G C  G L  A EL    + + +  
Sbjct: 304 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
             V  ++ +I+ LC +G++ +  D+   M   G  P+ V FN+LM G C+  N
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 416



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 207/470 (44%), Gaps = 79/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  K+   G  P++ TYS +I+GLC++     A  + E+M+          +P+++
Sbjct: 101 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 154

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y ++I G                                   L K G  ++AK +   M
Sbjct: 155 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 214

Query: 87  KDKNINPDVVTYNSVIRGFCYANDS----------------------------------- 111
             K   PD+++Y++++ G+  A DS                                   
Sbjct: 215 VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 274

Query: 112 --NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
             ++A  +F +M ++G+ P+ VTF+ ++  LC+ G++++A      M+ IGV P+  VY 
Sbjct: 275 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 334

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
            L+ G C  G + +AKEL   M +       V  +S +IN  CK   +     +   M+ 
Sbjct: 335 CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ 394

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G +P VVT+N+L  G   +  +E AF L D M   G+  + + Y T +DG CKNG I +
Sbjct: 395 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 454

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL +FR +     +     YS ++ GL ++ R   A ++FH +        + TY +++ 
Sbjct: 455 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 514

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LC +   D+A+ L   + A  V  D + FN ++    +     +  EL 
Sbjct: 515 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 564



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 156/374 (41%), Gaps = 43/374 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G  P+   Y  LI G C  G  + A  L  EM+N +     +  P   
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVK 367

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            +++II+ LCKEG V + K+++  M      P+VVT+NS++ G+C   +  EA  L    
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 427

Query: 118 -------------------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                          F +M+ +GV+P  V +S+I+  L +  + 
Sbjct: 428 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 487

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A ++   MI+ G   +   Y  ++ G C     + A  L   + +M  K ++ +++I+
Sbjct: 488 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 547

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+   K    + A  L+  + + G+ P + TY+ +   L +    E A  LF  +++ G 
Sbjct: 548 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 607

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A+D+      +  L     + +A      +      L+  + S L     + G+ +   E
Sbjct: 608 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR---E 664

Query: 327 LFHSLPRGVLIADV 340
               LP  + +A V
Sbjct: 665 HIKLLPANMTMAVV 678



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P + T+++++D   +  + +    ++  +++ G+ P+ F Y +L+ GF   G V++A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F+ M   G    +   + +I   CK KE++ A S+  +M+  GI P + TY+ +  GL +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +++A ++ ++M   G   ++  Y + I G   +G   E++ +F+ +        + +
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH--ALCADGKMDKAHDLFLD 365
            +  I  L K GR   A  +F S+       D+++Y+ M+H  A   D  +   H++F  
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KG+AP+   FN L+    R     K + +   M  +
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 289


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/383 (35%), Positives = 212/383 (55%), Gaps = 13/383 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +  ++   G  P+ ITY  L+NGLC+ G    A +LF            + KP+ V
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR----------IPKPEIV 354

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           I+ T+I G    G +D AK +L  M     I PDV TYNS+I G+        A  +  +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV ++++++D  CK GK++EA  +L  M   G++PN   +N L+  FC   R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+F  M   GCK +V++++ LI+G C+  EI+ AL L  +M+S+G+    VTYNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRIL 299
           L        +++ A KL +EM   G   D   Y + I GLC+ G + +A  LF + LR  
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +I S + LI+GLC+SG ++ A E    +       D+VT+N +I+ LC  G+++  
Sbjct: 595 HAPSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
             +F  ++A+G+ PD V FNTLM
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLM 676



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 208/400 (52%), Gaps = 11/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   GC PN + Y TLI+ L +      AL L EEM      F + C PDA  
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM------FLMGCVPDAET 289

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I GLCK   +++A +++ +M  +   PD +TY  ++ G C     + AK LF  + 
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 348

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV 181
               +P +V F+ ++     +G++++A  +L  M+   G+ P+   YN+L+ G+   G V
Sbjct: 349 ---PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M + GCK NV+SY+IL++G+CK  +I+ A ++ +EM + G+KP  V +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                + H++  A ++F EM R G   D + + + I GLC+   I  AL L R +     
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI+   + G +K A +L + +       D +TYN +I  LC  G++DKA  
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M   G AP  ++ N L+ G  R+    + VE    M
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 207/401 (51%), Gaps = 13/401 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA +F  + +    P + T+  ++   C       AL+L  +M          C P++VI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG------CVPNSVI 254

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I  L K   V++A +LL +M      PD  T+N VI G C  +  NEA ++   M+
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ +T+  +M+ LCK G+++ A  L   +     +P   ++NTL+ GF   GR++
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLD 370

Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            AK +   M  S G   +V +Y+ LI GY K   +  AL +  +M +KG KP V +Y  L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +EM   G+  +T  +   I   CK   I EA+E+FR +    C
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA-WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + D+ +++ LI GLC+   +K A W L   +  GV +A+ VTYN +I+A    G++ +A 
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINAFLRRGEIKEAR 549

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  +G   D + +N+L+ G  R  E  K   L  +M
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 159/287 (55%), Gaps = 6/287 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  GC+PNV +Y+ L++G C+ G    A N+  EM + +G      KP+ V 
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADG-----LKPNTVG 461

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I   CKE  + +A E+  +M  K   PDV T+NS+I G C  ++   A  L  +M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  N VT++ +++   + G+++EA +L+  M+  G   +   YN+L+ G C  G V+
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A+ LF  M   G   +  S +ILING C++  +E A+    EM+ +G  P +VT+N+L 
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            GL    ++E    +F ++Q  G+  DT  + T +  LCK G++ +A
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 183/402 (45%), Gaps = 48/402 (11%)

Query: 46  INGNGEF-------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD-KNI 91
           +  NGEF             G+V K    ++ +I+    K GF  +   L+L+M++  + 
Sbjct: 121 LGANGEFKTIDRLLIQMKDEGIVFKES--LFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 178

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P   +YN V+      N    A  +F +M+ + + P + TF V+M   C   +++ A  
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           LL  M + G  PN+ +Y TL+       RVN A +L   M  MGC  +  +++ +I G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF------------- 258
           K   I  A  + + ML +G  P  +TY  L  GL +I +V+ A  LF             
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358

Query: 259 -------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
                              D +  +G+  D   Y + I G  K G +  ALE+   +R  
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ ++ SY+ L+DG CK G++  A+ + + +    L  + V +N +I A C + ++ +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++F +M  KG  PD   FN+L+ G    +E    + LL  M
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 140/252 (55%), Gaps = 6/252 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   GC+P+V T+++LI+GLC       AL L  +MI+     GVV   + V
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 530

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+   + G + +A++L+ +M  +    D +TYNS+I+G C A + ++A+ LF +M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+ ++ +++++ LC++G +EEA +  + M+  G  P+   +N+L++G C  GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +F  +++ G   +  +++ L++  CK   +  A  L  E +  G  P   T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 242 FIGLFEIHQVER 253
              +     ++R
Sbjct: 711 LQSIIPQETLDR 722


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  +   G  PN   ++ LIN   R G    A+ +FE+M N     G++  PD V + T
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFAT 386

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A      M D  + P    Y  +I+G C   +  +AK L  EMM++ 
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  V  FS I++ LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  +M S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KPT V Y+ +  G
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A K+F EM   G       Y   + GLC+N    EA  L   L  +  + D
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 686

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +E  G A D    N ++   +   E +K    L  + E N
Sbjct: 687 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 727



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 206/413 (49%), Gaps = 48/413 (11%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           P + TY+ LI+   R     + L +   ++ NG G       PD   Y+ +I G  K+G 
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 149

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VDKA  L L+M ++ + P ++  NS+I+  C   + ++A+ +  +M+D G+ P++ T+S+
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT----------------- 178
           I+D LCK+  M++A ++LE M++ G RPN+  YN+L+ G+ ++                 
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 179 ------------------GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG 218
                             GR N AK +F SM   G K ++ SYS +++GY    +  +  
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             ++++ ML+KGI P    +N L         +++A  +F++MQ  G+  DT  + T I 
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
            LC+ G + +AL  F  +  +        Y CLI G C  G L  A EL    + + +  
Sbjct: 390 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
             V  ++ +I+ LC +G++ +  D+   M   G  P+ V FN+LM G C+  N
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 502



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 206/470 (43%), Gaps = 79/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  K+   G  P++ TYS +I+GLC++     A  + E+M+          +P+++
Sbjct: 187 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 240

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y ++I G                                   L K G  ++AK +   M
Sbjct: 241 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 300

Query: 87  KDKNINPDVVTYNSVIRGFCYANDS----------------------------------- 111
             K   PD+++Y++++ G+  A DS                                   
Sbjct: 301 VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 360

Query: 112 --NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
             ++A  +F +M ++G+ P+ VTF+ ++  LC+ G++++A      M+ IGV P+  VY 
Sbjct: 361 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 420

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY-SILINGYCKNKEIEGALSLYSEMLS 228
            L+ G C  G + +AKEL   M +         Y S +IN  CK   +     +   M+ 
Sbjct: 421 CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ 480

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G +P VVT+N+L  G   +  +E AF L D M   G+  + + Y T +DG CKNG I +
Sbjct: 481 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 540

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL +FR +     +     YS ++ GL ++ R   A ++FH +        + TY +++ 
Sbjct: 541 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 600

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LC +   D+A+ L   + A  V  D + FN ++    +     +  EL 
Sbjct: 601 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 153/366 (41%), Gaps = 43/366 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G  P+   Y  LI G C  G  + A  L  EM+N +     +  P   
Sbjct: 399 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVK 453

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            +++II+ LCKEG V + K+++  M      P+VVT+NS++ G+C   +  EA  L    
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 513

Query: 118 -------------------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                          F +M+ +GV+P  V +S+I+  L +  + 
Sbjct: 514 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 573

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A ++   MI+ G   +   Y  ++ G C     + A  L   + +M  K ++ +++I+
Sbjct: 574 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 633

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+   K    + A  L+  + + G+ P + TY+ +   L +    E A  LF  +++ G 
Sbjct: 634 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A+D+      +  L     + +A      +      L+  + S L     + G +K    
Sbjct: 694 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK---G 750

Query: 327 LFHSLP 332
           LF + P
Sbjct: 751 LFGTAP 756



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P + T+++++D   +  + +    ++  +++ G+ P+ F Y +L+ GF   G V++A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F+ M   G    +   + +I   CK KE++ A S+  +M+  GI P + TY+ +  GL +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +++A ++ ++M   G   ++  Y + I G   +G   E++ +F+ +        + +
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH--ALCADGKMDKAHDLFLD 365
            +  I  L K GR   A  +F S+       D+++Y+ M+H  A   D  +   H++F  
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KG+AP+   FN L+    R     K + +   M  +
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 375



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 18/259 (6%)

Query: 143 NGKMEEASQLLELMIQIGVR-----------------PNAFVYNTLMDGFCLTGRVNRAK 185
            G  E  S LLE  ++I +R                 P    YN L+D +    R +   
Sbjct: 61  QGHHEIVSLLLESEVEINLRNYRGQRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGL 120

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   +   G   + FSYS LI G+ K+ E++ A  L+ EM+ +G+ P ++  N++   L
Sbjct: 121 AIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKEL 179

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++ ++++A  +  +M   G+A D + Y   IDGLCK+  + +A  +   +       + 
Sbjct: 180 CKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNS 239

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI G   SG    +  +F  +    +I  V   N  IHAL   G+ ++A  +F  
Sbjct: 240 ITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDS 299

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M  KG  PD ++++T++ G
Sbjct: 300 MVLKGPKPDIISYSTMLHG 318


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/399 (34%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  PNV TY+ LI G C  G+  + L  F EM   NG     C P+ V 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM-ERNG-----CLPNVVT 240

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIID  CK   + +A +LL  M  K +NP++++YN VI G C      E   +  EM 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   P+ VTF+ +++  C  G   +A  L   M++ G+ PN   Y TL++  C  G +N
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA E    M   G   N  +Y+ LI+G+ +   ++ A  +  EM+  G  PT++TYN L 
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + ++E A  L  EM   G   D  +Y T I G C+N  + +A +L   +      
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YS LI GLCK  RL    +LF  +    L  D VTY  +I+A C +G +DKA  L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG +PD V +N L+ G  + + T +   LL ++
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 203/381 (53%), Gaps = 8/381 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYT 64
            F +++  GC PNV+TY+T+I+  C+      A  L   M + G         P+ + Y 
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG-------LNPNLISYN 277

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I+GLC+EG + +  E+L +M  +   PD VT+N++I G+C   + ++A  L  EM+  
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNVVT++ +++ +CK G +  A + L+ M   G+ PN   Y TL+DGF   G + +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ++   M   G    + +Y+ LING+C    +E A  L  EM+ +G  P VV+Y+T+  G
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                ++E+AF+L  EM   G++ D   Y + I GLCK   + E  +LF+ +  L    D
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI+  C  G L  A  L   + +     D+VTYN++I+      +  +A  L L
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 365 DMEAKGVAPDCVAFNTLMLGC 385
            +  +   P+ + +NTL+  C
Sbjct: 578 KLLYEESVPNEITYNTLIDNC 598



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 202/383 (52%), Gaps = 27/383 (7%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +T++TLING C  G+   AL L  EM+  NG       P+ V YTT+I+ +CK G +
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNL 359

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A E L QM+D+ ++P+  TY ++I GF       +A ++  EM++ G  P ++T++ +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  C  G+ME+AS LL+ MI+ G  P+   Y+T++ GFC    + +A +L V M + G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G CK + +     L+ EMLS G+ P  VTY +L         +++A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE-------------- 302
           L DEM + G + D   Y   I+G  K     EA  L   L++L  E              
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDN 597

Query: 303 ---LDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDK 358
              L+ +S   L+ G C  G +  A  +  S L +G  + + V YN++IH     G ++K
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV-YNVIIHGHSKVGNIEK 656

Query: 359 AHDLFLDMEAKGVAPDCVAFNTL 381
           A++L+ +M   G AP  V    L
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 204/382 (53%), Gaps = 7/382 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDA 60
           +A ++    K++G  P V++Y+ +++ + RT  ++ +A  +F+EM+    E GV   P+ 
Sbjct: 150 KALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV----ESGV--SPNV 203

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I G C  G ++       +M+     P+VVTYN++I  +C      EA +L   
Sbjct: 204 YTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN+++++V+++ LC+ G+M+E S++LE M +    P+   +NTL++G+C  G 
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A  L   M   G   NV +Y+ LIN  CK   +  A+    +M  +G+ P   TY T
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   +++A+++  EM  +G       Y   I+G C  G + +A  L + +    
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ SYS +I G C++  L+ A++L   +    +  DV TY+ +I  LC   ++ +  
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           DLF +M + G+ PD V + +L+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLI 525



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 1/343 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-A 114
           CK  + ++  ++    +   ++KA  ++   K     P V++YN+++        S + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + +F EM++ GV PNV T+++++   C  G +E        M + G  PN   YNT++D 
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C   ++  A +L   M   G   N+ SY+++ING C+  +++    +  EM  +   P 
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VT+NTL  G   +    +A  L  EM ++G++ +   Y T I+ +CK G +  A+E   
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      + R+Y+ LIDG  + G LK A+++   +        ++TYN +I+  C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +M+ A  L  +M  +G  PD V+++T++ G  RN E  K  +L
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 23/308 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   G  P +ITY+ LING C  G    A  L +EMI    E G +  PD V
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI----ERGFI--PDVV 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TII G C+   ++KA +L ++M  K I+PDV TY+S+I+G C      E   LF EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+ VT++ +++  C  G +++A +L + MIQ G  P+   YN L++GF    R 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS----------------E 225
             AK L + +       N  +Y+ LI+  C N E + AL+L                   
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLMNEADRVLES 628

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML KG K     YN +  G  ++  +E+A+ L+ EM   G A  +         L   G 
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688

Query: 286 IVEALELF 293
            VE  +L 
Sbjct: 689 EVELNQLL 696



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 1/272 (0%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR-VNRAKELFVSM 191
           F +++    +   + +A  ++ L    G  P    YN ++D    T + V  A+ +F  M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   NV++Y+ILI G+C    +E  L  + EM   G  P VVTYNT+     ++ ++
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AFKL   M   G+  +  +Y   I+GLC+ G + E  E+   +   +   D  +++ L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+G C  G    A  L   + +  L  +VVTY  +I+++C  G +++A +    M  +G+
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            P+   + TL+ G  +     +  +++  M E
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE-IEGAL 220
           + ++ V++ ++        +N+A  +    +S G    V SY+ +++   + K+ ++ A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++ EM+  G+ P V TYN L  G      +E     F EM+R+G   +   Y T ID  
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   I EA +L R + +     ++ SY+ +I+GLC+ G++K   E+   + +   + D 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VT+N +I+  C  G   +A  L  +M   G++P+ V + TL+    +    ++ +E L +
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 401 MDER 404
           M +R
Sbjct: 369 MRDR 372



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 44/201 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           E   LF ++ + G  P+ +TY++LIN  C  G    AL L +EMI       +V      
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 58  -------------------------PDAVIYTTIID---------------GLCKEGFVD 77
                                    P+ + Y T+ID               G C +G ++
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMN 620

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  +L  M  K    +   YN +I G     +  +A  L+ EM+  G  P+ VT   + 
Sbjct: 621 EADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALA 680

Query: 138 DELCKNGKMEEASQLLELMIQ 158
             L   GK  E +QLL+  ++
Sbjct: 681 KSLYHEGKEVELNQLLDYTLK 701


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  +   G  PN   ++ LIN   R G    A+ +FE+M N     G++  PD V + T
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFAT 462

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A      M D  + P    Y  +I+G C   +  +AK L  EMM++ 
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  V  FS I++ LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  +M S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KPT V Y+ +  G
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A K+F EM   G       Y   + GLC+N    EA  L   L  +  + D
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 762

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +E  G A D    N ++   +   E +K    L  + E N
Sbjct: 763 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 803



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 213/431 (49%), Gaps = 52/431 (12%)

Query: 3   AAALFTKLKAFGCE----PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCK 57
           A  LF ++  + C     P + TY+ LI+   R     + L +   ++ NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   Y+ +I G  K+G VDKA  L L+M ++ + P ++  NS+I+  C   + ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ T+S+I+D LCK+  M++A ++LE M++ G RPN+  YN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 178 T-----------------------------------GRVNRAKELFVSMESMGCKHNVFS 202
           +                                   GR N AK +F SM   G K ++ S
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 203 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           YS +++GY    +  +    ++++ ML+KGI P    +N L         +++A  +F++
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           MQ  G+  DT  + T I  LC+ G + +AL  F  +  +        Y CLI G C  G 
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 321 LKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           L  A EL    + + +    V  ++ +I+ LC +G++ +  D+   M   G  P+ V FN
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 380 TLMLG-CIRNN 389
           +LM G C+  N
Sbjct: 568 SLMEGYCLVGN 578



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 206/470 (43%), Gaps = 79/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  K+   G  P++ TYS +I+GLC++     A  + E+M+          +P+++
Sbjct: 263 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 316

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y ++I G                                   L K G  ++AK +   M
Sbjct: 317 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 376

Query: 87  KDKNINPDVVTYNSVIRGFCYANDS----------------------------------- 111
             K   PD+++Y++++ G+  A DS                                   
Sbjct: 377 VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 436

Query: 112 --NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
             ++A  +F +M ++G+ P+ VTF+ ++  LC+ G++++A      M+ IGV P+  VY 
Sbjct: 437 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 496

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY-SILINGYCKNKEIEGALSLYSEMLS 228
            L+ G C  G + +AKEL   M +         Y S +IN  CK   +     +   M+ 
Sbjct: 497 CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ 556

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G +P VVT+N+L  G   +  +E AF L D M   G+  + + Y T +DG CKNG I +
Sbjct: 557 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 616

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL +FR +     +     YS ++ GL ++ R   A ++FH +        + TY +++ 
Sbjct: 617 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 676

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LC +   D+A+ L   + A  V  D + FN ++    +     +  EL 
Sbjct: 677 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 147/351 (41%), Gaps = 40/351 (11%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  +   G  P+   Y  LI G C  G  + A  L  EM+N +     +  P    +++I
Sbjct: 480 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSI 534

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL--------- 117
           I+ LCKEG V + K+++  M      P+VVT+NS++ G+C   +  EA  L         
Sbjct: 535 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 594

Query: 118 --------------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
                                     F +M+ +GV+P  V +S+I+  L +  +   A +
Sbjct: 595 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 654

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +   MI+ G   +   Y  ++ G C     + A  L   + +M  K ++ +++I+I+   
Sbjct: 655 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 714

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K    + A  L+  + + G+ P + TY+ +   L +    E A  LF  +++ G A+D+ 
Sbjct: 715 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 774

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
                +  L     + +A      +      L+  + S L     + G+ +
Sbjct: 775 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P + T+++++D   +  + +    ++  +++ G+ P+ F Y +L+ GF   G V++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F+ M   G    +   + +I   CK KE++ A S+  +M+  GI P + TY+ +  GL +
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +++A ++ ++M   G   ++  Y + I G   +G   E++ +F+ +        + +
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH--ALCADGKMDKAHDLFLD 365
            +  I  L K GR   A  +F S+       D+++Y+ M+H  A   D  +   H++F  
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KG+AP+   FN L+    R     K + +   M  +
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 451



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   + + G EPN   Y TL++G C+ G    AL +F +M++     GV  KP +V
Sbjct: 581 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK----GV--KPTSV 634

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ I+ GL +      AK++  +M +      + TY  V+ G C  N ++EA  L  ++
Sbjct: 635 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ +++TF++++  + K G+ +EA +L + +   G+ PN   Y+ ++         
Sbjct: 695 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 754

Query: 182 NRAKELFVSMESMG 195
             A  LF+S+E  G
Sbjct: 755 EEADNLFISVEKSG 768



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 8/215 (3%)

Query: 184 AKELFVSMESMGCKHN----VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           A ELF  M+   C  +    + +Y+ILI+ Y +    +  L++   +L  G+ P   +Y 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G  +  +V++A  LF EM   GV        + I  LCK   + +A  + + +   
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ +YS +IDGLCKS  +  A  +   +       + +TYN +IH     G  +++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 360 HDLFLDMEAKGVAP---DCVAFNTLMLGCIRNNET 391
             +F  M + GV P   +C +F   +    R NE 
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 369


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  +   G  PN   ++ LIN   R G    A+ +FE+M N     G++  PD V + T
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFAT 442

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A      M D  + P    Y  +I+G C   +  +AK L  EMM++ 
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  V  FS I++ LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  +M S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KPT V Y+ +  G
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A K+F EM   G       Y   + GLC+N    EA  L   L  +  + D
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 742

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +E  G A D    N ++   +   E +K    L  + E N
Sbjct: 743 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 783



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 213/431 (49%), Gaps = 52/431 (12%)

Query: 3   AAALFTKLKAFGCE----PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCK 57
           A  LF ++  + C     P + TY+ LI+   R     + L +   ++ NG G       
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 188

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   Y+ +I G  K+G VDKA  L L+M ++ + P ++  NS+I+  C   + ++A+ +
Sbjct: 189 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 247

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ T+S+I+D LCK+  M++A ++LE M++ G RPN+  YN+L+ G+ +
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307

Query: 178 T-----------------------------------GRVNRAKELFVSMESMGCKHNVFS 202
           +                                   GR N AK +F SM   G K ++ S
Sbjct: 308 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 367

Query: 203 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           YS +++GY    +  +    ++++ ML+KGI P    +N L         +++A  +F++
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           MQ  G+  DT  + T I  LC+ G + +AL  F  +  +        Y CLI G C  G 
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 321 LKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           L  A EL    + + +    V  ++ +I+ LC +G++ +  D+   M   G  P+ V FN
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 380 TLMLG-CIRNN 389
           +LM G C+  N
Sbjct: 548 SLMEGYCLVGN 558



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 206/470 (43%), Gaps = 79/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  K+   G  P++ TYS +I+GLC++     A  + E+M+          +P+++
Sbjct: 243 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 296

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            Y ++I G                                   L K G  ++AK +   M
Sbjct: 297 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 356

Query: 87  KDKNINPDVVTYNSVIRGFCYANDS----------------------------------- 111
             K   PD+++Y++++ G+  A DS                                   
Sbjct: 357 VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCG 416

Query: 112 --NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
             ++A  +F +M ++G+ P+ VTF+ ++  LC+ G++++A      M+ IGV P+  VY 
Sbjct: 417 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYG 476

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY-SILINGYCKNKEIEGALSLYSEMLS 228
            L+ G C  G + +AKEL   M +         Y S +IN  CK   +     +   M+ 
Sbjct: 477 CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ 536

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G +P VVT+N+L  G   +  +E AF L D M   G+  + + Y T +DG CKNG I +
Sbjct: 537 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDD 596

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL +FR +     +     YS ++ GL ++ R   A ++FH +        + TY +++ 
Sbjct: 597 ALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLG 656

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LC +   D+A+ L   + A  V  D + FN ++    +     +  EL 
Sbjct: 657 GLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 151/361 (41%), Gaps = 43/361 (11%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  +   G  P+   Y  LI G C  G  + A  L  EM+N +     +  P    +++I
Sbjct: 460 FNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSI 514

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL--------- 117
           I+ LCKEG V + K+++  M      P+VVT+NS++ G+C   +  EA  L         
Sbjct: 515 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 574

Query: 118 --------------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
                                     F +M+ +GV+P  V +S+I+  L +  +   A +
Sbjct: 575 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 634

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +   MI+ G   +   Y  ++ G C     + A  L   + +M  K ++ +++I+I+   
Sbjct: 635 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 694

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K    + A  L+  + + G+ P + TY+ +   L +    E A  LF  +++ G A+D+ 
Sbjct: 695 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 754

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
                +  L     + +A      +      L+  + S L     + G +K    LF + 
Sbjct: 755 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK---GLFGTA 811

Query: 332 P 332
           P
Sbjct: 812 P 812



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 136/279 (48%), Gaps = 3/279 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P + T+++++D   +  + +    ++  +++ G+ P+ F Y +L+ GF   G V++A  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F+ M   G    +   + +I   CK KE++ A S+  +M+  GI P + TY+ +  GL +
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              +++A ++ ++M   G   ++  Y + I G   +G   E++ +F+ +        + +
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH--ALCADGKMDKAHDLFLD 365
            +  I  L K GR   A  +F S+       D+++Y+ M+H  A   D  +   H++F  
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KG+AP+   FN L+    R     K + +   M  +
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 431



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   + + G EPN   Y TL++G C+ G    AL +F +M++     GV  KP +V
Sbjct: 561 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK----GV--KPTSV 614

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ I+ GL +      AK++  +M +      + TY  V+ G C  N ++EA  L  ++
Sbjct: 615 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ +++TF++++  + K G+ +EA +L + +   G+ PN   Y+ ++         
Sbjct: 675 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 734

Query: 182 NRAKELFVSMESMG 195
             A  LF+S+E  G
Sbjct: 735 EEADNLFISVEKSG 748



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 8/215 (3%)

Query: 184 AKELFVSMESMGCKHN----VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           A ELF  M+   C  +    + +Y+ILI+ Y +    +  L++   +L  G+ P   +Y 
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 194

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G  +  +V++A  LF EM   GV        + I  LCK   + +A  + + +   
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ +YS +IDGLCKS  +  A  +   +       + +TYN +IH     G  +++
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 360 HDLFLDMEAKGVAP---DCVAFNTLMLGCIRNNET 391
             +F  M + GV P   +C +F   +    R NE 
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 349


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 212/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+F  +   GC P+V+TYS L++  C+      A+ L +EM    G     C+PD V
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM-RAKG-----CEPDIV 233

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ +C EG VD+A  +L  +      PD VTY  V++  C +    E + LF EM
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+ VTF+ I+  LC+ G ++ A ++++ M + G  P+   Y++++DG C  GRV
Sbjct: 294 ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRV 353

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++S GCK +  +Y+ ++ G C  ++ E A  L +EM+     P  VT+NT+
Sbjct: 354 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V+RA K+ ++M  +G   D   Y + IDGLC    I +A+EL   L+   C
Sbjct: 414 IASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +++ L+ GLC   R + A +L  ++       D  T+N +I +LC  G + +A +
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               M   G  P+   +N ++   ++  +T + ++LL  M
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM 573



 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 220/431 (51%), Gaps = 31/431 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  L  +++A GCEP+++TY+ LIN +C  G    ALN+  ++ +   +   V      
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PD V + TI+  LC++G VD+A +++  M +    
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+VTY+S++ G C     ++A  L   +   G +P+ + ++ ++  LC   + E A +L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+     P+   +NT++   C  G V+RA ++   M   GC  ++ +Y+ +I+G C 
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + I+ A+ L S + S G KP +VT+NTL  GL  + + E A +L   M       D   
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + T I  LC+ G +++A+E  + +    C  +  +Y+ ++D L K+G+ + A +L   + 
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
            G    D++TYN +I  +   GKM++A DL   M + G++PD + + +L  G  R + T 
Sbjct: 575 NGT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632

Query: 393 KVVELLHRMDE 403
           + + +L R+ +
Sbjct: 633 RAIRMLCRLQD 643



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 8/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L ++LK++GC+P+ I Y+T++ GLC       A  L  EM+  +      C PD V
Sbjct: 355 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD------CPPDEV 408

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC++G VD+A +++ QM +   NPD+VTYNS+I G C     ++A  L   +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VTF+ ++  LC   + E+A QL+  M+     P+A  +NT++   C  G +
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E    M   GC  N  +Y+I+++   K  + + AL L S M +    P ++TYNT+
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTV 586

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              + +  ++E A  L   M  +G++ DT  YR+   G+C+      A+ +   L+ +  
Sbjct: 587 ISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGL 646

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+ ++ G C++ R  IA + F  +     + D  TY I++ AL  +  +D+A  
Sbjct: 647 SPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQ 706

Query: 362 LFLDMEAKGV 371
           L +++ + GV
Sbjct: 707 LLVNLCSLGV 716



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 186/372 (50%), Gaps = 9/372 (2%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G    V+TY+T++NG CR G    A  L           G+   PD   +  +I  LC 
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLIS---------GMPFPPDTFTFNPLIRALCV 174

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G V  A  +   M  +  +P VVTY+ ++   C A+   +A  L  EM  +G +P++VT
Sbjct: 175 RGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVT 234

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++V+++ +C  G ++EA  +L  +   G +P+A  Y  ++   C + R    +ELF  M 
Sbjct: 235 YNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA 294

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S  C  +  +++ ++   C+   ++ A+ +   M   G  P +VTY+++  GL ++ +V+
Sbjct: 295 SNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVD 354

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L   ++ +G   DT AY T + GLC       A EL   +    C  D  +++ +I
Sbjct: 355 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVI 414

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             LC+ G +  A ++   +       D+VTYN +I  LC +  +D A +L  ++++ G  
Sbjct: 415 ASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCK 474

Query: 373 PDCVAFNTLMLG 384
           PD V FNTL+ G
Sbjct: 475 PDIVTFNTLLKG 486



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 39/406 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF ++ +  C P+ +T++T++  LC+ G    A+ + + M     E G  C PD V
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM----SEHG--CIPDIV 338

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++I+DGLC  G VD A ELL ++K     PD + Y +V++G C       A+ L  EM
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEM 398

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P+ VTF+ ++  LC+ G ++ A +++E M + G  P+   YN+++DG C    +
Sbjct: 399 VCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCI 458

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL  +++S GCK ++ +++ L+ G C     E A  L   M+     P   T+NT+
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV 518

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV---------------------------------AA 268
              L +   + +A +    M  +G                                    
Sbjct: 519 ITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTP 578

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y T I  + K G + EAL+L R +       D  +Y  L  G+C+      A  + 
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             L    L  D   YN ++   C + + D A D F  M + G  PD
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPD 684



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 6/272 (2%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV  ++++  LC  G++ +A ++      +G       YNT+++G+C  GR+  A+ L  
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFA---TLGASATVVTYNTMVNGYCRAGRIEDARRL-- 152

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            +  M    + F+++ LI   C    +  AL+++ +ML +G  P+VVTY+ L     +  
Sbjct: 153 -ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
              +A  L DEM+  G   D   Y   I+ +C  G + EAL +   L    C+ D  +Y+
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            ++  LC S R K   ELF  +       D VT+N ++ +LC  G +D+A  +   M   
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G  PD V +++++ G          VELL R+
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ITY+T+I+ + + G    AL+L   M++ NG       PD + Y ++  G+C+E   
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVS-NG-----LSPDTITYRSLAYGICREDGT 631

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  +L +++D  ++PD   YN ++ GFC    ++ A   F  M+  G  P+  T+ ++
Sbjct: 632 DRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIIL 691

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           ++ L     ++EA QLL  +  +GV   + +
Sbjct: 692 LEALAYECLLDEAKQLLVNLCSLGVLDKSLI 722


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 215/397 (54%), Gaps = 7/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++   ++  GC+PN +TY+TL+   CR G    A  L + M  G        KP+ V
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG------LKPNLV 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++G+CK G ++ A+++  +M  + + PD V+YN+++ G+C    S+EA  +F EM
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++  +CK G +E A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M     + +V  Y+ LINGYC    ++ A  L  EM +KG+KP VVTY+T+
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +      AF+L  +M  +GV  D   Y + I  LC+   + +A  LF+ +  L  
Sbjct: 409 LSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A  
Sbjct: 469 QPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   P  + ++ LM  C RN E   V+ LL
Sbjct: 529 LLFKLYHEEPVPANIKYDALMR-CCRNAELKSVLALL 564



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 208/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F  + + G  PNV TY+ L+  LC  GH   AL++  +M       G  C P+AV
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDM------RGAGCDPNAV 193

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++   C+ G VD+A+ L+  M++  + P++VT+NSV+ G C A    +A+++F EM
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ V+++ ++   CK G   EA  +   M + G+ P+   + +L+   C  G +
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  L   M   G + N  +++ LI+G+CK   ++ AL    EM    I+P+VV YN L
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A +L  EM+  GV  D   Y T +   CKNG    A +L + +     
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS LI  LC+  RL  A  LF ++    L  D VTY  +I   C +G +++A  
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M   GV PD V ++ L+ G  ++  T +   LL ++
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 218/450 (48%), Gaps = 59/450 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L   ++  G +PN++T+++++NG+C+ G    A  +F+EM+           PD V
Sbjct: 210 RAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG------LAPDGV 263

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G CK G   +A  +  +M  K I PDVVT+ S+I   C A +   A  L  EM
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+Q N +TF+ ++D  CK G +++A   +  M Q  ++P+   YN L++G+C+ GR+
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+EL   ME+ G K +V +YS +++ YCKN +   A  L  +ML  G+ P  +TY++L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L E  ++  A  LF  M   G+  D   Y + IDG CK G +  AL L   +     
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA----WELFHSLP-------------------RGVLI- 337
             D+ +YS LI+GL KS R K A    ++L+H  P                   + VL  
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 338 ------------ADVV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
                       AD V               Y+++IH  C +G + KA      M   G 
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGF 623

Query: 372 APDCVAFNTLMLGCIRNN---ETSKVVELL 398
           AP+  +  +L+ G        E  +V++ L
Sbjct: 624 APNSTSTISLIRGLFEKGMVVEADQVIQQL 653



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 171/311 (54%), Gaps = 1/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V+ YN+V+     A+  + A+R F  M+  GV PNV T+++++  LC  G  +EA  +
Sbjct: 121 PSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  PNA  YNTL+  FC  G V+RA+ L   M   G K N+ +++ ++NG CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  ++ EM+ +G+ P  V+YNTL  G  ++     A  +F EM R G+  D   
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + + I  +CK G +  A+ L R +R    +++  +++ LIDG CK G L  A      + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +   VV YN +I+  C  G+MD+A +L  +MEAKGV PD V ++T++    +N +T 
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 393 KVVELLHRMDE 403
              +L  +M E
Sbjct: 420 SAFQLNQQMLE 430



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 201/388 (51%), Gaps = 7/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+ Y+ ++  L        A   F+ M++     GV   P+   Y  ++  LC  
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSD----GVA--PNVYTYNILVRALCGR 170

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  +L  M+    +P+ VTYN+++  FC A + + A+RL   M + G++PN+VTF
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++ +CK G+ME+A ++ + M++ G+ P+   YNTL+ G+C  G  + A  +F  M  
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V +++ LI+  CK   +E A+ L  EM  +G++   +T+  L  G  +   ++ 
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A     EM++  +      Y   I+G C  G + EA EL R +     + D+ +YS ++ 
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+G    A++L   +    ++ D +TY+ +I  LC + ++  AH LF +M + G+ P
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V + +L+ G  +     + + L   M
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEM 498



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 56/386 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  +++  G + N IT++ LI+G C+ G    AL    EM     +  VVC     
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC----- 369

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C  G +D+A+EL+ +M+ K + PDVVTY++++  +C   D++ A +L  +M
Sbjct: 370 -YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ GV P+ +T+S ++  LC+  ++ +A  L + MI +G++P+   Y +L+DG C  G V
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
            RA  L   M   G   +V +YS+LING                                
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              C+N E++  L+L                Y  +L +        Y+ L  G      V
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            +A     +M + G A ++ +  + I GL + G +VEA ++ + L       D  +   L
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKAL 668

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLI 337
           ID   K G +    ++ H + R  L+
Sbjct: 669 IDLNLKEGNVDAVLDVLHGMARDGLL 694



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 44/207 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF-----EEMINGNGEF---- 52
            A +L  ++   G  P+V+TYS LINGL ++  T  A  L      EE +  N ++    
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549

Query: 53  ---------------------GVVCKPDAV--------------IYTTIIDGLCKEGFVD 77
                                G++ + D V              +Y+ +I G C+EG V 
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA     QM      P+  +  S+IRG        EA ++  ++++     +      ++
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALI 669

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPN 164
           D   K G ++    +L  M + G+ P+
Sbjct: 670 DLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  +   G  PN   ++ LIN   R G    A+ +FE+M N     G++  PD V + T
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFAT 463

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A      M D  + P    Y  +I+G C   +  +AK L  EMM++ 
Sbjct: 464 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 523

Query: 126 VQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + P  V  FS I++ LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A
Sbjct: 524 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 583

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  +M S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KPT V Y+ +  G
Sbjct: 584 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 643

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           LF+  +   A K+F EM   G       Y   + GLC+N    EA  L   L  +  + D
Sbjct: 644 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 703

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +++ +I  + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+
Sbjct: 704 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 763

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +E  G A D    N ++   +   E +K    L  + E N
Sbjct: 764 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENN 804



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 211/432 (48%), Gaps = 53/432 (12%)

Query: 3   AAALFTKLKAFGCE----PNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCK 57
           A  LF ++  + C     P + TY+ LI+   R     + L +   ++ NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   Y+ +I G  K+G VDKA  L L+M ++ + P ++  NS+I+  C   + ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ T+S+I+D LCK+  M++A ++LE M++ G RPN+  YN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G  N +  +F  M S G    V + +  I+   K+     A  ++  M+ KG KP +++
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 238 YNT---------------LFIGLFEI-----------------------HQVERAFKLFD 259
           Y+T               ++  +F +                         +++A  +F+
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +MQ  G+  DT  + T I  LC+ G + +AL  F  +  +        Y CLI G C  G
Sbjct: 448 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 507

Query: 320 RLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            L  A EL    + + +    V  ++ +I+ LC +G++ +  D+   M   G  P+ V F
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 567

Query: 379 NTLMLG-CIRNN 389
           N+LM G C+  N
Sbjct: 568 NSLMEGYCLVGN 579



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 195/406 (48%), Gaps = 10/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  K+   G  P++ TYS +I+GLC++     A  + E+M+          +P+++
Sbjct: 263 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G    G  +++  +  QM    + P V   NS I        +NEAK +F  M
Sbjct: 317 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 376

Query: 122 MDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           + +G +P+++++S     +C             +  LM+  G+ PN  V+N L++ +   
Sbjct: 377 VLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARC 436

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +++A  +F  M++ G   +  +++ +I+  C+   ++ AL  ++ M+  G+ P+   Y
Sbjct: 437 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 496

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY-RTFIDGLCKNGYIVEALELFRTLR 297
             L  G     ++ +A +L  EM    +      Y  + I+ LCK G + E  ++   + 
Sbjct: 497 GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 556

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++ +++ L++G C  G ++ A+ L  ++    +  +   Y  ++   C +G++D
Sbjct: 557 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 616

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +F DM  KGV P  V ++ ++ G  +   T+   ++ H M E
Sbjct: 617 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 662



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 40/304 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G  P+   Y  LI G C  G  + A  L  EM+N +     +  P   
Sbjct: 476 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVK 530

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            +++II+ LCKEG V + K+++  M      P+VVT+NS++ G+C   +  EA  L    
Sbjct: 531 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM 590

Query: 118 -------------------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                          F +M+ +GV+P  V +S+I+  L +  + 
Sbjct: 591 ASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRT 650

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A ++   MI+ G   +   Y  ++ G C     + A  L   + +M  K ++ +++I+
Sbjct: 651 TAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 710

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+   K    + A  L+  + + G+ P + TY+ +   L +    E A  LF  +++ G 
Sbjct: 711 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 770

Query: 267 AADT 270
           A+D+
Sbjct: 771 ASDS 774



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 142/312 (45%), Gaps = 33/312 (10%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + TYN +I  +   +  +    +   ++  G+ P+  ++S+I     K+G++++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCL 232

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++ GV P   + N+++   C    +++A+ +   M   G   ++F+YS++I+G CK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K ++ A  +  +M+  G +P  +TYN+L  G         + ++F +M   GV      
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
             +FI  L K+G   EA  +F ++ +   + DI SYS     +C    + + W ++H++ 
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY-WYVTVVWVMWHNI- 410

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                     +N+M+                     KG+AP+   FN L+    R     
Sbjct: 411 ----------FNLML--------------------TKGIAPNKHVFNILINAYARCGMMD 440

Query: 393 KVVELLHRMDER 404
           K + +   M  +
Sbjct: 441 KAMLIFEDMQNK 452



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 8/215 (3%)

Query: 184 AKELFVSMESMGCKHN----VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           A ELF  M+   C  +    + +Y+ILI+ Y +    +  L++   +L  G+ P   +Y 
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY- 214

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G  +  +V++A  LF EM   GV        + I  LCK   + +A  + + +   
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ +YS +IDGLCKS  +  A  +   +       + +TYN +IH     G  +++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 360 HDLFLDMEAKGVAP---DCVAFNTLMLGCIRNNET 391
             +F  M + GV P   +C +F   +    R NE 
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 369


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 7/386 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K++  G  PNV+TY+TLI+  C+      A+ L   M  G    GV    + + Y ++I+
Sbjct: 232 KMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG----GVAA--NLISYNSVIN 285

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLC +G + +  EL+ +M+ K + PD VTYN+++ GFC   + ++   L  EM+ +G+ P
Sbjct: 286 GLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSP 345

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++ +++ +CK G +  A ++ + M   G+RPN   Y TL+DGFC  G +N A ++ 
Sbjct: 346 NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   +V +Y+ L++GYC    ++ A+ +   M+ +G+ P VV+Y+T+  G    
Sbjct: 406 SEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE 465

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++ +AF++ +EM   GV  DT  Y + I GLC    +VEA +LFR +       D  +Y
Sbjct: 466 RELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI+  C  G L  A  L   + +   + D VTY+++I+ L    +   A  L L +  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKV 394
           +   PD V +NTL+  C  NNE   V
Sbjct: 586 EESVPDDVTYNTLIENC-SNNEFKSV 610



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 214/448 (47%), Gaps = 59/448 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   +   G   N+I+Y+++INGLC  G       L EEM  G G       PD V
Sbjct: 260 EAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM-RGKG-----LVPDEV 313

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++G CKEG + +   LL +M  K ++P+VVTY ++I   C A + + A  +F +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  T++ ++D  C+ G M EA ++L  MI  G  P+   YN L+ G+C  GRV
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G   +V SYS +I G+C+ +E+  A  +  EM+ KG+ P  VTY++L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++  AF LF EM R G+  D   Y + I+  C +G + +AL L   +     
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN----------------- 344
             D  +YS LI+GL K  R K+A  L   L     + D VTYN                 
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 345 ---------------------------------IMIHALCADGKMDKAHDLFLDMEAKGV 371
                                            +MIH     G + KA++L++++E    
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673

Query: 372 APDCVAFNTLMLGCIR---NNETSKVVE 396
           A   VA   L+    R   N+E S++++
Sbjct: 674 ACHTVAVIALVKALAREGMNDELSRLLQ 701



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  PNV TY+ +I G+   G     L    +M     + G+   P+ V
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM----EKEGI--SPNVV 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID  CK+  V +A  LL  M    +  ++++YNSVI G C     +E   L  EM
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+ VT++ +++  CK G + +   LL  M+  G+ PN   Y TL++  C  G +
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA E+F  M   G + N  +Y+ LI+G+C+   +  A  + SEM+  G  P+VVTYN L
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +V+ A  +   M   G+  D  +Y T I G C+   + +A ++   +     
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS LI GLC   +L  A++LF  + R  L  D VTY  +I+A C DG++ KA  
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M  +G  PD V ++ L+ G  +   T     LL ++
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 201/396 (50%), Gaps = 11/396 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIV-----ALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           G  P V++Y+ +++ L R   +       A  +F +M+  NG       P+   Y  II 
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVR-NG-----VSPNVYTYNVIIR 215

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G+  +G ++K    + +M+ + I+P+VVTYN++I   C      EA  L   M   GV  
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N+++++ +++ LC  G+M E  +L+E M   G+ P+   YNTL++GFC  G +++   L 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   NV +Y+ LIN  CK   +  A+ ++ +M  +G++P   TY TL  G  + 
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             +  A+K+  EM   G +     Y   + G C  G + EA+ + R +       D+ SY
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S +I G C+   L  A+++   +    ++ D VTY+ +I  LC   K+ +A DLF +M  
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G+ PD V + +L+     + E SK + L   M +R
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 193/388 (49%), Gaps = 11/388 (2%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF-----V 76
           +  ++  L R G    AL L   + N +G       P  + Y  ++D L +         
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHG-----FAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A+ +   M    ++P+V TYN +IRG     D  +      +M  +G+ PNVVT++ +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK  K++EA  LL  M   GV  N   YN++++G C  GR++   EL   M   G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +  +Y+ L+NG+CK   +   L L SEM+ KG+ P VVTY TL   + +   + RA +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +FD+M+  G+  +   Y T IDG C+ G + EA ++   + +      + +Y+ L+ G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             GR++ A  +   +    L  DVV+Y+ +I   C + ++ KA  +  +M  KGV PD V
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +++L+ G     +  +  +L   M  R
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRR 516



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 194/392 (49%), Gaps = 17/392 (4%)

Query: 29  LCRTGHTIVALNLFEEMINGNGE---------FGVVCKP--DAVIYTTIIDGLCKEGFVD 77
           L RT H++ A +L   + +  G          F +   P   + ++  ++  L + GFV 
Sbjct: 91  LYRTAHSLAA-DLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVP 149

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN-----EAKRLFIEMMDQGVQPNVVT 132
           KA  LL         P V++YN+V+      + SN     +A+R+F +M+  GV PNV T
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++VI+  +   G +E+    +  M + G+ PN   YNTL+D  C   +V  A  L  +M 
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   N+ SY+ +ING C    +     L  EM  KG+ P  VTYNTL  G  +   + 
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           +   L  EM   G++ +   Y T I+ +CK G +  A+E+F  +R+     + R+Y+ LI
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG C+ G +  A+++   +        VVTYN ++H  C  G++ +A  +   M  +G+ 
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           PD V+++T++ G  R  E  K  ++   M E+
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEK 481



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 203/424 (47%), Gaps = 58/424 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +   L +++   G  PNV+TY+TLIN +C+ G+   A+ +F++M + G        +P+ 
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG-------LRPNE 382

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTT+IDG C++G +++A ++L +M     +P VVTYN+++ G+C+     EA  +   
Sbjct: 383 RTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRG 442

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+VV++S ++   C+  ++ +A Q+ E M++ GV P+   Y++L+ G CL  +
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK 502

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +LF  M   G   +  +Y+ LIN YC + E+  AL L+ EM+ +G  P  VTY+ 
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGY 285
           L  GL +  + + A +L  ++       D   Y T I+               G C  G 
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGL 622

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  +F+T+     + +   Y+ +I G  + G +  A+ L+  L         V    
Sbjct: 623 MNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIA 682

Query: 346 MIHALC-----------------------------------ADGKMDKAHDLFLDMEAKG 370
           ++ AL                                     +G MD   ++  +M   G
Sbjct: 683 LVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDG 742

Query: 371 VAPD 374
           + PD
Sbjct: 743 LLPD 746



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 21/167 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G  P+ +TY++LIN  C  G    AL L +EM+    + G +  PD 
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV----QRGFL--PDN 557

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI---------------RGF 105
           V Y+ +I+GL K+     AK LLL++  +   PD VTYN++I               +GF
Sbjct: 558 VTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGF 617

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           C     NEA R+F  M+ +  +PN   +++++    + G + +A  L
Sbjct: 618 CMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/406 (33%), Positives = 209/406 (51%), Gaps = 8/406 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K     P+ ++Y+T+INGLC+    + A  LF+EM  G       CKP++V
Sbjct: 147 KAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGE------CKPNSV 200

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +IDG CK G V++   LL +M+   +  DV  Y+++I GFC   D    K LF EM
Sbjct: 201 TFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEM 260

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNVVT+S +M+ LCK  K +EA+Q+L+ M    VRP+   Y  L DG    GR 
Sbjct: 261 LRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRA 320

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M   G + N  +Y+ +ING CK   ++ AL +   M  KG KP VVTY+TL
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL 380

Query: 242 FIGLFEIHQVERAFKLFDEM--QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             GL  + +++ A  L + +  +   +  D +A+   I  LCK   +  A  ++ T+   
Sbjct: 381 VKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER 440

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +I +Y+ LIDG   +G+L  A EL+       +  +  TY ++I+ LC    +  A
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIA 500

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             LF    A G  P    +NTLM    R +   +   L   M   N
Sbjct: 501 KGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 211/389 (54%), Gaps = 8/389 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++K   C+PN +T+S LI+G C+ G       L EEM     + G+  + D 
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM----EKMGL--EGDV 234

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y+ +I G C +G +++ KEL  +M  KN+ P+VVTY+ ++   C      EA ++   
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V+P+VV ++V+ D L KNG+  +A ++L+LM++ G  PN   YN +++G C  GR
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPTVVTY 238
           V+ A  +  +M   G K +V +YS L+ G C   +I+ A+ L + ++SK   IKP V  +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +   L +  ++  A +++  M   G  ++   Y   IDG    G + +ALEL++    
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                +  +Y+ LI+GLCK   L IA  LF+          V  YN ++ +LC +  +++
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           A +LF +M      PD V+FN ++ G ++
Sbjct: 535 ARNLFQEMRNANHDPDVVSFNIIIDGTLK 563



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 214/402 (53%), Gaps = 8/402 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++      PNV+TYS L+N LC+      A  + + M       G   +PD V YT 
Sbjct: 256 LFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT------GCKVRPDVVAYTV 309

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           + DGL K G    A ++L  M  +   P+ VTYN++I G C     ++A  +   M  +G
Sbjct: 310 LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +P+VVT+S ++  LC  GK++EA  LL L++  +  ++P+ F +N ++   C   R+  
Sbjct: 370 KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK ++ +M   G   N+ +Y+ILI+GY    ++  AL L+ + +  GI P   TY  L  
Sbjct: 430 AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL ++  +  A  LF++ +  G       Y T +  LC+   + +A  LF+ +R    + 
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ S++ +IDG  K+G ++ A EL   +    L+ D +T++I+I+     G++D+A  L+
Sbjct: 550 DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M + G  PD V F++L+ G     +T KVV +L +M +++
Sbjct: 610 ERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKD 651



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 176/343 (51%), Gaps = 14/343 (4%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++ G C+ G   KA +L   MK   + PD V+YN+VI G C      EAK LF EM 
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
               +PN VTFS ++D  CKNG +EE   LLE M ++G+  + FVY+ L+ GFC  G + 
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R KELF  M       NV +YS L+N  CK ++ + A  +   M    ++P VV Y  L 
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +   A K+ D M + G   +   Y   I+GLCK G + +AL +  T+     +
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWEL--------FHSLPRGVLIADVVTYNIMIHALCADG 354
            D+ +YS L+ GLC  G++  A +L        FH  P      DV  +N++I  LC   
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP------DVFAFNLVIQELCKQR 425

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           ++  A  ++  M  +G   + V +N L+ G +   + +K +EL
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 196/389 (50%), Gaps = 9/389 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +   +      P+V+ Y+ L +GL + G    A+ + + M+   GE     +P+ V
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK-RGE-----EPNNV 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+GLCKEG VD A  +L  M  K   PDVVTY+++++G C     +EA  L   +
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 122 MDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M +   ++P+V  F++++ ELCK  ++  A ++   M++ G   N   YN L+DG+   G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ +A EL+      G   N  +Y++LING CK + +  A  L+++  + G +PTV  YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL   L     VE+A  LF EM+      D  ++   IDG  K G +  A EL   +  +
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  ++S LI+   K G+L  A  L+  +     + D V ++ ++      GK +K 
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +   M  K V  D    +T+ L C+ N
Sbjct: 641 VSMLQQMADKDVVLDSKLTSTI-LACLCN 668



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 170/335 (50%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+ID L K    D    +  +M   ++ P   + +++I  F      + A  +   +M +
Sbjct: 64  TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   NV  F++++   C++G   +A  L  +M +  + P+   YNT+++G C   R+  A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           KELF  M+   CK N  ++S LI+G+CKN ++E    L  EM   G++  V  Y+ L  G
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                 +ER  +LF+EM R  V  +   Y   ++ LCK     EA ++  T+   K   D
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L DGL K+GR   A ++   + +     + VTYN +I+ LC +G++D A  +  
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            M  KG  PD V ++TL+ G     +  + V+LL+
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN 398



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC------ 56
           A  LF K +A G  P V  Y+TL+  LCR      A NLF+EM N N +  VV       
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559

Query: 57  -----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                   PD + ++ +I+   K G +D+A  L  +M      P
Sbjct: 560 GTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVP 619

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D V ++S+++G+     + +   +  +M D+ V  +    S I+  LC   K  +  ++L
Sbjct: 620 DAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679

Query: 154 ELMIQ 158
               Q
Sbjct: 680 PKFSQ 684


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 209/396 (52%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PNV+T++TLI  LCR G       +  +M++        C PD  +Y T
Sbjct: 247 LMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG------CTPDIRMYAT 300

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++DG+CKEG ++ A E+L +M    + P+VV YN+V++G C A    +A+ L  EM D  
Sbjct: 301 VLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND 360

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              + VTF++++D  C+NG +    +LLE M++ G  P+   Y T+++GFC  G ++ A 
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L  SM + GC+ N  SY+I++ G C  +    A  L S+M+ +G  P  VT+NT+   L
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL 480

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   VE+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +       + 
Sbjct: 481 CKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 540

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             YS +   L K GR+    ++F ++    + +D V YN +I +LC  G  D+A +    
Sbjct: 541 IIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAY 600

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M + G  P+   +  L+ G        +  E+L  +
Sbjct: 601 MVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 203/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  L   L  +FGC+P+V++Y+ ++ GLC         +L EEM+       V C P+ 
Sbjct: 207 EALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVR------VGCPPNV 260

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V + T+I  LC+ G  ++  ++L QM D    PD+  Y +V+ G C       A  +   
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++PNVV ++ ++  LC   + E+A +LL  M       +   +N L+D FC  G 
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V R  EL   M   GC  +V +Y+ +ING+CK   I+ A+ L   M + G +P  ++Y  
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL    +   A  L  +M   G + +   + T I+ LCK G + +A+EL + + +  
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D+ SYS +IDGL K+G+   A EL + +    +  + + Y+ +  AL  +G++++  
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVI 560

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +F +++   +  D V +N ++    +   T + +E L  M
Sbjct: 561 QMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYM 601



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+++G+C+ GH  VA  + + M +    +G+  KP+ V Y T
Sbjct: 282 VLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS----YGL--KPNVVCYNT 335

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC     ++A+ELL +M D +   D VT+N ++  FC          L  +M++ G
Sbjct: 336 VLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G RPN   Y  ++ G C   R   A+
Sbjct: 396 CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAE 455

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  N  +++ +IN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 456 DLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGL 515

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + + A +L + M   G++ +T  Y +    L K G I   +++F  ++ +    D 
Sbjct: 516 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA 575

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK G    A E    +     + +  TY I+I  L ++G + +A ++  +
Sbjct: 576 VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTE 635

Query: 366 MEAKG 370
           + +KG
Sbjct: 636 LCSKG 640



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 184/420 (43%), Gaps = 49/420 (11%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+ +++G CR G    A  L            V   P+A  Y  ++  LC  G +  A  
Sbjct: 86  YNAMVSGYCRAGQLASARRLAAS---------VPVPPNAYTYFPVVRALCARGRIADALS 136

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDS---NEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           +L +M+ +   P    Y+ ++   C          A R+  ++  +G   +V   +++++
Sbjct: 137 VLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLN 196

Query: 139 ELC-KNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
            +C + G ++EA +LL +L    G  P+   YN ++ G C+  R  R ++L   M  +GC
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 197 KHNVFSYSILI-----------------------------------NGYCKNKEIEGALS 221
             NV +++ LI                                   +G CK   +E A  
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +   M S G+KP VV YNT+  GL    + E+A +L  EM  +    D   +   +D  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +NG +   +EL   +    C  D+ +Y+ +I+G CK G +  A  L  S+       + +
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +Y I++  LC+  +   A DL   M  +G +P+ V FNT++    +     + +ELL +M
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQM 496



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++T+IN LC+ G    A+ L ++M+ NG       C PD
Sbjct: 452 VDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG-------CSPD 504

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  D+A ELL  M +K ++P+ + Y+S+          N   ++F 
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK G  + A + L  M+  G  PN   Y  L+ G    G
Sbjct: 565 NIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEG 624

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 625 FVKEAQEMLTELCSKGALRKHFMKHFGIV 653


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 203/359 (56%), Gaps = 9/359 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA    + +   G +P+  TY++LI G C+      A  +F+EM + G       C+ + 
Sbjct: 236 EANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG-------CRRNE 288

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I GLC E  +D+A +L ++MKD +  P V TY  +I+  C +   +EA  L  E
Sbjct: 289 VAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++PN+ T++V++D LC   K+E+A +LL  M++ G+ PN   YN L++G+C  G 
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   MES   + N  +Y+ LI GYCK + +  A+ + ++ML + + P VVTYN+
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G       + A++L   M   G+  D W Y + ID LCK+  + EA +LF +L    
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              ++  Y+ LIDG CK+G++  A  +   +     + + +T+N +IH LC DGK+ +A
Sbjct: 528 VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 200/401 (49%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   GC  N + Y+ LI+GLC       A++LF +M + +      C P    
Sbjct: 272 AFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD------CYPTVRT 325

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I  LC      +A  L+ +M++K I P++ TY  +I   C      +A+ L  +M+
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ PNV+T++ +++  CK G +E+A  ++ELM    +RPN   YN L+ G+C    V+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVH 444

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  +   M       +V +Y+ LI+G C++   + A  L S M  +G+ P   TY ++ 
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +VE A  LFD +++  V  +   Y   IDG CK G + EA  +   +    C 
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI GLC  G+LK A  L   + +  L   V T  I+IH L  DG  D A+  
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M + G  PD   + T +    R        +++ +M E
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 201/402 (50%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+K   C P V TY+ LI  LC +     ALNL +EM     E G+  KP+  
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM----EEKGI--KPNIH 359

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +ID LC +  ++KA+ELL QM +K + P+V+TYN++I G+C      +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++PN  T++ ++   CK   + +A  +L  M++  V P+   YN+L+DG C +G  
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   + ++Y+ +I+  CK+K +E A  L+  +  K + P VV Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V  A  + ++M       ++  +   I GLC +G + EA  L   +  +  
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + + + LI  L K G    A+  F  +       D  TY   I   C +G++  A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M+  GV+PD   +++L+ G      T+    +L RM +
Sbjct: 659 MVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 7/384 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+TL+N L R G       ++ EM+        VC P+   Y  +++G CK G V++A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDK-----VC-PNIYTYNKMVNGYCKVGNVEEANQ 239

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            +  + +  ++PD  TY S+I G+C   D + A ++F EM  +G + N V ++ ++  LC
Sbjct: 240 YVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
              +++EA  L   M      P    Y  L+   C + R + A  L   ME  G K N+ 
Sbjct: 300 VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y++LI+  C   ++E A  L  +ML KG+ P V+TYN L  G  +   +E A  + + M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +   +  +T  Y   I G CK   + +A+ +   +   K   D+ +Y+ LIDG C+SG  
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+ L   +    L+ D  TY  MI +LC   ++++A DLF  +E K V P+ V +  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  +  + ++   +L +M  +N
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKN 562



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 211/452 (46%), Gaps = 64/452 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  PNVITY+ LING C+ G    AL++ E M + N       +P+  
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN------LRPNTR 429

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK   V KA  +L +M ++ + PDVVTYNS+I G C + + + A RL   M
Sbjct: 430 TYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+  T++ ++D LCK+ ++EEA  L + + Q  V PN  +Y  L+DG+C  G+V
Sbjct: 489 NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKV 548

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  +   M S  C  N  +++ LI+G C + +++ A  L  +M+   ++PTV T   L
Sbjct: 549 NEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +    + A++ F +M   G   D   Y TFI   C+ G + +A ++   ++    
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV 668

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAW------------------------------------ 325
             D+ +YS LI G    GR   A+                                    
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGG 728

Query: 326 -----------------ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
                            EL   +    +  +  +Y  ++  +C  G +  A  +F  M+ 
Sbjct: 729 EPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ 788

Query: 369 K-GVAPDCVAFNTLMLGCI---RNNETSKVVE 396
           K G++P  + FN L+  C    ++NE +KVV+
Sbjct: 789 KEGISPSELVFNALLSCCCKLEKHNEAAKVVD 820



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 189/371 (50%), Gaps = 2/371 (0%)

Query: 35  TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
           T+  L+L  +M N +  F +  K     Y T+++ L + G VD+ K++ ++M +  + P+
Sbjct: 159 TLFVLDLCRKM-NKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + TYN ++ G+C   +  EA +    +++ G+ P+  T++ ++   C+   ++ A ++ +
Sbjct: 218 IYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFK 277

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G R N   Y  L+ G C+  R++ A +LFV M+   C   V +Y++LI   C ++
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSE 337

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
               AL+L  EM  KGIKP + TY  L   L    ++E+A +L  +M   G+  +   Y 
Sbjct: 338 RKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYN 397

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             I+G CK G I +AL++   +       + R+Y+ LI G CK    K    L   L R 
Sbjct: 398 ALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERK 457

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           VL  DVVTYN +I   C  G  D A+ L   M  +G+ PD   + +++    ++    + 
Sbjct: 458 VL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEA 516

Query: 395 VELLHRMDERN 405
            +L   +++++
Sbjct: 517 CDLFDSLEQKD 527



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 168/361 (46%), Gaps = 48/361 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-------------- 47
           EA  +  K+ +  C PN +T++ LI+GLC  G    A  L E+M+               
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609

Query: 48  ----GNGEFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                +G+F               KPDA  YTT I   C+EG +  A++++ +MK+  ++
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC--KNGKMEEAS 150
           PD+ TY+S+I+G+     +N A  +   M D G +P+  TF  ++  L   K GK++   
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGE 729

Query: 151 ----------------QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
                           +LLE M++ GV PNA  Y  LM G C  G +  A+++F  M+  
Sbjct: 730 PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789

Query: 195 -GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +   ++ L++  CK ++   A  +  +M+  G  P + +   L   L++  + ER
Sbjct: 790 EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKER 849

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              +F  + + G   D  A++  IDG+ K G +    ELF  +    C    ++YS LI+
Sbjct: 850 GTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909

Query: 314 G 314
           G
Sbjct: 910 G 910


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 217/398 (54%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +++  G  P+V+TY++LI+G  + G      +LF EM +      V C PD + Y  
Sbjct: 311 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCVPDIITYNG 364

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+  CK   + +A E   +MK+  + P+VVTY+++I  FC       A +LF++M   G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++D  CK G + EA +LL  M+Q GV+ N   Y  L+DG C  GR+  A+
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM   G   N   Y+ L++GY K + +E A+ +  +M    IKP ++ Y ++  G 
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++E    + +EM+  G++A+     T ID   K G   +AL  F+ ++ +  E  I
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  LIDGLCK+G +++A + F  +    L  +V  Y  +I  LC +  ++ A  LF +
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+ +G+ PD  AF  L+ G +++    + + L+ RM E
Sbjct: 665 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 702



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E A+LF ++K  GC P++ITY+ LIN  C+      A   F EM N NG      KP+ V
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVV 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID  CKEG +  A +L + M+   + P+  TY S+I   C A +  EA +L  +M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+ N+VT++ ++D LCK G+M EA ++   M++ G+ PN  VY  L+ G+    R+
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M     K ++  Y  +I G+C  +++E    +  EM S+GI    V   T+
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+  +   A   F EMQ  GV A    Y   IDGLCK G +  A++ F  +  L  
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGL 635

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LIDGLCK+  ++ A +LF  +    +  D+  +  +I      G + +A  
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 695

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M    +  D   + +L+ G  +  E  +  +  + M E+
Sbjct: 696 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 197/370 (53%), Gaps = 8/370 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  ++  G  PN  TY++LI+  C+ G+   A  L  +M+      GV  K + V 
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVT 466

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT ++DGLCK G + +A+E+   M    I+P+   Y +++ G+  A    +A ++  +M 
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++P+++ +  I+   C   K+EE   +LE M   G+  N  +  T++D +   G+ +
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A   F  M+ +G +  + +Y +LI+G CK   +E A+  +  MLS G++P V  Y +L 
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL + + +E A KLFDEMQ  G+  D  A+   IDG  K+G + EAL L   +  L  E
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            D+  Y+ L+ G  + G L  A + F+ +  +G+L  +V+    ++      G++D+A +
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCI-CLLREYYKRGQLDEAIE 765

Query: 362 LFLDMEAKGV 371
           L  +ME  G+
Sbjct: 766 LKNEMERMGL 775



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 186/350 (53%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C   + ++  +     + G +++A E   +M++    P   + N ++     + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           ++ F +M+  G+ P+V T++V++D LCK G +E + +L   M ++G+ P+   YN+L+DG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G +     LF  M+ +GC  ++ +Y+ LIN YCK +++  A   +SEM + G+KP 
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+TL     +   ++ A KLF +M+R G+  + + Y + ID  CK G + EA +L  
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I +Y+ L+DGLCK+GR+  A E+F S+ +  +  +   Y  ++H      
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M+ A  +   M    + PD + + +++ G     +  +   +L  M  R
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 153/293 (52%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA   F  M +    P   + + ++  L K+G  +   +    MI  G+ P+ F YN ++
Sbjct: 237 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMI 296

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D  C  G +  ++ LFV M  MG   +V +Y+ LI+GY K   +E   SL++EM   G  
Sbjct: 297 DYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 356

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P ++TYN L     +  ++ RAF+ F EM+ +G+  +   Y T ID  CK G +  A++L
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +R      +  +Y+ LID  CK+G L  AW+L + + +  +  ++VTY  ++  LC 
Sbjct: 417 FVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G+M +A ++F  M   G++P+   +  L+ G I+       +++L +M E N
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 76/339 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G + N++TY+ L++GLC+ G  I A  +F  M+           P+  
Sbjct: 447 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG------ISPNQQ 500

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY-------------- 107
           +YT ++ G  K   ++ A ++L QM + NI PD++ Y S+I G C               
Sbjct: 501 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 560

Query: 108 ---------------------ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                A  S++A   F EM D GV+  +VT+ V++D LCK G +
Sbjct: 561 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIV 620

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A      M+ +G++PN  VY +L+DG C    +  AK+LF  M+  G   ++ +++ L
Sbjct: 621 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTAL 680

Query: 207 INGYCKNKEIEGALSL-----------------------------------YSEMLSKGI 231
           I+G  K+  ++ AL L                                   ++EM+ KGI
Sbjct: 681 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 740

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            P  V    L    ++  Q++ A +L +EM+R G+  ++
Sbjct: 741 LPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITES 779


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K  G  P+ +TY+++I+G  + G     +  FEEM +      + C+PD + 
Sbjct: 149 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 202

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  CK G +    E   +MK   + P+VV+Y++++  FC      +A + +++M 
Sbjct: 203 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 262

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  T++ ++D  CK G + +A +L   M+Q+GV  N   Y  L+DG C   R+ 
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 322

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ELF  M++ G   N+ SY+ LI+G+ K K ++ AL L +E+  +GIKP ++ Y T  
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + ++E A  + +EM+  G+ A++  Y T +D   K+G   E L L   ++ L  E
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
           + + ++  LIDGLCK+  +  A + F+ +     L A+   +  MI  LC D +++ A  
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M  KG+ PD  A+ +LM G  +     + + L  +M E
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 544



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 199/397 (50%), Gaps = 7/397 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++K   CEP+VITY+ LIN  C+ G   + L  + EM  GNG      KP+ V Y+T
Sbjct: 187 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYST 240

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++D  CKEG + +A +  + M+   + P+  TY S+I   C   + ++A RL  EM+  G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+ NVVT++ ++D LC   +M+EA +L   M   GV PN   YN L+ GF     ++RA 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   ++  G K ++  Y   I G C  ++IE A  + +EM   GIK   + Y TL    
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELD 304
           F+         L DEM+   +      +   IDGLCKN  + +A++ F R       + +
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              ++ +IDGLCK  +++ A  LF  + +  L+ D   Y  ++      G + +A  L  
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 540

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M   G+  D +A+ +L+ G    N+  K    L  M
Sbjct: 541 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 187/343 (54%), Gaps = 2/343 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L   G +++A +   +MK   + P   + N ++  F     +++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           KR F +M+  G +P V T+++++D +CK G +E A  L E M   G+ P+   YN+++DG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  Y EM   G+KP 
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV+Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++ +Y+ LIDGLC + R+K A ELF  +    +I ++ +YN +IH      
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG--CIRNNETSKVV 395
            MD+A +L  +++ +G+ PD + + T + G   +   E +KVV
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 175/331 (52%), Gaps = 7/331 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   +  ++  G  PN  TY++LI+  C+ G+   A  L  EM+    E+ VV      
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV------ 306

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLC    + +A+EL  +M    + P++ +YN++I GF  A + + A  L  E+
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+++ +   +  LC   K+E A  ++  M + G++ N+ +Y TLMD +  +G  
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
                L   M+ +  +  V ++ +LI+G CKNK +  A+  ++ + +  G++     +  
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 486

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL + +QVE A  LF++M + G+  D  AY + +DG  K G ++EAL L   +  + 
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +LD+ +Y+ L+ GL    +L+ A      +
Sbjct: 547 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 178/389 (45%), Gaps = 6/389 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P    +  L + L   G    A+  F +M      F V   P       ++    K G
Sbjct: 56  CVPGFGVFDALFSVLIDLGMLEEAIQCFSKM----KRFRVF--PKTRSCNGLLHRFAKLG 109

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
             D  K     M      P V TYN +I   C   D   A+ LF EM  +G+ P+ VT++
Sbjct: 110 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 169

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D   K G++++     E M  +   P+   YN L++ FC  G++    E +  M+  
Sbjct: 170 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 229

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G K NV SYS L++ +CK   ++ A+  Y +M   G+ P   TY +L     +I  +  A
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           F+L +EM + GV  +   Y   IDGLC    + EA ELF  +       ++ SY+ LI G
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             K+  +  A EL + L    +  D++ Y   I  LC+  K++ A  +  +M+  G+  +
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + + TLM    ++   ++ + LL  M E
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 7/292 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G  PN+ +Y+ LI+G  +  +   AL L  E+  G G      KPD +
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 376

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T I GLC    ++ AK ++ +MK+  I  + + Y +++  +  + +  E   L  EM
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  ++  VVTF V++D LCKN  + +A      +    G++ NA ++  ++DG C   +
Sbjct: 437 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 496

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  LF  M   G   +  +Y+ L++G  K   +  AL+L  +M   G+K  ++ Y +
Sbjct: 497 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           L  GL   +Q+++A    +EM   G+  D     + +    + G I EA+EL
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 7/263 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +LK  G +P+++ Y T I GLC       A  +  EM     E G+  K +++I
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM----KECGI--KANSLI 412

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT++D   K G   +   LL +MK+ +I   VVT+  +I G C     ++A   F  + 
Sbjct: 413 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 472

Query: 123 -DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+Q N   F+ ++D LCK+ ++E A+ L E M+Q G+ P+   Y +LMDG    G V
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M  +G K ++ +Y+ L+ G     +++ A S   EM+ +GI P  V   ++
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 592

Query: 242 FIGLFEIHQVERAFKLFDEMQRH 264
               +E+  ++ A +L   + +H
Sbjct: 593 LKKHYELGCIDEAVELQSYLMKH 615


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 211/383 (55%), Gaps = 10/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA    +K+   G +P+  TY++LI G C+      A  +F EM + G       C+ + 
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-------CRRNE 288

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I GLC    +D+A +L ++MKD    P V TY  +I+  C +   +EA  L  E
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G++PN+ T++V++D LC   K E+A +LL  M++ G+ PN   YN L++G+C  G 
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   MES     N  +Y+ LI GYCK+  +  A+ + ++ML + + P VVTYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G       + A++L   M   G+  D W Y + ID LCK+  + EA +LF +L    
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++  Y+ LIDG CK+G++  A  +   +     + + +T+N +IH LCADGK+ +A 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 361 DLFLDMEAKGVAPDCVAFNTLML 383
            L   M   G+ P  V+ +T+++
Sbjct: 588 LLEEKMVKIGLQP-TVSTDTILI 609



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+K   C P V TY+ LI  LC +     ALNL +EM     E G+  KP+  
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGI--KPNIH 359

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +ID LC +   +KA+ELL QM +K + P+V+TYN++I G+C      +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PN  T++ ++   CK+  + +A  +L  M++  V P+   YN+L+DG C +G  
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   + ++Y+ +I+  CK+K +E A  L+  +  KG+ P VV Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V+ A  + ++M       ++  +   I GLC +G + EA  L   +  +  
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + + + LI  L K G    A+  F  +       D  TY   I   C +G++  A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M   GV+PD   +++L+ G     +T+   ++L RM
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   GC  N + Y+ LI+GLC       A++LF +M +        C P    
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE------CFPTVRT 325

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I  LC      +A  L+ +M++  I P++ TY  +I   C      +A+ L  +M+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ PNV+T++ +++  CK G +E+A  ++ELM    + PN   YN L+ G+C    V+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVH 444

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  +   M       +V +Y+ LI+G C++   + A  L S M  +G+ P   TY ++ 
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +VE A  LFD +++ GV  +   Y   IDG CK G + EA  +   +    C 
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI GLC  G+LK A  L   + +  L   V T  I+IH L  DG  D A+  
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M + G  PD   + T +    R        +++ +M E
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 30/409 (7%)

Query: 22  YSTLINGLCRTG-------------HTIVALNL--FEEMINGNGEFGVV----------- 55
           Y+TL+N L R G                V  N+  + +M+NG  + G V           
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 56  ---CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
                PD   YT++I G C+   +D A ++  +M  K    + V Y  +I G C A   +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA  LF++M D    P V T++V++  LC + +  EA  L++ M + G++PN   Y  L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D  C   +  +A+EL   M   G   NV +Y+ LINGYCK   IE A+ +   M S+ + 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P   TYN L  G  +   V +A  + ++M    V  D   Y + IDG C++G    A  L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +       D  +Y+ +ID LCKS R++ A +LF SL +  +  +VV Y  +I   C 
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            GK+D+AH +   M +K   P+ + FN L+ G   + +  +   L  +M
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 203/407 (49%), Gaps = 30/407 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  PNVITY+ LING C+ G    A+++ E M +          P+  
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTR 429

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK   V KA  +L +M ++ + PDVVTYNS+I G C + + + A RL   M
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+  T++ ++D LCK+ ++EEA  L + + Q GV PN  +Y  L+DG+C  G+V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M S  C  N  +++ LI+G C + +++ A  L  +M+  G++PTV T   L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +    + A+  F +M   G   D   Y TFI   C+ G +++A ++   +R    
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS LI G    G+   A+++   +          T+  +I  L           
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL----------- 717

Query: 362 LFLDM---EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             L+M   + KG  P+  A + +M       E   VVELL +M E +
Sbjct: 718 --LEMKYGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHS 755



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 2/372 (0%)

Query: 33  GHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           G  +  L+L  +M N +  F +  K     Y T+++ L + G VD+ K++ ++M +  + 
Sbjct: 157 GDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++ TYN ++ G+C   +  EA +   ++++ G+ P+  T++ ++   C+   ++ A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M   G R N   Y  L+ G C+  R++ A +LFV M+   C   V +Y++LI   C 
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++    AL+L  EM   GIKP + TY  L   L    + E+A +L  +M   G+  +   
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G I +A+++   +   K   + R+Y+ LI G CKS   K    L   L 
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R VL  DVVTYN +I   C  G  D A+ L   M  +G+ PD   + +++    ++    
Sbjct: 456 RKVL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 393 KVVELLHRMDER 404
           +  +L   ++++
Sbjct: 515 EACDLFDSLEQK 526



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 196/397 (49%), Gaps = 27/397 (6%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY++LI+G CR+G+   A  L   M     + G+V  PD   YT++ID LCK   V
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRV 513

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A +L   ++ K +NP+VV Y ++I G+C A   +EA  +  +M+ +   PN +TF+ +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC +GK++EA+ L E M++IG++P       L+      G  + A   F  M S G 
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K +  +Y+  I  YC+   +  A  + ++M   G+ P + TY++L  G  ++ Q   AF 
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693

Query: 257 LFDEMQRHGVAADTWAYRTFIDGL---------------CKNGYIVE---ALELFRTLRI 298
           +   M+  G       + + I  L               C    ++E    +EL   +  
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKM 356
                + +SY  LI G+C+ G L++A ++F  + R  G+  +++V +N ++   C   K 
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKKH 812

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           ++A  +  DM   G  P   +   L+ G  +  E  +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 25/332 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G +P V T + LI+ L + G    A + F++M++         KPDA 
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG------TKPDAH 638

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT I   C+EG +  A++++ +M++  ++PD+ TY+S+I+G+     +N A  +   M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

Query: 122 MDQGVQPNVVTFSVIMD---------------ELCKNGKMEE---ASQLLELMIQIGVRP 163
            D G +P+  TF  ++                ELC    M E     +LLE M++  V P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           NA  Y  L+ G C  G +  A+++F  M+ + G   +   ++ L++  CK K+   A  +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             +M+  G  P + +   L  GL++  + ER   +F  + + G   D  A++  IDG+ K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            G +    ELF  +    C+   ++YS LI+G
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 25/263 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +  K++  G  P++ TYS+LI G    G T  A ++ + M +        C+P  
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQ 707

Query: 61  VIYTTIIDGLCKEGF------------------VDKAKELLLQMKDKNINPDVVTYNSVI 102
             + ++I  L +  +                   D   ELL +M + ++ P+  +Y  +I
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 103 RGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
            G C   +   A+++F  M  ++G+ P+ + F+ ++   CK  K  EA+++++ MI +G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P       L+ G    G   R   +F ++   G   +  ++ I+I+G  K   +E    
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 222 LYSEMLSKGIKPTVVTYNTLFIG 244
           L++ M   G K +  TY+ L  G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/399 (34%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  PNV TY+ LI G C  G+  + L  F EM   NG     C P+ V 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM-ERNG-----CLPNVVT 240

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIID  CK   + +A +LL  M  K +NP++++YN VI G C      E   +  EM 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   P+ VTF+ +++  C  G   +A  L   M++ G+ PN   Y TL++  C  G +N
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA E    M   G   N  +Y+ LI+G+ +   ++ A  +  EM+  G  PT++TYN L 
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   + ++E A  L  EM   G   D  +Y T I G C+N  + +A +L   +      
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGIS 480

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YS LI GLCK  RL    +LF  +    L  D VTY  +I+A C +G +DKA  L
Sbjct: 481 PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG +PD V +N L+ G  + + T +   LL ++
Sbjct: 541 HDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 203/381 (53%), Gaps = 8/381 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYT 64
            F +++  GC PNV+TY+T+I+  C+      A  L   M + G         P+ + Y 
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG-------LNPNLISYN 277

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I+GLC+EG + +  E+L +M  +   PD VT+N++I G+C   + ++A  L  EM+  
Sbjct: 278 VVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNVVT++ +++ +CK G +  A + L+ M   G+ PN   Y TL+DGF   G + +A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ++   M   G    + +Y+ LING+C    +E A  L  EM+ +G  P VV+Y+T+  G
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                ++E+AF+L  EM   G++ D   Y + I GLCK   + E  +LF+ +  L    D
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI+  C  G L  A  L   + +     D+VTYN++I+      +  +A  L L
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 365 DMEAKGVAPDCVAFNTLMLGC 385
            +  +   P+ + +NTL+  C
Sbjct: 578 KLLYEESVPNEITYNTLIDNC 598



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 202/383 (52%), Gaps = 27/383 (7%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +T++TLING C  G+   AL L  EM+  NG       P+ V YTT+I+ +CK G +
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNL 359

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A E L QM+D+ ++P+  TY ++I GF       +A ++  EM++ G  P ++T++ +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  C  G+ME+AS LL+ MI+ G  P+   Y+T++ GFC    + +A +L V M + G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G CK + +     L+ EMLS G+ P  VTY +L         +++A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE-------------- 302
           L DEM + G + D   Y   I+G  K     EA  L   L++L  E              
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDN 597

Query: 303 ---LDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDK 358
              L+ +S   L+ G C  G +  A  +  S L +G  + + V YN++IH     G ++K
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV-YNVIIHGHSKVGNIEK 656

Query: 359 AHDLFLDMEAKGVAPDCVAFNTL 381
           A++L+ +M   G AP  V    L
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 204/382 (53%), Gaps = 7/382 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDA 60
           +A ++    K++G  P V++Y+ +++ + RT  ++ +A  +F+EM+    E GV   P+ 
Sbjct: 150 KALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV----ESGV--SPNV 203

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I G C  G ++       +M+     P+VVTYN++I  +C      EA +L   
Sbjct: 204 YTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN+++++V+++ LC+ G+M+E S++LE M +    P+   +NTL++G+C  G 
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A  L   M   G   NV +Y+ LIN  CK   +  A+    +M  +G+ P   TY T
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   +++A+++  EM  +G       Y   I+G C  G + +A  L + +    
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ SYS +I G C++  L+ A++L   +    +  DV TY+ +I  LC   ++ +  
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           DLF +M + G+ PD V + +L+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLI 525



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 175/343 (51%), Gaps = 1/343 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-A 114
           CK  + ++  ++    +   ++KA  ++   K     P V++YN+++        S + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + +F EM++ GV PNV T+++++   C  G +E        M + G  PN   YNT++D 
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C   ++  A +L   M   G   N+ SY+++ING C+  +++    +  EM  +   P 
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VT+NTL  G   +    +A  L  EM ++G++ +   Y T I+ +CK G +  A+E   
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      + R+Y+ LIDG  + G LK A+++   +        ++TYN +I+  C  G
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +M+ A  L  +M  +G  PD V+++T++ G  RN E  K  +L
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 23/308 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   G  P +ITY+ LING C  G    A  L +EMI    E G +  PD V
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI----ERGFI--PDVV 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TII G C+   ++KA +L ++M  K I+PDV TY+S+I+G C      E   LF EM
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+ VT++ +++  C  G +++A +L + MIQ G  P+   YN L++GF    R 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS----------------E 225
             AK L + +       N  +Y+ LI+  C N E + AL+L                   
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLMNEADRVLES 628

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML KG K     YN +  G  ++  +E+A+ L+ EM   G A  +         L   G 
Sbjct: 629 MLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688

Query: 286 IVEALELF 293
            VE  +L 
Sbjct: 689 EVELNQLL 696



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 1/272 (0%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR-VNRAKELFVSM 191
           F +++    +   + +A  ++ L    G  P    YN ++D    T + V  A+ +F  M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   NV++Y+ILI G+C    +E  L  + EM   G  P VVTYNT+     ++ ++
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AFKL   M   G+  +  +Y   I+GLC+ G + E  E+   +   +   D  +++ L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+G C  G    A  L   + +  L  +VVTY  +I+++C  G +++A +    M  +G+
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            P+   + TL+ G  +     +  +++  M E
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE-IEGAL 220
           + ++ V++ ++        +N+A  +    +S G    V SY+ +++   + K+ ++ A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++ EM+  G+ P V TYN L  G      +E     F EM+R+G   +   Y T ID  
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   I EA +L R + +     ++ SY+ +I+GLC+ G++K   E+   + +   + D 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VT+N +I+  C  G   +A  L  +M   G++P+ V + TL+    +    ++ +E L +
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 401 MDER 404
           M +R
Sbjct: 369 MRDR 372



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 44/201 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           E   LF ++ + G  P+ +TY++LIN  C  G    AL L +EMI       +V      
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 58  -------------------------PDAVIYTTIID---------------GLCKEGFVD 77
                                    P+ + Y T+ID               G C +G ++
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMN 620

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  +L  M  K    +   YN +I G     +  +A  L+ EM+  G  P+ VT   + 
Sbjct: 621 EADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALA 680

Query: 138 DELCKNGKMEEASQLLELMIQ 158
             L   GK  E +QLL+  ++
Sbjct: 681 KSLYHEGKEVELNQLLDYTLK 701


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G  PN ITY+T+I+G  + G       L ++M++         KP+ V
Sbjct: 34  DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP------KPNIV 87

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+ G +D+ + L+ +M   ++ PD  TY+ +  G     +S     LF E 
Sbjct: 88  TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV     T S++++ LCK+GK+ +A Q+LE+++  G+ P   +YNTL++G+C    +
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M+S   + +  +Y+ LING CK + +  A  L  EM   G+ P+V T+NTL
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 267

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   Q+E+ F +  +MQ+ G+ +D  ++ + +   CKNG I EA+ +   +     
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + + Y+ +ID   +SG  + A+ L   +    + A +VTYN+++  LC   ++D+A +
Sbjct: 328 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 387

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   +  +G+ PD V++NT++  C    +T K +ELL  M++
Sbjct: 388 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 429



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++ +    P+  TYS L +GL RTG +   L+LF E +      G      A 
Sbjct: 104 ETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG------AY 157

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G V KA+++L  +    + P  V YN++I G+C   D   A  +F +M
Sbjct: 158 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +T++ +++ LCK   + +A  L+  M + GV P+   +NTL+D +   G++
Sbjct: 218 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +   M+  G K +V S+  ++  +CKN +I  A+++  +M+ K + P    YN++
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E    E+AF L ++M+  GV+A    Y   + GLC++  I EA EL  TLR    
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 397

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ +I   C  G    A EL   + +  +   + TY+ ++ AL + G++     
Sbjct: 398 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 457

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+  M  K V P    +  ++   +R    SKV  L   M E+
Sbjct: 458 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 500



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 180/344 (52%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PDA  Y  +I GL + G    A ++  +M D  + P+ +TYN++I G     D     RL
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+  G +PN+VT++V++  LC+ G+M+E   L++ M    + P+ F Y+ L DG   
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           TG       LF      G     ++ SIL+NG CK+ ++  A  +   ++  G+ PT V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  G  ++  +  AF +F++M+   +  D   Y   I+GLCK   + +A +L   + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  + +++ LID    +G+L+  + +   + +  + +DV+++  ++ A C +GK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A  +  DM  K VAP+   +N+++   I + +T +   L+ +M
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 29/296 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------IN 47
           A  +F ++K+    P+ ITY+ LINGLC+      A +L  EM               I+
Sbjct: 210 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 269

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
             G  G +               K D + + +++   CK G + +A  +L  M  K++ P
Sbjct: 270 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 329

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +   YNS+I  +  + D+ +A  L  +M + GV  ++VT+++++  LC++ +++EA +L+
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             +   G+RP+   YNT++   C  G  ++A EL   M   G +  + +Y  L++     
Sbjct: 390 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 449

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             +     LY +ML K ++P+   Y  +           +   L  EM   G+A D
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K  G  P+ +TY+++I+G  + G     +  FEEM +      + C+PD + 
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 334

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  CK G +    E   +MK   + P+VV+Y++++  FC      +A + +++M 
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  T++ ++D  CK G + +A +L   M+Q+GV  N   Y  L+DG C   R+ 
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ELF  M++ G   N+ SY+ LI+G+ K K ++ AL L +E+  +GIKP ++ Y T  
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + ++E A  + +EM+  G+ A++  Y T +D   K+G   E L L   ++ L  E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
           + + ++  LIDGLCK+  +  A + F+ +     L A+   +  MI  LC D +++ A  
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M  KG+ PD  A+ +LM G  +     + + L  +M E
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 200/401 (49%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +    F ++K   CEP+VITY+ LIN  C+ G   + L  + EM  GNG      KP+ V
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVV 368

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++D  CKEG + +A +  + M+   + P+  TY S+I   C   + ++A RL  EM
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+ NVVT++ ++D LC   +M+EA +L   M   GV PN   YN L+ GF     +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA EL   ++  G K ++  Y   I G C  ++IE A  + +EM   GIK   + Y TL
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILK 300
               F+         L DEM+   +      +   IDGLCKN  + +A++ F R      
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +   ++ +IDGLCK  +++ A  LF  + +  L+ D   Y  ++      G + +A 
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M   G+  D +A+ +L+ G    N+  K    L  M
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 187/343 (54%), Gaps = 2/343 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L   G +++A +   +MK   + P   + N ++  F     +++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           KR F +M+  G +P V T+++++D +CK G +E A  L E M   G+ P+   YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  Y EM   G+KP 
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV+Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++ +Y+ LIDGLC + R+K A ELF  +    +I ++ +YN +IH      
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG--CIRNNETSKVV 395
            MD+A +L  +++ +G+ PD + + T + G   +   E +KVV
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 178/389 (45%), Gaps = 6/389 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P    +  L + L   G    A+  F +M      F V   P       ++    K G
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKM----KRFRVF--PKTRSCNGLLHRFAKLG 241

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
             D  K     M      P V TYN +I   C   D   A+ LF EM  +G+ P+ VT++
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D   K G++++     E M  +   P+   YN L++ FC  G++    E +  M+  
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G K NV SYS L++ +CK   ++ A+  Y +M   G+ P   TY +L     +I  +  A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           F+L +EM + GV  +   Y   IDGLC    + EA ELF  +       ++ SY+ LI G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             K+  +  A EL + L    +  D++ Y   I  LC+  K++ A  +  +M+  G+  +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + + TLM    ++   ++ + LL  M E
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 7/292 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   G  PN+ +Y+ LI+G  +  +   AL L  E+  G G      KPD +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 508

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T I GLC    ++ AK ++ +MK+  I  + + Y +++  +  + +  E   L  EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  ++  VVTF V++D LCKN  + +A      +    G++ NA ++  ++DG C   +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  LF  M   G   +  +Y+ L++G  K   +  AL+L  +M   G+K  ++ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           L  GL   +Q+++A    +EM   G+  D     + +    + G I EA+EL
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 135/264 (51%), Gaps = 7/264 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  +LK  G +P+++ Y T I GLC       A  +  EM     E G+  K +++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM----KECGI--KANSL 543

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT++D   K G   +   LL +MK+ +I   VVT+  +I G C     ++A   F  +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D G+Q N   F+ ++D LCK+ ++E A+ L E M+Q G+ P+   Y +LMDG    G 
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  L   M  +G K ++ +Y+ L+ G     +++ A S   EM+ +GI P  V   +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723

Query: 241 LFIGLFEIHQVERAFKLFDEMQRH 264
           +    +E+  ++ A +L   + +H
Sbjct: 724 VLKKHYELGCIDEAVELQSYLMKH 747


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 211/402 (52%), Gaps = 12/402 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE---EMINGNGEFGVVCKPDAVI 62
           L  ++   GC PNV T++TLI  LCR G       LFE   E ++   E G  C PD  +
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNG-------LFEQVHEALSQMPEHG--CTPDLRM 285

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG+CK+G  + A ++L +M    + P+VV YN+V++G C A    EA+ L  EM 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +    + VTF++++D  C+NG ++   +LLE M++ G  P+   Y T+++GFC  G V+
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L  +M + GCK N  SY+I++ G C+ +    A  L S M+ +G  P  VT+NTL 
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             + +   VE+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +      
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   YS +   L + GR     ++F S+    + +D   YN +I +LC   + D+A D 
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDF 585

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M + G  P+   +  L+ G        +  +LL  +  R
Sbjct: 586 FAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 198/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  KL +FGCEP++++Y+ ++ GLC          L  EM+       V C P+  
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR------VGCPPNVA 249

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 250 TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + EEA  LL  M Q     +   +N L+D FC  G V
Sbjct: 310 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 369

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M   GC  +V +Y+ +ING+CK   ++ A+ L   M + G KP  ++Y  +
Sbjct: 370 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 429

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L   M + G   +   + T I+ +CK G + +A+EL + + +  C
Sbjct: 430 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ M  AL  +G+ DK   
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  ++   V  D   +N ++    +  ET + ++    M
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 205/414 (49%), Gaps = 29/414 (7%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEM-------------------INGNGEFGVV-- 55
           PN  TY  ++  LC  G    AL + +EM                     G G    V  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 56  --------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                   C  D+     ++  +C++G VD+  ELL ++      PD+V+YN+V++G C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A   ++ + L +EM+  G  PNV TF+ ++  LC+NG  E+  + L  M + G  P+  +
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y T++DG C  G    A ++   M S G K NV  Y+ ++ G C  +  E A  L +EM 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +      VT+N L     +   V+R  +L ++M  HG   D   Y T I+G CK G + 
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           EA+ L + +    C+ +  SY+ ++ GLC++ R   A EL   + +   + + VT+N +I
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +C  G +++A +L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 12/379 (3%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           S LI  LC  G T  A    +   +  G          V Y  +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
              +    + P+  TY  ++R  C      +A  +  EM  +G         VI++  C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            G    A + L+++   G   ++   N ++   C  G V+   EL   + S GC+ ++ S
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ ++ G C  K  +    L  EM+  G  P V T+NTL   L      E+  +   +M 
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
            HG   D   Y T IDG+CK+G+   A ++   +     + ++  Y+ ++ GLC + R +
Sbjct: 276 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 335

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +L   + +     D VT+NI++   C +G +D+  +L   M   G  PD + + T++
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  +     + V LL  M
Sbjct: 396 NGFCKEGLVDEAVMLLKNM 414



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 6/228 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + A GC+PN I+Y+ ++ GLCR    + A  L   MI         C P+ V
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG------CLPNPV 459

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I+ +CK+G V++A ELL QM     +PD+++Y++VI G   A  + EA  L   M
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN + +S +   L + G+ ++  Q+ + +    VR +A +YN ++   C     
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 579

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +RA + F  M S GC  N  +Y+ILI G      +  A  L SE+ S+
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 6/340 (1%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + +I  LC  G    A   L    D      VV YN++I G+C A    +          
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAG---QVAAARRLAAA 101

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
             V PN  T+  I+  LC  G + +A  +L+ M   G      + + +++  C  G    
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A      + + GC  +  + +++++  C+   ++  + L  ++ S G +P +V+YN +  
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL    + +   +L  EM R G   +   + T I  LC+NG   +  E    +    C  
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+R Y+ +IDG+CK G  ++A ++   +P   L  +VV YN ++  LC+  + ++A DL 
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +M  +    D V FN L+    +N    +V+ELL +M E
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L + +   GC PN +T++TLIN +C+ G    A+ L ++M +NG       C PD
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG-------CSPD 492

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I P+ + Y+S+         +++  ++F 
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ +   ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A++L   + S     KH V  + I+
Sbjct: 613 LVREAQDLLSELCSRRAVRKHLVRHFGIV 641


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 221/405 (54%), Gaps = 9/405 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G  PNVI YS L+ G CR+G       +FEEM       GV  +PD ++
Sbjct: 169 ALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEM----SRLGV--EPDVIM 222

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T  ID LCK+G + KA ++   M  + + P+VVTYN +I   C      EA  L  EM 
Sbjct: 223 FTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGR 180
           D+GV P+VVT++ ++  L    +M+ A  LLE MIQ    V P+   +N+++ G C  GR
Sbjct: 283 DKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGR 342

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  +   M   GC  N+ +Y+ LI G+ +  ++  A++L SE++S G++P   TY+ 
Sbjct: 343 MRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSI 402

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ +V+RA      M + G+ A+ + Y   +  LC+ G + +A+ LF  +  + 
Sbjct: 403 LINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD-MN 461

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +YS ++ G CKSG +K A +L   +    L  D VTY+I+I+     G +++A 
Sbjct: 462 CGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAE 521

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +   M A G  PD   F++L+ G     + +K+++L+H M  +N
Sbjct: 522 RVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKN 566



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 221/441 (50%), Gaps = 51/441 (11%)

Query: 2   EAAALFTKLKAFGCEPNV---ITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCK 57
           EA +L + L      P+V   ++Y+ ++  LCR G  +  AL+L  +M   + E     +
Sbjct: 62  EACSLLSAL------PDVRDAVSYNIVLAALCRRGGDLRQALSLLADM---SREAHPAAR 112

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+AV YT ++ GLC     D+A  LL  M+   +  DVVTY ++IRG C A + + A  L
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM   GV PNV+ +S ++   C++G+ ++ S++ E M ++GV P+  ++   +D  C 
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR+ +A ++   M   G + NV +Y++LIN  CK   +  AL+L +EM  KG+ P VVT
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           YNTL  GL  + +++ A  L +EM +    V  D   + + I GLCK G + +A+ +   
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH------- 348
           +    C  ++ +Y+ LI G  +  ++ +A  L   L    L  D  TY+I+I+       
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 349 ----------------------------ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
                                       ALC  G M++A  LF +M+      D VA++T
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYST 471

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           +M G  ++ +     +LL  M
Sbjct: 472 MMYGACKSGDIKAAKQLLQDM 492



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 156/303 (51%), Gaps = 5/303 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G  P+V+TY+TLI GL        A+ L EEMI G+     + +PD V
Sbjct: 273 EALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGD----TLVEPDVV 328

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++I GLCK G + +A  +   M ++    ++VTYN +I GF   +  N A  L  E+
Sbjct: 329 TFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSEL 388

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P+  T+S++++   K  +++ A   L  M Q G+R   F Y  L+   C  G +
Sbjct: 389 ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMM 448

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  M+ M C  +  +YS ++ G CK+ +I+ A  L  +ML +G+ P  VTY+ L
Sbjct: 449 EQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSIL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++  +E A ++  +M   G   D   + + I G    G I + L+L   +R    
Sbjct: 508 INMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNV 567

Query: 302 ELD 304
            +D
Sbjct: 568 AID 570



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 13/209 (6%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTV---VTYNTLFIGLFEIH-QVERAFKLFD 259
           + L+N   +   +  A SL S +      P V   V+YN +   L      + +A  L  
Sbjct: 48  AALLNRRLRAAPVTEACSLLSAL------PDVRDAVSYNIVLAALCRRGGDLRQALSLLA 101

Query: 260 EMQRHGVAA---DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +M R    A   +  +Y   + GLC +    EA+ L R+++      D+ +Y  LI GLC
Sbjct: 102 DMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLC 161

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +  L  A EL   +    +  +V+ Y+ ++   C  G+      +F +M   GV PD +
Sbjct: 162 DAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVI 221

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            F   +    +     K V++   M +R 
Sbjct: 222 MFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 211/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++     +PNV+ Y+ LI+G  R G+   A  + +EM+          +P+ +
Sbjct: 205 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG------VQPNKI 258

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCK G +D+A  LL QM   +  PD +TYN +I G    ++  +A RL  EM
Sbjct: 259 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEM 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV T+S+++  LC++G+ E+AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 178 -------------------------------TGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP  V Y  L    F+   +E+    F  M   GV
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  YS LI GLCK+   + A+ 
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   + +  +  ++V YN +I  LC  G +  A ++F  + AKG+ P+CV + +L+ G  
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 387 RNNETSKVVELLHRM 401
           +  + S    L + M
Sbjct: 619 KVGDISNAFYLYNEM 633



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 207/404 (51%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAF----GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           +A AL  K++ F    G  P+V TYSTLI   C+      A  +  EM     E G  C 
Sbjct: 96  DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEM----RERG--CG 149

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            + V Y  +I GLC+ G V++A      M+D  + PD  TY ++I G C +  SNEAK L
Sbjct: 150 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 209

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM    ++PNVV ++ ++D   + G  +EA ++++ M+  GV+PN   Y+ L+ G C 
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+++RA  L   M     + +  +Y+++I G+ ++   + A  L SEM + GI P V T
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ +  GL +  + E+A  L +EM   G+  + + Y   I G C+ G +  A E+F  + 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D+  Y+ LI GL K GR++ + + F  +    L+ +  TY+ +IH    +G ++
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            A  L   M   G+ P+ V +  L+    ++++  KV      M
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   ++  G  P++   + L+  L R     +   + E M+      G    PD  
Sbjct: 65  DAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV------GAGISPDVY 118

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+  CK    D AK++L++M+++    + VTYN +I G C +    EA     +M
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  T+  +++ LCK+ +  EA  LL+ M    ++PN  VY  L+DGF   G  
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +P  +TYN +
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +   Y+ LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++  
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F  M+ +G+ P+   ++ L+ G ++N +     +L+ RM
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 173/341 (50%), Gaps = 4/341 (1%)

Query: 68  DGLCKEGFVDKAKELLLQMKD----KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + L K+     A  LL ++++      I+PDV TY+++I  +C   + + AK++ +EM +
Sbjct: 86  NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 145

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G   N VT++V++  LC++G +EEA    + M   G+ P+ F Y  L++G C + R N 
Sbjct: 146 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK L   M     K NV  Y+ LI+G+ +    + A  +  EM++ G++P  +TY+ L  
Sbjct: 206 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL ++ Q++RA  L  +M R     DT  Y   I+G  ++    +A  L   +       
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++ +YS +I GLC+SG  + A +L   +    L  +   Y  +I   C +G +  A ++F
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M    V PD   +N+L+ G  +     +  +   +M ER
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 426



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 197/423 (46%), Gaps = 29/423 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+   F +++  G  PN  TYS LI+G  + G    A  L + M++         KP+ V
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG------LKPNDV 468

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +++   K   ++K       M D+ +  D   Y  +I     + +   A R+  E+
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI 528

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V  +S ++  LCK    E+A  +L+ M + GV PN   YN L+DG C +G +
Sbjct: 529 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 588

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +F S+ + G   N  +Y+ LI+G CK  +I  A  LY+EML+ GI P    Y+ L
Sbjct: 589 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 648

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E+A  L +EM   G A+ + ++   +DG CK G + E L+L   +     
Sbjct: 649 TTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGL 707

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--------------------RGVLIADVV 341
             +  +   +I GL ++G+L     +F  L                     +G +  DVV
Sbjct: 708 VPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV 767

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             + MI   C +G +DKA  L   + AK     C ++  ++    R  + S+ + LL  M
Sbjct: 768 --DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825

Query: 402 DER 404
           D+R
Sbjct: 826 DKR 828



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 165/345 (47%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +   ++D   K G V  A E++L M+D+ + P +   N++++    A+      ++   
Sbjct: 48  AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREF 107

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P+V T+S +++  CK  + + A ++L  M + G   N   YN L+ G C +G 
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A      ME  G   + F+Y  LING CK++    A +L  EM    +KP VV Y  
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G       + AFK+  EM   GV  +   Y   + GLCK G +  A  L + +    
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ +I+G  +    K A+ L   +    +  +V TY+IMIH LC  G+ +KA 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL  +M  KG+ P+   +  L+ G  R    S   E+  +M + N
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 90/245 (36%), Gaps = 93/245 (37%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  + A G  PN +TY++LI+G C+ G    A  L+ EM+           PDA +
Sbjct: 591 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML------ATGITPDAFV 644

Query: 63  YTTI----------------------------------IDGLCKEGFVDKAKELLLQMKD 88
           Y+ +                                  +DG CK G + +  +LL  +  
Sbjct: 645 YSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMG 704

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE-------------------MMDQGVQP- 128
           + + P+ +T  ++I G   A   +E   +F+E                   M++QG  P 
Sbjct: 705 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764

Query: 129 NVV---------------------------------TFSVIMDELCKNGKMEEASQLLEL 155
           +VV                                 ++  I+D LC+ GK+ EA  LL+ 
Sbjct: 765 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 824

Query: 156 MIQIG 160
           M + G
Sbjct: 825 MDKRG 829


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 225/433 (51%), Gaps = 30/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EAA +F  + A G +P++++Y TL++G    G     + LF  M               I
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G+V                PD V Y+T+I    + G +  A E   QM  + I 
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+   Y+S+I+GFC      +AK L  EM+++G+ +P++V F+ +++ LCK+G++ +A  
Sbjct: 508 PNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHD 567

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +L+  IG RP+   + +L+DG+CL G++++A ++  +ME +G + ++ +YS L++GY 
Sbjct: 568 IFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYF 627

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  I   L+L+ EM  KG+KP  VTY  +  GLF   +   A K F EM   G      
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    EA+ LF+ L  +  +  I   + +I+ + K  R + A ELF ++
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +  TY +MI  L  DG ++ A+++F  ME  G+ P     N ++   +   E 
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807

Query: 392 SKVVELLHRMDER 404
           +K    L ++D +
Sbjct: 808 AKAGNYLSKVDGK 820



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 211/393 (53%), Gaps = 9/393 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            C PNV+ Y+T+I+G  + G T  A +LF EM       GV  KPD V Y  IID LCK 
Sbjct: 260 ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ----GV--KPDVVTYNLIIDALCKA 313

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +DKA+ +L QM      PD VTYN +I G+       EA ++F +M  +G+ PN+V  
Sbjct: 314 RAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVIC 373

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +  +  LCK+G+ +EA+++ + M   G +P+   Y TL+ G+   G       LF SM+S
Sbjct: 374 NSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +   ++ILI+ Y K   ++ A+ +++EM  +G+ P VVTY+T+      + ++  
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD 493

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK--CELDIRSYSCL 311
           A + F++M   G+  +T  Y + I G C +G +V+A EL   + I K     DI  ++ +
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM-INKGIPRPDIVFFNSV 552

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+ LCK GR+  A ++F  +       DV+T+  +I   C  GKMDKA  +   ME  GV
Sbjct: 553 INSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGV 612

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             D V ++TL+ G  +N   +  + L   M  +
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 201/398 (50%), Gaps = 5/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PNV +YS ++ GLC    +  AL+LF+ M    G     C P+ V Y T
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGG----ACSPNVVAYNT 270

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  KEG   KA  L  +M  + + PDVVTYN +I   C A   ++A+ +  +M   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            QP+ VT++ ++      G+++EA+++   M   G+ PN  + N+ +   C  GR   A 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM + G K ++ SY  L++GY         + L++ M S GI      +N L    
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V+ A  +F EMQ+ GV+ D   Y T I    + G + +A+E F  +     + + 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             Y  +I G C  G L  A EL   +  +G+   D+V +N +I++LC DG++  AHD+F 
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +   G  PD + F +L+ G     +  K  ++L  M+
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAME 608



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 205/403 (50%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G +P+V+TY+ +I+ LC+      A  +  +M   NG      +PD V
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT-NG-----AQPDTV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G    G + +A ++  +MK + + P++V  NS +   C    S EA  +F  M
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P++V++  ++      G   +   L   M   G+  +  V+N L+  +   G V
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  M+  G   +V +YS +I+ + +   +  A+  +++M+++GI+P    Y+++
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM   G+   D   + + I+ LCK+G +++A ++F  +  + 
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +++ LIDG C  G++  A+++  ++    +  D+VTY+ ++     +G+++   
Sbjct: 577 ERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGL 636

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M+ KGV P+ V +  ++ G  R   T    +  H M E
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 38/348 (10%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA-SQLL 153
           V TY+ ++   C A   +    LF  ++  G++ + +T S ++  LC   + EEA + LL
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILINGYC 211
             M ++G  PN F Y+ ++ G C      RA +LF  M   G  C  NV +Y+ +I+G+ 
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K  E   A SL+ EM  +G+KP VVTYN +   L +   +++A  +  +M  +G   DT 
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 272 AY-----------------------------------RTFIDGLCKNGYIVEALELFRTL 296
            Y                                    +F+  LCK+G   EA E+F ++
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + DI SY  L+ G    G       LF+S+    + AD   +NI+IHA    G +
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D A  +F +M+ +GV+PD V ++T++    R    +  +E  ++M  R
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F  +   G  P+VIT+++LI+G C  G    A  + + M     E  V  + D 
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM-----EV-VGVETDI 616

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++DG  K G ++    L  +M+ K + P+ VTY  ++ G   A  +  A++ F E
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G    V  + +I+  LC+N   +EA  L + +  + V+ +  + NT+++      R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AKELF ++ + G   N  +Y ++I    K+  +E A +++S M   GI P     N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 797 IIRMLLEKGEIAKA 810



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 55/204 (26%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEALELFRTL-------RI 298
           A  +FDE+ R        +   F+  L        C       AL LF  +       R+
Sbjct: 93  AHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRV 152

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELF----------HSLPRGVL------------ 336
           +   L + +YS L+D  C++ R  +   LF          H +    L            
Sbjct: 153 V--PLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210

Query: 337 --------------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA--PDCVAFNT 380
                         + +V +Y+I++  LC +    +A DLF  M  +G A  P+ VA+NT
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  +  ET K   L H M  +
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQ 294


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 219/427 (51%), Gaps = 41/427 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++  G  PNV  Y+ LI GLCR      A  +F+EM N N    +V       Y T+IDG
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV------TYNTLIDG 255

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            CK G +D A ++  +MK+K++ P+++T+NS++ G C      EA+ L  EM   G  P+
Sbjct: 256 YCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315

Query: 130 VVTFSVIMDEL-----------------------------------CKNGKMEEASQLLE 154
             T+S++ D L                                   CK GK+E+A ++L+
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
              + G+  +  +YNT ++G+C  G +N+A      MES G + N  +++ LI+ +C  K
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E++ A     +M  KG+ P+V TYNTL  G  ++   +R F++ ++M+  GV  +  +Y 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + I+ LCK+G I+EA  + R +       + + Y+ LIDG C  G++K A   F  + R 
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            +   +VTYN++I  LC  GK+ +A D    + + G +PD + +N+L+ G       SK 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 395 VELLHRM 401
           + L   M
Sbjct: 616 LGLYETM 622



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 226/439 (51%), Gaps = 44/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  +++  G  P+  TYS L +GL R      A+ L+E+      E G+  + +  
Sbjct: 299 EARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT----EKGI--RINNY 352

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G V+KA+E+L +  +  +  D V YN+ + G+C   D N+A  L IE 
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI-LTIER 411

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++PN +TF+ ++D+ C   +M++A + ++ M + GV P+   YNTL+DG+     
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +R  ++   ME +G K NV SY  LIN  CK+ +I  A  +  +M+ +G+ P    YN 
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA----------- 289
           L  G   + +V+ A + FDEM R  ++     Y   IDGLCK G + EA           
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591

Query: 290 ------------------------LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                                   L L+ T++ L  +  +R+Y  LI G  K G +++  
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVE 650

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L++ + +  L+ D V YN MIH     G   KA+ L   M  +G+ PD + +N+L+LG 
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710

Query: 386 IRNNETSKVVELLHRMDER 404
            R  + S + +L++ M  +
Sbjct: 711 FREGKLSNIKDLVNNMKAK 729



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 7/370 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+   G  P+V TY+TLI+G  +         + E+M     E GV  KP+ V
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM----EEIGV--KPNVV 492

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+ LCK+G + +A+ +L  M  + + P+   YN +I G C      +A R F EM
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + P +VT++V++D LCK GK+ EA   L  +   G  P+   YN+L+ G+   G V
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++   L+ +M+++G K  V +Y  LI+G C  + IE    LY+EML   + P  V YN +
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAM 671

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                EI   ++A+ L   M   G+  D   Y + I G  + G +    +L   ++  + 
Sbjct: 672 IHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL 731

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +Y  L+ G C       A+  +  +     + +    N +   L  +G++ +   
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791

Query: 362 LFLDMEAKGV 371
           +  +M  KG+
Sbjct: 792 ICSEMNVKGI 801



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 194/417 (46%), Gaps = 40/417 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K    G   + + Y+T +NG CR G    A+   E M      FG+  +P+++
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM----ESFGL--RPNSI 422

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++ID  C    +DKA+E + +M +K + P V TYN++I G+      +   ++  +M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+PNVV++  +++ LCK+GK+ EA  +L  MI  GV PNA VYN L+DG C+ G+V
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A   F  M        + +Y++LI+G CK  ++  A    +++ S G  P V+TYN+L
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602

Query: 242 F------------IGLFEIHQ----------------------VERAFKLFDEMQRHGVA 267
                        +GL+E  +                      +E   KL++EM +  + 
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLL 662

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D   Y   I    + G   +A  L + +       D  +Y+ LI G  + G+L    +L
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +++    L     TY+I++   C       A+  + +M      P+    N L  G
Sbjct: 723 VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAG 779



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 153/290 (52%), Gaps = 4/290 (1%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF+E+ + G + +   ++  +    K   ++   + L+ M + GVRPN F+YN L+ G C
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              R+  A+++F  M ++    ++ +Y+ LI+GYCK  E++ A  +   M  K + P ++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL--CKNGYIVEALELFR 294
           T+N+L  GL ++ +++ A  L  EM+ +G   D + Y    DGL  C +G    A+EL+ 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAMELYE 340

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
                   ++  + S L++GLCK G+++ A E+        L+AD V YN  ++  C  G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M+KA      ME+ G+ P+ + FN+L+       E  K  E + +M E+
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEK 450



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 156/326 (47%)

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           K  +L +++++     D   Y   I+      +          M  +GV+PNV  ++V++
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC+  ++ +A ++ + M  I +  +   YNTL+DG+C  G ++ A ++   M+     
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N+ +++ L++G CK ++++ A SL  EM   G  P   TY+ LF GL        A +L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           +++    G+  + +     ++GLCK G + +A E+ +         D   Y+  ++G C+
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G +  A      +    L  + +T+N +I   C   +MDKA +    M  KGV P    
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDE 403
           +NTL+ G  +     +  ++L +M+E
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEE 484



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 7/288 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G  PN   Y+ LI+G C  G    AL  F+EM+           P  
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE------ISPTL 561

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDGLCK+G + +A++ L Q+     +PDV+TYNS+I G+  A + ++   L+  
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYET 621

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G++P V T+  ++    K G +E   +L   M+Q+ + P+  VYN ++  +   G 
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A  L   M   G   +  +Y+ LI G+ +  ++     L + M +K + P   TY+ 
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           L  G  ++     A+  + EM  +    +         GL + G + E
Sbjct: 741 LVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQE 788



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%)

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +  +  A EL+  M   G   ++ S S+L +     K+    + L+ E+ + G +   
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             Y        ++  ++   +  D M++ GV  + + Y   I GLC+   I +A ++F  
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +     I +Y+ LIDG CK G L  A+++   +    +  +++T+N ++  LC   K
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M +A  L  +ME  G  PD   ++ L  G +R ++ +  +EL  +  E+
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFS-------------YSILINGYCKNKEIE 217
           L+   C     + AK L ++  +     ++FS               +L++  CK+K + 
Sbjct: 64  LLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKMLR 123

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ LY  M   G  P++V+ + LF  L    Q  +   LF E++  G   DT+ Y   I
Sbjct: 124 EAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAI 183

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
               K   +   +E   ++R      ++  Y+ LI GLC+  R++ A ++F  +    L+
Sbjct: 184 QAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLV 243

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             +VTYN +I   C  G++D A  +   M+ K VAP+ + FN+L+ G  +  +  +   L
Sbjct: 244 GSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSL 303

Query: 398 LHRMD 402
           L  M+
Sbjct: 304 LKEME 308



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 66/155 (42%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +  A +L++ M+R G      +       L      V+ ++LF  +       D   Y+ 
Sbjct: 122 LREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAK 181

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
            I    K   LK+  E   S+ +  +  +V  YN++I  LC + ++  A  +F +M    
Sbjct: 182 AIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNIN 241

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +    V +NTL+ G  +  E     ++  RM E++
Sbjct: 242 LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 208/380 (54%), Gaps = 6/380 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F +++  GC PNV+TY+T+I+G C+   T  A      M    G  G+  +P+ + +  
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSM----GLKGL--EPNLITFNM 58

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           II+GLC++G + +  E+L++M  K   PD VTYN+++ G+C   + ++A  L  EM+  G
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNVVT++ +++ +CK G +  A +  + M   G+ PN   Y T+++GF   G ++ A 
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   M   G   ++ +Y+ LING+C    +E A+ L  +M+ KG+ P VV+Y+T+  G 
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               +++RAF++  EM    V  D   Y + I GLC+   + EA ++F+ +  +K   D 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI+  CK G L  A  L   + +   + D VTYN++I+ L    +  +A  L L 
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 366 MEAKGVAPDCVAFNTLMLGC 385
           +      P  V +NTL+  C
Sbjct: 359 LFYDDSIPSAVTYNTLIENC 378



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 202/415 (48%), Gaps = 21/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      +   G EPN+IT++ +INGLCR G       +  EM       G V  PD V
Sbjct: 36  EAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEM----SRKGYV--PDEV 89

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++G CKEG   +A  L  +M    ++P+VVTY S+I   C A + N A   F +M
Sbjct: 90  TYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM 149

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN  T++ I++   + G ++EA ++L  M + G  P+   YN L++G C+ GR+
Sbjct: 150 HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRM 209

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   +V SYS +I+G+ +N+E++ A  +  EM+ K + P  VTY++L
Sbjct: 210 EEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSL 269

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  ++  A  +F EM    +  D + Y T I+  CK G + +AL L   +     
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH------------- 348
             D  +Y+ LI+GL K  R K A  L   L     I   VTYN +I              
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVAL 389

Query: 349 --ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               C  G MD+A  +F  M  K   P+   +N ++ G  R     K  +L   M
Sbjct: 390 VKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM 444



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           + L  F+EM   NG     C P+ V Y T+IDG CK    D+A   L  M  K + P+++
Sbjct: 1   MGLRFFKEM-ERNG-----CLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLI 54

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           T+N +I G C      E   + +EM  +G  P+ VT++ +++  CK G   +A  L   M
Sbjct: 55  TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ G+ PN   Y +L++  C  G +NRA E F  M   G   N  +Y+ +ING+ +   +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  + +EM   G  P++VTYN L  G   + ++E A  L  +M   GV  D  +Y T 
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I G  +N  +  A ++   +       D  +YS LI GLC+  RL  A ++F  +    L
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D  TY  +I+A C +G ++KA  L  +M  KG  PD V +N L+ G  +   + +   
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 397 LLHRM 401
           LL ++
Sbjct: 355 LLLKL 359



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 189/377 (50%), Gaps = 28/377 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  L  ++   G  PNV+TY++LIN +C+ G+   A+  F++M + G      +C P+ 
Sbjct: 106 QALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG------LC-PNE 158

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTTII+G  ++G +D+A  +L +M      P +VTYN++I G C      EA  L  +
Sbjct: 159 RTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQD 218

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VV++S I+    +N +++ A Q+   MI   V P+A  Y++L+ G C   R
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++F  M ++    + F+Y+ LIN YCK  ++  AL L+ EM+ KG  P  VTYN 
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  + + A +L  ++           Y T I+  C                   
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN------------------ 380

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             ++ +S   L+ G C  G +  A ++F S+       +   YN++IH  C  G + KA+
Sbjct: 381 --IEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438

Query: 361 DLFLDMEAKGVAPDCVA 377
            L+ +M      P  V 
Sbjct: 439 KLYKEMVHVDFVPHTVT 455



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 169/312 (54%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VVTYN++I G+C    ++EA      M  +G++PN++TF++I++ LC++G+++E S++
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G  P+   YNTL++G+C  G  ++A  L   M   G   NV +Y+ LIN  CK
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A+  + +M  +G+ P   TY T+  G  +   ++ A+++ +EM R G       
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G C  G + EA+ L + +       D+ SYS +I G  ++  L  A+++   + 
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              ++ D VTY+ +I  LC   ++ +A D+F +M    + PD   + TL+    +  + +
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLN 315

Query: 393 KVVELLHRMDER 404
           K + L   M ++
Sbjct: 316 KALHLHDEMIQK 327



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 21/260 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G  P+V++YST+I+G  R      A  +  EMI      G    PDAV
Sbjct: 211 EAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI------GKSVLPDAV 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GLC++  + +A ++  +M    + PD  TY ++I  +C   D N+A  L  EM
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
           + +G  P+ VT++V+++ L K  + +EA +LL  +      P+A  YNTL++        
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384

Query: 174 -------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G ++ A ++F SM +   K N   Y+++I+G+C+   +  A  LY EM
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM 444

Query: 227 LSKGIKPTVVTYNTLFIGLF 246
           +     P  VT   L   LF
Sbjct: 445 VHVDFVPHTVTVLALVKALF 464



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 23/252 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++      P+  TY+TLIN  C+ G    AL+L +EMI    + G +  PDAV
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMI----QKGFL--PDAV 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI---------------RGFC 106
            Y  +I+GL K+    +A+ LLL++   +  P  VTYN++I               +GFC
Sbjct: 335 TYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFC 394

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
                +EA ++F  M+++  +PN   ++VI+   C+ G + +A +L + M+ +   P+  
Sbjct: 395 MKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTV 454

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS-ILINGYCKNKEIEGALSLYSE 225
               L+      G      E+   +    CK      S +L+    K   ++   +L +E
Sbjct: 455 TVLALVKALFTEGMDGELNEVIGDILR-SCKLTDAELSKVLVEINQKEGNMDMVFNLLTE 513

Query: 226 MLSKGIKPTVVT 237
           M   G+ P+  T
Sbjct: 514 MAKDGLIPSTGT 525



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 78/151 (51%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             + F EM+R+G   +   Y T IDG CK     EA    R++ +   E ++ +++ +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC+ GRLK   E+   + R   + D VTYN +++  C +G   +A  L  +M   G++P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + V + +L+    +    ++ +E   +M  R
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVR 152


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 219/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G  PN ITY+T+I+G  + G       L ++M++         KP+ V
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP------KPNIV 265

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+ G +D+ + L+ +M   ++ PD  TY+ +  G     +S     LF E 
Sbjct: 266 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV     T S++++ LCK+GK+ +A Q+LE+++  G+ P   +YNTL++G+C    +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M+S   + +  +Y+ LING CK + +  A  L  EM   G+ P+V T+NTL
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   Q+E+ F +  +MQ+ G+ +D  ++ + +   CKNG I EA+ +   +     
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + + Y+ +ID   +SG  + A+ L   +    + A +VTYN+++  LC   ++D+A +
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   +  +G+ PD V++NT++  C    +T K +ELL  M++
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 607



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++ +    P+  TYS L +GL RTG +   L+LF E +      G      A 
Sbjct: 282 ETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG------AY 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G V KA+++L  +    + P  V YN++I G+C   D   A  +F +M
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +T++ +++ LCK   + +A  L+  M + GV P+   +NTL+D +   G++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +   M+  G K +V S+  ++  +CKN +I  A+++  +M+ K + P    YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E    E+AF L ++M+  GV+A    Y   + GLC++  I EA EL  TLR    
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ +I   C  G    A EL   + +  +   + TY+ ++ AL + G++     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 635

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+  M  K V P    +  ++   +R    SKV  L   M E+
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 198/397 (49%), Gaps = 4/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  L A G  P+   ++ ++      G   VAL +   M    G       PDA  Y 
Sbjct: 143 AAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEG----APPPDAFSYN 198

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I GL + G    A ++  +M D  + P+ +TYN++I G     D     RL  +M+  
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHD 258

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PN+VT++V++  LC+ G+M+E   L++ M    + P+ F Y+ L DG   TG     
Sbjct: 259 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 318

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF      G     ++ SIL+NG CK+ ++  A  +   ++  G+ PT V YNTL  G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             ++  +  AF +F++M+   +  D   Y   I+GLCK   + +A +L   +     +  
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++ LID    +G+L+  + +   + +  + +DV+++  ++ A C +GK+ +A  +  
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           DM  K VAP+   +N+++   I + +T +   L+ +M
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 29/293 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------INGNG 50
           +F ++K+    P+ ITY+ LINGLC+      A +L  EM               I+  G
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 51  EFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
             G +               K D + + +++   CK G + +A  +L  M  K++ P+  
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YNS+I  +  + D+ +A  L  +M + GV  ++VT+++++  LC++ +++EA +L+  +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+RP+   YNT++   C  G  ++A EL   M   G +  + +Y  L++       +
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                LY +ML K ++P+   Y  +           +   L  EM   G+A D
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 4/260 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++ + +++++ L   G+  +      L++  G RP+ F +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 188 FVSM-ESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
              M  S G    + FSY+++I G  ++ +   AL ++ EM+  G+ P  +TYNT+  G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E  F+L D+M   G   +   Y   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 306 RSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +YS L DGL ++G  +    LF  SL +GV++    T +I+++ LC DGK+ KA  +  
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG-AYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            +   G+ P  V +NTL+ G
Sbjct: 359 MLVHTGLVPTTVIYNTLING 378


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 216/429 (50%), Gaps = 29/429 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-------------- 47
           EA  L   L +FGCEP+V++Y+ ++ GLC          L EEM+               
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 48  ----GNGEFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                NG F  V           C PD  +Y TIIDG+CKEG ++ A E+L +M    + 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VV YN++++G C A    E + L  EM D+    + VTF++++D  C+NG ++   +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M++ G  P+   Y T+++GFC  G ++ A  L  SM + GCK N  SY+I++ G C 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +    A  L S+M+ +G     +T+NTL   L +   VE+A +L  +M  +G + D  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T IDGL K G   EALEL   +       +   YS +   L + GR+    ++F ++ 
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              + +D V YN +I +LC  G+ ++A +    M + G  P+   +  L+ G        
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629

Query: 393 KVVELLHRM 401
           +  E+L  +
Sbjct: 630 EAQEMLTEL 638



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++   GC P    Y  ++   CR G    A+ + E++ +  G     C  D  
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARG-----CALDVG 193

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C +G VD+A  LL  +      PDVV+YN+V++G C A      + L  EM
Sbjct: 194 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M++ G  P+  +Y T++DG C  G +
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 313

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K      VT+N L
Sbjct: 314 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M   G   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A +
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 284 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA----HEILNRMPSYGL--KPNVVCYNT 337

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC     ++ +ELL +M DK+   D VT+N ++  FC     +    L  +M+++G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C   R   A+
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + + A +L + M   G++ +T  Y +    L + G I + +++F  ++      D 
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 577

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK G  + A E    +     + +  TY I+I  L ++G + +A ++  +
Sbjct: 578 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637

Query: 366 MEAKG 370
           + +KG
Sbjct: 638 LCSKG 642



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 206/434 (47%), Gaps = 41/434 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   L A GC  +V   + ++N +C  G    AL+L  ++ +    FG  C+PD V 
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS----FG--CEPDVVS 229

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLC        +EL+ +M      P++VT+N++I   C          +  +M+
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 289

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-------- 174
           + G  P++  ++ I+D +CK G +E A ++L  M   G++PN   YNTL+ G        
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 349

Query: 175 ---------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                                      FC  G V+R  EL   M   GC  +V +Y+ +I
Sbjct: 350 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVI 409

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+CK   I+ A+ L   M + G KP  ++Y  +  GL    +   A  L  +M + G  
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 469

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   + T I+ LCK G + +A+EL + + +  C  D+ SYS +IDGL K+G+   A EL
Sbjct: 470 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 529

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            + +    +  + + Y+ +  AL  +G+++K   +F +++   +  D V +N ++    +
Sbjct: 530 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 589

Query: 388 NNETSKVVELLHRM 401
             ET + +E L  M
Sbjct: 590 RGETERAIEFLAYM 603



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 156/307 (50%), Gaps = 3/307 (0%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN+++ G+C A     A+RL   +    V PN  T+  ++  LC  G++ +A  +L+ M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G  P   +Y+ +++  C  G    A  +   + + GC  +V + ++++N  C    ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L  ++ S G +P VV+YN +  GL    +     +L +EM R     +   + T I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC+NG      E+   +    C  DIR Y+ +IDG+CK G L++A E+ + +P   L 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +VV YN ++  LC+  + ++  +L  +M  K    D V FN L+    +N    +V+EL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 398 LHRMDER 404
           L +M ER
Sbjct: 390 LEQMLER 396



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC  N IT++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 506

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  D+A ELL  M +K ++P+ + Y+S+          N+  ++F 
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK G+ E A + L  M+  G  PN   Y  L+ G    G
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 627 FVKEAQEMLTELCSKGALRKHLMKHFGIV 655



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++   C+ G++E A +L      + V PNA+ Y  ++   C  GR+  A  +   M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC      Y +++   C+      A+ +  ++ ++G    V   N +   + +   V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   G   D  +Y   + GLC         EL   +  + C  +I +++ LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             LC++G  +   E+   +       D+  Y  +I  +C +G ++ AH++   M + G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           P+ V +NTL+ G        +  ELL  M +++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 217/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G  PN ITY+T+I+G  + G       L ++M++         KP+ V
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP------KPNVV 265

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+ G +D+ + L+ +M   ++ PD  TY+ +  G     +S     LF E 
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV     T S++++ LCK+GK+ +A Q+ E+++  G+ P   +YNTL++G+C    +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M+S   + +  +Y+ LING CK + +  A  L  EM   G+ P+V T+NTL
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   Q+E+ F +  +MQ+ G+ +D  ++ + +   CKNG I EA+ +   +     
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + + Y+ +ID   +SG  + A  L   +    + A +VTYN+++  LC   ++D+A +
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   +  +G+ PD V++NT++  C    +T K +ELL  M++
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 607



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  AL  ++ +    P+  TYS L +GL RTG +   L+LF E +      G      A 
Sbjct: 282 ETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG------AY 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G V KAK++   +    + P  V YN++I G+C   D   A  +F +M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +T++ +++ LCK   + +A  L+  M + GV P+   +NTL+D +   G++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +   M+  G K +V S+  ++  +CKN +I  A+++  +M+ K + P    YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E    E+A  L ++M+  GV+A    Y   + GLC++  I EA EL  TLR    
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ +I   C  G    A EL   + +  +   + T + ++ AL + G++     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+  M  K V P    +  ++   +R    SKV  L   M E+
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 4/260 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++ + +++++ L   G+  +      L++  G RP+ F +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 188 FVSM-ESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
              M  S G    + FSY+++I G  ++ +   AL ++ EM+  G+ P  +TYNT+  G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E  F+L D+M   G   +   Y   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 306 RSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +YS L DGL ++G  +    LF  SL +GV++    T +I+++ LC DGK+ KA  +F 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG-AYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            +   G+ P  V +NTL+ G
Sbjct: 359 MLVHTGLVPTTVIYNTLING 378



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 29/293 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------INGNG 50
           +F ++K+    P+ ITY+ LINGLC+      A +L  EM               I+  G
Sbjct: 391 IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYG 450

Query: 51  EFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
             G +               K D + + +++   CK G + +A  +L  M  K++ P+  
Sbjct: 451 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 510

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YNS+I  +  + D+ +A  L  +M + GV  ++VT+++++  LC++ +++EA +L+  +
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+RP+   YNT++   C  G  ++A EL   M   G +  + +   L++       +
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRV 630

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                LY +ML K ++P+   Y  +           +   L  EM   G+A D
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 210/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++     +PNV+ Y+ LI+G  R G+   A  + +EM+          +P+ +
Sbjct: 310 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG------VQPNKI 363

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCK G +D+A  LL QM   +  PD +TYN +I G    +   +A RL  EM
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV T+S+++  LC++G+ E+AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483

Query: 178 -------------------------------TGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP  V Y  L    F+   +E+    F  M   GV
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  YS LI GLCK+   + A+ 
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   + +  +  ++V YN +I  LC  G +  A ++F  + AKG+ P+CV + +L+ G  
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723

Query: 387 RNNETSKVVELLHRM 401
           +  + S    L + M
Sbjct: 724 KVGDISNAFYLYNEM 738



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 41/437 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +++  GC  N +TY+ LI GLCR+G    A    ++M     ++G+V  PD   
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM----EDYGLV--PDGFT 294

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+GLCK    ++AK LL +M    + P+VV Y ++I GF    +++EA ++  EM+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GVQPN +T+  ++  LCK G+M+ AS LL+ M++   RP+   YN +++G        
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   ME+ G   NV++YSI+I+G C++ E E A  L  EM +KG+KP    Y  L 
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G      V  A ++FD+M +  V  D + Y + I GL K G + E+ + F  ++     
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIADVV--------------- 341
            +  +YS LI G  K+G L+ A +L   +      P  V+  D++               
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594

Query: 342 --------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
                          Y I+IH L + G M+ A  +   +E  G  PD   +++L+ G  +
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 388 NNETSKVVELLHRMDER 404
             +  K   +L  M ++
Sbjct: 655 TADREKAFGILDEMSKK 671



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 180/339 (53%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + + ++  CK    D AK++L++M+++    + VTYN +I G C +    EA     +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G+ P+  T+  +++ LCK+ +  EA  LL+ M    ++PN  VY  L+DGF   G  +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +P  +TYN + 
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     +
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M+ +G+ P+   ++ L+ G ++N +     +L+ RM
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 214/493 (43%), Gaps = 99/493 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L  ++   G +PN   Y+ LI+G CR G+  +A  +F++M   N        PD  
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN------VLPDLY 503

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            Y ++I GL K G V+++ +   QM+++ + P+  TY+ +I G+    D   A++L    
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563

Query: 118 -------------------------------FIEMMDQGVQ------------------- 127
                                          F  M+DQGV                    
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623

Query: 128 ----------------PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
                           P+V  +S ++  LCK    E+A  +L+ M + GV PN   YN L
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 683

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C +G ++ A+ +F S+ + G   N  +Y+ LI+G CK  +I  A  LY+EML+ GI
Sbjct: 684 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P    Y+ L  G      +E+A  L +EM   G A+ + ++   +DG CK G + E L+
Sbjct: 744 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLK 802

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP------------------- 332
           L   +       +  +   +I GL ++G+L     +F  L                    
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862

Query: 333 -RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            +G +  DVV  + MI   C +G +DKA  L   + AK     C ++  ++    R  + 
Sbjct: 863 NQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 920

Query: 392 SKVVELLHRMDER 404
           S+ + LL  MD+R
Sbjct: 921 SEALNLLKEMDKR 933



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 154/307 (50%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           + S +  +C   + + AK++ +EM ++G   N VT++V++  LC++G +EEA    + M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+ P+ F Y  L++G C + R N AK L   M     K NV  Y+ LI+G+ +    +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  EM++ G++P  +TY+ L  GL ++ Q++RA  L  +M R     DT  Y   I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +G  ++    +A  L   +       ++ +YS +I GLC+SG  + A +L   +    L 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +   Y  +I   C +G +  A ++F  M    V PD   +N+L+ G  +     +  + 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 398 LHRMDER 404
             +M ER
Sbjct: 525 FAQMQER 531



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 126/269 (46%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  CK  + + A ++L  M + G   N   YN L+ G C +G V  A      ME  G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             + F+Y  LING CK++    A +L  EM    +KP VV Y  L  G       + AFK
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM   GV  +   Y   + GLCK G +  A  L + +       D  +Y+ +I+G  
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +    K A+ L   +    +  +V TY+IMIH LC  G+ +KA DL  +M  KG+ P+  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  L+ G  R    S   E+  +M + N
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVN 497



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 90/245 (36%), Gaps = 93/245 (37%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  + A G  PN +TY++LI+G C+ G    A  L+ EM+           PDA +
Sbjct: 696 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML------ATGITPDAFV 749

Query: 63  YTTI----------------------------------IDGLCKEGFVDKAKELLLQMKD 88
           Y+ +                                  +DG CK G + +  +LL  +  
Sbjct: 750 YSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMG 809

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE-------------------MMDQGVQP- 128
           + + P+ +T  ++I G   A   +E   +F+E                   M++QG  P 
Sbjct: 810 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869

Query: 129 NVV---------------------------------TFSVIMDELCKNGKMEEASQLLEL 155
           +VV                                 ++  I+D LC+ GK+ EA  LL+ 
Sbjct: 870 DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 929

Query: 156 MIQIG 160
           M + G
Sbjct: 930 MDKRG 934


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 212/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++     +PNV+ Y+ LI+G  R G+   A  + +EM+      GV  +P+ +
Sbjct: 332 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA----GV--QPNKI 385

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCK G +D+A  LL QM   +  PD +TYN +I G    +   +A RL  EM
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV T+S+++  LC++G+ E+AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 178 -------------------------------TGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP  V Y  L    F+   +E+    F  M   GV
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  YS LI GLCK+   + A+ 
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   + +  +  ++V YN +I  LC  G +  A ++F  + AKG+ P+CV + +L+ G  
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 387 RNNETSKVVELLHRM 401
           +  + S    L + M
Sbjct: 746 KVGDISNAFYLYNEM 760



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 207/404 (51%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAF----GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           +A AL  K++ F    G  P+V TYSTLI   C+      A  +  EM     E G  C 
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEM----RERG--CG 276

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            + V Y  +I GLC+ G V++A      M+D  + PD  TY ++I G C +  SNEAK L
Sbjct: 277 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 336

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM    ++PNVV ++ ++D   + G  +EA ++++ M+  GV+PN   Y+ L+ G C 
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+++RA  L   M     + +  +Y+++I G+ ++   + A  L SEM + GI P V T
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ +  GL +  + E+A  L +EM   G+  + + Y   I G C+ G +  A E+F  + 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D+  Y+ LI GL K GR++ + + F  +    L+ +  TY+ +IH    +G ++
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            A  L   M   G+ P+ V +  L+    ++++  KV      M
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   ++  G  P++   + L+  L R     +   + E M+      G    PD  
Sbjct: 192 DAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV------GAGISPDVY 245

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+  CK    D AK++L++M+++    + VTYN +I G C +    EA     +M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  T+  +++ LCK+ +  EA  LL+ M    ++PN  VY  L+DGF   G  
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +P  +TYN +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +   Y+ LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++  
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F  M+ +G+ P+   ++ L+ G ++N +     +L+ RM
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M    I+PDV TY+++I  +C   + + AK++ +EM ++G   N VT++V++  LC++G 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +EEA    + M   G+ P+ F Y  L++G C + R N AK L   M     K NV  Y+ 
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G+ +    + A  +  EM++ G++P  +TY+ L  GL ++ Q++RA  L  +M R  
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              DT  Y   I+G  ++    +A  L   +       ++ +YS +I GLC+SG  + A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   +    L  +   Y  +I   C +G +  A ++F  M    V PD   +N+L+ G 
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 386 IRNNETSKVVELLHRMDER 404
            +     +  +   +M ER
Sbjct: 535 SKVGRVEESTKYFAQMQER 553



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 165/345 (47%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +   ++D   K G V  A E++L M+D+ + P +   N++++    A+      ++   
Sbjct: 175 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREF 234

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P+V T+S +++  CK  + + A ++L  M + G   N   YN L+ G C +G 
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A      ME  G   + F+Y  LING CK++    A +L  EM    +KP VV Y  
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G       + AFK+  EM   GV  +   Y   + GLCK G +  A  L + +    
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ +I+G  +    K A+ L   +    +  +V TY+IMIH LC  G+ +KA 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL  +M  KG+ P+   +  L+ G  R    S   E+  +M + N
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 214/493 (43%), Gaps = 99/493 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L  ++   G +PN   Y+ LI+G CR G+  +A  +F++M   N        PD  
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN------VLPDLY 525

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            Y ++I GL K G V+++ +   QM+++ + P+  TY+ +I G+    D   A++L    
Sbjct: 526 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585

Query: 118 -------------------------------FIEMMDQGVQ------------------- 127
                                          F  M+DQGV                    
Sbjct: 586 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645

Query: 128 ----------------PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
                           P+V  +S ++  LCK    E+A  +L+ M + GV PN   YN L
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C +G ++ A+ +F S+ + G   N  +Y+ LI+G CK  +I  A  LY+EML+ GI
Sbjct: 706 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P    Y+ L  G      +E+A  L +EM   G A+ + ++   +DG CK G + E L+
Sbjct: 766 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLK 824

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP------------------- 332
           L   +       +  +   +I GL ++G+L     +F  L                    
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 333 -RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            +G +  DVV  + MI   C +G +DKA  L   + AK     C ++  ++    R  + 
Sbjct: 885 NQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 942

Query: 392 SKVVELLHRMDER 404
           S+ + LL  MD+R
Sbjct: 943 SEALNLLKEMDKR 955



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 60/286 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   G +PN++ Y+ LI+GLC++G    A N+F  ++      G+V  P+ V
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK----GLV--PNCV 735

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDG CK G +  A  L  +M    I PD   Y+ +  G   A D  +A  L  EM
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G   ++ +F+ ++D  CK GKM+E  +LL +++  G+ PNA     ++ G    G++
Sbjct: 796 FLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854

Query: 182 NRA-------------------KELFVSMESMG--------------CKHNVF------- 201
           +                       LF+ M + G              CK           
Sbjct: 855 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 914

Query: 202 -------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                        SY  +++  C+  ++  AL+L  EM  +GI P+
Sbjct: 915 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 26/163 (15%)

Query: 14  GCEPNVITYSTLINGLCRTG-----HTIVA--------------LNLFEEMINGNGEFGV 54
           G  PN +T   +I+GL   G     HTI                 +LF +MIN  G+   
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN-QGKI-- 889

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
              P  V+   I D  CKEG +DKA  L   +  K+      +Y +++   C     +EA
Sbjct: 890 ---PLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 945

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
             L  EM  +G+ P+     +++  L  +G ++E + +L+ M+
Sbjct: 946 LNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  230 bits (587), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 214/395 (54%), Gaps = 6/395 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           +T++ + G EP+V+T++T+I+ LCR      A+ + EEM + +        PD   +TT+
Sbjct: 184 YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD------VAPDETTFTTL 237

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ++G  +EG ++ A  L  +M +   +P  VT N +I G+C      +A     + +  G 
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGF 297

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +P+ VTFS  ++ LC+NG ++ A ++L LM+Q G  P+ + Y+T+++  C  G +  AK 
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +   M   GC  +  +++ LI   C   ++E AL L  E+  KG+ P V T+N L   L 
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALC 417

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++     A +LF+EM+  G   D   Y   ID LC +G + +AL+L + + +  C     
Sbjct: 418 KVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC   ++D A +L   M
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++G+ P+ V +N+++    +    SK  ++L  M
Sbjct: 538 ISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 198/376 (52%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ +T+ST +NGLC+ GH   AL +   M+         C+PD   Y+T+I+ LC
Sbjct: 294 ADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG------CEPDVYTYSTVINCLC 347

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
             G +++AK ++ QM D    PD  T+N++I   C  N   EA  L  E+  +G+ PNV 
Sbjct: 348 NNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVY 407

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G    A +L E M   G  P+   YN L+D  C +G++ +A +L   M
Sbjct: 408 TFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM 467

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E  GC  +  +Y+ +I+G CK + IE A  ++ +M   GI    +T+NTL  GL    ++
Sbjct: 468 EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERI 527

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A +L D+M   G+  +   Y + +   CK G I +A ++ +T+     E+D+ +Y+ L
Sbjct: 528 DDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATL 587

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+ R + A +L   +    +      YN +I +L        A  LF +M   G 
Sbjct: 588 INGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGG 647

Query: 372 APDCVAFNTLMLGCIR 387
            PD   +  +  G  R
Sbjct: 648 PPDAFTYKIVFRGLCR 663



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 203/404 (50%), Gaps = 7/404 (1%)

Query: 1   MEAA-ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +EAA  L  ++   GC P  +T + LING C+ G    AL   ++ I    E      PD
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFE------PD 300

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V ++T ++GLC+ G VD A ++L  M  +   PDV TY++VI   C   +  EAK +  
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVN 360

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+D G  P+  TF+ ++  LC   ++EEA  L   +   G+ PN + +N L++  C  G
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVG 420

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
             + A  LF  M+S GC  +  +Y+ILI+  C + ++  AL L  EM   G   + VTYN
Sbjct: 421 DPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYN 480

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T+  GL +  ++E A ++FD+M   G+  +   + T IDGLC    I +A EL   +   
Sbjct: 481 TIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISE 540

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +  +Y+ ++   CK G +  A ++  ++       DVVTY  +I+ LC   +   A
Sbjct: 541 GLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAA 600

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             L   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 601 LKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 194/374 (51%), Gaps = 7/374 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GCEP+V TYST+IN LC  G    A  +  +M++        C PD   + T+I  LC E
Sbjct: 331 GCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG------CLPDTTTFNTLIVALCTE 384

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +++A +L  ++  K ++P+V T+N +I   C   D + A RLF EM   G  P+ VT+
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTY 444

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++D LC +GK+ +A  LL+ M   G   +   YNT++DG C   R+  A+E+F  M+ 
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G C  + I+ A  L  +M+S+G++P  VTYN++     +   + +
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISK 564

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M  +G   D   Y T I+GLCK      AL+L R +R+   +   ++Y+ +I 
Sbjct: 565 AADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQ 624

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +    + A  LF  +       D  TY I+   LC   G + +A D  ++M   G  
Sbjct: 625 SLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI 684

Query: 373 PDCVAFNTLMLGCI 386
           P+  +F  L  G +
Sbjct: 685 PEFSSFRMLAEGLL 698



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +L   G  PNV T++ LIN LC+ G   +A+ LFEEM +        C PD V
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG------CTPDEV 442

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC  G + KA +LL +M+        VTYN++I G C      EA+ +F +M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  N +TF+ ++D LC   ++++A++L++ MI  G++PN   YN+++  +C  G +
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A ++  +M + G + +V +Y+ LING CK +  + AL L   M  KG+KPT   YN +
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPV 622

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  +    A  LF EM   G   D + Y+    GLC+  G I EA +    +    
Sbjct: 623 IQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNG 682

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 683 FIPEFSSFRMLAEGLLNLG 701



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 2/351 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           FGV  + +  +Y  ++  L +   +   +    +M  + I PDVVT+N+VI   C A  +
Sbjct: 155 FGV--QANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQA 212

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A  +  EM    V P+  TF+ +M+   + G +E A +L   M ++G  P +   N L
Sbjct: 213 RTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVL 272

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  ++S  +NG C+N  ++ AL +   ML +G 
Sbjct: 273 INGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGC 332

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P V TY+T+   L    ++E A  + ++M   G   DT  + T I  LC    + EAL+
Sbjct: 333 EPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALD 392

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R L +     ++ +++ LI+ LCK G   +A  LF  +       D VTYNI+I  LC
Sbjct: 393 LARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + GK+ KA DL  +ME  G     V +NT++ G  +     +  E+  +MD
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 9/159 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +AA +   + A G E +V+TY+TLINGLC+   T  AL L   M + G        KP  
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG-------MKPTP 616

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFI 119
             Y  +I  L +      A  L  +M +    PD  TY  V RG C       EA    +
Sbjct: 617 KAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLV 676

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           EM D G  P   +F ++ + L   G  +   + +EL+++
Sbjct: 677 EMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE 715



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSK--GIKPTVVTYNTLF-----IGLFEIHQVERAFKLF 258
           L+    +  + E AL + +  L++  G+ P+   Y  +       G F++ +V     L 
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKV-----LV 113

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT-LRILKCELDIRSYSCLIDGLCK 317
            EM+R G        ++FI    +     +A +L    L +   + +   Y+ L+  L +
Sbjct: 114 GEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAE 173

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
             ++K+    +  +    +  DVVT+N +I ALC   +   A  +  +M +  VAPD   
Sbjct: 174 GSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETT 233

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDE 403
           F TLM G +        + L  RM E
Sbjct: 234 FTTLMEGFVEEGSIEAALRLKARMSE 259


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  230 bits (587), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K  G  P+ +TY+++I+G  + G     +  FEEM +      + C+PD + 
Sbjct: 152 ARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVIT 205

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++I+  CK G + K  E   +MK   + P+VV+Y++++  FC  +   +A + +++M 
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN  T++ ++D  CK G + +A +L   M+++GV  N   Y  L+DG C   R+ 
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMK 325

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A++LF  M + G   N+ SY+ LI+G+ K K ++ AL L +E+  +GI+P ++ Y T  
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI 385

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + ++E A  + +EMQ +G+ A+T  Y T +D   K+G   E L L   ++ L  E
Sbjct: 386 WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHE 445

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
           + + ++  LIDGLCK+  +  A + F  +     L  +   Y  MI  LC + ++  A  
Sbjct: 446 VTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATT 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M  +G+ PD  A+ +LM G ++     + + L  +M E
Sbjct: 506 LFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE 547



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 186/343 (54%), Gaps = 2/343 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L   G +++A +   +MK   + P   + N ++  F     ++  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           KR F +M+  G +P V T+++++D + K G +E A  L E M   G+ P+   YN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   GR++     F  M+SM C+ +V +Y+ LIN +CK+ ++   L  Y EM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV+Y+TL     +   +++A K + +M+R G   + + Y + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++ +Y+ LIDGLC + R+K A +LF  +    +I ++ +YN +IH      
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC--IRNNETSKVV 395
            MD+A +L  +++ +G+ PD + + T + G   +   E +KVV
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 188/422 (44%), Gaps = 47/422 (11%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++K+  CEP+VITY++LIN  C++G     L  + EM           KP+ V Y+T
Sbjct: 190 FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG------LKPNVVSYST 243

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++D  CKE  + +A +  + M+     P+  TY S++   C   + ++A RL  EM++ G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+ NVVT++ ++D LC   +M+EA +L   M+  GV PN   YN L+ GF     ++RA 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   ++  G + ++  Y   I G C  ++IE A  + +EM   GIK   + Y TL    
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 246 FEIHQVERAFKLFDEMQR------------------------------------HGVAAD 269
           F+         L +EMQ                                      G+  +
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   IDGLCK   +  A  LF  +       D  +Y+ L+DG  K G +  A  L  
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD---CVAF--NTLMLG 384
            +    +  D++ Y  ++       ++ KA     +M  + + PD   C+        LG
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELG 603

Query: 385 CI 386
           CI
Sbjct: 604 CI 605



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   +  ++  G  PN  TY++L++  C+ G+   A  L  EM+    E+ VV      
Sbjct: 256 QAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVV------ 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLC    + +A++L  +M    + P++ +YN++I GF  A + + A  L  E+
Sbjct: 310 TYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+QP+++ +   +  LC   K+E A  ++  M + G++ N  +Y TLMD +  +G  
Sbjct: 370 KGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
                L   M+ +  +  V ++ +LI+G CKNK +  A+  +  M +  G++P    Y  
Sbjct: 430 TEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTA 489

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL + +QV+ A  LF++M + G+  D  AY + +DG  K G ++EAL L   +  + 
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
            +LD+ +Y+ L+ G  +  +L+ A      +    ++ D V
Sbjct: 550 MKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 147/292 (50%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA + F +M    V P   + + ++ +  K GK +   +  + MI  G +P  F YN ++
Sbjct: 81  EATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMI 140

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D     G +  A+ LF  M+  G   +  +Y+ +I+GY K   ++  +  + EM S   +
Sbjct: 141 DCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCE 200

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TYN+L     +  ++ +  + + EM++ G+  +  +Y T +D  CK   + +A++ 
Sbjct: 201 PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKF 260

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           +  +R +    +  +Y+ L+D  CK G L  A+ L + +    +  +VVTY  +I  LC 
Sbjct: 261 YVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M +A  LF  M   GV P+  ++N L+ G ++     + +ELL+ +  R
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           S++ + +    ++EE     EL     V  P   V++ L       G +  A + F  M+
Sbjct: 31  SILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMK 90

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                    S + L++ + K  + +G    + +M+  G KPTV TYN +   +++   +E
Sbjct: 91  RFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIE 150

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  LF+EM+  G+  DT  Y + IDG  K G + + +  F  ++ + CE D+ +Y+ LI
Sbjct: 151 AARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLI 210

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +  CKSG+L    E +  + +  L  +VV+Y+ ++ A C +  M +A   ++DM   G  
Sbjct: 211 NCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHV 270

Query: 373 PDCVAFNTLM 382
           P+   + +L+
Sbjct: 271 PNEFTYTSLV 280



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 24/333 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +LK  G +P+++ Y T I GLC       A  +  EM     E G+  K + +I
Sbjct: 362 ALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM----QENGI--KANTLI 415

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT++D   K G   +   LL +M++ +    VVT+  +I G C     ++A   F  M 
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475

Query: 123 -DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+QPN   ++ ++D LCK  +++ A+ L E M Q G+ P+   Y +LMDG    G +
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M  +G K ++ +Y+ L+ G+ +  +++ A S   EM+ + I P  V    +
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGV 595

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR---- 297
               +E+  ++ A  L   + +H +        T  +      Y   +L+ F   R    
Sbjct: 596 LKKHYELGCIDEAVGLQSYLMKHQLL-------TSDNNNALPNYSDPSLDFFEEHRNRVW 648

Query: 298 ILKCELDIRSYSCLIDG------LCKSGRLKIA 324
            L+ EL +R++  ++ G       C S R ++ 
Sbjct: 649 DLQSELLLRTHQLIVRGEAYGWIYCSSARAEMG 681


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +LFT++K  G  P+++TY++LI+G  + G     + +FE+M + +      C PD + 
Sbjct: 274 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD------CDPDVIT 327

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  CK   + KA E L +MK   + P+VVTY++ I  FC      EA + F++M 
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 387

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + PN  T++ ++D  CK G + EA +L+E ++Q G++ N   Y  L+DG C  GR+ 
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 447

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E+F +M + G   N  +Y+ L++G+ K KE+E A  +  EM  K IKP ++ Y T+ 
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL    ++E A  L  E++  G+  +   Y T +D   K+G   EAL L   +  L   
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +Y  LIDGLCKSG ++ A   F  +    L  +V  Y  ++  LC +   + A  L
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKL 627

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F +M  KG+ PD +A+  L+ G +++    + + L  RM E
Sbjct: 628 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 668



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  ++     PN  TY++LI+  C+ G+   AL L EE++          K + V
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG------IKLNVV 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLC+EG + +A+E+   M +  + P+  TY +++ GF  A +   AK +  EM
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ ++P+++ +  I+  LC   ++EEA  L+  + + G+  NA +Y TLMD +  +G+ 
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M  +G      +Y  LI+G CK+  ++ A+  +  M   G++P V  Y  L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +  E A KLFDEM   G+  D  AY   IDG  K+G + EAL L   +  +  
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELD+ +Y+ LI GL  SG+++ A  L   +    ++ D V Y  +I    A GK+D+A +
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE 731

Query: 362 LFLDMEAKGV 371
           L  +M  +G+
Sbjct: 732 LQNEMAKRGM 741



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 176/330 (53%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L + G +++A E  L+M+   + P   + N+++         + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           ++ F +M   G++ +V T+++++D LCK G +E A  L   M + G  P+   YN+L+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               G ++    +F  M+   C  +V +Y+ LIN +CK + +  A     EM + G+KP 
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+T      +   ++ A K F +M+R  +  + + Y + ID  CK G + EAL+L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L++ +Y+ L+DGLC+ GR+K A E+F ++    +  +  TY  ++H      
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +M+ A D+  +M+ K + PD + + T++ G
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWG 509



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 152/292 (52%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA   F++M    V P   + + ++  L K G+ + + +  + M   G++ + F YN ++
Sbjct: 203 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 262

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D  C  G +  A+ LF  M+  G   ++ +Y+ LI+G+ K   ++  + ++ +M      
Sbjct: 263 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 322

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TYN L     +  ++ +AF+   EM+ +G+  +   Y TFID  CK G + EA++ 
Sbjct: 323 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 382

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +R +    +  +Y+ LID  CK+G L  A +L   + +  +  +VVTY  ++  LC 
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 442

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G+M +A ++F  M   GVAP+   +  L+ G I+  E     ++L  M E+
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 214/405 (52%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + +++  +   P+V TY++LI G CR  +  +A  +F+ M+         C P++V
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG------CDPNSV 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG VD+A ++L +M +K I P V TY   I   C      EA  L   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PNV T++ ++  L + GK+E A  L   M++ G+ PN   YN L++  C+ GR 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  ME  G   N  +Y+ +I G C   +IE A+ L+ +ML  G  PTVVTYNTL
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V  A +L D M+ +G   D W Y   + G  K G +  A   F+   +++C
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ--EMVEC 507

Query: 302 ELDIR--SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L+    SY+ LIDG  K G++ IA  L   +       +V +YN +I+ L  + +  +A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +   M  +G+ P+ + + TL+ G  RN  T    ++ H M++R
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 207/399 (51%), Gaps = 10/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K  GC PNV TY+ LI+GL R G   VA+ L+ +M+      G+V  P+ V Y  
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 378

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ LC  G    A ++   M+      +  TYN +I+G C   D  +A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P VVT++ +++     G +  A++LL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P V +YN +  GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   KC  ++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS LI GLC+ G+   A  +        L     TY+ ++  LC  G+  +A  L  D
Sbjct: 619 YTYSSLIYGLCQEGKADEAERMSEIGCEPTL----DTYSTLVSGLCRKGRFYEAEQLVKD 674

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M+ +G  PD   + +L++   +N E    +++ H ++ +
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 713



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   GC+PN +TYSTLINGLC  G    AL++ EEMI    E G+  +P    
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYT 305

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT  I  LC     ++A EL+ +MK +   P+V TY ++I G         A  L+ +M+
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN VT++ +++ELC  G+   A ++   M   G   N   YN ++ G CL G + 
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  LF  M  MG    V +Y+ LINGY     +  A  L   M   G +P   TYN L 
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  ++E A   F EM   G+  +  +Y   IDG  K+G +  AL L + +  + C 
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ SY+ +I+GL K  R   A ++   +    L+ +V+TY  +I  LC +G+   A  +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F DME +   P+   +++L+ G
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYG 627



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 208/438 (47%), Gaps = 45/438 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ K+   G  PN +TY+ LIN LC  G    AL +F  M  G+G        +   
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQT 410

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  II GLC  G ++KA  L  +M      P VVTYN++I G+    + N A RL   M 
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +P+  T++ ++    K GK+E AS   + M++ G+ PN   Y  L+DG    G+V+
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   ME MGC  NV SY+ +ING  K      A  +  +M+ +G+ P V+TY TL 
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL    + + AFK+F +M++     + + Y + I GLC+ G   EA      +  + CE
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCE 646

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWEL----------------------------------- 327
             + +YS L+ GLC+ GR   A +L                                   
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           FHS+        +  Y  +I ALC  G++++A  LF +M  K    D + +  L+ G ++
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766

Query: 388 NNETSKVVELLHRMDERN 405
             E    ++LLH M+ +N
Sbjct: 767 EGELDLCMKLLHIMESKN 784



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 190/360 (52%), Gaps = 10/360 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA L   +K  GCEP+  TY+ L++G  + G    A   F+EM+    E G+   P+ V 
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVS 515

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG  K+G VD A  LL +M++   NP+V +YN+VI G    N  +EA+++  +M+
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+ PNV+T++ ++D LC+NG+ + A ++   M +    PN + Y++L+ G C  G+ +
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+     M  +GC+  + +YS L++G C+      A  L  +M  +G  P    Y +L 
Sbjct: 636 EAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           I   +  +V+ A K+F  ++  G       YR  I  LCK G + EA  LF  +   +  
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   ++ L+DGL K G L +  +L H +       ++ TY I+   L   GK  ++  L
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 189/377 (50%), Gaps = 10/377 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+   G  P V+TY+TLING    G+   A  L + ++  NG     C+PD  
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD-LMKENG-----CEPDEW 479

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G  K G ++ A     +M +  +NP+ V+Y ++I G       + A  L   M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV +++ +++ L K  +  EA ++ + M++ G+ PN   Y TL+DG C  GR 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++F  ME   C  N+++YS LI G C+    EG       M   G +PT+ TY+TL
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ----EGKADEAERMSEIGCEPTLDTYSTL 655

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L  +M+  G   D   Y + +   CKN  +  AL++F ++     
Sbjct: 656 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 715

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L +  Y  LI  LCK+G+++ A  LF ++      AD + + +++  L  +G++D    
Sbjct: 716 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 775

Query: 362 LFLDMEAKGVAPDCVAF 378
           L   ME+K   P+   +
Sbjct: 776 LLHIMESKNFTPNIQTY 792



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 44/411 (10%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT--TIIDGLCKEGFVDKAKELLLQMK 87
           CR    I  +  F   I+G G FG        +Y+  T++  L K   V+ A+ L  QM 
Sbjct: 138 CRNEEEIRRVADFLNEISGMG-FGFS------LYSCNTLLIQLAKFEMVEGARNLYKQML 190

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           +  I P ++T+N++I          EA+ +  ++    + P+V T++ ++   C+N  ++
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE--------------------- 186
            A  + + M++ G  PN+  Y+TL++G C  GRV+ A +                     
Sbjct: 251 LAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 187 --------------LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                         L   M+  GC+ NV +Y+ LI+G  +  ++E A+ LY +ML +G+ 
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VTYN L   L    +   A K+F  M+ HG  A+T  Y   I GLC  G I +A+ L
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 430

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +  +     + +Y+ LI+G    G +  A  L   +       D  TYN ++     
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            GK++ A   F +M   G+ P+ V++  L+ G  ++ +    + LL RM+E
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +++  GC PNV +Y+ +INGL +      A  + ++M+    E G++  P+ + 
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV----EQGLL--PNVIT 585

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+IDGLC+ G    A ++   M+ +   P++ TY+S+I G C    ++EA+R    M 
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MS 641

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +P + T+S ++  LC+ G+  EA QL++ M + G  P+  +Y +L+   C    V+
Sbjct: 642 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 701

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F S+E+ G + ++  Y  LI   CK  ++E A +L+  ML K      + +  L 
Sbjct: 702 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 761

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            GL +  +++   KL   M+      +   Y      L + G  +E+  L   L++LK
Sbjct: 762 DGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 46/368 (12%)

Query: 80  KELLLQMKDKNINPDVVTYN---SVIRGFCYANDSNEAKR---LFIEMMDQGVQPNVVT- 132
           K+L  Q+K  ++   V  +    SVI+ F + +     K     FI M+++ V+  V   
Sbjct: 67  KQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAP 126

Query: 133 ---FSVIMDELCKNGK-MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
                ++M + C+N + +   +  L  +  +G   + +  NTL+        V  A+ L+
Sbjct: 127 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLY 186

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M + G + ++ +++ LIN   K  ++  A  + S++    + P V TY +L +G    
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL------------ 296
             ++ AF +FD M + G   ++  Y T I+GLC  G + EAL++   +            
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 297 ---------------------RILK--CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                                R+ K  C  ++++Y+ LI GL + G+L++A  L+H + +
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             L+ + VTYN +I+ LC  G+   A  +F  ME  G   +   +N ++ G     +  K
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 394 VVELLHRM 401
            + L  +M
Sbjct: 427 AMVLFEKM 434



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 25/230 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  +  K+   G  PNVITY+TLI+GLCR G T  A  +F +M               I
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 47  NGNGEFG----------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
            G  + G          + C+P    Y+T++ GLC++G   +A++L+  MK++   PD  
Sbjct: 626 YGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            Y S++   C   + + A ++F  +  +G Q ++  +  ++  LCK G++EEA  L + M
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++     +  V+  L+DG    G ++   +L   MES     N+ +Y IL
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 40/222 (18%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNKE-IEGALSLYSEMLSKGIKPTVVTYNTLF 242
           F+SM +   +  VF+ +    IL+   C+N+E I       +E+   G   ++ + NTL 
Sbjct: 111 FISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 170

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           I L +   VE A  L+ +M   G+      + T                           
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNT--------------------------- 203

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                   LI+ L K G+++ A  +   + +  L  DV TY  +I   C +  +D A  +
Sbjct: 204 --------LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M  +G  P+ V ++TL+ G        + +++L  M E+
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 207/409 (50%), Gaps = 18/409 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  +    GCEP+ +TY+  I+GLC+      A  L ++M          C P  V
Sbjct: 25  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK------CLPTTV 78

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGL K G +D+A  +L QM +K  +P + TY  VI G   A    EA+R+F++M
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR-------PNAFVYNTLMDG 174
           +  G +P+   ++ ++  LCK+GK EEA  L +   +   R       P+   Y +L+DG
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK---EANARKHHATAVPDVVTYTSLIDG 195

Query: 175 FCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C  GR+  A+++F       G   +  +Y+ +I+G CK   +E     + EM ++G +P
Sbjct: 196 LCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 255

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             VTY  L  G  +   + +A +++ +M + G    T  Y   +DGLCK G + EA   F
Sbjct: 256 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 315

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +    C   + +YS L+DG C  G +  A ELF  +       ++V+YNI+I  LC  
Sbjct: 316 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 375

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRM 401
           GK+ KA+  F  +  + + PD   FN  + G C R +  S  VEL   M
Sbjct: 376 GKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424



 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 212/398 (53%), Gaps = 15/398 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+++ ++ +INGLCR      A ++ E  +         C+PD V Y   IDGLCK  
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG------CEPDYVTYNVFIDGLCKAE 56

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD A +LL +M +K   P  VTY +++ G   A   +EA  +  +M+++G  P + T++
Sbjct: 57  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYT 116

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           V++D L K G++EEA ++   M+  G RP+AFVY  L+ G C +G+   A  L+   E+ 
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY--KEAN 174

Query: 195 GCKH------NVFSYSILINGYCKNKEIEGALSLYS-EMLSKGIKPTVVTYNTLFIGLFE 247
             KH      +V +Y+ LI+G CK   I  A  ++  E + +G  P  VTY ++  GL +
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           + +VE   + F EM+  G   D   Y   IDG  K   I +A  ++R +      +   +
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ ++DGLCK+GR+  A+  F ++     +A VVTY+ ++   C++G +  A +LF  M 
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +G  P+ V++N ++ G  R  + +K      ++ +R 
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 197/358 (55%), Gaps = 7/358 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY++LI+GLC+ G  + A  +F++     G       PDAV YT+IIDGLCK G V
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI-----PDAVTYTSIIDGLCKLGRV 238

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++  E   +M+++   PD VTY ++I GF  A    +A R++ +M+  G   + VT+++I
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D LCK G++ EA      M + G       Y+ LMDGFC  G V+ A ELF  M   GC
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE-IHQVERAF 255
           + N+ SY+I+I G C+  ++  A   + ++L + + P V T+N    GL + +  V    
Sbjct: 359 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGV 418

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF+ M   G + +  +Y   +DG+C+ G +  ALE+FR +       D+  ++ LI  L
Sbjct: 419 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           C +GR+  A E+F  L R     D  +Y  ++  L    +M++A  L   M+ +G AP
Sbjct: 479 CIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 4/195 (2%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           M C  ++ +++++ING C+ K ++ A S+    +  G +P  VTYN    GL +  +V+ 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           AF+L  +M        T  Y   +DGL K G + EA+ +   +        +++Y+ +ID
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--- 370
           GL K+GR++ A  +F  +       D   Y  +I  LC  GK ++A+ L+ +  A+    
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 371 -VAPDCVAFNTLMLG 384
              PD V + +L+ G
Sbjct: 181 TAVPDVVTYTSLIDG 195



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%)

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           + C  D+ +++ +I+GLC+  RL  A+ +     R     D VTYN+ I  LC   ++D 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A  L   M+ K   P  V +  L+ G ++     + + +L +M E+ 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 198/330 (60%), Gaps = 6/330 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G   + ++Y TLI+GLC+ G T  AL+L + +       G + + +AV
Sbjct: 25  QAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQLNAV 78

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I G+CK+  V+ A +L  +M  K I+P+VVTY+++I GF       +A  LF ++
Sbjct: 79  MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 138

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+  TF++++D  CK+ KM+E   +  +M++ G+ P+   YN+L+DG+ L   V
Sbjct: 139 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEV 198

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N AK +F +M   G   ++ SY+ILING+CK K+++ A++L++EM  K I P VVTYN+L
Sbjct: 199 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 258

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  A +L D+M   GV  +   Y + ID L K   + +A+ L    +    
Sbjct: 259 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 318

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +  + +Y+ LIDGLCK GRLK A  +F  L
Sbjct: 319 QPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 177/327 (54%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+ +   T+I GLC +G + +A     ++     + D V+Y ++I G C   ++  A  L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              +  + VQ N V ++ ++  +CK+  + +A  L   M+  G+ PN   Y+ L+ GF +
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++  A +LF  +     K + ++++IL++G+CK+++++   ++++ M+ +GI P VVT
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN+L  G   + +V  A  +F+ M + GV  D  +Y   I+G CK   + +A+ LF  + 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++ +Y+ LIDGL KSGR+  A +L   +    +  +++TYN +I AL    ++D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           KA  L    + +G+ P    +  L+ G
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDG 331



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 165/313 (52%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P+ +T N++I+G C     ++A     +++  G   + V++  ++  LCK G+   A  
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           LL+ +    V+ NA +YNT++ G C    VN A +L+  M S G   NV +YS LI+G+ 
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
              +++ A+ L+++++ + IKP   T+N L  G  +  +++    +F  M + G+  D  
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + +DG      +  A  +F T+       DIRSY+ LI+G CK  ++  A  LF+ +
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +I +VVTYN +I  L   G++  A  L   M  +GV P+ + +N+++    + ++ 
Sbjct: 244 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQV 303

Query: 392 SKVVELLHRMDER 404
            K + L+ +  ++
Sbjct: 304 DKAIALITKFKDQ 316



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 35/281 (12%)

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY-------- 210
           +G  PN    NTL+ G CL G++++A      + ++G   +  SY  LI+G         
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 211 ---------------------------CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
                                      CK+K +  A  LYSEM+SKGI P VVTY+ L  
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G F + +++ A  LF+++    +  D + +   +DG CK+  + E   +F  +       
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ L+DG      +  A  +F+++ +G +  D+ +YNI+I+  C   K+DKA +LF
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +M  K + P+ V +N+L+ G  ++   S  ++L+ +M +R
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 216/429 (50%), Gaps = 29/429 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-------------- 47
           EA  L   L +FGCEP+V++Y+ ++ GLC          L EEM+               
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 48  ----GNGEFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                NG F  V           C PD  +Y TIIDG+CKEG ++ A E+L +M    + 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VV YN++++G C A    E + L  EM D+    + VTF++++D  C+NG ++   +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M++ G  P+   Y T+++GFC  G ++ A  L  SM + GCK N  SY+I++ G C 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +    A  L S+M+ +G     +T+NTL   L +   VE+A +L  +M  +G + D  +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T IDGL K G   EALEL   +       +   YS +   L + GR+    ++F ++ 
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 606

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              + +D V YN +I +LC  G+ ++A +    M + G  P+   +  L+ G        
Sbjct: 607 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 666

Query: 393 KVVELLHRM 401
           +  E+L  +
Sbjct: 667 EAQEMLTEL 675



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++   GC P    Y  ++   CR G    A+ + E++ +  G     C  D  
Sbjct: 177 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARG-----CALDVG 230

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C +G VD+A  LL  +      PDVV+YN+V++G C A      + L  EM
Sbjct: 231 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 290

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M++ G  P+  +Y T++DG C  G +
Sbjct: 291 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 350

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K      VT+N L
Sbjct: 351 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A +
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 570



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 193/366 (52%), Gaps = 6/366 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 321 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA----HEILNRMPSYGL--KPNVVCYNT 374

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC     ++ +ELL +M DK+   D VT+N ++  FC     +    L  +M++ G
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C   R   A+
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 554

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + + A +L + M   G++ +T  Y +    L + G I + +++F  ++      D 
Sbjct: 555 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 614

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK G  + A E    +     + +  TY I+I  L ++G + +A ++  +
Sbjct: 615 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 674

Query: 366 MEAKGV 371
           + +KG 
Sbjct: 675 LCSKGA 680



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 206/434 (47%), Gaps = 41/434 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   L A GC  +V   + ++N +C  G    AL+L  ++ +    FG  C+PD V 
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS----FG--CEPDVVS 266

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLC        +EL+ +M      P++VT+N++I   C          +  +M+
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV 326

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-------- 174
           + G  P++  ++ I+D +CK G +E A ++L  M   G++PN   YNTL+ G        
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 386

Query: 175 ---------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                                      FC  G V+R  EL   M   GC  +V +Y+ +I
Sbjct: 387 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 446

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+CK   I+ A+ L   M + G KP  ++Y  +  GL    +   A  L  +M + G  
Sbjct: 447 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 506

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   + T I+ LCK G + +A+EL + + +  C  D+ SYS +IDGL K+G+   A EL
Sbjct: 507 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 566

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            + +    +  + + Y+ +  AL  +G+++K   +F +++   +  D V +N ++    +
Sbjct: 567 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 626

Query: 388 NNETSKVVELLHRM 401
             ET + +E L  M
Sbjct: 627 RGETERAIEFLAYM 640



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC  N IT++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 491 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 543

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  D+A ELL  M +K ++P+ + Y+S+          N+  ++F 
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK G+ E A + L  M+  G  PN   Y  L+ G    G
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 663

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 664 FVKEAQEMLTELCSKGALRKHLMKHFGIV 692



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++   C+ G++E A +L      + V PNA+ Y  ++   C  GR+  A  +   M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC      Y +++   C+      A+ +  ++ ++G    V   N +   + +   V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   G   D  +Y   + GLC         EL   +  + C  +I +++ LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             LC++G  +   E+   +       D+  Y  +I  +C +G ++ AH++   M + G+ 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           P+ V +NTL+ G        +  ELL  M +++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 208/385 (54%), Gaps = 7/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ ++Y  +INGLC      +A  L E+M           KP+ V+Y+ +I     EG +
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSILIMAYASEGRI 489

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A+ LL  M    + PD+  YN++I     A    EA    +E+  +G++P+ VTF   
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K GKM EA++  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G 
Sbjct: 550 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V + S  I+G  KN  ++ AL ++SE+  KG+ P V TY++L  G  +  +VE+AF+
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L DEM   G+A + + Y   +DGLCK+G I  A +LF  +     E D  +YS +IDG C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KS  +  A+ LFH +P   +      YN ++H  C +G M+KA +LF +M  KG A   +
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TL 788

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
           +FNTL+ G  ++ +  +  +L   M
Sbjct: 789 SFNTLIDGYCKSCKIQEASQLFQEM 813



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 217/426 (50%), Gaps = 41/426 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N+ITY+ LI+GLC+ G    A  + + M+       + CKP++  +  +I+G C+E
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT------LGCKPNSRTFCLLIEGYCRE 416

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + +A ELL +M+ +N+ P  V+Y ++I G C+  D + A +L  +M   G++PNVV +
Sbjct: 417 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 476

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------------------- 173
           S+++      G++EEA +LL+ M   GV P+ F YN ++                     
Sbjct: 477 SILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536

Query: 174 ---------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                          G+  TG++  A + F  M   G   N   Y++LING+ K   +  
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           ALS++  + + G+ P V T +    GL +  +V+ A K+F E++  G+  D + Y + I 
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK G + +A EL   + +     +I  Y+ L+DGLCKSG ++ A +LF  +P   L  
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D VTY+ MI   C    + +A  LF +M +KGV P    +N L+ GC +  +  K + L 
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 399 HRMDER 404
             M ++
Sbjct: 777 REMLQK 782



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 205/382 (53%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA ++F +L A G  P+V T S  I+GL + G    AL +F E+     E G+V  PD 
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL----KEKGLV--PDV 648

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++I G CK+G V+KA EL  +M  K I P++  YN+++ G C + D   A++LF  
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ VT+S ++D  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I P  VTY T
Sbjct: 769 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     +  ++E A  LF EMQ   +  DT  Y + + G  K G   E   LF  +    
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  +Y  +I   CK   L  A++L   +    ++     ++++I ALC    + +A 
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L  +M   G+ P   A NTL+
Sbjct: 948 KLLDEMGELGLKPSLAACNTLV 969



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 218/402 (54%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA  F ++   G  PN   Y+ LING  + G+ + AL++F  +       GV+  PD  
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL----HALGVL--PDVQ 614

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +  I GL K G V +A ++  ++K+K + PDV TY+S+I GFC   +  +A  L  EM
Sbjct: 615 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 674

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+  ++ ++D LCK+G ++ A +L + M + G+ P++  Y+T++DG+C +  V
Sbjct: 675 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 734

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M S G + + F Y+ L++G CK  ++E A++L+ EML KG   T +++NTL
Sbjct: 735 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTL 793

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LF EM    +  D   Y T ID  CK G + EA  LF+ ++    
Sbjct: 794 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +Y+ L+ G  K G+    + LF  +    +  D VTY ++I+A C +  + +A  
Sbjct: 854 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 913

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  ++  KG+       + L+    +  + ++  +LL  M E
Sbjct: 914 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 208/454 (45%), Gaps = 76/454 (16%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V TY+ L+  LC+TG    A  +  EM     E G+   P+  IY+ +I+G+C+ G +D
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEM----DEKGL--NPNEFIYSLVIEGMCQVGDID 280

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP--------- 128
           +A EL   M +K + P+  TY  +  G C A   NEAK  F EM   G++P         
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 129 --------------------------NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
                                     N++T++V++  LCK GKME+A+++L+ M+ +G +
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN+  +  L++G+C    + RA EL   ME      +  SY  +ING C  K++  A  L
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR-------- 274
             +M   G+KP VV Y+ L +      ++E A +L D M   GVA D + Y         
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 275 ---------------------------TFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
                                       FI G  K G + EA + F  +       +   
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LI+G  K+G L  A  +F  L    ++ DV T +  IH L  +G++ +A  +F +++
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            KG+ PD   +++L+ G  +  E  K  EL   M
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 674



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 198/402 (49%), Gaps = 9/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +F   K      ++I  ++L+  L + G   +   ++  M++    F      D  
Sbjct: 176 EAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGF------DVY 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++  LCK G +  AK +L++M +K +NP+   Y+ VI G C   D +EA  L   M
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  T+++I   LC+  +M EA    E M + G++P+    + L+DGF   G +
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   M S G   N+ +Y++LI+G CK  ++E A  +   M++ G KP   T+  L
Sbjct: 350 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G    H + RA +L DEM++  +     +Y   I+GLC    +  A +L   +     
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  YS LI      GR++ A  L   +    +  D+  YN +I  L   GKM++A  
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             L+++ +G+ PD V F   +LG    ++T K+ E     DE
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILG---YSKTGKMTEAAKYFDE 568



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 192/396 (48%), Gaps = 42/396 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
            EA  +F++LK  G  P+V TYS+LI+G C+ G    A  L +EM + G         P+ 
Sbjct: 631  EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-------IAPNI 683

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             IY  ++DGLCK G + +A++L   M +K + PD VTY+++I G+C + +  EA  LF E
Sbjct: 684  FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743

Query: 121  MMDQGVQPN----------------------------------VVTFSVIMDELCKNGKM 146
            M  +GVQP+                                   ++F+ ++D  CK+ K+
Sbjct: 744  MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 803

Query: 147  EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +EASQL + MI   + P+   Y T++D  C  G++  A  LF  M+      +  +Y+ L
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 207  INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            + GY K  +     +L+ +M++KG+KP  VTY  +     +   +  AFKL DE+   G+
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 267  AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                  +   I  LCK   + EA +L   +  L  +  + + + L+    ++G++  A  
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 327  LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +F  +    L+ D  T   +++    D   + A +L
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 35/358 (9%)

Query: 60  AVIYTTIIDGLCKEGFVDKA-----------------------KELLL------------ 84
            V++  +ID   + G +D+A                       K+LL             
Sbjct: 158 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYN 217

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            M D  +  DV TY  ++   C   D   AKR+ IEM ++G+ PN   +S++++ +C+ G
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            ++EA +L   M + G+ PN + Y  +  G C   R+N AK  F  M+  G K +  + S
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G+ +  +I+  L +   M+S GI   ++TYN L  GL +  ++E+A ++   M   
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL 397

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   ++  +   I+G C+   +  ALEL   +          SY  +I+GLC    L +A
Sbjct: 398 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 457

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            +L   +    L  +VV Y+I+I A  ++G++++A  L   M   GVAPD   +N ++
Sbjct: 458 NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 141/290 (48%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA  +F    +  +  +++  + ++ +L K G ME   ++   M+   +  + + Y  L
Sbjct: 175 DEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYL 234

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +   C TG +  AK + + M+  G   N F YS++I G C+  +I+ A+ L   M  KG+
Sbjct: 235 VGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGL 294

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P   TY  +  GL    ++  A   F+EMQ+ G+  D  A    IDG  + G I E L 
Sbjct: 295 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 354

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   +      +++ +Y+ LI GLCK G+++ A E+   +       +  T+ ++I   C
Sbjct: 355 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +  M +A +L  +ME + + P  V++  ++ G     + S   +LL +M
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  +  ++ A GC P+V  ++ ++ G  R+ +   A  +++ M+    E G   KPD V
Sbjct: 28  ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV----ESGY--KPDNV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GL K G +D++ ++L +M  +   P +  Y+S++R    A   + A  LF EM
Sbjct: 82  SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM 141

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+ + F  ++  LC+ GK+++AS+  + M + G +PN  VYN L+ G C +G++
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  M+S  C  +V +Y+ L++  CK + +E    L+  M + G  P V+T++TL
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E+A ++F  M   G   + + Y T I GLC+   +++A ELF  +     
Sbjct: 262 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
             D  +Y+ LI G CK G +  A +L+  +  G  L   +VT+N +I   C  GK+ +A+
Sbjct: 322 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +L  +M  KG+A D   +  L+ G  R  +  + +E+  +M E+ 
Sbjct: 382 ELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKK 426



 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 205/370 (55%), Gaps = 7/370 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A++LF ++   G  P+ + +  LI GLC+ G    A   F++M          C+P+  +
Sbjct: 134 ASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG------CQPNVPV 187

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLC  G +++A  L  +MK  + +PDVVTYN+++   C A    E  +LF  M 
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PNV+TFS ++  LC+ G++E+A ++   M++ G +PN + Y TL+ G C   +V 
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTL 241
           +A+ELF  M       +  +Y+ LI GYCK   ++ A  LY EM    G++PT+VT+NTL
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++ RA +L  EM   G+AAD+  YR  I GL +   + EALE+++ +R  K 
Sbjct: 368 IDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKF 427

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LD  S    + GLCK+G +  A+ +F +  +   + +  T+ I+  +L   G+++ A  
Sbjct: 428 LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 487

Query: 362 LFLDMEAKGV 371
           L    +A+ +
Sbjct: 488 LMEPAKARDI 497



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 205/385 (53%), Gaps = 7/385 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV TYS++I  L +      +  + EEM+         C PD   +  ++ G  +   ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG------CNPDVFAFNGVMQGFARSNNME 62

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA+E+   M +    PD V+Y+ +I G       +E+ ++  EM+ +G  P++  +S ++
Sbjct: 63  KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             L K  +++ AS L + MI+ G  P+  ++  L+ G C  G+V  A E F  M   GC+
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV  Y++L++G C + ++E A +L++EM S    P VVTYNTL   + +  +VE   KL
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F+ M+  G   +   + T I GLC+ G + +ALE+F ++    C+ +  +Y+ LI GLC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME-AKGVAPDCV 376
           + ++  A ELF  + +  +  D V YN +I   C  G MD+A  L+ +M    G+ P  V
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            FNTL+ G  +  +  +  EL+  M
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEM 387



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 197/405 (48%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  + +++   G  P++  YS+L+  L +      A +LF+EMI G         PD +
Sbjct: 98  ESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH------PDRL 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  +I GLC+ G V  A E   QM      P+V  YN ++ G C +    +A  LF EM
Sbjct: 152 MFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+VVT++ ++D +CK  ++EE  +L E M   G  PN   ++TL+ G C TG +
Sbjct: 212 KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+F SM   GCK N ++Y+ LI+G C+ +++  A  L+ +M    I P  V YN+L
Sbjct: 272 EKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G  +   ++ A KL+ EM    G+      + T IDG CK G +  A EL   +    
Sbjct: 332 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 391

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y  LI GL ++ +L  A E++  +     + D V+    +  LC  G +D+A+
Sbjct: 392 LAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 451

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +F      G  P+   F  L    I+        +L+     R+
Sbjct: 452 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 172/318 (54%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M+DKNI  +V TY+S+I+         E+ ++  EMM  G  P+V  F+ +M    ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ME+A ++ + M++ G +P+   Y+ L+ G    G+++ + ++   M   G   ++ +YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+    K + ++ A SL+ EM+  G  P  + +  L +GL +  +V+ A + F +M +HG
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y   + GLC +G + +A  LF  ++   C  D+ +Y+ L+D +CK+ R++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF ++     + +V+T++ +IH LC  G+++KA ++F  M   G  P+   + TL+ G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 386 IRNNETSKVVELLHRMDE 403
            R  +  +  EL  +M +
Sbjct: 301 CRAEKVIQARELFEKMTQ 318



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 141/269 (52%), Gaps = 7/269 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF  ++A G  PNVIT+STLI+GLCRTG    AL +F  M+         CKP+  
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKY 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GLC+   V +A+EL  +M    I PD V YNS+I G+C     +EA++L+ EM
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+QP +VTF+ ++D  CK GK+  A++L+  M   G+  ++  Y  L+ G     +
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A E++  M       +  S    + G CK   I+ A +++      G  P   T+  
Sbjct: 412 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 471

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L   L ++ +VE A KL +  +   + A 
Sbjct: 472 LSESLIKLGRVEDAQKLMEPAKARDITAQ 500


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 207/372 (55%), Gaps = 7/372 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G EP+++T+ +L+NG C       A++L ++++      G+  +P+ VI
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV------GLGYEPNVVI 186

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIID LC++G V+ A ++L  MK   I PDVVTYNS+I    ++     + R+  +MM
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+TFS ++D   K G++ EA +    MIQ  V PN   YN+L++G C+ G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK++   + S G   N  +Y+ LINGYCK K ++  + +   M   G+     TYNTL+
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +   A K+   M   GV  D + +   +DGLC +G I +AL     L+  K  
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           + I +Y+ +I GLCK+ +++ AW LF SL    +  DV+TY  M+  L       +AH+L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486

Query: 363 FLDMEAK-GVAP 373
           +  M+ + G+ P
Sbjct: 487 YRKMQKEDGLMP 498



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 204/401 (50%), Gaps = 6/401 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF  L+  G   ++ +++TLI+  CR     +AL+   +M+    E      P  V + 
Sbjct: 100 SLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE------PSIVTFG 153

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C      +A  L+ Q+      P+VV YN++I   C     N A  +   M   
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+VVT++ ++  L  +G    ++++L  M+++G+ P+   ++ L+D +   G++  A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K+ +  M       N+ +Y+ LING C +  ++ A  + + ++SKG  P  VTYNTL  G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  +V+   K+   M R GV  DT+ Y T   G C+ G    A ++   +       D
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++ L+DGLC  G++  A      L +   +  ++TYNI+I  LC   K++ A  LF 
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  KGV+PD + + T+M+G  R     +  EL  +M + +
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 153/325 (47%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A  L   M + +  P +V ++ ++      N       LF  +   G+  ++ +F+ +
Sbjct: 61  NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  C+  ++  A   L  M+++G  P+   + +L++GFC   R   A  L   +  +G 
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + NV  Y+ +I+  C+  ++  AL +   M   GI+P VVTYN+L   LF       + +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  +M R G++ D   +   ID   K G ++EA + +  +       +I +Y+ LI+GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             G L  A ++ + L       + VTYN +I+  C   ++D    +   M   GV  D  
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +NTL  G  +  + S   ++L RM
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRM 385



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 144/287 (50%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y   +R   ++   N+A  LF +M +    P++V FS ++  + K  K E    L   + 
Sbjct: 47  YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+  + + + TL+D FC   R++ A      M  +G + ++ ++  L+NG+C      
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+SL  +++  G +P VV YNT+   L E  QV  A  +   M++ G+  D   Y + I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             L  +G    +  +   +  +    D+ ++S LID   K G+L  A + ++ + +  + 
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ++VTYN +I+ LC  G +D+A  +   + +KG  P+ V +NTL+ G
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 7/234 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   + ++      PN++TY++LINGLC  G    A  +   +++  G F     P+A
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS-KGFF-----PNA 324

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+G CK   VD   ++L  M    ++ D  TYN++ +G+C A   + A+++   
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++ TF++++D LC +GK+ +A   LE + +         YN ++ G C   +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKP 233
           V  A  LF S+   G   +V +Y  ++ G  + +    A  LY +M  + G+ P
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 212/388 (54%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E NV T + ++N LC+ G      +   EM  GNG +      D V Y T+I   C+E
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-EGNGIYA-----DMVTYNTLIGAYCRE 166

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++A E++  M DK + P + TYN++I G C       AK + IEM++ G+ P+  T+
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++ E C+     EA ++   M++ GV P+   +++L+  F     +++A   F  M+ 
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +   Y++L++GYC+N  +  AL +  EML +G    V+ YNT+  GL +   +  
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KLFDEM   G   D + + T I G C++G + +AL LF T+     + DI +Y+ LID
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G ++ A EL+  +    +  + +TY I+I+A C+ G + +A  L+  M  KG+ P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
             V  NT++ G  R+ ++SK  E L RM
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRM 494



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 215/402 (53%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +  +  ++++  G   +++TY+TLI   CR G    A     E++N   + G+  KP   
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF----EIMNSMADKGL--KPSLF 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+GLCK+G   +AK +L++M +  ++PD  TYN+++   C  ++ +EAK +F EM
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV P++V+FS ++    +N  +++A      M + G+ P+  +Y  LM G+C  G +
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M   GC  +V +Y+ ++NG CK K +  A  L+ EM+ +G  P   T+ TL
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   + +A  LF  M +  +  D  AY T IDG CK G + +A EL+  +   K 
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  LI+  C  G +  A+ L+  +    +   +VT N +I   C  G   KA +
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
               M AKGVAPD +++NTL+ G +R +   K    +++M++
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK 531



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   G  P+++++S+LI    R  H   AL  F +M     +FG+V  PD V
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM----KKFGLV--PDNV 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT ++ G C+ G + +A ++  +M ++    DV+ YN+++ G C      +A +LF EM
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+  TF+ ++   C++G M +A  L   M Q  ++P+   YNTL+DGFC  G +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL+  M S     N  +Y ILIN YC    +  A  L+  M+ KGIKPT+VT NT+
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G        +A +    M   GVA D  +Y T I+G  +   + +A      +     
Sbjct: 475 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGL 534

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ +++G C+ GR++ A  +   +    +  D  TY  +I+       +++A  
Sbjct: 535 LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFR 594

Query: 362 LFLDMEAKGVAPDCV 376
              +M  +G APD V
Sbjct: 595 FHDEMLQRGFAPDDV 609



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 179/340 (52%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ GL K  +V+ A E+  ++    I  +V T N ++   C     ++ K    EM   
Sbjct: 88  SLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN 147

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  ++VT++ ++   C+ G +EEA +++  M   G++P+ F YN +++G C  GR  RA
Sbjct: 148 GIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARA 207

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K + + M ++G   +  +Y+ L+   C+      A  ++ EML +G+ P +V++++L   
Sbjct: 208 KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAV 267

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                 +++A   F +M++ G+  D   Y   + G C+NG ++EAL++   +    C LD
Sbjct: 268 FSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLD 327

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ +++GLCK   L  A +LF  +     + D  T+  +IH  C DG M KA  LF 
Sbjct: 328 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 387

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M  + + PD VA+NTL+ G  +  E  K  EL   M  R
Sbjct: 388 TMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 427



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 157/292 (53%), Gaps = 6/292 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   GC  +VI Y+T++NGLC+      A  LF+EM+    E G +  PD 
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV----ERGAL--PDF 363

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +TT+I G C++G + KA  L   M  +NI PD+V YN++I GFC   +  +A  L+  
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 423

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + PN +T+ ++++  C  G + EA +L ++MI+ G++P     NT++ G+C +G 
Sbjct: 424 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 483

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A E    M + G   +  SY+ LING+ +   ++ A    ++M  +G+ P ++TYN 
Sbjct: 484 SSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNV 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           +  G     +++ A  +  +M   G+  D   Y   I+G      + EA   
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRF 595



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 148/315 (46%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N   + + ++ +IR +  A    E    F  +  +G   ++   + ++  L K   +E A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++   +++ G+  N +  N +++  C  G+ +  K     ME  G   ++ +Y+ LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   +E A  + + M  KG+KP++ TYN +  GL +  +  RA  +  EM   G++ D
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  Y T +   C+     EA E+F  +       D+ S+S LI    ++  L  A   F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L+ D V Y +++H  C +G M +A  +  +M  +G   D +A+NT++ G  +  
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 390 ETSKVVELLHRMDER 404
             +   +L   M ER
Sbjct: 343 MLTDADKLFDEMVER 357


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 208/400 (52%), Gaps = 3/400 (0%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K    +PNV+T+  LIN LC+      AL +FE+M NG    G + +PD + Y T
Sbjct: 327 LLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNT 385

Query: 66  IIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +IDGLCK G  ++   L+ +M+ +    P+ VTYN +I G+C A+    A+ LF +M   
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKD 445

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV PNVVT + ++D +CK+G++  A +    M   G++ NA  Y  L+  FC    + +A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ELF  M   GC  +   Y  LI+G  +  +++ A  + S+M   G  P +V++N L  G
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
               ++++ A+++  EM+  G+  D   Y T I    K G    A  L + +        
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHDLF 363
           + +Y  LI   C +G L  A ++F  +     +  + V YNI+I++LC   ++D A  L 
Sbjct: 626 VVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            DM+ KGV P+   FN +  G    N  SK  EL+ RM E
Sbjct: 686 DDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 210/443 (47%), Gaps = 50/443 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L +K       PN I  + LI+ LCR+G T  A ++   ++   G        +A 
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM------EAA 306

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               ++  L +     +   LL +MK+ +I P+VVT+  +I   C     +EA  +F E 
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF-EK 365

Query: 122 MDQG------VQPNVVTFSVIMDELCKNGKMEEASQLLELM-IQIGVRPNAFVYNTLMDG 174
           M+ G      V+P+V+T++ ++D LCK G+ EE   L+E M  Q    PN   YN L+DG
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C    +  A+ELF  M   G   NV + + L++G CK+  I GA+  ++EM  KG+K  
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTY  L      ++ +E+A +LFDEM   G + D   Y T I GL + G +  A  +  
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGV------------- 335
            ++      DI S++ LI+G C+  +L  A+E+   +      P GV             
Sbjct: 546 KMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605

Query: 336 ----------------LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG-VAPDCVAF 378
                           L+  VVTY  +IHA C +G +D+A  +F DM +   V P+ V +
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665

Query: 379 NTLMLGCIRNNETSKVVELLHRM 401
           N L+    R N+    + L+  M
Sbjct: 666 NILINSLCRKNQVDLALSLMDDM 688



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 184/390 (47%), Gaps = 16/390 (4%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE--- 81
           LI+ L R G    AL+L +EM+    EF     P++     +   L K   V +A +   
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEF----PPNSNTGHIVFSALSKRDKVGRAVDEEE 253

Query: 82  ---LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
              L+ +  +  + P+ +    +I   C +  ++ A  +   +M  G      + + ++ 
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---ESMG 195
            L +  + +  + LL  M ++ ++PN   +  L++  C   RV+ A E+F  M   ES G
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373

Query: 196 --CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVE 252
              + +V +Y+ LI+G CK    E  L L   M S+    P  VTYN L  G  +   +E
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +LFD+M + GV  +     T +DG+CK+G I  A+E F  ++    + +  +Y+ LI
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
              C    ++ A ELF  +       D + Y  +I  L   GK+D+A  +   M+  G +
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           PD V+FN L+ G  R N+  +  E+L  M+
Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEME 583



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 14/356 (3%)

Query: 62  IYTTIIDGLCKEGFVDKAKELL---LQMK---DKNINPDVVTYNSVIR--GFCYANDSNE 113
           I   +ID L ++G VD A  LL   LQ K     N N   + ++++ +      A D  E
Sbjct: 194 IRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
              L  +  +  V PN +  + ++  LC++G+ + A  +L  ++++G    A   N L+ 
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM---LSKG 230
                    R   L   M+ M  + NV ++ ILIN  CK + ++ AL ++ +M    S G
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373

Query: 231 --IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIV 287
             ++P V+TYNTL  GL ++ + E    L + M+       +T  Y   IDG CK   I 
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            A ELF  +       ++ + + L+DG+CK GR+  A E F+ +    L  + VTY  +I
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A C    ++KA +LF +M   G +PD + + TL+ G  +  +  +   +L +M E
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 42/226 (18%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ + +K+K  G  P++++++ LING CR      A  + +EM N         KPD V 
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG------IKPDGVT 593

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM- 121
           Y T+I    K G    A  L+ +M  + + P VVTY ++I  +C   + +EA ++F +M 
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653

Query: 122 -------------------------------MD----QGVQPNVVTFSVIMDELCKNGKM 146
                                          MD    +GV+PN  TF+ +   L +   +
Sbjct: 654 STSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWL 713

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +A +L++ M +    P+      L +     G   + K      E
Sbjct: 714 SKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYE 759


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 212/407 (52%), Gaps = 4/407 (0%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----CK 57
           E   +  KL  FGCE ++++Y+ ++ GLC          L +EM+  +     +    C 
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD  +Y TIIDG+CKEG  + A E+L +M    + P+VV YN+V++G C A+   +A+ L
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +    + VTF++++D  C+NG ++   +LLE M++ G  P+   Y T+++GFC 
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G ++ A  L  +M S GCK N  SY+I++ G C  +    A  L S M+ +G  P  VT
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +NT+   L +   VE+A +L  +M  +G   D  +Y T IDGL K G   EALEL   + 
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++ +YS +   L + GR+    ++F ++    + +D V YN +I +LC   + D
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A D    M + G  P+   +  L+ G        +  +LL  +  R
Sbjct: 564 LAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 204/439 (46%), Gaps = 39/439 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A A+  ++ +  C P    Y  +I   CR+G    AL + E +               I
Sbjct: 134 DALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVI 193

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCK-------EGFVD---KAKEL 82
           N   + G V              C+ D V Y  ++ GLC        E  +D   K  E 
Sbjct: 194 NAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEA 253

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
           L QM      PD+  Y ++I G C       A  +   M   G++PNVV ++ ++  +C 
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICS 313

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
             + E+A +LL  M Q     +   +N L+D FC  G V+R  EL   M   GC  +V +
Sbjct: 314 ADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 373

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +ING+CK   I+ A+ L   M S G KP  ++Y  +  GL    +   A +L   M 
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           + G   +   + T I+ LCK G + +A+EL + + +  C  D+ SYS +IDGL K+G+ +
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTE 493

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A EL + +    +  +V+TY+ M  AL  +G++DK   +F +++   +  D V +N ++
Sbjct: 494 EALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVI 553

Query: 383 LGCIRNNETSKVVELLHRM 401
               +  ET   ++ L  M
Sbjct: 554 SSLCKRRETDLAIDFLAYM 572



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 195/437 (44%), Gaps = 54/437 (12%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L A G    V+ Y+ ++ G CR G    A  L            V   P+A  Y  ++ G
Sbjct: 75  LDAAGNAAGVVDYNAMVAGYCRVGQVEAARRL---------AAAVPVPPNAYTYFPVVRG 125

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC  G +  A  +L +M  ++  P    Y+ +I   C +   + A R+   +  +G   +
Sbjct: 126 LCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLD 185

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL-- 187
               +++++ +C  G ++E  ++L  +   G   +   YN ++ G C   R    +EL  
Sbjct: 186 TGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMD 245

Query: 188 --------FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
                      M   GC  ++  Y+ +I+G CK    E A  + S M S G+KP VV YN
Sbjct: 246 EMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYN 305

Query: 240 TLFIG-------------LFEIHQ----------------------VERAFKLFDEMQRH 264
           T+  G             L E++Q                      V+R  +L ++M  H
Sbjct: 306 TVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y T I+G CK G I EA+ L + +    C+ +  SY+ ++ GLC + R   A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            EL   + +   + + VT+N +I+ LC  G +++A +L   M   G  PD ++++T++ G
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485

Query: 385 CIRNNETSKVVELLHRM 401
             +  +T + +ELL+ M
Sbjct: 486 LGKAGKTEEALELLNVM 502



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 16/283 (5%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            S ++  LC  G+  +A + L+     G       YN ++ G+C  G+V  A+ L  ++ 
Sbjct: 55  LSALIRSLCVAGRTADAVRALD---AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                 N ++Y  ++ G C    I  AL++  EM S+   P    Y+ +           
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++ + +   G   DT      I+ +C  G + E LE+ R L +  CE DI SY+ ++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 313 DGLCKSGRLKIAWEL----------FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            GLC + R     EL             + +     D+  Y  +I  +C +G  + A+++
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              M + G+ P+ V +NT++ G    +   K  ELL  M ++N
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN 331



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 8/189 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++T+IN LC+ G    A+ L ++M +NG       C PD
Sbjct: 423 VDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG-------CNPD 475

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I P+V+TY+S+          ++  ++F 
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK  + + A   L  M+  G  PN   Y  L+ G    G
Sbjct: 536 NIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595

Query: 180 RVNRAKELF 188
            +  A++L 
Sbjct: 596 LLCEAQDLL 604


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  GC PN +T++ +I GL R G     L    EM+ G     +  K  +  Y  +I GL
Sbjct: 266 RGSGCLPNDVTHNVVITGLARKGD----LEEAAEMVEG---MRLSKKASSFTYNPLITGL 318

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
             +GFV KA +L L+M+++ I P VVTYN++I G   +     A+  F+EM   G+QP+V
Sbjct: 319 LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDV 378

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           +T++ +++  CK G ++EA  L   +   G+ P    YN L+DG+C  G +  A+ L   
Sbjct: 379 ITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 438

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC  +V +Y+IL+ G      +  A   + EMLSKG++P    YNT       +  
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGA 498

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           + +AF+L + M   G+++DT  Y   IDGLCK G + +A +L   +     + D  +Y+C
Sbjct: 499 IAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTC 558

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI   C+ G L+ A + F  +    L    VTY + IHA C  G +  A+  F  M  +G
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V P+ + +N L+    R   T       H M ER
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLER 652



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 198/387 (51%), Gaps = 8/387 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIY 63
           A+  ++   G EP+++TY+TL++   + G       L +EM   G+G     C P+ V +
Sbjct: 223 AVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSG-----CLPNDVTH 277

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
             +I GL ++G +++A E++  M+         TYN +I G        +A  L +EM +
Sbjct: 278 NVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMEN 336

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ P VVT++ ++  L ++G++E A      M  +G++P+   YN+L++G+C  G +  
Sbjct: 337 EGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKE 396

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  LF  +   G    V +Y+ILI+GYC+  ++E A  L  EM+ +G  P V TY  L  
Sbjct: 397 ALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMK 456

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G      +  A + FDEM   G+  D +AY T I      G I +A  L   + +     
Sbjct: 457 GSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISS 516

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+ LIDGLCK+G L  A +L   +    L  D +TY  +IHA C  G + +A   F
Sbjct: 517 DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFF 576

Query: 364 LDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            DM + G+AP  V +   +   C R N
Sbjct: 577 KDMISDGLAPSAVTYTVFIHAYCRRGN 603



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 6/371 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V+TY+ +I+GL ++G    A   F EM        +  +PD + Y ++++G CK 
Sbjct: 338 GIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM------RAMGLQPDVITYNSLLNGYCKA 391

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A  L   ++   + P V+TYN +I G+C   D  EA+RL  EM++QG  P+V T+
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTY 451

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++M        +  A +  + M+  G++P+ F YNT +      G + +A  L   M  
Sbjct: 452 TILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML 511

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ILI+G CK   +  A  L  +M+  G++P  +TY  L     E   +  
Sbjct: 512 EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLRE 571

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K F +M   G+A     Y  FI   C+ G +  A   FR +     E +  +Y+ LI 
Sbjct: 572 ARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 631

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LC++GR ++A+  FH +    L+ +  TY ++I   C +G  + A   + +M   G+ P
Sbjct: 632 ALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHP 691

Query: 374 DCVAFNTLMLG 384
           D +    L  G
Sbjct: 692 DYLTHKALFKG 702



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 8/309 (2%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M    + PDV   N V+R    A   ++   +  EM+  G++P++VT++ ++D   K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 145 KMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           + ++ + LL+ M     G  PN   +N ++ G    G +  A E+   M  +  K + F+
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFT 310

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI G      ++ A  L  EM ++GI PTVVTYN +  GL +  QVE A   F EM+
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   Y + ++G CK G + EAL LF  LR       + +Y+ LIDG C+ G L+
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT-- 380
            A  L   +     + DV TY I++        +  A + F +M +KG+ PDC A+NT  
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 381 ---LMLGCI 386
              L LG I
Sbjct: 491 RAELTLGAI 499



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 44/385 (11%)

Query: 35  TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
           + + L+ F EM       GV   PD      ++  L      D    +  +M    I P 
Sbjct: 183 STLCLSAFHEM----ASHGVA--PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPS 236

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ--PNVVTFSVIMDELCKNGKMEEASQL 152
           +VTYN+++  F     +++   L  EM  +G    PN VT +V++  L + G +EEA+++
Sbjct: 237 IVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEM 296

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M ++  + ++F YN L+ G    G V +A +L + ME+ G    V +Y+ +I+G  +
Sbjct: 297 VEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQ 355

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           + ++E A   + EM + G++P V+TYN+L  G  +   ++ A  LF +++  G+A     
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-L 331
           Y   IDG C+ G + EA  L   +    C  D+ +Y+ L+ G   +  L +A E F   L
Sbjct: 416 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEML 475

Query: 332 PRGV----------------------------------LIADVVTYNIMIHALCADGKMD 357
            +G+                                  + +D VTYNI+I  LC  G ++
Sbjct: 476 SKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLN 535

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A DL + M   G+ PDC+ +  L+
Sbjct: 536 DAKDLQMKMVHNGLQPDCITYTCLI 560



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 126/277 (45%), Gaps = 29/277 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  L  ++   GC P+V TY+ L+ G        +A   F+EM               I
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 G + K               D V Y  +IDGLCK G ++ AK+L ++M    + 
Sbjct: 491 RAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQ 550

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +TY  +I   C      EA++ F +M+  G+ P+ VT++V +   C+ G +  A   
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGW 610

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++ GV PN   YN L+   C TGR   A   F  M   G   N ++Y++LI+G CK
Sbjct: 611 FRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCK 670

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
               E A+  Y EM   GI P  +T+  LF G  E H
Sbjct: 671 EGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGH 707



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 38/202 (18%)

Query: 220 LSLYSEMLSKG-----------------------------------IKPTVVTYNTLFIG 244
           LS + EM S G                                   I+P++VTYNTL   
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 245 LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             +  + ++   L  EM+  G     +   +   I GL + G + EA E+   +R+ K +
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-K 305

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +Y+ LI GL   G +K A +L   +    ++  VVTYN MIH L   G+++ A   
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F++M A G+ PD + +N+L+ G
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNG 387



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  + + G  P+ +TY+  I+  CR G+   A   F +M+    E GV  +P+ +
Sbjct: 571 EARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML----EEGV--EPNEI 624

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC+ G    A     +M ++ + P+  TY  +I G C   +  +A R + EM
Sbjct: 625 TYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM 684

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
              G+ P+ +T   +       G M  A + LE
Sbjct: 685 HQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLE 716


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 207/392 (52%), Gaps = 6/392 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G EPNV+TY+  I   CR      A +L+EEM+      GV+  PD V  + ++ G
Sbjct: 235 MKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK----GVL--PDVVTLSALVGG 288

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK+G   +A  L  +M+     P+ VTY  +I     A   NE+  L  E++ +GV  +
Sbjct: 289 LCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMD 348

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++ ++ +MD LCK GK++EA  +    +     PN   Y  L+D  C  G V+ A+++  
Sbjct: 349 LIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLS 408

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            ME      NV ++S +ING  K   +  A     EM  +GI P VVTY T+  G F+  
Sbjct: 409 EMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCL 468

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
             E A  ++ EM   GV  + +   + ++GL KNG I +A  LFR +      LD  +Y+
Sbjct: 469 GQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYT 528

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGL K+G L  A+++   L    L+ D V YN+ I+ LC  GK  +A     +M++ 
Sbjct: 529 TLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST 588

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G+ PD V +NT++    R  +T+K ++LL+ M
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L+ ++   G  P+V+T S L+ GLC+ G    A  LF EM        +   P+ V
Sbjct: 262 DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK------IGAAPNHV 315

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID L K    +++  LL ++  + +  D++ Y +++   C     +EAK +F   
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VT++V++D LCK G ++ A Q+L  M +  + PN   ++++++G    G V
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +    M+  G   NV +Y  +I+G  K    E AL +Y EML +G++      ++L
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E+A  LF EM   GV  D   Y T IDGL K G +  A ++ + L     
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC  G+ K A      +    L  D VTYN MI A   +GK  KA  
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+   + P+ + ++TL++G        K   LL+ M
Sbjct: 616 LLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEM 655



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 206/422 (48%), Gaps = 41/422 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+ +L  ++ + G   ++I Y+ L++ LC+ G    A ++F   ++ N        P+ V
Sbjct: 332 ESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN------HTPNGV 385

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +ID LCK G VD A+++L +M++K+I+P+VVT++S+I G        +A     EM
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM 445

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PNVVT+  ++D   K    E A  +   M+  GV  N F+ ++L++G    G++
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKI 505

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ LF  M   G   +  +Y+ LI+G  K   +  A  +  E+  K + P  V YN  
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVF 565

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L  + + + A    +EMQ  G+  D   Y T I    + G   +AL+L   ++    
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLP----------------------RGVLI-- 337
           + ++ +YS LI GL ++G ++ A  L + +                       R  LI  
Sbjct: 626 KPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILE 685

Query: 338 -----------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                      AD+  YN ++  LC +G   KA  +  +M  +G+APD + FN L+LG  
Sbjct: 686 IHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHF 745

Query: 387 RN 388
           ++
Sbjct: 746 KS 747



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 193/403 (47%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF ++   G   + + Y+TLI+GL +TG+   A  + +E+   N        PDAV
Sbjct: 507 KAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN------LLPDAV 560

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC  G   +A+  L +M+   + PD VTYN++I        + +A +L   M
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++PN++T+S ++  L + G +E+A  LL  M   G  P +  +  ++       R 
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   E+   M + G   ++  Y+ L+   C N     A+ +  EM  +GI P  +T+N L
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G F+   ++ AF  +D+M  HG++ +   + T + GL   G I E+  +   ++    
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E    +Y  L+ G  K      A  L+  +     +  V TYN +I      G M +A +
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +M+ +GV P    ++ L+ G  +    ++V + L  M E+
Sbjct: 861 LFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEK 903



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 40/349 (11%)

Query: 94  DVVTYNSVIRGFCYAND-SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           D V+YN V+ GF      + EA  L  EM  +GV  + VT + ++  LC++G+++ A+ L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEA--LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 153 LELMI---------------------QIGVRPNAFV----------------YNTLMDGF 175
            E+M+                     ++G    AF                 YN+L+ G 
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V+ A+++  +M+  G + NV +Y++ I  YC+   ++ A SLY EM+ KG+ P V
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VT + L  GL +  +   A+ LF EM++ G A +   Y   ID L K     E+L L   
Sbjct: 280 VTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGE 339

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +      +D+  Y+ L+D LCK G++  A ++F          + VTY ++I ALC  G 
Sbjct: 340 VVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGN 399

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D A  +  +ME K ++P+ V F++++ G ++     K  + +  M ER
Sbjct: 400 VDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 198/396 (50%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     ++K  G +PNV+TY T+I+G  +      AL+++ EM+    E       +  
Sbjct: 437 KATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV------NKF 490

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I  ++++GL K G ++KA+ L  +M ++ +  D V Y ++I G     +   A ++  E+
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ V ++V ++ LC  GK +EA   LE M   G++P+   YNT++      G+ 
Sbjct: 551 TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKT 610

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M+    K N+ +YS LI G  +   +E A  L +EM S G  PT +T+  +
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  + +   ++ + M   G+ AD   Y T +  LC NG   +A+ +   +     
Sbjct: 671 LQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI G  KSG L  A+  +  +    +  +V T+N ++  L + G++ ++  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +  +M+ +G+ P  + ++ L+ G  + +   + V L
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRL 826



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++ + G  P  +T+  ++    +   + + L + E M+N       +C  D  
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAG-----LCA-DIT 700

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T++  LC  G   KA  +L +M  + I PD +T+N++I G   +   + A   + +M
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQM 760

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PNV TF+ ++  L   G++ E+  +L  M + G+ P+   Y+ L+ G+      
Sbjct: 761 LYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNK 820

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   G    V +Y+ LI+ + K   +  A  L++EM ++G+ PT  TY+ L
Sbjct: 821 VEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDIL 880

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
             G  ++       K   +M+  G +       +      K G   EA  L + L
Sbjct: 881 VSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  +  ++K  G EP+ +TY  L+ G  +  + + A+ L+ EM+ G G       P   
Sbjct: 787 ESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMV-GKGFL-----PKVS 840

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    K G + +AKEL  +M+++ + P   TY+ ++ G+    +  E ++   +M
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDM 900

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            ++G  P+  T S I     K G   EA +LL+ + ++
Sbjct: 901 KEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P V TY+ LI+   + G    A  LF EM N     GV+  P +
Sbjct: 821 VEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQN----RGVL--PTS 874

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  ++ G  K     + ++ L  MK+K  +P   T +S+ R F     S EA+RL 
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 209/407 (51%), Gaps = 26/407 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  L  ++   GCEP+V T++ +I+GLC+ G    A  L + M+               
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLM 312

Query: 47  ----------NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDV 95
                             +  P+ V+Y T+I+G    G  ++AK+LL + M      PD 
Sbjct: 313 HGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
            T+N +I G C       A     EM+ +G +PNV+T+++++D  CK G  EEAS+++  
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G+  N   YN L+   C  G++  A +++  M S GCK ++++++ LI G CKN +
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E AL LY +ML +G+    VTYNTL      +  +++A KL  EM+  G   D   Y  
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I  LCK G   + L L   +   +    I S + LI+  C++G++  A +    + +  
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           L  D+VTYN +I+ LC  G+  +A +LF  ++AKG+ PD V +NTL+
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 172/343 (50%), Gaps = 6/343 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+  +   G EP+  T++ +I+GLC+ G+ + AL   +EM+    E      P+ + YT 
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE------PNVITYTI 412

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK+G  ++A +++  M  K ++ + V YN +I   C      +A +++ EM  +G
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P++ TF+ ++  LCKN KMEEA  L   M+  GV  N   YNTL+  F     + +A 
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  +  +Y+ LI   CK    E  L L  +M  + I P++ + N L    
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               +V  A +   +M + G+  D   Y + I+GLCK G   EAL LF  L+      D 
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
            +Y+ LI   C  G    A +L         I + +T++I+I+
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 167/363 (46%), Gaps = 33/363 (9%)

Query: 72  KEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           K G   +A  LLL M       P   +YN V+      N    A  +F +M+ +G+ P V
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            TF V+M   C   +++ A  LL  M + G  PN+ +Y  L+       RVN A +L   
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE------------------------- 225
           M  MGC+ +V +++ +I+G CK   I  A  L+                           
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 226 ------MLSKGIKPTVVTYNTLFIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFID 278
                 MLSK   P  V YNTL  G     + E A   L+  M   G   D + +   ID
Sbjct: 321 VDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK GY+V ALE    +     E ++ +Y+ LIDG CK G  + A ++ +S+    L  
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSL 440

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           + V YN +I ALC DGK+  A  ++ +M +KG  PD   FN+L+ G  +N++  + + L 
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500

Query: 399 HRM 401
             M
Sbjct: 501 RDM 503



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 29/241 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +A  ++ ++ + GC+P++ T+++LI GLC+      AL L+ +M+               
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519

Query: 47  ----------NGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                       +   G +    C  D + Y  +I  LCK G  +K   L+ QM  + I 
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + + N +I  FC     N+A +   +M+ +G+ P++VT++ +++ LCK G+ +EA  L
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              +   G+ P+A  YNTL+  +C  G  N A +L     S G   N  ++SILIN + K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699

Query: 213 N 213
           N
Sbjct: 700 N 700



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 141/273 (51%), Gaps = 13/273 (4%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + +++D+L   G+ +   +LL+ M   G      ++  +M  +   G   +A  L + M 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 193 SMGCKHNVF-SYS----ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
            + C    F SY+    IL+ G C     + A +++ +MLS+GI PTV T+  +      
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           +++V+ A  L  +M +HG   ++  Y+  I  L +N  + EA++L   + ++ CE D+++
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           ++ +I GLCK+GR+  A +L   +      AD +    ++H LC  GK+D+A      M 
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AML 328

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           +K   P+ V +NTL+ G + +    +  +LL++
Sbjct: 329 SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYK 361



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 8/145 (5%)

Query: 11  KAFGCE--PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           + FG E  P++ + + LIN  CRTG    AL    +MI    + G+   PD V Y ++I+
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI----QRGLT--PDIVTYNSLIN 625

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK G   +A  L   ++ K I+PD VTYN++I  +CY    N+A +L  + +  G  P
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685

Query: 129 NVVTFSVIMDELCKNGKMEEASQLL 153
           N +T+S++++   KN    E   +L
Sbjct: 686 NEITWSILINYFVKNNSDSEQFTIL 710


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 207/402 (51%), Gaps = 5/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   + AFG EP++ TY+ L  GLC+ G    A  L +EM     E   +  PD V
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-----EHLSIVSPDVV 352

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D   K      A  LL +M+DK +   +VT+N V++G C      EA      M
Sbjct: 353 TYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMM 412

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+T++ ++D  CK   + +A  L++ M++ G++ + F  NTL+   C   R 
Sbjct: 413 TEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 472

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL  S    G   +  SY  ++  Y K  + E AL L+ EM  + + P++ TYNTL
Sbjct: 473 EEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTL 532

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  I ++  A    +E+ + G+  D   Y   I   CK G + +A +    +     
Sbjct: 533 IKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYF 592

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ + + L++GLC  G+L+ A +LF S        DV+TYN +I ALC DG +D A  
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            F DMEA+G+ PD   +N ++        + +   +LH++DE
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 205/476 (43%), Gaps = 80/476 (16%)

Query: 3   AAALFTKLKAFG-CEPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPD 59
           AA L    +  G   P++   + +++ L R+  T    +L++F  +I       +   P+
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLI------ALRLHPN 209

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              +  ++   C +G +  A   L  M+   ++PDVVTYN++++  C      EA+ L  
Sbjct: 210 HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLA 269

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M  +G+ P   T++ ++    + G +++A+ ++E M   G  P+ + YN L  G C  G
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG 329

Query: 180 RVNRAKELFVSMESM------------------------------------GCKHNVFSY 203
           +V+ A +L   ME +                                    G K ++ ++
Sbjct: 330 KVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTH 389

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I++ G C+  ++E AL     M  +G+ P V+TYNTL     +   V +AF L DEM R
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRT---------------------------- 295
            G+  DT+   T +  LCK     EA EL R+                            
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 296 -------LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
                  +   K    I +Y+ LI GLC  G+L  A +  + L +  L+ D  TYNI+IH
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A C +G ++KA      M      PD V  NTLM G   + +  K ++L     E+
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 162/372 (43%), Gaps = 65/372 (17%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV---------VCK------- 57
           G  P+VITY+TLI+  C+  +   A  L +EM+    +            +CK       
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475

Query: 58  -------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                        PD V Y T++    KE   + A  L  +M  + + P + TYN++I+G
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKG 535

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            C      EA     E+M +G+ P+  T+++I+   CK G +E+A Q    M++   +P+
Sbjct: 536 LCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPD 595

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
               NTLM+G CL G++ +A +LF S    G K +V +Y+ LI   CK+ +++ AL  ++
Sbjct: 596 VVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFA 655

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV------------------ 266
           +M ++G++P   TYN +   L E  + E A  +  ++   G                   
Sbjct: 656 DMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVK 715

Query: 267 ------------------AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
                               D  +Y   +  LC  G + EA  +   +      +D  +Y
Sbjct: 716 TGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTY 775

Query: 309 SCLIDGLCKSGR 320
             L++GL K  +
Sbjct: 776 ITLMEGLIKRQK 787



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 42/182 (23%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF      G + +VITY+TLI  LC+ G    AL+ F +M    G      +PDA 
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM-EARG-----LQPDAF 667

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-------------------------KDKNINPD-- 94
            Y  ++  L + G  ++A+ +L ++                         KD  +  D  
Sbjct: 668 TYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCE 727

Query: 95  ---------VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                      +YN  ++  C      EAK +  EMM +G+  +  T+  +M+ L K  K
Sbjct: 728 SGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787

Query: 146 ME 147
            +
Sbjct: 788 RQ 789


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 220/414 (53%), Gaps = 16/414 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF +L      P  I ++ ++  L ++ H    L L ++M     EF  + KP+ V
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 98

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY----------ANDS 111
               +I+  C+ G +  A  +L ++      P+ +T N++I+G C               
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            +A  LF +M+ + + P+V TF++++D  CK G+++EA  +L +M+  G++P    YN+L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           MDG+ L  +VN+AK +F +M  +G   ++ SYSILING+CK K ++ A+ L  EM  K I
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTY++L  GL +  ++  A KL DEM   G   +   Y + +D LCKN  +  A+ 
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   ++    + ++ +Y+ LI GLC+SG+L+ A ++F  L       +V TY +MI   C
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G  D+A  L   ME  G  P+   +  ++L   + +E     +LL  M E N
Sbjct: 399 DKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 202/382 (52%), Gaps = 32/382 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIV-----ALNLFEEMINGNGE 51
            A ++ TK+   G +PN IT +TLI GLC  G     H IV     A++LF +MI  N  
Sbjct: 115 SAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILEN-- 172

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 PD   +T ++DG CKEG V +AK +L  M  + I P VVTYNS++ G+      
Sbjct: 173 ----INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQV 228

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           N+AK +F  M   GV P++ ++S++++  CK   M+EA +LL+ M    + PN   Y++L
Sbjct: 229 NKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSL 288

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C +G+++ A +L   M   G   N+ +YS +++  CKN +++ A++L ++M ++GI
Sbjct: 289 IDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGI 348

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P + TY  L  GL +  ++E A K+F+++   G   + + Y   I G C  G   EAL 
Sbjct: 349 QPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALT 408

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    C  + ++Y  +I  L K    ++A +         L+ +++  N       
Sbjct: 409 LLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEK---------LLCEMIETNF------ 453

Query: 352 ADGKMDKAHDLFLDMEAKGVAP 373
            DG++   +DL   +   G +P
Sbjct: 454 -DGRVALTNDLIASIWVTGSSP 474



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 45/339 (13%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VD A  L  ++  +N  P  + +N ++     +   +    L  +M  +G++PN+V  ++
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR----------AK 185
           +++  C+ G +  A  +L  ++++G +PN    NTL+ G CL G+++           A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF  M       +V++++IL++G+CK   ++ A ++ + M+ +GIKP VVTYN+L  G 
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F + QV +                                   A  +F T+  L    DI
Sbjct: 223 FLVKQVNK-----------------------------------AKSIFNTMAQLGVSPDI 247

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
           +SYS LI+G CK   +  A EL   +    +I +VVTY+ +I  LC  GK+  A  L  +
Sbjct: 248 QSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDE 307

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  +G  P+ V +++++    +N++    + LL +M  +
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 228/473 (48%), Gaps = 77/473 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+ A GC P + TY+ L+NGLC+ G    A++L  ++++ NG     C PD V
Sbjct: 4   EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 57

Query: 62  IYTTIIDGLCKE-----------------------------------GFVDKAKELLLQM 86
            YT++IDGL KE                                   G + +A  +   M
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                 PDVVT +++I G   A     A R+F  M  +G+ PN V +S ++  LCK  KM
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A ++L  M +    P+   YN L+DG C +G V  A+  F  M   GCK +V++Y+IL
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 207 INGYC------------------------------------KNKEIEGALSLYSEMLSKG 230
           I+G+C                                    KNK+IE A++L  ++ + G
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             PT+ TYN L  GL ++ ++E A  L  ++  +G   D   Y + IDGL K     EA 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           +LF+ + +    LD   Y+ LI  L ++G++  A  ++ ++     + DVVT + MI  L
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              G++  A  +F  MEA+G+AP+ V ++ L+ G  +  +    +E+L +M +
Sbjct: 418 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 470



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 206/439 (46%), Gaps = 42/439 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  ++A G  PN + YS LI+GLC+      AL +  +M          C PD + 
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA------FCTPDTIT 198

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR-LFIEM 121
           Y  +IDGLCK G V+ A+    +M +    PDV TYN +I GFC A +++ A   L  E 
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   ++ T++ I+D L KN K+EEA  L+E +   G  P    YN L++G C  GR+
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK--------------------------- 214
             A +L   +   GC  +V +Y+ LI+G  K K                           
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTAL 378

Query: 215 --------EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                   +I  A S+Y  M S G  P VVT +T+  GL +  ++  A ++F  M+  G+
Sbjct: 379 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 438

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A +   Y   I GLCK   +  ALE+   ++   C  D  +Y+ LIDGLCKSG ++ A  
Sbjct: 439 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 498

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            F  +       DV TYNI+I   C  G  D A  +F DM +   + + V +  L+ G  
Sbjct: 499 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLC 558

Query: 387 RNNETSKVVELLHRMDERN 405
           +  + +K       M ER 
Sbjct: 559 KRRQLTKASLYFQHMKERG 577



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 167/330 (50%), Gaps = 7/330 (2%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +++A  L+ ++      P + TYN+++ G C      EA  L  +++D G  P+VVT++ 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D L K  +  EA +L + M   G+  +   Y  L+     TG++ +A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V + S +I+G  K   I  A+ ++  M ++G+ P  V Y+ L  GL +  +++ A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  +M++     DT  Y   IDGLCK+G +  A   F  +    C+ D+ +Y+ LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 316 CKSGRLKIAWELFHSLPRGVLI----ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           CK+G    A    HSL +   I     D+ TY  ++  L  + K+++A  L   + A G 
Sbjct: 242 CKAGNTDAAS---HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            P    +N L+ G  +     + ++LL ++
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKI 328



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 120/247 (48%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+EEA  L+E +   G  P    YN L++G C  GR+  A +L   +   GC  +V +Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G  K K    A  L+ EM  +G+    V Y  L   L +  ++ +A  ++  M  H
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D     T IDGL K G I  A+ +F+++       +   YS LI GLCK+ ++  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            E+   + +     D +TYN++I  LC  G ++ A   F +M   G  PD   +N L+ G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 385 CIRNNET 391
             +   T
Sbjct: 241 FCKAGNT 247



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A++++  + + GC P+V+T ST+I+GL + G    A+ +F+ M    G       P+ V
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-EARG-----LAPNEV 443

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ +I GLCK   +D A E+L QMK     PD +TYN +I G C + D   A+  F EM
Sbjct: 444 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 503

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+V T+++++   CK G  + A  + + M       N   Y  L+ G C   ++
Sbjct: 504 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQL 563

Query: 182 NRAKELFVSMESMG 195
            +A   F  M+  G
Sbjct: 564 TKASLYFQHMKERG 577



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 103/189 (54%)

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +IE A++L  ++ + G  PT+ TYN L  GL ++ ++E A  L  ++  +G   D   Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + IDGL K     EA +LF+ + +    LD   Y+ LI  L ++G++  A  ++ ++   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
             + DVVT + MI  L   G++  A  +F  MEA+G+AP+ V ++ L+ G  +  +    
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 395 VELLHRMDE 403
           +E+L +M +
Sbjct: 181 LEMLAQMKK 189



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++E A  L +++  +G       Y   ++GLCK G + EA++L R +    C  D+ +Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGL K  R   A++LF  +    L  D V Y  +I  L   GK+ +A  ++  M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  PD V  +T++ G  +       V +   M+ R 
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 156


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 211/392 (53%), Gaps = 7/392 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +++  GC PNV+TY+TLI+  C+ G    A  L + M +         +P+ + Y  I
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG------MQPNLISYNVI 290

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I+GLC+EG + +A E+L +M  K   PD VTYN+++ G+C   + ++A  +  EM+  GV
Sbjct: 291 INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+VVT++ +++ +CK   +  A +  + M   G+RPN   Y TL+DGF   G +N A  
Sbjct: 351 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 410

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +   M   G   +V +Y+  I+G+C  + +E AL +  EM+ KG+ P VV+Y+T+  G  
Sbjct: 411 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 470

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              +++RAF++  EM   GV+ D   Y + I GLC+   + EA +L + +  +    D  
Sbjct: 471 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI+  C  G L  A  L   +     + D VTY+++I+ L    +  +A  L   +
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
             +   P  V ++TL+  C  N E   VV L+
Sbjct: 591 IYEESVPSDVTYDTLIENC-SNIEFKSVVALI 621



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 200/401 (49%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  ++ ++      PNV TY+ LI G C  G     L  F EM   NG     C P+ 
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNG-----CLPNV 249

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+ID  CK G +D+A  LL  M  K + P++++YN +I G C      EA  +  E
Sbjct: 250 VTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEE 309

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+ VT++ +++  CK G   +A  +   M++ GV P+   Y  L++  C    
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +NRA E F  M   G + N  +Y+ LI+G+ +   +  A  + +EM   G  P+VVTYN 
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              G   + ++E A  +  EM   G+A D  +Y T I G C+ G +  A ++ + +    
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +YS LI GLC+  RL  A +L   +    L  D  TY  +I+A C +G ++KA 
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  KG  PD V ++ L+ G  +   T +   LL ++
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 208/447 (46%), Gaps = 59/447 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + + G +PN+I+Y+ +INGLCR G    A  + EEM    G  G    PD V
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEV 320

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++G CKEG   +A  +  +M    ++P VVTY ++I   C A + N A   F +M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  T++ ++D   + G + EA ++L  M + G  P+   YN  + G C+  R+
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G   +V SYS +I+G+C+  E++ A  +  EM+ KG+ P  VTY++L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E+ ++  A  L  EM   G+  D + Y T I+  C  G + +AL L   +     
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF------HSLPRGVLI------------------ 337
             D  +YS LI+GL K  R + A  L        S+P  V                    
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 620

Query: 338 ------------ADVV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
                       AD V               YN++IH  C  G + KA +L+ +M   G 
Sbjct: 621 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGF 680

Query: 372 APDCVAFNTLMLGCIR---NNETSKVV 395
            P  V   TL+    +   N E S+V+
Sbjct: 681 VPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 182/346 (52%), Gaps = 2/346 (0%)

Query: 58  PDAVIYTTIIDGLCK-EGFVD-KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           P  + Y +++D + +  G V   A+E+  +M    ++P+V TYN +IRGFC   +  +  
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
             F EM   G  PNVVT++ ++D  CK G+++EA  LL+ M   G++PN   YN +++G 
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G +  A E+   M   G   +  +Y+ L+NGYCK      AL +++EM+  G+ P+V
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTY  L   + +   + RA + FD+M+  G+  +   Y T IDG  + G + EA  +   
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +        + +Y+  I G C   R++ A  +   +    L  DVV+Y+ +I   C  G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +D+A  +  +M  KGV+PD V +++L+ G       ++  +L   M
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 520



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 2/352 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE- 113
           V    + ++  ++        +D+A   +   K     P V++YNSV+     +  S + 
Sbjct: 137 VYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKL 196

Query: 114 -AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            A+ ++ EM+   V PNV T+++++   C  G++++       M + G  PN   YNTL+
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI 256

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D +C  GR++ A  L  SM S G + N+ SY+++ING C+   ++ A  +  EM  KG  
Sbjct: 257 DAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VTYNTL  G  +     +A  +  EM R+GV+     Y   I+ +CK   +  A+E 
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +RI     + R+Y+ LIDG  + G L  A+ + + +        VVTYN  IH  C 
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 436

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M++A  +  +M  KG+APD V+++T++ G  R  E  +  ++   M E+
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 201/424 (47%), Gaps = 58/424 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +  ++   G  P+V+TY+ LIN +C+  +   A+  F++M I G        +P+ 
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG-------LRPNE 389

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTT+IDG  ++G +++A  +L +M +   +P VVTYN+ I G C      EA  +  E
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+VV++S I+   C+ G+++ A Q+ + M++ GV P+A  Y++L+ G C   R
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +L   M  MG   + F+Y+ LIN YC   ++  AL L+ EM+ KG  P  VTY+ 
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569

Query: 241 LFIGLFEIHQVERA----FKL-FDEMQRHGVAADTW----------AYRTFIDGLCKNGY 285
           L  GL +  +   A    FKL ++E     V  DT           +    I G C  G 
Sbjct: 570 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 629

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  +F ++     +     Y+ +I G C+ G L  A+ L+  +     +   VT   
Sbjct: 630 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 689

Query: 346 MIHAL-------------------C----------------ADGKMDKAHDLFLDMEAKG 370
           +I AL                   C                 +G M+   ++  DM   G
Sbjct: 690 LIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDG 749

Query: 371 VAPD 374
           + P+
Sbjct: 750 LLPN 753


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 204/382 (53%), Gaps = 11/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   G   + +TY  L++GLCR G    A  L  ++ N          P+ V
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----------PNTV 342

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +Y T+I G    G  ++AK+LL   M      PD  T+N +I G         A  L  E
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNE 402

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +  +PNV+T++++++  CK G++EEA++++  M   G+  N   YN L+   C  G 
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +LF  M   GCK ++++++ LING CKN ++E ALSLY +M  +G+    VTYNT
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L         +++AFKL DEM   G   D   Y   I  LCK G + + L LF  +    
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               I S + LI GLC++G++  A +    +    L  D+VTYN +I+ LC  G + +A 
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           +LF  ++++G+ PD + +NTL+
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLI 664



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 209/404 (51%), Gaps = 11/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +    CEP+V T++ +I+GLCR G    A  L + M+            DA+
Sbjct: 258 EALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRG------FSTDAL 311

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL-FIE 120
            Y  ++ GLC+ G VD+A+ LL    +K  NP+ V YN++I G+  +    EAK L +  
Sbjct: 312 TYGYLMHGLCRMGQVDEARALL----NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNN 367

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +P+  TF++++D L K G +  A +LL  M+     PN   Y  L++GFC  GR
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+  SM + G   N   Y+ LI   CK+  IE AL L+ EM  KG KP + T+N+
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + H++E A  L+ +M   GV A+T  Y T +        I +A +L   +    
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +Y+ LI  LCK+G ++    LF  +    +   +++ NI+I  LC  GK++ A 
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               DM  +G+ PD V +N+L+ G  +     +   L +++   
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 220/438 (50%), Gaps = 46/438 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  + + G  P V T+  ++  LC       A +L  +M          C P++VI
Sbjct: 189 APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG------CVPNSVI 242

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I  LC+   V +A +LL  M      PDV T+N VI G C A   +EA +L   M+
Sbjct: 243 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   + +T+  +M  LC+ G+++EA  LL  +      PN  +YNTL+ G+  +GR  
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFE 358

Query: 183 RAKE-LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            AK+ L+ +M   G + + ++++I+I+G  K   +  AL L +EM++K  +P V+TY  L
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++E A ++ + M   G++ +T  Y   I  LCK+G I EAL+LF  +    C
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH------------- 348
           + DI +++ LI+GLCK+ +++ A  L+H +    +IA+ VTYN ++H             
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538

Query: 349 ----------------------ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                                 ALC  G ++K   LF +M  KG+ P  ++ N L+ G  
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598

Query: 387 RNNETSKVVELLHRMDER 404
           R  + +  ++ L  M  R
Sbjct: 599 RTGKVNDALKFLQDMIHR 616



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+  +   G EP+  T++ +I+GL + G+ + AL L  EM+    E      P+ + YT 
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE------PNVITYTI 417

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G CK+G +++A E++  M  K ++ + V YN +I   C   +  EA +LF EM  +G
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P++ TF+ +++ LCKN KMEEA  L   M   GV  N   YNTL+  F +   + +A 
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  +  +Y+ LI   CK   +E  L L+ EML KGI PT+++ N L  GL
Sbjct: 538 KLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               +V  A K   +M   G+  D   Y + I+GLCK G++ EA  LF  L+      D 
Sbjct: 598 CRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
            +Y+ LI   C  G    A  L +       I + VT++I+I+
Sbjct: 658 ITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 192/412 (46%), Gaps = 44/412 (10%)

Query: 34  HTIVALNLFEEMINGNGEFGVVCKP-----------DAVIYTTIIDGLCKEGFVDKAKEL 82
           HT  A  L  + +   G+F V+ K               ++  I+    K G   +A  L
Sbjct: 97  HTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRL 156

Query: 83  LLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL M    + +P   +YN V+      +    A  +F +M+ +GV P V TF V+M  LC
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
              +++ A  LL  M + G  PN+ +Y TL+   C   RV+ A +L   M  M C+ +V 
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK----- 256
           +++ +I+G C+   I  A  L   ML +G     +TY  L  GL  + QV+ A       
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336

Query: 257 ---------------------------LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
                                      L++ M   G   D + +   IDGL K GY+V A
Sbjct: 337 PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           LEL   +   + E ++ +Y+ LI+G CK GRL+ A E+ +S+    L  + V YN +I A
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC DG +++A  LF +M  KG  PD   FN+L+ G  +N++  + + L H M
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDM 508



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  ++ A   EPNVITY+ LING C+ G     L    E++N     G+    + 
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGR----LEEAAEIVNSMSAKGLSL--NT 447

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LCK+G +++A +L  +M  K   PD+ T+NS+I G C  +   EA  L+ +
Sbjct: 448 VGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHD 507

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV  N VT++ ++        +++A +L++ M+  G   +   YN L+   C TG 
Sbjct: 508 MFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGA 567

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +   LF  M   G    + S +ILI+G C+  ++  AL    +M+ +G+ P +VTYN+
Sbjct: 568 VEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNS 627

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL ++  V+ A  LF+++Q  G+  D   Y T I   C  G   +A
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            LF ++   G  P +I+ + LI+GLCRTG    AL   ++MI+          PD V Y 
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG------LTPDIVTYN 626

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I+GLCK G V +A  L  +++ + I PD +TYN++I   C+    N+A  L  + +D 
Sbjct: 627 SLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDS 686

Query: 125 GVQPNVVTFSVIMDELCK 142
           G  PN VT+S++++ + K
Sbjct: 687 GFIPNEVTWSILINYIVK 704



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 44/276 (15%)

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++D+L   G  +   +LL+ M   G+     ++  +M  +   G   +A  L + M  +
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 195 -GCKHNVFSYS----ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
             C     SY+    IL++G C       A +++ +MLS+G+ PTV T+  +   L  + 
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRV----APNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A  L  +M +HG   ++  Y+T                                  
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQT---------------------------------- 245

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI  LC++ R+  A +L   +       DV T+N +IH LC  G++ +A  L   M  +
Sbjct: 246 -LIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLR 304

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G + D + +  LM G  R  +  +   LL+++   N
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPN 340


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 195/337 (57%), Gaps = 6/337 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P++ T+S LI      G    A+ +F EM     + GV  KPD V YTT
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPDVVTYTT 438

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   Y+ +I+GFC      +AK L +E+M+ G
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ ++V FS I++ LCK G++ +A  + +L + +G  P+A VY+ LMDG+CL G++ +A 
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV  Y  L+NGYCK   I+  LSL+ EML KGIKP+ + YN +  GL
Sbjct: 559 RVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F   +   A   F EM   G+A +   Y   + G  KN    EA+ LF+ LR +  ++DI
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDI 678

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
            + + +I G+ ++ R++ A +LF S+ R  L+  VVT
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 215/434 (49%), Gaps = 39/434 (8%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +    GC P+V +YS L+  LC  G +  A +L   M  G    G VC PD V YTT
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYTT 228

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA----------------- 108
           +ID   KEG V+KA +L  +M  + I PD+VTY+SV+   C A                 
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 109 ------------------NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
                                 EA R+F EM    + P+VVT +++M  LCK GK++EA 
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            + + M   G  P+ F Y  +++G+   G +    +LF  M   G   +++++S+LI  Y
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                ++ A+ +++EM   G+KP VVTY T+   L  I +++ A + F++M   GVA D 
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           +AY   I G C +G +++A EL   +      LDI  +S +I+ LCK GR+  A  +F  
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                   D V Y++++   C  GKM+KA  +F  M + G+ P+ V + TL+ G  +   
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588

Query: 391 TSKVVELLHRMDER 404
             + + L   M ++
Sbjct: 589 IDEGLSLFREMLQK 602



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 203/398 (51%), Gaps = 8/398 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +F +++     P+V+T + L+  LC+ G    A ++F+ M + G         PD 
Sbjct: 311 EAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQ-------NPDV 363

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +++G   +G +    +L   M    I PD+ T++ +I+ +      ++A  +F E
Sbjct: 364 FSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNE 423

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D GV+P+VVT++ ++  LC+ GKM++A +    MI  GV P+ + Y+ L+ GFC  G 
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +AKEL + + + G + ++  +S +IN  CK   I  A +++   ++ G  P  V Y+ 
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E L LFR +    
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +     Y+ +IDGL  +GR   A   FH +    +  +  TYNI++     +   D+A 
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAI 663

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            LF ++ A  V  D +  NT++ G  +     +  +L 
Sbjct: 664 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 3/350 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           V  P +  Y  ++D   +    + A     Q+    +  D++  N +++GFC A  ++EA
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 115 KRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV--RPNAFVYNTL 171
             + +    + G  P+V ++S+++  LC  GK  +A  LL +M + G    P+   Y T+
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D F   G VN+A +LF  M   G   ++ +YS +++  CK + +  A +   +M++KG+
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P   TYN L  G     Q + A ++F EM+RH +  D       +  LCK G I EA +
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F T+ +     D+ SY  +++G    G L    +LF  +    +  D+ T++++I A  
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G +DKA  +F +M   GV PD V + T++    R  +    +E  ++M
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 190/404 (47%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++   G  P+  TY+ LI G   TG    A+ +F+EM   +        PD V
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               ++  LCK G + +A+++   M  K  NPDV +Y  ++ G+       +   LF  M
Sbjct: 330 TLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P++ TFSV++      G +++A  +   M   GV+P+   Y T++   C  G++
Sbjct: 390 LGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKM 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E F  M   G   + ++Y  LI G+C +  +  A  L  E+++ G++  +V ++++
Sbjct: 450 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSI 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L ++ ++  A  +FD     G   D   Y   +DG C  G + +AL +F  +     
Sbjct: 510 INNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 569

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++  Y  L++G CK GR+     LF  + +  +    + YNI+I  L   G+   A  
Sbjct: 570 EPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            F +M   G+A +   +N ++ G  +N    + + L   +   N
Sbjct: 630 KFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 6/237 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  ++   G   +++ +S++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN------VGQHPDA 538

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DG C  G ++KA  +   M    I P+VV Y +++ G+C     +E   LF E
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I+D L   G+   A      M + G+  N   YN ++ GF     
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            + A  LF  + +M  K ++ + + +I G  + + +E A  L++ +   G+ P VVT
Sbjct: 659 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 43/194 (22%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  D    
Sbjct: 94  AVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIA 153

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 154 NHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 179

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA---PDCVAFNTLMLGCIRNNE 390
              + DV +Y+I++ +LC  GK  +A DL L M A+G A   PD VA+ T++    +  +
Sbjct: 180 LGCVPDVFSYSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238

Query: 391 TSKVVELLHRMDER 404
            +K  +L   M +R
Sbjct: 239 VNKACDLFKEMVQR 252


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 230/437 (52%), Gaps = 42/437 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   + + GCE + + Y T+I G     H + A  LFEEM+      G+   PD + 
Sbjct: 165 ARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEML------GLGICPDIMA 218

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I  LC++G V +++ LL ++  + ++P++ T N  I+GFC     NEA RL ++ +
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL-LDGV 277

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+V+T++ ++  LCKN K+ EA   L  M+  G  P+ F YN+++DG+C  G + 
Sbjct: 278 GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++       G   +  +Y  LING C++ +I+ A+++++E + KG+KP +V  NTL 
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL---------- 292
            GL +   + +A KL +EM  +G + D W Y   I+GLCK G + +A  L          
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457

Query: 293 -----FRTLRILKCE--------------------LDIRSYSCLIDGLCKSGRLKIAWEL 327
                F TL    C+                     D+ +Y+ +++GLCK+G+ +     
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +     + +++TYNI+  + C   K+++A +L  +M+ KG+ PD V F TLM G   
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577

Query: 388 NNETSKVVELLHRMDER 404
           N +     +L  R+DE+
Sbjct: 578 NGDLDGAYQLFKRVDEQ 594



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 197/424 (46%), Gaps = 42/424 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+VITY+TLI GLC+    + A +   +M+N   E      PD   Y +IIDG CK 
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE------PDGFTYNSIIDGYCKL 333

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV-- 131
           G +  A ++L     K   PD  TY S+I G C   D + A  +F E M++G++PN+V  
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 132 ---------------------------------TFSVIMDELCKNGKMEEASQLLELMIQ 158
                                            T++++++ LCK G + +A  L+   I 
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P+ F +NTL+DG+C   +++ A E+   M + G   +V +Y+ ++NG CK  + E 
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            +  +  M+ KG  P ++TYN L     +  +VE A  L +EMQ  G+  D   + T + 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 279 GLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           G C NG +  A +LF R     K    I +Y+ +I+       + +A +LF+ +      
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D  TY +MI   C  G ++  +   L    KG+ P    F  ++          + V +
Sbjct: 634 PDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693

Query: 398 LHRM 401
           +H M
Sbjct: 694 IHLM 697



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 187/362 (51%), Gaps = 7/362 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  L  K+   G  PN+ T +  I G C+      A+ L + +  G         PD +
Sbjct: 234 ESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG-------LTPDVI 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GLCK   V +A+  L +M ++   PD  TYNS+I G+C       A ++  + 
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+  T+  +++ LC++G ++ A  +    ++ G++PN  + NTL+ G    G +
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M   GC  ++++Y+++ING CK   +  A +L  + ++KG  P V T+NTL
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A ++ D M  HGV+ D   Y + ++GLCK G   + +  F+ +    C
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L +  CK+ +++ A  L   +    L  DVV +  ++   C +G +D A+ 
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQ 586

Query: 362 LF 363
           LF
Sbjct: 587 LF 588



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 197/378 (52%), Gaps = 8/378 (2%)

Query: 1   MEAAALFTKLKAF-GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           M+ A    +  AF G  P+  TY +LINGLC+ G    A+N+F E +    E G+  KP+
Sbjct: 336 MQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM----EKGL--KPN 389

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V+  T++ GL ++G + +A +L+ +M +   +PD+ TYN VI G C     ++A  L I
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P+V TF+ ++D  CK  K++ A ++++ M   GV P+   YN++++G C  G
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +       F  M   GC  N+ +Y+IL   +CK +++E AL+L  EM +KG+ P VV + 
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFG 569

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA-YRTFIDGLCKNGYIVEALELFRTLRI 298
           TL  G  +   ++ A++LF  +      + T A Y   I+       +  A +LF  +  
Sbjct: 570 TLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCE 629

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  +Y  +IDG CK+G +   +          LI  + T+  +++ LC   ++ +
Sbjct: 630 NGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHE 689

Query: 359 AHDLFLDMEAKGVAPDCV 376
           A  +   M  KG+ P+ V
Sbjct: 690 AVGIIHLMVHKGIVPEVV 707



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 193/406 (47%), Gaps = 42/406 (10%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G    A+++FE M   N      C+P    Y  I++ L +  + D+A ++ ++M+DK 
Sbjct: 88  RKGKIQEAVDVFERMDFFN------CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I PDV T+   ++ FC  +  + A+RL   M  QG + + V +  ++    +     EA 
Sbjct: 142 IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAH 201

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L E M+ +G+ P+   +N L+   C  G V  ++ L   +   G   N+F+ +I I G+
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+   +  A+ L  + + +G+ P V+TYNTL  GL +  +V  A     +M   G   D 
Sbjct: 262 CQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDG 320

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-- 328
           + Y + IDG CK G +  A ++ R         D  +Y  LI+GLC+ G +  A  +F  
Sbjct: 321 FTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNE 380

Query: 329 -------------HSLPRGV----LI----------------ADVVTYNIMIHALCADGK 355
                        ++L +G+    LI                 D+ TYN++I+ LC  G 
Sbjct: 381 AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGC 440

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  A +L +D  AKG  PD   FNTL+ G  +  +    +E++ RM
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRM 486



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 173/342 (50%), Gaps = 1/342 (0%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   +    ++G + +A ++  +M   N  P V +YN+++         ++A ++++ M
Sbjct: 78  VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+V TF++ M   C+  +   A +LL  M   G   +A  Y T++ GF      
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ELF  M  +G   ++ +++ LI+  C+   ++ +  L +++L +G+ P + T N  
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A +L D + R G+  D   Y T I GLCKN  +VEA    R +     
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ +IDG CK G ++ A ++         + D  TY  +I+ LC DG +D+A +
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +F +   KG+ P+ V  NTL+ G  +     + ++L++ M E
Sbjct: 377 VFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE 418



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 79/313 (25%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  ++   GC P++ TY+ +INGLC+ G    A NL  + I   G       PD 
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI-AKGHL-----PDV 460

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG---------------- 104
             + T+IDG CK+  +D A E++ +M +  ++PDV+TYNS++ G                
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 105 -------------------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                              FC A    EA  L  EM ++G+ P+VV F  +M   C NG 
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580

Query: 146 MEEASQLLEL------------------------------------MIQIGVRPNAFVYN 169
           ++ A QL +                                     M + G  P+++ Y 
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            ++DGFC TG +N      +     G   ++ ++  ++N  C  + +  A+ +   M+ K
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700

Query: 230 GIKPTVVTYNTLF 242
           GI P VV  NT+F
Sbjct: 701 GIVPEVV--NTIF 711



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 183 RAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEM---LSKGIKPTVVTY 238
           +A E+F S++   G KH + +Y  +I     + E E    + +E    +  G+   V   
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--- 78

Query: 239 NTLFIGLFEIH----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
              +IG    +    +++ A  +F+ M          +Y   ++ L +  Y  +A +++ 
Sbjct: 79  ---YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYM 135

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      D+ +++  +   C++ R   A  L +++P     +  V Y  +I     + 
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              +AH+LF +M   G+ PD +AFN L+    R     +   LL+++ +R
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKR 245


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 214/400 (53%), Gaps = 28/400 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P++ T++ LI      G    A+ +F EM     + GV  KP  V Y T
Sbjct: 51  LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM----RDHGV--KPHVVTYMT 104

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+ G +D A E   QM D+ + PD   Y+ +I+GFC      +AK L  E+M+ G
Sbjct: 105 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 164

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ ++V F  I++ LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A 
Sbjct: 165 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 224

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F +M S G + NV                        EML KGIKP+ + YN +  GL
Sbjct: 225 RVFDAMVSAGIEPNVV----------------------GEMLQKGIKPSTILYNIIIDGL 262

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           FE  +   A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  ++DI
Sbjct: 263 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 322

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +I G+ ++ R++ A +LF S+ R  L+   VTY+IMI  L  +G +++A D+F  
Sbjct: 323 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSS 382

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M+  G  PD    N ++   ++ NE  +    L ++DERN
Sbjct: 383 MQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 422



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 19/333 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G +P+V+TY T+I  LCR G    A+  F +MI+     GVV  PD  
Sbjct: 82  KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ----GVV--PDKY 135

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G + KAKEL+ ++ +  +  D+V + S+I   C      +A+ +F   
Sbjct: 136 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 195

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-------------QIGVRPNAFVY 168
           ++ G+ P+ V ++++MD  C  GKME+A ++ + M+             Q G++P+  +Y
Sbjct: 196 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILY 255

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++DG    GR   AK  F  M   G   N  +YSI++ G  KN+  + A+ L+ E+ +
Sbjct: 256 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 315

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             +K  ++T NT+  G+F+  +VE A  LF  + R G+      Y   I  L K G + E
Sbjct: 316 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 375

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           A ++F +++   CE D R  + ++  L K   +
Sbjct: 376 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 408



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 127/241 (52%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M  LCK GK++E   + + M   G  P+ F Y  +++G+   G +    +LF  M   G 
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +++++++LI  Y     ++ A+ +++EM   G+KP VVTY T+   L  I +++ A +
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            F++M   GV  D +AY   I G C +G +++A EL   +      LDI  +  +I+ LC
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 180

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GR+  A  +F       L  D V YN+++   C  GKM+KA  +F  M + G+ P+ V
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 377 A 377
            
Sbjct: 241 G 241



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 19/306 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L +++   G   +++ + ++IN LC+ G  + A N+F+  +N      V   PDA
Sbjct: 151 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 204

Query: 61  VIYTTIIDGLCKEGFVDKA-------------KELLLQMKDKNINPDVVTYNSVIRGFCY 107
           V+Y  ++DG C  G ++KA               ++ +M  K I P  + YN +I G   
Sbjct: 205 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFE 264

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A  +  AK  F EM + G+  N  T+S+++  L KN   +EA  L + +  + V+ +   
Sbjct: 265 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 324

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            NT++ G   T RV  AK+LF S+   G      +YSI+I    K   +E A  ++S M 
Sbjct: 325 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 384

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           + G +P     N +   L + +++ RA     ++     + +       +D     G   
Sbjct: 385 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 444

Query: 288 EALELF 293
           E +   
Sbjct: 445 EQIRFL 450


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/393 (33%), Positives = 205/393 (52%), Gaps = 6/393 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           ++KA G EP+V+T++TLI   C+      A  L+E M+      GV+  PD V  + ++D
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS----GVL--PDVVTLSALVD 302

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLC++G   +A  L  +M    + P+ VTY + I         NE+  L  EM+ +GV  
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++V ++ +MD L K GK+EEA  +L   +   + PN   Y  L+D  C  G ++ A+++ 
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
           + ME      NV ++S ++NG  K   I  A     +M   GI P VVTY TL  G F+ 
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
              E A  ++ +M   GV A+ +   + ++GL KNG I EA  LF+ +      LD  +Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + L+DGL K+G +  A ++   L    L  D V YN+ I+ LC  GK  +A     +M  
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G+ PD   +NT++    R   TSK ++LL+ M
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 202/396 (51%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY T I+ L +      +L L  EM++     GV    D V
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS----RGVAM--DLV 365

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YTT++D L KEG +++AK++L      NI P+ VTY  ++   C A + + A+++ ++M
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V PNVVTFS I++ L K G + +A+  +  M   G+ PN   Y TL+DGF      
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +++  M   G + N F    L+NG  KN  IE A +L+ +M  +G+    V Y TL
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  A K+  E+    ++ D   Y  FI+ LC+ G   EA    + +R    
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ +I   C+ G    A +L + +    +  +++TY  ++  L   G ++KA  
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKY 665

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L  +M + G  P  + +  ++  C  +     ++E+
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEV 701



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 197/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+  +   G  P+V+T S L++GLCR G    A  LF EM     + GV   P+ V
Sbjct: 277 EAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM----DKIGVA--PNHV 330

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ID L K   V+++  LL +M  + +  D+V Y +V+          EAK +    
Sbjct: 331 TYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHA 390

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PN VT++V++D  C+ G ++ A Q+L  M +  V PN   ++++++G    G +
Sbjct: 391 LSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCI 450

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A      M+  G   NV +Y  LI+G+ K +  E AL +Y +ML +G++      ++L
Sbjct: 451 AKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSL 510

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +E A  LF +M   G+  D   Y T +DGL K G +  AL++ + L     
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC+ G+   A      +    L  D  TYN MI A C +G   KA  
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALK 630

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+   + P+ + + TL++G +      K   LL+ M
Sbjct: 631 LLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEM 670



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 47/406 (11%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN +TY+ L++  CR G+    ++  E+M+    E  V   P+ V +++I++GL K G +
Sbjct: 397 PNCVTYTVLVDAHCRAGN----IDGAEQMLLQMEEKSV--SPNVVTFSSILNGLVKRGCI 450

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGF--CYANDS----------------------- 111
            KA   + +MKD  I P+VVTY ++I GF  C   ++                       
Sbjct: 451 AKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSL 510

Query: 112 ----------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
                      EA+ LF +M ++G+  + V ++ +MD L K G M  A ++ + +++  +
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+A VYN  ++  C  G+ + AK     M + G + +  +Y+ +I+  C+      AL 
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALK 630

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL- 280
           L +EM    IKP ++TY TL +GL E   VE+A  L +EM   G       YR  +    
Sbjct: 631 LLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACS 690

Query: 281 -CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIA 338
             ++ Y++  LE+   +       DI  Y+ L+  LC  G  + A  +    L RG+   
Sbjct: 691 GSRSPYVI--LEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGI-AP 747

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           D +T+N +I   C    +D A   +  M  +G++P+   FNTL+ G
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF  +   G   + + Y+TL++GL +TG+   AL + +E++  N        PDAV
Sbjct: 522 EAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN------LSPDAV 575

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC+ G   +AK  L +M++  + PD  TYN++I   C   ++++A +L  EM
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++PN++T++ ++  L + G +E+A  LL  M   G  P    Y  ++     +   
Sbjct: 636 KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSP 695

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E+   M   G   ++  Y+ L++  C +     A  +  EML +GI P  +T+N L
Sbjct: 696 YVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNAL 755

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G  +   ++ AF  + +M   G++ +   + T + GL   G I EA  +   ++ +  
Sbjct: 756 ILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGL 815

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +  +Y  L+ G  K      A  L+  +     I    TYN +I      G M++A +
Sbjct: 816 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKE 875

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF +M+ +GV      ++ L+ G  +    ++V  LL  M E
Sbjct: 876 LFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 194/402 (48%), Gaps = 4/402 (0%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  + +++   G   + +T ST + GL RTG    A  L E ++ G G  G+      V 
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL----GVVG 191

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +IDG CK   +  A  ++ +M  + ++ DVV YN+++ GF Y+ D++ A  +   M 
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+P+VVT + ++ E CK  ++EEA  L E M++ GV P+    + L+DG C  GR +
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M+ +G   N  +Y   I+   K + +  +L L  EM+S+G+   +V Y T+ 
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  ++E A  +        +  +   Y   +D  C+ G I  A ++   +      
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ ++S +++GL K G +  A      +    +  +VVTY  +I         + A D+
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + DM  +GV  +    ++L+ G  +N    +   L   M ER
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGER 533



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 197/434 (45%), Gaps = 33/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +AA    K+K  G  PNV+TY TLI+G  +      AL+++ +M+               
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 47  -----NGN-----------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                NGN           GE G++   D V Y T++DGL K G +  A ++  ++ ++N
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLL--DHVNYATLMDGLFKTGNMPAALKVGQELMERN 569

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           ++PD V YN  I   C     +EAK    EM + G++P+  T++ ++   C+ G   +A 
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +LL  M    ++PN   Y TL+ G    G V +AK L   M S G      +Y  ++   
Sbjct: 630 KLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQAC 689

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             ++     L ++  M+  G+   +  YNTL   L       +A  + DEM   G+A DT
Sbjct: 690 SGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             +   I G CK+ ++  A   +  +       +I +++ L+ GL  +GR+  A  +   
Sbjct: 750 ITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICE 809

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L  + +TY+I++          +A  L+ +M +KG  P    +N+L+    +   
Sbjct: 810 MKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGM 869

Query: 391 TSKVVELLHRMDER 404
            ++  EL   M  R
Sbjct: 870 MNQAKELFSEMKRR 883



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 39/384 (10%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMK--DKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           D +   +II   C    +  A  LL         +  D V+YN  + G         A  
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPP 138

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ------IGVRP-NAFV-- 167
           +  EM  +GV  + VT S  +  L + G + EA+ L E++++      +GV   NA +  
Sbjct: 139 VLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDG 198

Query: 168 ----------------------------YNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
                                       YNTL+ GF  +G  + A E+   M++ G + +
Sbjct: 199 YCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPS 258

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V +++ LI  YCK K IE A +LY  M+  G+ P VVT + L  GL    +   A+ LF 
Sbjct: 259 VVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFR 318

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EM + GVA +   Y TFID L K   + E+L L   +      +D+  Y+ ++D L K G
Sbjct: 319 EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEG 378

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +++ A ++        +  + VTY +++ A C  G +D A  + L ME K V+P+ V F+
Sbjct: 379 KIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFS 438

Query: 380 TLMLGCIRNNETSKVVELLHRMDE 403
           +++ G ++    +K    + +M +
Sbjct: 439 SILNGLVKRGCIAKAAGYMRKMKD 462



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 142/324 (43%), Gaps = 29/324 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           +A  L  ++K    +PN+ITY+TL+ GL   G    A  L  EM +              
Sbjct: 627 KALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686

Query: 49  ---NGE-------------FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              +G               G     D  +Y T++  LC  G   KA  +L +M  + I 
Sbjct: 687 QACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIA 746

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +T+N++I G C ++  + A   + +M+ QG+ PN+ TF+ ++  L   G++ EA  +
Sbjct: 747 PDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 806

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M ++G+ PN   Y+ L+ G+        A  L+  M S G      +Y+ LI+ + K
Sbjct: 807 ICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAK 866

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  L+SEM  +G+  T  TY+ L  G  ++        L  +M+  G       
Sbjct: 867 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926

Query: 273 YRTFIDGLCKNGYIVEALELFRTL 296
             +      K G   EA  L +TL
Sbjct: 927 ISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++K  G EPN +TY  L+ G  +  + + AL L+ EM++     G +  P A 
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK----GFI--PKAS 855

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I    K G +++AKEL  +MK + +     TY+ ++ G+    +  E + L  +M
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDM 915

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            + G +P+  T S +     K G   EA +LL+ + ++
Sbjct: 916 KELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++ + G  P   TY++LI+   + G    A  LF EM       GV+    +
Sbjct: 836 VEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEM----KRRGVLHT--S 889

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  +++G  K     + + LL  MK+    P   T +S+ R F     + EA+RL 
Sbjct: 890 STYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 211/392 (53%), Gaps = 7/392 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +++  GC PNV+TY+TLI+  C+ G    A  L + M +         +P+ + Y  I
Sbjct: 33  FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG------MQPNLISYNVI 86

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I+GLC+EG + +A E+L +M  K   PD VTYN+++ G+C   + ++A  +  EM+  GV
Sbjct: 87  INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 146

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+VVT++ +++ +CK   +  A +  + M   G+RPN   Y TL+DGF   G +N A  
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 206

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +   M   G   +V +Y+  I+G+C  + +E AL +  EM+ KG+ P VV+Y+T+  G  
Sbjct: 207 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 266

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              +++RAF++  EM   GV+ D   Y + I GLC+   + EA +L + +  +    D  
Sbjct: 267 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 326

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI+  C  G L  A  L   +     + D VTY+++I+ L    +  +A  L   +
Sbjct: 327 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 386

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
             +   P  V ++TL+  C  N E   VV L+
Sbjct: 387 IYEESVPSDVTYDTLIENC-SNIEFKSVVALI 417



 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 194/385 (50%), Gaps = 6/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV TY+ LI G C  G     L  F EM   NG     C P+ V Y T+ID  CK G +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNG-----CLPNVVTYNTLIDAYCKMGRI 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  LL  M  K + P++++YN +I G C      EA  +  EM  +G  P+ VT++ +
Sbjct: 62  DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  CK G   +A  +   M++ GV P+   Y  L++  C    +NRA E F  M   G 
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + N  +Y+ LI+G+ +   +  A  + +EM   G  P+VVTYN    G   + ++E A  
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM   G+A D  +Y T I G C+ G +  A ++ + +       D  +YS LI GLC
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +  RL  A +L   +    L  D  TY  +I+A C +G ++KA  L  +M  KG  PD V
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            ++ L+ G  +   T +   LL ++
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKL 386



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 199/415 (47%), Gaps = 21/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + + G +PN+I+Y+ +INGLCR G    A  + EEM    G  G    PD V
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++G CKEG   +A  +  +M    ++P VVTY ++I   C A + N A   F +M
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  T++ ++D   + G + EA ++L  M + G  P+   YN  + G C+  R+
Sbjct: 177 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 236

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G   +V SYS +I+G+C+  E++ A  +  EM+ KG+ P  VTY++L
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E+ ++  A  L  EM   G+  D + Y T I+  C  G + +AL L   +     
Sbjct: 297 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 356

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH------------- 348
             D  +YS LI+GL K  R + A  L   L     +   VTY+ +I              
Sbjct: 357 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 416

Query: 349 --ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               C  G M +A  +F  M  +   P    +N ++ G  R     K   L   M
Sbjct: 417 IKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 166/316 (52%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M    ++P+V TYN +IRGFC   +  +    F EM   G  PNVVT++ ++D  CK G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++EA  LL+ M   G++PN   YN +++G C  G +  A E+   M   G   +  +Y+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+NGYCK      AL +++EM+  G+ P+VVTY  L   + +   + RA + FD+M+  G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y T IDG  + G + EA  +   +        + +Y+  I G C   R++ A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            +   +    L  DVV+Y+ +I   C  G++D+A  +  +M  KGV+PD V +++L+ G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 386 IRNNETSKVVELLHRM 401
                 ++  +L   M
Sbjct: 301 CEMRRLTEACDLSQEM 316



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 150/284 (52%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V PNV T+++++   C  G++++       M + G  PN   YNTL+D +C  GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L  SM S G + N+ SY+++ING C+   ++ A  +  EM  KG  P  VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +     +A  +  EM R+GV+     Y   I+ +CK   +  A+E F  +RI  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              + R+Y+ LIDG  + G L  A+ + + +        VVTYN  IH  C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  +M  KG+APD V+++T++ G  R  E  +  ++   M E+
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 139/261 (53%), Gaps = 21/261 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G  P+V++YST+I+G CR G    A  + +EM+    E GV   PDAV
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV----EKGV--SPDAV 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GLC+   + +A +L  +M D  + PD  TY ++I  +C   D N+A  L  EM
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
           + +G  P+ VT+SV+++ L K  +  EA +LL  +I     P+   Y+TL++        
Sbjct: 352 IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK 411

Query: 174 -------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G ++ A  +F SM     K     Y+++I+G+C+   +  A +LY EM
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471

Query: 227 LSKGIKPTVVTYNTLFIGLFE 247
           +  G  P  VT  TL   LF+
Sbjct: 472 IHSGFVPHTVTVITLIKALFK 492



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 155/321 (48%), Gaps = 25/321 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G  P+V+TY+  I+G C       AL + +EM+    E G+   PD V
Sbjct: 203 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV----EKGLA--PDVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TII G C++G +D+A ++  +M +K ++PD VTY+S+I+G C      EA  L  EM
Sbjct: 257 SYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+  T++ +++  C  G + +A  L + MI  G  P+A  Y+ L++G     R 
Sbjct: 317 LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQART 376

Query: 182 NRAKELFVSM---ESM-----------GCKHNVF-SYSILINGYCKNKEIEGALSLYSEM 226
             AK L   +   ES+            C +  F S   LI G+C    +  A  ++  M
Sbjct: 377 REAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 436

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + +  KP    YN +  G      + +AF L+ EM   G    T    T I  L K G  
Sbjct: 437 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN 496

Query: 287 VEALEL----FRTLRILKCEL 303
            E  E+     R+ R+ + EL
Sbjct: 497 EEMSEVIGDTLRSCRLNEAEL 517


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 208/371 (56%), Gaps = 9/371 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN+ T++  INGLC+ G     LN  E++I     +G    P+ V Y T+IDG CK+G 
Sbjct: 197 QPNLTTFNIFINGLCKAGK----LNKAEDVIEDIKAWGF--SPNIVTYNTLIDGHCKKGS 250

Query: 76  VDK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
             K   A  +L +M    I P+ +T+N++I GFC   +   AK  F EM  QG++PN+VT
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +++ L  NGK++EA  L + M+ +G++PN   +N L++GFC    +  A++LF  + 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                 N  +++ +I+ +CK   +E   +L++ ML +GI P V TYN L  GL     V 
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A KL +EM+ + + AD   Y   I G CK+G   +A +L   +  +  + +  +Y+ L+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG C  G LK A ++   + +    A+VVTYN++I   C  GK++ A+ L  +M  KG+ 
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550

Query: 373 PDCVAFNTLML 383
           P+   ++ + L
Sbjct: 551 PNRTTYDVVRL 561



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 197/376 (52%), Gaps = 25/376 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT---IVALNLFEEMINGNGEFGVVCKP 58
           +A  +   +KA+G  PN++TY+TLI+G C+ G       A  + +EM+        +C P
Sbjct: 218 KAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK-----IC-P 271

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           + + + T+IDG CK+  V  AK    +M+ + + P++VTYNS+I G       +EA  L+
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G++PN+VTF+ +++  CK   ++EA +L + + +  + PNA  +NT++D FC  
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +     L  SM   G   NV +Y+ LI G C+N+ +  A  L +EM +  +K  VVTY
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  G  +  +  +A KL  EM   GV  +   Y T +DG C  G +  AL++   +  
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +Y+ LI G CK+G+L+ A  L + +    L  +  TY++             
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV------------- 558

Query: 359 AHDLFLDMEAKGVAPD 374
              + L+M  KG  PD
Sbjct: 559 ---VRLEMLEKGFIPD 571



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 177/353 (50%), Gaps = 39/353 (11%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A E+  +++D      + + N ++      N++ E + ++ EM+ + +QPN+ TF++
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR------------ 183
            ++ LCK GK+ +A  ++E +   G  PN   YNTL+DG C  G   +            
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265

Query: 184 --------------------------AKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                                     AK  F  M+  G K N+ +Y+ LING   N +++
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L+ +M+  G+KP +VT+N L  G  +   ++ A KLFD++    +  +   + T I
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMI 385

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D  CK G + E   L  ++       ++ +Y+CLI GLC++  ++ A +L + +    L 
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK 445

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           ADVVTYNI+I   C DG+  KA  L  +M   GV P+ V +NTLM G C+  N
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 154/282 (54%), Gaps = 41/282 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A   F +++  G +PN++TY++LINGL   G    A+ L+++M+      G+  KP+ 
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV------GLGLKPNI 343

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+G CK+  + +A++L   + ++++ P+ +T+N++I  FC A    E   L   
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 121 MMDQGVQPN-----------------------------------VVTFSVIMDELCKNGK 145
           M+D+G+ PN                                   VVT+++++   CK+G+
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             +A +LL  M+ +GV+PN   YNTLMDG+C+ G +  A ++   ME  G + NV +Y++
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           LI G+CK  ++E A  L +EML KG+ P   TY+ + + + E
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLE 565



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 141/278 (50%), Gaps = 14/278 (5%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRP--NAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +D+L KN K   +S    L++  G RP  NA + + L+  +     ++ A E+F  ++  
Sbjct: 101 LDKLVKNEKHTVSSVFHSLLLG-GDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDY 159

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G K ++ S + L++   K  E      +Y EM+ + I+P + T+N    GL +  ++ +A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-------CELDIRS 307
             + ++++  G + +   Y T IDG CK G    A +++R   ILK       C  +I +
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKG---SAGKMYRADAILKEMLANKICPNEI-T 275

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           ++ LIDG CK   +  A   F  + R  L  ++VTYN +I+ L  +GK+D+A  L+  M 
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             G+ P+ V FN L+ G  +     +  +L   + E++
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 208/372 (55%), Gaps = 7/372 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   K+   G EP+++T+ +L+NG C       A++L ++++      G+  +P+ VI
Sbjct: 127 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV------GLGYEPNVVI 180

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIID LC+   VD A ++L  M+   I PDV+TYNS+I    ++     + R+  +MM
Sbjct: 181 YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMM 240

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+TFS ++D   K G++ EA +  + MIQ  V PN   YN+L++G C+ G ++
Sbjct: 241 RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLD 300

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK++   M S G   N  +Y+ L+NGYCK+K ++ A+ +   M   G+     TYNTL+
Sbjct: 301 EAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  Q   A K+   M   GV  D + +   +DGLC++G I +AL     L+  +  
Sbjct: 361 QGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           + I +Y+ +I G+CK+ +++ AW LF SL    +  DV+TY  M+  L       +AH+L
Sbjct: 421 VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480

Query: 363 FLDMEA-KGVAP 373
           +  M+   G+ P
Sbjct: 481 YRKMKKDDGLMP 492



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 211/401 (52%), Gaps = 10/401 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF  ++  G   ++ ++STLI+  CR     +AL+   +M+    E      P  V + 
Sbjct: 94  SLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFE------PSIVTFG 147

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G C    + +A  L+ Q+      P+VV YN++I   C     + A  +   M   
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKM 207

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+V+T++ ++  L  +GK   ++++L  M+++G+ P+   ++ ++D F   G++  A
Sbjct: 208 GIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEA 267

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K+ +  M       N+ +Y+ LING C +  ++ A  + + M+SKG  P  VTYNTL  G
Sbjct: 268 KKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL- 303
             +  +V+ A K+   M   GV  DT+ Y T   G C+ G    A ++    R++ C + 
Sbjct: 328 YCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLA--RMVSCGVL 385

Query: 304 -DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +++ L+DGLC+ G+++ A      L +   +  ++TYNI+I  +C   K++ A  L
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  +  KGV+PD + + T+M+G  R     +  EL  +M +
Sbjct: 446 FCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 170/338 (50%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V ++ ++  + K    +    L   ++   I+ D+ +++++I  FC  +  + A   
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++VTF  +++  C   +++EA  L++ ++ +G  PN  +YNT++D  C 
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +V+ A ++   ME MG + +V +Y+ LI     + +   +  + S+M+  GI P V+T
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           ++ +     +  Q+  A K +DEM +  V  +   Y + I+GLC +G + EA ++   + 
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +  +Y+ L++G CKS R+  A ++   +    +  D  TYN +    C  G+ +
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            A  +   M + GV PD   FN L+ G   + +  K +
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 158/325 (48%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A  L   M +    P +V ++ ++              LF  +   G+  ++ +FS +
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  C+  ++  A   L  M+++G  P+   + +L++GFC   R+  A  L   +  +G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + NV  Y+ +I+  C+N++++ AL + + M   GI+P V+TYN+L   LF   +   + +
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  +M R G+  D   +   ID   K G ++EA + +  +     + +I +Y+ LI+GLC
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             G L  A ++ + +       + VTYN +++  C   ++D A  +   M   GV  D  
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +NTL  G  +  + +   ++L RM
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARM 379



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 154/301 (51%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y   +R   ++   N+A  LF +M +    P++V FS ++  + K  K E    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+  + + ++TL+D FC   R++ A      M  +G + ++ ++  L+NG+C    I+
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+SL  +++  G +P VV YNT+   L E  QV+ A  + + M++ G+  D   Y + I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             L  +G    +  +   +  +    D+ ++S +ID   K G+L  A + +  + +  + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++VTYN +I+ LC  G +D+A  +   M +KG  P+ V +NTL+ G  ++      +++
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI 340

Query: 398 L 398
           L
Sbjct: 341 L 341



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 6/226 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   + ++     +PN++TY++LINGLC  G    A  +   M++  G F     P+A
Sbjct: 265 LEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVS-KGFF-----PNA 318

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+++G CK   VD A ++L  M    ++ D  TYN++ +G+C A   N A+++   
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++ TF++++D LC++GK+E+A   LE + +         YN ++ G C   +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V  A  LF S+   G   +V +Y+ ++ G  + +    A  LY +M
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKM 484



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFE------------IHQVE--RAFKLFDEMQRHGVA 267
           L+  +L KG   T ++ N    G F             +H ++   A  LF +M      
Sbjct: 11  LHRHLLEKGNPVTALSLNVCNFGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPL 70

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                +   +  + K       + LFR + IL    D+ S+S LID  C+  RL +A   
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              + +      +VT+  +++  C   ++ +A  L   +   G  P+ V +NT++     
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 388 NNETSKVVELLHRMDE 403
           N +    +++L+ M++
Sbjct: 191 NRQVDTALDVLNHMEK 206


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 210/405 (51%), Gaps = 21/405 (5%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP ++T + L+ G C  G    A  L   M +        C PD V Y T++DGLCK G 
Sbjct: 209 EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE------CAPDEVSYCTVLDGLCKAGR 262

Query: 76  VDKA------KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           V++A      +EL       +  P +  YN VI G C  +  +EA ++F +M ++ V P+
Sbjct: 263 VEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPD 322

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             ++ +++D L K GK+ +A  L + ++  GV P+   Y +L+ G C+    + A+ELF 
Sbjct: 323 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 382

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  P VVTYNT+  GL +  
Sbjct: 383 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 442

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL------ELFRTLRILKCE- 302
           +VE A  LF+EM+R G   +  ++ T I GLC+   I +A       E FR L+ +  + 
Sbjct: 443 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDG 502

Query: 303 --LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +YS LI GLC   R+  A  L   + +      VVT N +IH LC  G++ +A 
Sbjct: 503 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++   M + G +PD V +NTL+ G  R  +T +  ELL  M  R 
Sbjct: 563 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 607



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 205/426 (48%), Gaps = 50/426 (11%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+ +I GLC+      A+ +FE+M   N        PD+  Y  +IDGL K G ++ A+ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARN 344

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L  ++    + P  V Y S+I G C AN  ++A+ LF +M  +G  P+ VT++V++D  C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN-- 199
           K G +EEA  L++ MI+ G  P+   YNT+MDG C + RV  A  LF  ME +GC  N  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 200 ------------------------------------------VFSYSILINGYCKNKEIE 217
                                                     V +YS LI+G C    ++
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ +  KPTVVT NTL  GL +  +++ A ++ D M   G + D   Y T +
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C+ G    A EL   +       ++ +Y+ L+ GLCK+ RL  A  +F  +      
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            ++ TY  +I   C+ G++D    LF +M   G++PD V + TL     ++  +++ +E+
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704

Query: 398 LHRMDE 403
           L    E
Sbjct: 705 LREGRE 710



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 202/389 (51%), Gaps = 24/389 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G  P+V+TY+T+++GLC++     AL LF EM        + C P+  
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTPNRR 464

Query: 62  IYTTIIDGLCKE---------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
            + TII GLC++         G +D+A  LL +M D    PDVVTY+++I G C     +
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A+ L  +M+ +  +P VVT + ++  LCK G+++EA ++L+ M+  G  P+   YNTL+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C  G+  RA+EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P + TY  L +G     QV+   KLF EM   G++ D   Y T    LCK+G    ALE+
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704

Query: 293 FRTLR-ILKCE-LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            R  R  L+ E      Y   +DGL ++G++++A      + RG  +        ++  L
Sbjct: 705 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 764

Query: 351 CADGKMDKAH-------DLFLDMEAKGVA 372
           C  G+  +A        DL    +A+G A
Sbjct: 765 CKSGQGGEARAVLEEIMDLAYGGKARGKA 793



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 184/395 (46%), Gaps = 20/395 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P  + ++++I G C  G T  A+ +F  M   +  +     PD  +Y  +ID L K    
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPY-----PD--VYNVLIDSLSKRQET 60

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +  K+++  M D+   PD  T+ +++ G C A   +EA+ +  EM  + + P   T S +
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
             ELC  G ME A QLLE+M       N+  YN ++   C   RV+ A EL  +M     
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                S   ++ G   +  I+ AL +Y E      +P +VT N L  G     QV++A +
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI------LKCELDIRSYSC 310
           L   M     A D  +Y T +DGLCK G + EA+ LF    +            +R Y+ 
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +I GLC++ R+  A ++F  +    +  D  +Y I+I  L   GK++ A +LF  +   G
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           V P  VA+ +L+ G    N      EL   M+ R 
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 158/328 (48%), Gaps = 18/328 (5%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M  + I P  + + SVI+G+C    + EA ++F  +M++   P    ++V++D L K  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            E   +++++M+  G  P++F + T++ G C  G+++ A+ +   M S        + S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTV--VTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           L +  C    +E A  L        I P      YN + + L +  +V+ A +L   M  
Sbjct: 120 LAHELCLRGSMERAFQLLE------IMPVANSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
             +     +  + + GL  +G I EAL+++R  R   C   + + + L++G C  G++  
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDK 230

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV------A 377
           A EL  ++P      D V+Y  ++  LC  G++++A  LF D E    +           
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
           +N ++LG  +N+   + V++  +M+ERN
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERN 318


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 211/399 (52%), Gaps = 12/399 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE---EMINGNGEFGVVCKPDAVI 62
           L  ++    C PN++T++TLI+ LCR G       LFE   E++    E G  C PD  +
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNG-------LFERVHEVLAQMAEHG--CTPDIRM 299

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TIIDG+CKEG +  A E+L +M    + P+VV YN++++G C A    E + L  EM 
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+    + VTF++++D  C+NG ++   +LLE M+  G  P+   Y T+++GFC  G ++
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLID 419

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L  SM + GCK N  SY+I++ G C  +    A  L S+M+ +G     +T+NTL 
Sbjct: 420 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +   VE+A +L  +M  +G + D  +Y T IDGL K G   EALEL   +      
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   YS +   L + GR+    ++F ++    + +D V YN +I +LC  G+ ++A + 
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M + G  P+   +  L+ G        +  E+L  +
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   L +FGCEP+V++Y+ ++ GLC          L EEM+       + C P+ V
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR------MACPPNIV 263

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E+L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + EE  +LL  M       +   +N L+D FC  G V
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M   GC  +V +Y+ +ING+CK   I+ A+ L   M + G KP  ++Y  +
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A  L  +M + G   +   + T I+ LCK G + +A+EL + + +  C
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+   A EL + +    +  + + Y+ +  AL  +G+++K   
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +++   +  D V +N ++    +  ET + +E L  M
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++   GC P    Y  ++   CR G    A+ + E++ +  G     C  D  
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL-HARG-----CALDVG 193

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C +G VDKA  LL  +      PDVV+YN+V++G C A      + L  EM
Sbjct: 194 NCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M + G  P+  +Y T++DG C  G +
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHL 313

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K      VT+N L
Sbjct: 314 KVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A +
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 284 VLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA----HEILNRMPSYGL--KPNVVCYNT 337

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC     ++ +ELL +M DK+   D VT+N ++  FC     +    L  +M+  G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C   R   A+
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + + A +L + M   G++ +T  Y +    L + G I + +++F  ++      D 
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDA 577

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK G  + A E    +     + +  TY I+I  L ++G + +A ++  +
Sbjct: 578 VLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637

Query: 366 MEAKG 370
           + +KG
Sbjct: 638 LCSKG 642



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC  N IT++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 506

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  D+A ELL  M +K ++P+ + Y+S+          N+  ++F 
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK G+ E A + L  M+  G  PN   Y  L+ G    G
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626

Query: 180 RVNRAKELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 627 FVKEAQEMLTELCSKGALRKHLMKHFGIV 655



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++   C+ G++E A +L      + V PNA+ Y  ++   C  GR+  A  +   M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC      Y +++   C+      A+ +  ++ ++G    V   N +   + +   V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           +A  L  ++   G   D  +Y   + GLC         EL   +  + C  +I +++ LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             LC++G  +   E+   +       D+  Y  +I  +C +G +  AH++   M + G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           P+ V +NTL+ G        +  ELL  M +++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 213/434 (49%), Gaps = 30/434 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVV- 55
           EA  LF KLK  GC PNV+ Y+ +I+GL + G     L  FE+M     +     + VV 
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PD + YTT+IDG  K   +D+A++LL  M  K   
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTY S++ GFC  +  NEAK +  +M ++G +P +  F+ ++      G+ EEA Q+
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  P+  +Y +L+D    TGRV  A+ +F SM   GC  +  +Y  +I  + K
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  +   M   G+ P    YN+L  G  ++ +V++AF ++D M   G+  +   
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680

Query: 273 YRTFIDGLCKNGYIVEALELFRT-LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +   + GL K+G    A  LF+  L   +    + SY+ LIDGL K+GR+  A+  F  +
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +I +  TY  +I++L   G++ +A  L  DM   GV PD  A++ L+ G I ++  
Sbjct: 741 IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMV 800

Query: 392 SKVVELLHRMDERN 405
               ++   M +R 
Sbjct: 801 DTAWDVFQEMMKRG 814



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 216/428 (50%), Gaps = 34/428 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA---LN-----------LFEEMIN 47
           EA   F  +   GCEP+VI ++TLI+G C+ G   V    LN           L+  +I+
Sbjct: 73  EAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIH 132

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           G  + G +              C PDA  Y  +ID LCK G VD+A EL  +M+      
Sbjct: 133 GYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLG 192

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D VT+ ++I         +EA  L+ EM+++G +P +     ++  LCK GK++EA+++ 
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + ++   V  +   YN+LMDG+C  GRV+   +L + M       ++ +Y+IL+ G+ + 
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ AL L+  + S G KP   TY T+  GL++  ++E A   FDE      A D  +Y
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISY 366

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            T I GL  +  I EA ELF  L+   C  ++ +Y+ +IDGL K+GR++   + F  +  
Sbjct: 367 TTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSG 426

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
              +    TY ++I  LC    +  A  +F  M  KG  PD + + TL+ G  + ++  +
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486

Query: 394 VVELLHRM 401
             +LL  M
Sbjct: 487 ARKLLDVM 494



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 203/428 (47%), Gaps = 24/428 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF  L ++GC+PN  TY+T+I GL        A   F+E ++      V+      
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS 376

Query: 56  -----------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
                            C P+ V YT +IDGL K G ++   +    M   +  P   TY
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTY 436

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             VI G C A    +A ++F +M+ +G  P+ +T++ ++D   K  KM+EA +LL++M+ 
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P A  Y +++ GFC    +N AKE+   M   GC+  +F ++ L++ Y      E 
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  + +EM ++G  P V+ Y +L   LF   +V  A  +FD M   G A D   Y T I 
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
              K G +  A E+   +       D  +Y+ L+DG  K  R+  A+ ++  +    +  
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           + VT+N+++H L  DGK D+A  LF +M E   V P  V++  L+ G  +    S+    
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736

Query: 398 LHRMDERN 405
              M +R 
Sbjct: 737 FQEMIDRG 744



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 198/403 (49%), Gaps = 49/403 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   GC P+ ITY+TLI+G  +      A  L + M+    E      P AV
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAV 504

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP---------------------------- 93
            Y +I+ G CK   +++AKE++ QM+++   P                            
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564

Query: 94  -------DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                  DV+ Y S+I          EA+ +F  M+++G  P+ +T+  I+    K G +
Sbjct: 565 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 624

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A ++LELM + GV P+ F YN+LMDG+    RV++A  ++  M + G K N  ++++L
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++G  K+ + + A SL+ EML K  + PT+V+Y  L  GL +  +V  AF  F EM   G
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y + I  L K G I EA +L   +  L    D+++YS LI GL  S  +  AW
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           ++F  + +     + VTY ++     A G+        LD+EA
Sbjct: 805 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA-------LDLEA 840



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 205/417 (49%), Gaps = 40/417 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   G  P+V+  + ++NGLC+      A+ LF EM +      + C+P  V
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS------MGCEPTIV 56

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GL     +D+A +    M D    PDV+ + ++I GFC A        L  + 
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P+V  ++ ++   CK G ++   ++LE M+  G  P+A  Y  L+D  C  GRV
Sbjct: 117 LKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ELF  M   GC  +  ++  LI     + +++ A  LY EM+ +G +P +   ++L
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V+ A +++  +    VA    AY + +DG CK G + + L+L   L++++C
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL--LQMVEC 293

Query: 302 E--LDIRSYSCLIDGLCKSGRLKIAWELFHSLP---------------RGVLIA------ 338
           +   DI++Y+ L+ G  ++ RL  A ELF  L                +G+  A      
Sbjct: 294 DNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA 353

Query: 339 --------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
                   DV++Y  +I  L    ++D+A +LF  ++  G +P+ VA+  ++ G ++
Sbjct: 354 KAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 1/323 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +++A + L +M    + PDVV  N V+ G C A   ++A  LF+EM   G +P +V+++ 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  L    KM+EA +    MI  G  P+   + TL+ GFC  G+  +   + ++     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +VF Y+ +I+GYCK  +++    +  EML+ G  P    Y  L   L ++ +V+ A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF+ M++ G   D   + T I+ L  +G + EA EL+R +     E  +     LI  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK+G++  A E++ ++    +    V YN ++   C  G++D    L L M      PD 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 376 VAFNTLMLGCIRNNETSKVVELL 398
             +N L+ G  R N     +EL 
Sbjct: 300 QTYNILVAGFSRANRLDDALELF 322



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 153/292 (52%), Gaps = 1/292 (0%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            EA     EM   G+ P+VV  +++++ LCK  K+++A +L   M  +G  P    YNT+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G     +++ A + F SM   GC+ +V +++ LI+G+CK  + +    L ++ L K  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRF 120

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P V  Y ++  G  +   ++  FK+ +EM   G   D  AY   ID LCK G + EA E
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R   C  D  ++  LI+ L   G+L  A EL+  +        +   + +I ALC
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             GK+D+A++++  + AK VA   VA+N+LM G  +       ++LL +M E
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 15/222 (6%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M + G   +V + +I++NG CK ++I+ A+ L+ EM S G +PT+V+YNT+  GL  I +
Sbjct: 11  MHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK 70

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY-------IVEALELFRTLRILKCEL 303
           ++ A+K F+ M  +G   D  A+ T I G CK G        + +AL+ FR         
Sbjct: 71  MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRP-------- 122

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+  Y+ +I G CK+G L   +++   +     I D   Y ++I  LC  G++D+A++LF
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M   G   D V F TL+     + +  +  EL   M ER 
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 224/403 (55%), Gaps = 13/403 (3%)

Query: 1   MEAAALFTKLKAFGCEP--NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           M  A LF  ++   CEP  ++ TY++L+ G CR           +++    G F V+ + 
Sbjct: 205 MAVARLFF-VRILRCEPGPDLFTYTSLVLGYCRN----------DDVERACGVFCVMPRR 253

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +AV YT +I GLC+ G + +A E   +M++    P V TY  ++   C +    EA  LF
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM ++G +PNV T++V++D LCK G+M+EA ++L  M++ GV P+   +N L+  +C  
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +  A  +   MES     NV +Y+ LI G+C+ K ++ A++L ++M+   + P VVTY
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  GL E+  V+ A +LF  M R G + D W +  F+  LC+ G + EA ++  +L+ 
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +  +Y+ LIDG CK+G+++ A  LF  +     + + +T+N+MI  L  +GK+  
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  L  DM    V P    +N L+   ++  +  +  E+L+R+
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 200/382 (52%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA +LF +++  GCEPNV TY+ LI+ LC+ G    AL +  EM+    E GV   P  
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV----EKGVA--PSV 360

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I   CK G ++ A  +L  M+ K + P+V TYN +I GFC     + A  L  +
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P+VVT++ ++  LC+ G ++ AS+L  LMI+ G  P+ + +N  M   C  GR
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++  S++    K N  +Y+ LI+GYCK  +IE A SL+  ML++   P  +T+N 
Sbjct: 481 VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNV 540

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +V+ A  L ++M +  V      Y   ++ + K      A E+   L    
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ +Y+  I   C  GRL+ A E+   +    ++ D   YN++I+A    G +D A 
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAF 660

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            +   M   G  P  + ++ LM
Sbjct: 661 GVLRRMFGTGCEPSYLTYSILM 682



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 9/347 (2%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNIN---PDVVTYNSVIRGFCYANDSNEAKRLFI 119
           Y  ++  L +   VD+   L  +M   N N   P+++T N+++  +C   +   A+  F+
Sbjct: 154 YNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFV 213

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            ++     P++ T++ ++   C+N  +E A  +  +M     R NA  Y  L+ G C  G
Sbjct: 214 RILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYTNLIHGLCEAG 269

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTY 238
           +++ A E +  M   GC   V +Y++L+   C++ +E+E ALSL+ EM  +G +P V TY
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEMRERGCEPNVYTY 328

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L   L +  +++ A K+ +EM   GVA     +   I   CK G + +A+ +   +  
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   ++R+Y+ LI G C+   +  A  L + +    L  DVVTYN +IH LC  G +D 
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A  LF  M   G +PD   FN  M+   R     +  ++L  + E++
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 35/416 (8%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV TY+ LI G CR      A+ L  +M+           PD V Y T+I GLC+ G V
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESK------LSPDVVTYNTLIHGLCEVGVV 446

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  L   M     +PD  T+N+ +   C      EA ++   + ++ V+ N   ++ +
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK GK+E A+ L + M+     PN+  +N ++DG    G+V  A  L   M     
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K  + +Y+IL+    K  + + A  + + ++S G +P VVTY           ++E A +
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  +++  GV  D++ Y   I+     G +  A  + R +    CE    +YS L+  L 
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 317 -----KSGRLKIA---------------WE---------LFHSLPRGVLIADVVTYNIMI 347
                K G   +                W          LF  +     + ++ TY+ +I
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + LC  G+++ A  L+  M   G++P  +  N+L+  C +     + V LL  M E
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 197/466 (42%), Gaps = 70/466 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A AL  K+      P+V+TY+TLI+GLC  G    A  LF  MI           PD  
Sbjct: 413 RAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF------SPDQW 466

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +   +  LC+ G V +A ++L  +K+K++  +   Y ++I G+C A     A  LF  M
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEA-------------------------------- 149
           + +   PN +TF+V++D L K GK+++A                                
Sbjct: 527 LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDF 586

Query: 150 ---SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
              +++L  +I  G +PN   Y   +  +C  GR+  A+E+ + +++ G   + F Y++L
Sbjct: 587 DRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLL 646

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL-FEIHQVERAFK--------- 256
           IN Y     ++ A  +   M   G +P+ +TY+ L   L  E H+ E +           
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 257 -------------------LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                              LF++M   G   +   Y   I+GLCK G +  A  L+  +R
Sbjct: 707 ISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                     ++ L+   CK G    A  L  S+     +A + +Y ++I  L      +
Sbjct: 767 EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKE 826

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           KA  +F  +   G   D VA+  L+ G  +     +  ELL+ M++
Sbjct: 827 KAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEK 872



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 184/410 (44%), Gaps = 35/410 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   LK    + N   Y+ LI+G C+ G    A +LF+ M+         C P+++
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE------CLPNSI 536

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +IDGL KEG V  A  L+  M   ++ P + TYN ++       D + A  +   +
Sbjct: 537 TFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QPNVVT++  +   C  G++EEA +++  +   GV  ++F+YN L++ +   G +
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656

Query: 182 NRAKELFVSMESMGCKHNVFSYSILI-----------------------NGYCKNKEIEG 218
           + A  +   M   GC+ +  +YSIL+                       N    N +I  
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716

Query: 219 ALS------LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +       L+ +M   G  P + TY+ L  GL ++ ++  AF L+  M+  G++     
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + + +   CK G   EA+ L  ++        + SY  LI GL +    + A  +F SL 
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           R     D V + ++I  L   G +D+  +L   ME  G       ++ LM
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 161/381 (42%), Gaps = 70/381 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            AA+LF ++ A  C PN IT++ +I+GL + G    A+ L E+M     +F V  KP   
Sbjct: 518 HAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM----AKFDV--KPTLH 571

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ + KE   D+A E+L ++      P+VVTY + I+ +C      EA+ + I++
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV  +   ++++++     G ++ A  +L  M   G  P+   Y+ LM    +    
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691

Query: 182 NRAKE-----------------------------LFVSMESMGCKHNVFSYSILINGYCK 212
                                             LF  M   GC  N+ +YS LING CK
Sbjct: 692 KEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLF------------------------------ 242
              +  A SLY  M   GI P+ + +N+L                               
Sbjct: 752 VGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLES 811

Query: 243 -----IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                 GLFE    E+A  +F  + R G   D  A++  IDGL K GY+ +  EL   + 
Sbjct: 812 YKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871

Query: 298 ILKCELDIRSYSCLIDGLCKS 318
              C L   +YS L+  L ++
Sbjct: 872 KNGCRLHPETYSMLMQELNRA 892



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 42/244 (17%)

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------ 230
           L  R+N A         +  K ++ SY+ L+    +   ++  +SLY EML+        
Sbjct: 128 LLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFP 187

Query: 231 --------------------------------IKPTVVTYNTLFIGLFEIHQVERAFKLF 258
                                             P + TY +L +G      VERA  +F
Sbjct: 188 NLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVF 247

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M R        +Y   I GLC+ G + EALE +  +R   C   +R+Y+ L+  LC+S
Sbjct: 248 CVMPRRNAV----SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCES 303

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR   A  LF  +       +V TY ++I  LC +G+MD+A  +  +M  KGVAP  V F
Sbjct: 304 GRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPF 363

Query: 379 NTLM 382
           N L+
Sbjct: 364 NALI 367


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 226/467 (48%), Gaps = 65/467 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +A  L++ +      PN ITYS LI+  CR+G   VA++ F+ MI               
Sbjct: 383 KAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLI 442

Query: 47  NGNGEFGVVC--------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  +FG +               +P A  +T++I G CK+  V KA +L  +M D  I 
Sbjct: 443 NGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+V T+ ++I G C  N   EA  LF E++++ ++P  VT++V+++  C++GK+++A +L
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFEL 562

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M Q G+ P+ + Y  L+ G C TGRV++AK+    +     K N   YS L++GYC+
Sbjct: 563 LEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQ 622

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  ALS   EM+ +GI   +V +  L  G  +    +  F L  +M   G+  D   
Sbjct: 623 EGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVI 682

Query: 273 YRTFID-----------------------------------GLCKNGYIVEALELFRTLR 297
           Y + ID                                   GLCK G +  A  LF+ ++
Sbjct: 683 YTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +  +Y C +D L K G +K A  L H++ +G L+A+ VT+NI+I   C  G+  
Sbjct: 743 AANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKG-LLANTVTHNIIIRGFCKLGRFH 801

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  +  +M   G+ PDCV ++TL+    R+      V+L   M  R
Sbjct: 802 EATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR 848



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L   G   +V+TY TL+ G CR       + L +EM+    E G    P   
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV----ELGF--SPTEA 331

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + ++DGL K+G +D A EL++++      P++  YN++I   C   D ++A+ L+  M
Sbjct: 332 AVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++PN +T+S+++D  C++G+++ A    + MIQ G+    + YN+L++G C  G +
Sbjct: 392 SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDL 451

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ LF+ M + G +    +++ LI+GYCK+ +++ A  LY++M+  GI P V T+  L
Sbjct: 452 SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTAL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL   +++  A +LFDE+    +      Y   I+G C++G I +A EL   +     
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LI GLC +GR+  A +    L +  +  + + Y+ ++H  C +G++ +A  
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              +M  +G+  D V    L+ G ++  +     +LL  M ++
Sbjct: 632 ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ 674



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 204/424 (48%), Gaps = 41/424 (9%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA---------------- 60
           P V T S L+NGL +    I    LF+E +N     GV  +PD                 
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNA----GV--RPDPYTCSAVVRSMCELKDF 241

Query: 61  -------------------VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSV 101
                              V Y  +I GLCK   V +A E+   +  K +  DVVTY ++
Sbjct: 242 LRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTL 301

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           + GFC         +L  EM++ G  P     S ++D L K GK+++A +L+  + + G 
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            PN FVYN L++  C  G +++A+ L+ +M  M  + N  +YSILI+ +C++  ++ A+S
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            +  M+  GI  TV  YN+L  G  +   +  A  LF EM   GV      + + I G C
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K+  + +A +L+  +       ++ +++ LI GLC + ++  A ELF  L    +    V
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TYN++I   C DGK+DKA +L  DM  KG+ PD   +  L+ G       SK  + +  +
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 402 DERN 405
            ++N
Sbjct: 602 HKQN 605



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 198/404 (49%), Gaps = 9/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ K+   G  PNV T++ LI+GLC T     A  LF+E++          KP  V
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK------IKPTEV 541

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C++G +DKA ELL  M  K + PD  TY  +I G C     ++AK    ++
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q V+ N + +S ++   C+ G++ EA      MIQ G+  +   +  L+DG       
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +L   M   G + +   Y+ +I+ Y K    + A   +  M+++   P VVTY  L
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++RA  LF  MQ   V  ++  Y  F+D L K G + EA+ L   +  LK 
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM--LKG 779

Query: 302 EL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            L +  +++ +I G CK GR   A ++   +    +  D VTY+ +I+  C  G +  + 
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L+  M  +G+ PD VA+N L+ GC  N E  K  EL   M  R
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 177/373 (47%), Gaps = 42/373 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF +L     +P  +TY+ LI G CR G    A  L E+M     + G+V  PD  
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM----HQKGLV--PDTY 576

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA------- 114
            Y  +I GLC  G V KAK+ +  +  +N+  + + Y++++ G+C      EA       
Sbjct: 577 TYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEM 636

Query: 115 ------------------------KRLFIE----MMDQGVQPNVVTFSVIMDELCKNGKM 146
                                   ++ F +    M DQG++P+ V ++ ++D   K G  
Sbjct: 637 IQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSF 696

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +  +LM+     PN   Y  LM+G C  G ++RA  LF  M++     N  +Y   
Sbjct: 697 KKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCF 756

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++   K   ++ A+ L+  ML KG+    VT+N +  G  ++ +   A K+  EM  +G+
Sbjct: 757 LDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGI 815

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y T I   C++G +  +++L+ T+     E D+ +Y+ LI G C +G L  A+E
Sbjct: 816 FPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFE 875

Query: 327 LFHSLPRGVLIAD 339
           L   + R  +I D
Sbjct: 876 LRDDMLRRGIIPD 888



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 155/312 (49%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N+ P+V T ++++ G            LF E ++ GV+P+  T S ++  +C+      A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            + +  M   G   +   YN L+ G C   RV+ A E+  S+   G   +V +Y  L+ G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +C+ ++ E  + L  EM+  G  PT    + L  GL +  +++ A++L  ++ R G   +
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            + Y   I+ LCK G + +A  L+  + ++    +  +YS LID  C+SGRL +A   F 
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  +   V  YN +I+  C  G +  A  LF++M  KGV P    F +L+ G  ++ 
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484

Query: 390 ETSKVVELLHRM 401
           +  K  +L ++M
Sbjct: 485 QVQKAFKLYNKM 496



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 37/301 (12%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC--------------------- 56
           N + YS L++G C+ G  + AL+   EMI       +VC                     
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL 668

Query: 57  --------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                   +PD VIYT++ID   KEG   KA E    M  +   P+VVTY +++ G C A
Sbjct: 669 KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
            + + A  LF  M    V PN +T+   +D L K G M+EA  L   M++ G+  N   +
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTH 787

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++ GFC  GR + A ++   M   G   +  +YS LI  YC++  +  ++ L+  ML+
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G++P +V YN L  G     ++++AF+L D+M R G+  D          L K G I E
Sbjct: 848 RGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN-------KYLQKKGTIFE 900

Query: 289 A 289
           A
Sbjct: 901 A 901



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 1/204 (0%)

Query: 196 CK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           CK  +   +++L+  Y  +  I  A+ +   M +  + P V T + L  GL ++ +    
Sbjct: 150 CKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITV 209

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           ++LFDE    GV  D +     +  +C+    + A E  R +     +L I +Y+ LI G
Sbjct: 210 WELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHG 269

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK  R+  A E+  SL    L ADVVTY  ++   C   + +    L  +M   G +P 
Sbjct: 270 LCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329

Query: 375 CVAFNTLMLGCIRNNETSKVVELL 398
             A + L+ G  +  +     EL+
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELV 353


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/400 (37%), Positives = 215/400 (53%), Gaps = 18/400 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K+   G +  V  YS+LI+G C+ G    A +LF+EMI  NG      KP+ VI
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI-ANG-----LKPNVVI 462

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT++I G CKEG +  A  L  +M  K I+P+  T+ ++I G C+AN   EA +LF EM+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V PN VT++V+++  CK G    A +LL+ M++ G+ P+ + Y  L+ G C TGRV+
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 183 RAKELFVSM--------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            A+E    +        E  GC  NV +Y+ LING CK   ++ A  L  EML+    P 
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TY      L     +E+A +L D +   G  A+T  Y   I G CK G I EA E+  
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCAD 353
            +       D  SYS +I   C+ G LK A +L+ S L RGV   D V YN +I+  C  
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV-NPDTVAYNFLIYGCCVT 760

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETS 392
           G++ KA +L  DM  +GV P+   +N+L+ G C+ ++ +S
Sbjct: 761 GELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSS 800



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 226/481 (46%), Gaps = 85/481 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L   G   +V TY TL+ GLC+    +      EEM+N   EFG V  P   
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCK----VEEFEAGEEMMNEMIEFGFV--PSEA 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + ++DGL K+G +  A +L+ ++K   + P +  YN++I   C     +EA+ LF  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN VT+S+++D  CK GK++ A   L  M ++G++   + Y++L+ G C  G++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK LF  M + G K NV  Y+ LI+GYCK  E+  A  LY EM  KGI P   T+  L
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 242 FIG-------------------------------LFEIHQVE----RAFKLFDEMQRHGV 266
             G                               L E H  E    RAF+L DEM   G+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLR--------ILKCELDIRSYSCLIDGLCK- 317
             DT+ YR  I GLC  G + EA E    L+        I  C  ++ +Y+ LI+GLCK 
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621

Query: 318 ----------------------------------SGRLKIAWELFHSLPRGVLIADVVTY 343
                                              G ++ A +L   L  G L A+ VTY
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTY 680

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           NI+I   C  G++ +A ++ ++M   G++PDC++++T++    R  +  + ++L   M  
Sbjct: 681 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 740

Query: 404 R 404
           R
Sbjct: 741 R 741



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 203/424 (47%), Gaps = 41/424 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P + T S ++NGL R     +AL+LF+E+++         +PD  +YT ++  LC+ 
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG------LRPDVYVYTAVVRSLCEL 228

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA------------------- 114
               +A+E++ +M+    +  V TYN  IRG C      EA                   
Sbjct: 229 KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTY 288

Query: 115 ----------------KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                           + +  EM++ G  P+    S ++D L K G +  A  L+  + +
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV P+ FVYN L++  C  G+++ A+ LF +M   G   N  +YSILI+ +CK  +++ 
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL    +M   GIK TV  Y++L  G  ++ ++  A  LFDEM  +G+  +   Y + I 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK G +  A  L+  +       +  +++ LI GLC + R+  A +LF  +    +I 
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           + VTYN++I   C +G   +A +L  +M  KG+ PD   +  L+ G       S+  E +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 399 HRMD 402
           + + 
Sbjct: 589 NDLQ 592



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 15/288 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++  +   PN +TY+ LI G C+ G+T+ A  L +EM+    E G+V  PD  
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGLV--PDTY 566

Query: 62  IYTTIIDGLCKEGFVDKAKELL--LQMKDKNIN------PDVVTYNSVIRGFCYANDSNE 113
            Y  +I GLC  G V +A+E +  LQ + + +N      P+VVTY ++I G C     ++
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDK 626

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+ L  EM+     PN  T++  +D L   G +E+A QL +++++ G   N   YN L+ 
Sbjct: 627 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 685

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  GR+  A E+ V+M   G   +  SYS +I  YC+  +++ A+ L+  ML++G+ P
Sbjct: 686 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
             V YN L  G     ++ +AF+L D+M R GV  +   Y + I G C
Sbjct: 746 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P     + +++GL +      A  L  ++    + PDV  Y +V+R  C   D   A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G   +V T++V +  LCKN ++ EA ++  L+   G+R +   Y TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                  +E+   M   G   +  + S L++G  K   I  A  L +++   G+ P++  
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L   + +  +++ A  LF+ M   G+  +   Y   ID  CK G +  AL     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  +  +  YS LI G CK G+L+ A  LF  +    L  +VV Y  +I   C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A  L+ +M  KG++P+   F  L+ G    N  ++  +L   M E N
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 148/316 (46%), Gaps = 35/316 (11%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MMD G+ P + T S +++ L +  +   A  L + ++  G+RP+ +VY  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             RA+E+   MES GC  +V +Y++ I G CKN+ +  A+ + + +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 241 LFIGLFEIHQVE-----------------------------------RAFKLFDEMQRHG 265
           L +GL ++ + E                                    AF L +++++ G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           VA   + Y   I+ +CK+G + EA  LF  +       +  +YS LID  CK G+L +A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                +    + A V  Y+ +I   C  GK+  A  LF +M A G+ P+ V + +L+ G 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 386 IRNNETSKVVELLHRM 401
            +  E      L H M
Sbjct: 471 CKEGELHNAFRLYHEM 486



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 114/214 (53%), Gaps = 13/214 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PNV+TY+ LINGLC+ G    A  L  EM+  N        P+   Y   +D L  E
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS------LPNQNTYACFLDYLTSE 656

Query: 74  GFVDKAKELLLQMKD---KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           G ++KA    +Q+ D   +    + VTYN +IRGFC      EA  + + M+D G+ P+ 
Sbjct: 657 GNIEKA----IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           +++S I+ E C+ G ++EA +L E M+  GV P+   YN L+ G C+TG + +A EL   
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           M   G K N  +Y+ LI+G C    +      +S
Sbjct: 773 MMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 35/248 (14%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G    + + S ++NG  + ++   AL L+ E++S G++P V  Y  +   L E+  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY-- 308
             RA ++   M+  G       Y  FI GLCKN  + EA+E+   L       D+ +Y  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 309 ---------------------------------SCLIDGLCKSGRLKIAWELFHSLPRGV 335
                                            S L+DGL K G +  A++L + + +  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +   +  YN +I+++C DGK+D+A  LF +M  KG+ P+ V ++ L+    +  +    +
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 396 ELLHRMDE 403
             L +M E
Sbjct: 411 HFLGKMTE 418


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 214/382 (56%), Gaps = 9/382 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++ T++ +I+GLC+TG    A ++ +++      +G+   P  V Y TIIDG CK G 
Sbjct: 182 SPDLFTFNIVISGLCKTGQLRKAGDVAKDI----RAWGLA--PSVVTYNTIIDGYCKRGR 235

Query: 76  VDK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
             +      LL +M +  I+P+ VT+N ++ G+C  +++  A R+F EM  QG+  +VVT
Sbjct: 236 AGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVT 295

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +S ++  LC  GK+EE  +L++ M  +G+ PN    N++++GFC  G +  A+    SME
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSME 355

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
               K NV +Y+IL++GY +  +++ AL++   M  KG++P    YN L  G        
Sbjct: 356 QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
               L DEM+  GV AD   Y   I  LC  G + +A++L   + ++  E    +Y+ +I
Sbjct: 416 SVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTII 475

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +G C+ G +K A+E+   + +G   A+VVTYN+ I  LC  GKM++ ++L  +M  KG+ 
Sbjct: 476 NGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLV 535

Query: 373 PDCVAFNTLMLGCIRNNETSKV 394
           P+ V ++T+  G +    T  V
Sbjct: 536 PNGVTYDTIKEGMMEKGYTPDV 557



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 6/289 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  ++   G  PN +T++ L+NG C+  +T  A+ +FEEM     + G+      V Y+
Sbjct: 244 ALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEM----KQQGIAA--SVVTYS 297

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++ GLC EG V++  +L+ +MKD  + P++ T NSV+ GFC      +A+     M  +
Sbjct: 298 ALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+PNVVT+++++D   +  KM++A  + E M   GVRPNA +YN L+ GF   G     
Sbjct: 358 NVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSV 417

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M   G + ++ +Y++LI   C   E+  A+ L  EML  G++P  +TYNT+  G
Sbjct: 418 SGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIING 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             E   ++ A+++   M++    A+   Y  FI  LC+ G + E  EL 
Sbjct: 478 YCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELL 526



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 3/350 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P A     ++  L     VD A+        + ++PD+ T+N VI G C      +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGK---MEEASQLLELMIQIGVRPNAFVYNTLMD 173
           +  ++   G+ P+VVT++ I+D  CK G+   M     LL+ M++ G+ PN   +N L++
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C       A  +F  M+  G   +V +YS L+ G C   ++E  + L  EM   G+ P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            + T N++  G  +   +  A    D M++  V  +   Y   +DG  +   + +AL + 
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +       + R Y+CLI G  ++G  +    L   +    + AD+VTYN++I ALC  
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           G++ KA  L  +M   G+ P  + +NT++ G           E+  RM++
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 6/283 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++K  G   +V+TYS L+ GLC  G     + L +EM     + G+V  P+   
Sbjct: 277 AVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEM----KDLGLV--PNLAT 330

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             ++++G CK+G +  A+  +  M+ KN+ P+VVTY  ++ G+   +   +A  +   M 
Sbjct: 331 LNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMS 390

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV+PN   ++ ++    +NG     S LL+ M   GVR +   YN L+   C+ G V 
Sbjct: 391 GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVR 450

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A +L   M  +G +    +Y+ +INGYC+   I+ A  + + M     +  VVTYN   
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFI 510

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
             L  + ++E   +L +EM   G+  +   Y T  +G+ + GY
Sbjct: 511 KCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGY 553



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 12/249 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++K  G  PN+ T ++++NG C+ G    A    + M   N       KP+ V
Sbjct: 311 EGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKN------VKPNVV 364

Query: 62  IYTTIIDGLCKEGFVDKAKELLL---QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            YT ++DG  +   +DK K+ L     M  K + P+   YN +I GF    D      L 
Sbjct: 365 TYTILVDGYRR---LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLL 421

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +GV+ ++VT++V++  LC  G++ +A +LL+ M+ +G+ P    YNT+++G+C  
Sbjct: 422 DEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEK 481

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +  A E+   ME    + NV +Y++ I   C+  ++E    L +EML KG+ P  VTY
Sbjct: 482 GNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTY 541

Query: 239 NTLFIGLFE 247
           +T+  G+ E
Sbjct: 542 DTIKEGMME 550



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 7/214 (3%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + + FS + L++     + ++ A   +   L + + P + T+N +  GL +  Q+ +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNG-----YIVEALELFRTLRILKCELDIRSYSCL 311
           +  +++  G+A     Y T IDG CK G     Y V+AL   + +       +  +++ L
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDAL--LKEMVEAGISPNEVTFNVL 264

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ++G CK      A  +F  + +  + A VVTY+ ++  LC++GK+++   L  +M+  G+
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGL 324

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P+    N+++ G  +    +     +  M+++N
Sbjct: 325 VPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKN 358



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 22/133 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G EP  +TY+T+ING C  G+   A  +   M  G     VV      
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVT----- 505

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   I  LC+ G +++  ELL +M +K + P+ VTY+++  G                M
Sbjct: 506 -YNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG----------------M 548

Query: 122 MDQGVQPNVVTFS 134
           M++G  P+V  F+
Sbjct: 549 MEKGYTPDVRGFT 561


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 219/400 (54%), Gaps = 15/400 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++    C PN +T++T I   C+ G    A+ L + M     ++G  C PD V
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM----PQYG--CTPDVV 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+++G  ++G VD A ELL  M  K   P+ + YN+ ++G C A    +  +L +EM
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEM 340

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TFS++   LC+NG ++ A ++LE M + G RP+A +YNTL+  F   GRV
Sbjct: 341 VRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRV 400

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   + SM C  +V S++  + G C+ +  + A  L  +ML +      +T+N L
Sbjct: 401 DDALKL---LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNIL 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A ++F++M ++G   D   Y + I+GL + G +  A+ELF+++    C
Sbjct: 458 IDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PC 514

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI  Y+ ++ GLC++ R + A EL  ++ R     + +T+NI+I++LC  G +D+A +
Sbjct: 515 KPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIE 574

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  M   G  PD   +N L+ G            LL  M
Sbjct: 575 VFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM 614



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 197/400 (49%), Gaps = 17/400 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   LKA G   + ++++TL+ G CR G    A  L                 + V
Sbjct: 130 DAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAAAGLSGAA-------NVV 181

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+G C+ G +  A  L+  M    + PD  TYN+V+ G C A    +A+ L  EM
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VTF+  +   C+NG ++ A QLL+ M Q G  P+  +Y+TL++GF   GRV
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   +  M CK N   Y+  + G C  +  E    L  EM+ K   P   T++ L
Sbjct: 299 DDAIEL---LNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V+ A ++ ++M ++G   D   Y T I    + G + +AL+L  +   + C
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS---MPC 412

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ S++  + GLC++ R   A EL   + R       +T+NI+I +LC +G+++ A +
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  M   G  PD V +++L+ G          +EL   M
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM 512



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 181/412 (43%), Gaps = 53/412 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  ++  +GC P+V+ YSTL+NG    G    A+ L           G++CKP+ +
Sbjct: 265 RAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLN---------GMLCKPNTI 315

Query: 62  IYTTIIDGLC-----------------------------------KEGFVDKAKELLLQM 86
            Y   + GLC                                   + G VD A E+L QM
Sbjct: 316 CYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQM 375

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                 PD V YN++I  F      ++A +L   M      P+V++F+  +  LC+  + 
Sbjct: 376 HKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERW 432

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +L+  M++         +N L+D  C  GRVN A E+F  M   GC  ++ +YS L
Sbjct: 433 DDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSL 492

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING  +   +E A+ L+  M     KP +  YN +  GL    + E A +L   M R   
Sbjct: 493 INGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDC 549

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   +   I+ LC+ G +  A+E+F  +       DI +Y+ LI+G  + GRL  A  
Sbjct: 550 PPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARR 609

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           L  ++       D V+YN  +  LC   +  +A ++  +M      P+ V F
Sbjct: 610 LLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 15/227 (6%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +T++ LI+ LC+ G    A+ +FE+M     ++G  C PD V Y+++I+GL ++G V+ A
Sbjct: 452 MTFNILIDSLCQNGRVNNAIEVFEQM----PKYG--CTPDIVTYSSLINGLSEQGLVESA 505

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            EL   M  K   PD+  YN+V++G C A    +A  L   M  +   PN +TF+++++ 
Sbjct: 506 IELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINS 562

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LC+ G ++ A ++ E M + G  P+ F YN L++GF   GR++ A+ L   + +M CK +
Sbjct: 563 LCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRL---LSTMSCKPD 619

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY---NTLFI 243
             SY+  + G C+ +  + A  + +EML     P  VT+   N LF+
Sbjct: 620 AVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFV 666



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L + +    C PN IT++ LIN LC+ G    A+ +FE+M     ++G    PD  
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQM----PKYGST--PDIF 589

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G  ++G +D A+ LL  M  K   PD V+YNS ++G C A    EA+ +  EM
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWKEAEEVVAEM 646

Query: 122 MDQGVQPNVVTFSVIMDELCKNG 144
           +     PN VTF         NG
Sbjct: 647 LRMKCPPNEVTFKYANRLFVPNG 669



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 5/169 (2%)

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV  N L   L    ++  A ++ D ++  G AAD  ++ T + G C++G + +A E   
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAG-AADPVSHNTLVAGYCRDGRLADA-ERLL 169

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
               L    ++ +Y+ LI+G C+SGRL  A  L  S+P   +  D  TYN ++  LC   
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGAR 226

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + + A  L  +M      P+ V F T +    +N    + V+LL RM +
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQ 275


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 218/433 (50%), Gaps = 37/433 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K   C PNV+TY+TL+NGL + G    A  +F EM   N      C PDA+
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN------CSPDAI 393

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGL K G  D A  L  +MKD+ + P++ TYN +I     A    EA +LF ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------PNA---------- 165
            +QG  P+V T++ ++D L K G+M++   +++ M++ G         NA          
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513

Query: 166 ---------------FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
                            YNTLM  F   G V+ A +L   M+   C   V +Y+ L++G 
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K   ++ A+SL  EM  +G +P+VVTY++L    ++  Q E +  LFDEM R G  AD 
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADV 633

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+ LCK+  + +AL++F  ++    E  + +Y  L+  L K  ++  A ++F+ 
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNE 693

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L    L+ D   YNIM++ L    ++D+A  L   M+ + + PD   + +L+ G  ++  
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753

Query: 391 TSKVVELLHRMDE 403
             +   +  +M E
Sbjct: 754 LEEAFNMFTKMTE 766



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 218/402 (54%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  +++  GCEP+V+TYS+L+    +      +L+LF+EM+         C  D  
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG------CVADVS 634

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+ LCK   VD+A ++  +MK++ + P +  Y +++         + A ++F E+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  + P+   ++++++ L K+ +++EA +L++ M    + P+ F Y +L+DG   +GR+
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M   G + +V +Y+ L++   K  ++  AL ++  M  K   P VVTY++L
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +VE A+  F+     G   +   Y + ID   K G +  ALELF  ++  +C
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ L+ GL K+GRL +A +L   + +   + D+VTYNI+I  +   G +D+A  
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            F  M+ KG+ PD + F +L+    + ++  +  EL   M+E
Sbjct: 935 YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 202/380 (53%), Gaps = 6/380 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  +F ++K  G EP +  Y TL++ L +      AL +F E+     E  +V  PD  
Sbjct: 651  QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL----QESSLV--PDTF 704

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +Y  +++GL K   VD+A +L+  MK++NI PD+ TY S++ G   +    EA  +F +M
Sbjct: 705  VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G +P+VV ++ +MD L K GK+  A  +   M +    P+   Y++L+D     GRV
Sbjct: 765  TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRV 824

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A   F +  S GC  NV  YS LI+ + K   ++ AL L+ EM  +   P +VTYN L
Sbjct: 825  EEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNL 884

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              GL +  ++  A KL +EM++ G   D   Y   IDG+ K G + EA   F+ ++    
Sbjct: 885  LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI 944

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              D+ +++ LI+ L K  +L  A ELF S+        VVTYN++I  L   GK+ +A  
Sbjct: 945  VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAM 1004

Query: 362  LFLDMEAKGVAPDCVAFNTL 381
            +F +M+ KG  PD +    +
Sbjct: 1005 IFHEMKVKGCMPDGITIGIM 1024



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 207/385 (53%), Gaps = 8/385 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ITY+TL++     GH   A+ L E M          C P  V YTT++DGL K G +D+A
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHE------CIPTVVTYTTLVDGLGKAGRLDEA 582

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             LL +M+ +   P VVTY+S++  F   +   E+  LF EM+ +G   +V T+S++++ 
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK+  +++A  +   M + G+ P    Y TL+       +++ A ++F  ++      +
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            F Y+I++NG  K+  ++ A  L   M ++ I P + TY +L  GL +  ++E AF +F 
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M   G   D  AY + +D L K G +  AL +FR +   +C  D+ +YS LID L K G
Sbjct: 763 KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 320 RLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           R++ A+  F +S+ +G    +V  Y+ +I +    G +D+A +LF +M+ +   P+ V +
Sbjct: 823 RVEEAYYFFENSISKGC-TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           N L+ G  +    +   +LL  M++
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEK 906



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 217/429 (50%), Gaps = 25/429 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---------- 51
           EA  LF  LK  G  P+V TY+TLI+ L + G     L + +EM+   GE          
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 52  -FGVVCKPDAVI--------------YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
             G +   D  +              Y T++      G VD+A +LL  MK     P VV
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           TY +++ G   A   +EA  L  EM  QG +P+VVT+S +M    K  + EE+  L + M
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ G   +   Y+ +++  C +  V++A ++F  M+  G +  + +Y  L++   K+++I
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL +++E+    + P    YN +  GL + ++V+ A KL D M+   +  D + Y + 
Sbjct: 685 DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +DGL K+G + EA  +F  +     E D+ +Y+ L+D L K G+L  A  +F ++ +   
Sbjct: 745 LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + DVVTY+ +I +L  +G++++A+  F +  +KG  P+   +++L+    +     + +E
Sbjct: 805 VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALE 864

Query: 397 LLHRMDERN 405
           L   M  R 
Sbjct: 865 LFEEMQRRQ 873



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 37/410 (9%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           ++L+     T +   AL +F +M +    FG  C P   +Y  +++ L K GF   A  +
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKS----FG--CNPSTNMYNFVLELLVKGGFYHSAVIV 274

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
             ++    I PD  T+   +  F  +   + A     EM+  G+ P V TF+V++D L K
Sbjct: 275 FGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVK 334

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           +G ++EA +    M  +   PN   Y TL++G    GR+  A E+FV M+   C  +  +
Sbjct: 335 SGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA 394

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI+G  K  E + A  L+ EM  +G+ P + TYN +   L +  +   A++LF +++
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-------------------------- 296
             G   D + Y T ID L K G + + L + + +                          
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514

Query: 297 RILKCELDIRS-----YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
            +    L  +S     Y+ L+     +G +  A +L   + +   I  VVTY  ++  L 
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G++D+A  L  +ME +G  P  V +++LM    + ++  + + L   M
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 31/370 (8%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I  L      D   ++L  M  +     +    S++R F   N+ + A  +F +M 
Sbjct: 185 YTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK 244

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+   ++ +++ L K G    A  +   + Q  ++P+A  +   +  F  +GR++
Sbjct: 245 SFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLD 304

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E    M   G    V ++++LI+   K+  I+ A   ++ M +    P VVTY TL 
Sbjct: 305 PAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLV 364

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  ++E A ++F EM+ +  + D  AY T IDGL K G    A  LF+ ++     
Sbjct: 365 NGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV 424

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++R+Y+ +I  L K+GR   AW+LFH L     + DV TYN +I  L   G+MDK   +
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 363 FLDMEAKG----VAPDC---------------------------VAFNTLMLGCIRNNET 391
             +M  KG    ++ D                            + +NTLM   I N   
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHV 544

Query: 392 SKVVELLHRM 401
            + V+LL  M
Sbjct: 545 DEAVKLLEVM 554



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 149/310 (48%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           V TY  +I+    A +++   ++   M  +G + ++   + ++        +  A ++  
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFN 241

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  P+  +YN +++     G  + A  +F  +     + +  ++ I ++ + ++ 
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A     EM+  GI P V T+  L   L +   ++ A K F+ M+    + +   Y 
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYT 361

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T ++GL K G + EA E+F  ++   C  D  +Y+ LIDGL K+G   +A  LF  +   
Sbjct: 362 TLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L+ ++ TYNIMI  L   G+  +A  LF D++ +G  PD   +NTL+    +  +  KV
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 395 VELLHRMDER 404
           + ++  M E+
Sbjct: 482 LAIIKEMVEK 491



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 134/280 (47%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G    V T+++++  L    + +   Q+L  M + G R +  +  +L+  F  T  V+ A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E+F  M+S GC  +   Y+ ++    K      A+ ++ ++    I+P   T+      
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +++ A +   EM + G+      +   ID L K+G I EA + F  ++ L+C  +
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L++GL K+GRL+ A E+F  +       D + YN +I  L   G+ D A  LF 
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M+ +G+ P+   +N ++    +     +  +L H + E+
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 224/474 (47%), Gaps = 80/474 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  + A G  PN + Y++LI+G  ++G    A +LF+EM+          +PD +
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG------YRPDVI 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK G  ++A +   +M      P+VVTY ++I+G         A R+   M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           +  G  P+ VT+  ++D  CK G+++EA+QLL+ + +    PN  +Y++L++G C     
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486

Query: 177 -------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                                           TGR++ A  +F  M S GCK +  +Y+I
Sbjct: 487 EKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546

Query: 206 LINGYCKNKE--IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           LING C+++E  +E A +L  ++   G  P  VTY  L IGL +I +V+RA K+ +E   
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL-------- 315
            G  AD  AY     GLC  G +  A+ LF+ +       D  +Y C+I+GL        
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLED 666

Query: 316 ---------------------------CKSGRLKIAWELFHS-LPRGVLIADVVTYNIMI 347
                                      C +G +  A+  F S L RG L+  V+ Y+ +I
Sbjct: 667 ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALI 726

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           H  C   K+D A  LF DM ++G  P  V   +L  G +R+ +T K  ELL  M
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 216/442 (48%), Gaps = 43/442 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM+      G V  PD  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRA 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++T ++  L K   V +A+E+  QM+     PD + YN++I G   A  + EA ++   M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P  VT+ ++++ LCK G +E A +L  +M   G RPN+ +Y +L+ GF  +GR+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G + +V +++++I+G CK+   E A   + EM+  G KP VVTY T+
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +I +V  AF++   M  HG   D+  Y   +DG CK G + EA +L   L     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 302 ELDIRSYSCLID------------------------------------GLCKSGRLKIAW 325
             +++ YS L++                                    GLCK+GRL  A 
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALC--ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            +F  +       D  TYNI+I+ LC   + ++++A  L  D+E  G  PD V +  L +
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G  +  E  + V++L     R 
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRG 608



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 212/438 (48%), Gaps = 47/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA  F ++   GC+PNV+TY+T+I GL + G    A  + + MI         C PD+V
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG------CFPDSV 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS---------- 111
            Y  ++DG CK G +D+A +LL ++   + +P++  Y+S++ G C               
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ 496

Query: 112 --------------------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN-- 143
                                     +EA R+F  M+ +G +P+  T++++++ LC++  
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            ++E A  LL  + ++G  P+A  Y  L  G C  G V+RA ++     S G   +V +Y
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L  G C   +++ A+SL+ EM+ +G  P    Y  +  GL ++ ++E A K FDEM  
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIG 676

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRL 321
            G       Y   +  LC  G + EA   F ++ + + EL   +  Y  LI G CK+ ++
Sbjct: 677 KGQKPTVATYTALVQALCHAGNVDEAFHRFESM-LARGELVGSVMIYDALIHGFCKALKV 735

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +LF  +     +   VT   +   L   GK +KA +L  +M A G  P    F  +
Sbjct: 736 DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795

Query: 382 MLGCIRNNETSKVVELLH 399
           + G  +++E+ K+++L+ 
Sbjct: 796 LDGLRKSDESGKLLKLVQ 813



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 1/346 (0%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y  +++ L  E    +   +  +M    I P+  ++N +IR F     +++A   F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCL 177
             M  +  +P++ TF +++D LCK G  E+A ++   M+ +G V P+  ++  ++     
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             RV  A+E+F  ME  G   +  +Y+ +I+G  K    + AL +   ML+K   PT VT
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L   L +   +ERA +LF  M   G   ++  Y + I G  K+G + EA  LF  + 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+ +++ +IDGLCKSG  + A + F  + RG    +VVTY  +I  L   G++ 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +   M A G  PD V +  L+ G  +     +  +LL  +D+
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 1/278 (0%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G Q +V T++ +M+ L       +   + E M++ G+ PN F +N L+  F  T R + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFI 243
              F  M+   CK ++ ++ IL++  CK    E A  ++ EM++ G + P    +  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            L +  +V+ A ++F +M++ G   D  AY T IDGL K G+  EAL++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
              +Y  L++ LCK+G L+ A ELF  +       + V Y  +IH     G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +M   G  PD +    ++ G  ++    +  +    M
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 44/297 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV--ALNLFEEMINGNGEFGVVCKPD 59
           EA  +F ++ + GC+P+  TY+ LINGLCR+    V  A  L  ++        V   PD
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK------VGYLPD 577

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           AV YT +  GLCK G VD+A ++L +   +  N DVV Y ++  G CY    + A  LF 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP---------------- 163
           EM+ QG  P+   +  I++ L K  K+E+A +  + MI  G +P                
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 164 --------------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
                               +  +Y+ L+ GFC   +V+ A +LF  M S G      + 
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           + L +G  ++ + E A  L  EM + G  P   T+  +  GL +  +  +  KL  E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F YN LM+        ++   +   M   G   N FS++ILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
            A++ +  M  K  KP + T+  L   L +    E+AF++F EM   G V  D   +   
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +  L K   + EA E+F  +       D  +Y+ +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +   VTY I++++LC  G +++A +LF  M A G  P+ V + +L+ G  ++    +   
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 397 LLHRMDE 403
           L   M E
Sbjct: 352 LFDEMVE 358


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ ITY+T +NGLC+  H   AL + + M+    +      PD   Y  +++ LC
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLC 332

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +++AK +L QM D+   PD+ T+N++I   C  N   EA  L  ++  +GV P+V 
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G    A +L E M   G  P+   YNTL+D  C  G++ +A +L   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI    +T+NTL  GL +  ++
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + AF+L ++M   G+  +   Y + +   CK G I +A ++  T+     E+D+ +Y  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A ++   +    +      YN ++ +L     +  A  LF +M   G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 372 APDCVAFNTLMLGCIR 387
            PD + +  +  G  R
Sbjct: 633 PPDALTYKIVFRGLCR 648



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 7/374 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY+ ++N LC+ G    A  +  +M++        C PD   + T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +++A +L  Q+  K ++PDV T+N +I   C   D + A RLF EM + G  P+ VT+
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  A+E+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P  +TYN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M  +G   D   Y T I+GLCK G    AL++ R +RI       ++Y+ ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +   ++ A  LF  +       D +TY I+   LC   G + +A D  L+M  KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 373 PDCVAFNTLMLGCI 386
           P+  +F  L  G +
Sbjct: 670 PEFSSFRMLAEGLL 683



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 212/397 (53%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++++++ A G +P+V+T++TL+  LCR      A+ + EEM       GV   PD   +T
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM----SSRGVA--PDETTFT 220

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +   VT N +I G+C      +A     + +  
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ +T++  ++ LC+N  +  A +++++M+Q G  P+ F YN +++  C  G++  A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ P V T+N L   
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++     A +LF+EM+  G   D   Y T ID LC  G + +AL+L + +    C   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D K+D A +L  
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M ++G+ P+ + +N+++    +  +  K  ++L  M
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 202/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K +    GC    +T + LING C+ G    AL   ++ I    E      PD +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE------PDQI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ++GLC+   V  A +++  M  +  +PDV TYN V+   C      EAK +  +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P++ TF+ ++  LC   ++EEA  L   +   GV P+ + +N L++  C  G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M++ GC  +  +Y+ LI+  C   ++  AL L  +M S G   + +TYNT+
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++FD+M   G++ +   + T IDGLCK+  I +A EL   +     
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + Y+ L+N L       +  +++ EM    G  G+  KPD V + T++  LC+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCR 193

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M  + + PD  T+ ++++GF        A R+   M++ G     VT
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT ++G C    V  A ++   M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  P + T+NTL   L   +++E
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   GV+ D + +   I+ LCK G    AL LF  ++   C  D  +Y+ LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L   +         +TYN +I  LC   ++++A ++F  M+ +G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + + FNTL+ G  ++ +     EL+++M
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQM 522



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V T++ LIN LC+ G   +AL LFEEM N        C PD V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID LC  G + KA +LL  M+        +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N +TF+ ++D LCK+ K+++A +L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++PT   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           FG+  + D V+Y  +++ L +   +   + +  +M  + I PDVVT+N++++  C A+  
Sbjct: 140 FGI--QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A  +  EM  +GV P+  TF+ +M    + G +E A ++   M+++G        N L
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  +Y+  +NG C+N  +  AL +   M+ +G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P V TYN +   L +  Q+E A  + ++M   G   D   + T I  LC    + EAL+
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R + +     D+ +++ LI+ LCK G   +A  LF  +       D VTYN +I  LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + GK+ KA DL  DME+ G     + +NT++ G  +     +  E+  +MD
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P    Y  +IR        +  K L  EM  +G Q  +      +D        ++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 153 L--ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +  +L    G++ +  VYN L++      ++   + ++  M + G K +V +++ L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++  A+ +  EM S+G+ P   T+ TL  G  E   +E A ++   M   G +A  
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                 I+G CK G + +AL   +       E D  +Y+  ++GLC++  +  A ++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +     DV TYNI+++ LC +G++++A  +   M  +G  PD   FNTL+      N 
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 391 TSKVVELLHRM 401
             + ++L  ++
Sbjct: 372 LEEALDLARQV 382



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N+ + LF      G + +   Y+ L+N   +  +++   S+YSEM ++GIKP VVT+NT
Sbjct: 133 LNQLQPLF------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L   HQV  A  + +EM   GVA D   + T + G  + G I  AL +   +  + 
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     + + LI+G CK GR++ A              D +TYN  ++ LC +  +  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  +G  PD   +N ++    +N +  +   +L++M +R
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 3/201 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L+    +  + + AL + +  L++    P    Y  +   L  +  ++    L  EM+R 
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELF--RTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           G         +F+D         +A++L   +   +   + D   Y+ L++ L +  ++K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +   ++  +    +  DVVT+N ++ ALC   ++  A  +  +M ++GVAPD   F TLM
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 383 LGCIRNNETSKVVELLHRMDE 403
            G +        + +  RM E
Sbjct: 224 QGFVEEGSIEAALRVKARMLE 244


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 213/434 (49%), Gaps = 30/434 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVV- 55
           EA  LF +LK  GC PNV+ Y+ +I+GL + G     L  FEEM     +     + VV 
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PD + YTT+IDG  K   +D+A++LL  M  K   
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTY S++ GFC  +  NEAK +  +M ++G +P +  F+ ++      G+ EEA Q+
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  P+  +Y +L+D    TGRV  A+ +F SM   GC  +  +Y  +I  + K
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 365

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  +   M   G+ P    YN+L  G  ++ +V++AF ++D M   G+  +   
Sbjct: 366 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 425

Query: 273 YRTFIDGLCKNGYIVEALELFRT-LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +   + GL K+G    A  LF+  L   +    + SY+ LIDGL K+GR+  A+  F  +
Sbjct: 426 FNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM 485

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +I +  TY  +I++L   G++ +A  L  DM   GV PD  A++ L+ G I ++  
Sbjct: 486 IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMV 545

Query: 392 SKVVELLHRMDERN 405
               ++   M +R 
Sbjct: 546 DTAWDVFQEMMKRG 559



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 195/389 (50%), Gaps = 7/389 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +VI+Y+T+I GL  +     A  LFEE+          C P+ V YT +IDGL K G ++
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAG------CSPNVVAYTAVIDGLLKAGRIE 160

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
              +   +M   +  P   TY  VI G C A    +A ++F +M+ +G  P+ +T++ ++
Sbjct: 161 DGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLI 220

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D   K  KM+EA +LL++M+  G  P A  Y +++ GFC    +N AKE+   M   GC+
Sbjct: 221 DGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE 280

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             +F ++ L++ Y      E A  + +EM ++G  P V+ Y +L   LF   +V  A  +
Sbjct: 281 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 340

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           FD M   G A D   Y T I    K G +  A E+   +       D  +Y+ L+DG  K
Sbjct: 341 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 400

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCV 376
             R+  A+ ++  +    +  + VT+N+++H L  DGK D+A  LF +M E + V P  V
Sbjct: 401 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLV 460

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  L+ G  +    S+       M +R 
Sbjct: 461 SYTILIDGLGKAGRVSEAFLQFQEMIDRG 489



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 198/403 (49%), Gaps = 49/403 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   GC P+ ITY+TLI+G  +      A  L + M+    E      P AV
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAV 249

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP---------------------------- 93
            Y +I+ G CK   +++AKE++ QM+++   P                            
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309

Query: 94  -------DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                  DV+ Y S+I          EA+ +F  M+++G  P+ +T+  I+    K G +
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A ++LELM + GV P+ F YN+LMDG+    RV++A  ++  M + G K N  ++++L
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++G  K+ + + A SL+ EML K  + PT+V+Y  L  GL +  +V  AF  F EM   G
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +   Y + I  L K G I EA +L   +  L    D+++YS LI GL  S  +  AW
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           ++F  + +     + VTY ++     A G+        LD+EA
Sbjct: 550 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA-------LDLEA 585



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 193/420 (45%), Gaps = 39/420 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GCEP +++Y+T+I+GL        A   F  MI+ NG     C+PD + +TT+I G CK 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NG-----CEPDVIAFTTLIHGFCKA 55

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND----------------------- 110
           G      +LL Q   K   PDV  Y SVI G+C A D                       
Sbjct: 56  GQPQVGHKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTV 114

Query: 111 ---------SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
                     +EA  LF E+   G  PNVV ++ ++D L K G++E+  +  E M     
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P    Y  ++DG C    +  A ++F  M   GC  +  +Y+ LI+G+ K  +++ A  
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L   ML+KG +PT VTY ++  G  ++  +  A ++  +M+  G     + + + +    
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
             G   EA ++   +    C  D+  Y+ LID L  +GR+  A  +F S+       D +
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY  +I      G ++ A ++   M   GV PDC A+N+LM G ++     +   +  RM
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 4/314 (1%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P +V+YN+VI G    +  +EA + F  M+D G +P+V+ F+ ++   CK G+ +   +
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           LL   ++   RP+ F+Y +++ G+C  G ++      V+ ++     +V SY+ +I G  
Sbjct: 64  LLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKA---SLDVISYTTVIKGLA 119

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +K I+ A  L+ E+ + G  P VV Y  +  GL +  ++E   K F+EM          
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   IDGLCK   + +A ++F  +    C  D  +Y+ LIDG  K+ ++  A +L   +
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                    VTY  ++H  C    +++A ++   M  +G  P    F +L+   +     
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 392 SKVVELLHRMDERN 405
            +  ++L  M  R 
Sbjct: 300 EEAYQVLTEMTARG 313



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 4/281 (1%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P +V+++ ++  L    KM+EA +    MI  G  P+   + TL+ GFC  G+    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +L ++      + +VF Y+ +I+GYCK  +++     Y   ++      V++Y T+  G
Sbjct: 62  HKL-LNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  +++ A +LF+E++  G + +  AY   IDGL K G I + L+ F  +    C   
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +IDGLCK+  L  A ++F  + +   + D +TY  +I       KMD+A  L  
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M  KG  P  V + +++ G  + +  ++  E++ +M ER 
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 278


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 204/389 (52%), Gaps = 10/389 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P  + ++ +I GLCR G    AL ++ +M + +        PD + YT ++ GL K   +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-------PPDFLTYTKLVHGLSKARRL 55

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A ++L +M      PD  T   V++  C  +  ++A+ L  EM+ +G+  N +T+S +
Sbjct: 56  RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D LCK  +++EA  L+E M + G  P    YN+++ GFC   RV+ A      M + GC
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++ +Y+ LI G+CK++++   L L  E+  +G  P +VTY+T+  GL +  ++  A  
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F+EM     A     Y + I G C+ G + EA+ L   +   KC  D+ +Y+ L+   C
Sbjct: 236 IFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL  A+ELF  +    L  DVVT+  ++  LC +G+M+ A +L  ++  +G  P   
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +N ++ G  + N+  K  EL+     R 
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRSRG 381



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 203/402 (50%), Gaps = 11/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G   N ITYS L++GLC+      A+ L E M     E G  C P  V
Sbjct: 92  DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETM----AERG--CAPTVV 145

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +II G C+   VD+A   + QM  +  +PD++TY ++I GFC + D      L  E+
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV 205

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P++VT+S ++D LCK G++ +A  + E   ++   P A  YN+L+ G+C  G +
Sbjct: 206 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDM 262

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M    C  +V +Y+ L++ +CK   ++ A  L+ +M++  + P VVT+ +L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A +L +E+ R G     + Y   +DG CK   + +A EL    R    
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKA 359
             +  +Y+ L+ G C++GR   A +    L    G     V  Y I++ ALC DG+ D A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              + +M  +G  P    F T++    + ++  +  ELL  M
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 205/391 (52%), Gaps = 11/391 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  T + ++  LC       A  L EEM++           +A+ Y+ ++DGLCK   +
Sbjct: 72  PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG------MAANAITYSALVDGLCKCERL 125

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  L+  M ++   P VVTYNS+I GFC A   +EA     +M+ +G  P+++T++ +
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   CK+  +    +LL  + + G  P+   Y+T++DG C  GR+  A ++F   E M C
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSC 242

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                +Y+ LI GYC+  +++ A+ L  +M+     P VVTY TL     ++ +++ A++
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF +M  + ++ D   + + +DGLC  G + +ALEL   +    C   I +Y+C++DG C
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK-GVAPDC 375
           K+ +++ A EL         + + VTYNI++   C  G+ D+A      + ++ G  P  
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 422

Query: 376 VAFNTLMLGCI-RNNETSKVVELLHRMDERN 405
           VA   ++L  + R+  T   V+    M +R 
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRG 453



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 185/374 (49%), Gaps = 11/374 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   +   GC P V+TY+++I G CR      A    E+M+         C PD +
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG------CHPDII 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G CK   V +  ELL ++  +   PD+VTY++VI G C A    +A  +F EM
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P  +T++ ++   C+ G M+EA +LL  M+     P+   Y TLM  FC  GR+
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ELF  M +     +V +++ L++G C    +E AL L  E+  +G  PT+ TYN +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-- 299
             G  + +QV +A +L  + +  G   +T  Y   + G C+ G   +AL+    L     
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 417

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C   +  Y+ ++D LC+ GR   A + +  + +   +    T+  ++ ALC   +  +A
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477

Query: 360 HDLFLDMEAKGVAP 373
           H+L  +M   G  P
Sbjct: 478 HELLEEMIKYGHTP 491



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 166/330 (50%), Gaps = 46/330 (13%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   G  P+++TYST+I+GLC+ G    A+++FEEM          C P A+ Y +
Sbjct: 201 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---------SCAPTAITYNS 251

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G C+ G +D+A  LL +M D    PDVVTY +++  FC     ++A  LF +M+   
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+VVTF+ ++D LC  G+ME+A +LLE + + G  P  + YN ++DG+C   +V +A+
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371

Query: 186 ELFVSMESMG-------------------------------------CKHNVFSYSILIN 208
           EL     S G                                     C  +V  Y+I+++
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
             C++   + A+  Y EM+ +G  P   T+ T+   L + HQ ++A +L +EM ++G   
Sbjct: 432 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
                   +   C+ G I +A EL   LR+
Sbjct: 492 GPGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 37/349 (10%)

Query: 91  INPDVVTYNSVIRGFCYA-------------NDS---------------NEAKRL----- 117
           +NP  + +N VI G C A             ND+               ++A+RL     
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 118 -FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
              EM+     P+  T +V++  LC   ++++A +L+E M+  G+  NA  Y+ L+DG C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              R++ A  L  +M   GC   V +Y+ +I G+C+ + ++ A     +M+++G  P ++
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L  G  +   V R  +L  E+ R G   D   Y T IDGLCK G + +A+++F   
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE- 239

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             + C     +Y+ LI G C++G +  A  L   +       DVVTY  ++ A C  G++
Sbjct: 240 --MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D A++LF  M A  ++PD V F +L+ G          +ELL  +  R 
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 204/376 (54%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ ITY+T +NGLC+ GH   AL + + M+    +      PD   Y  +++ LC
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLC 336

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +++AK +L QM ++   PD+ T+N++I   C  N   EA  L  ++  +G+ P+V 
Sbjct: 337 KNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVY 396

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G  + A +L E M   G  P+   YNTL+D  C  G++ +A +L   M
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI    +T+NTL  GL +  ++
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A +L  +M   G+  +   Y + +   CK G I +A ++ +T+     E+D+ +Y  L
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A +L   +    + A    YN +I +L        A +LF +M   G 
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE 636

Query: 372 APDCVAFNTLMLGCIR 387
            PD   +  +  G  R
Sbjct: 637 PPDAFTYKIVFRGLCR 652



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 213/396 (53%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +++++   G +P+V+T++TL+  LCR      A+ + EEM +     GV   PD   +TT
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSS----GVA--PDETTFTT 225

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G  +EG +  A  +  +M +   +P  VT N +I G+C      +A     + +  G
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANG 285

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P+ +T++  ++ LC+NG +  A +++++M+Q G  P+ F YN +++  C  G++  AK
Sbjct: 286 FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 345

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ P V T+N L   L
Sbjct: 346 GILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINAL 405

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++   + A +LF+EM+  G   D   Y T ID LC  G + +AL+L + +    C    
Sbjct: 406 CKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRST 465

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D ++D A+ L   
Sbjct: 466 VTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ 525

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M ++G+ P+ + +N+++    +  +  K  ++L  M
Sbjct: 526 MISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 202/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ + G  P+  T++TL+ G    G    AL +   M+    E G  C P  V 
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML----EMG--CSPTKVT 257

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              +I+G CK G V+ A   + Q       PD +TYN+ + G C       A ++   M+
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+V T++++++ LCKNG++EEA  +L  M++ G  P+   +NTL+   C   R+ 
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +   G   +V++++ILIN  CK  + + AL L+ EM S G  P  VTYNTL 
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L  + ++ +A  L  EM+  G    T  Y T IDGLCK   I EA E+F  + +    
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LIDGLCK  R+  A +L   +    L  + +TYN ++   C  G + KA D+
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M A G   D V + TL+ G  +   T   ++LL  M
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 205/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K +    GC P  +T + LING C+ G    AL   ++ I  NG      +PD +
Sbjct: 238 AALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI-ANG-----FEPDQI 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ++GLC+ G V  A +++  M  +  +PDV TYN V+   C      EAK +  +M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P++ TF+ ++  LC   ++EEA  L   +   G+ P+ + +N L++  C  G  
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M+S GC  +  +Y+ LI+  C   ++  AL L  EM S G   + VTYNT+
Sbjct: 412 QLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++FD+M   G++ +   + T IDGLCK+  I +A +L   +     
Sbjct: 472 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGL 531

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 532 QPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALK 591

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   M  KG+     A+N ++    R N T   + L   M E
Sbjct: 592 LLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + Y+ L+N L       +   ++ EM    GE G+  KPD V + T++  LC+
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM----GERGI--KPDVVTFNTLMKALCR 197

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M    + PD  T+ ++++GF        A R+   M++ G  P  VT
Sbjct: 198 AHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVT 257

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT ++G C  G V  A ++   M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  P + T+NTL + L   +++E
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   G++ D + +   I+ LCK G    AL LF  ++   C  D  +Y+ LI
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L   +         VTYN +I  LC   ++++A ++F  M+ +G++
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + + FNTL+ G  ++       +L+ +M
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQM 526



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V T++ LIN LC+ G   +AL LFEEM +        C PD V
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG------CTPDEV 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID LC  G + KA +LL +M+        VTYN++I G C      EA+ +F +M
Sbjct: 432 TYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM 491

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N +TF+ ++D LCK+ ++++A+QL+  MI  G++PN   YN+++  +C  G +
Sbjct: 492 DLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDI 551

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL L   M  KG++ T   YN +
Sbjct: 552 KKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPV 611

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  +    A  LF EM   G   D + Y+    GLC+  G I EA +    +    
Sbjct: 612 IQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKG 671

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 672 FIPEFSSFRMLAEGLLNLG 690



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 170/330 (51%), Gaps = 3/330 (0%)

Query: 75  FVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           FVD A +L+L   D    I  D V YN ++      +     + ++ EM ++G++P+VVT
Sbjct: 129 FVD-AVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVT 187

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+ +M  LC+  ++  A  +LE M   GV P+   + TLM GF   G +  A  +   M 
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML 247

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            MGC     + ++LINGYCK   +E AL    + ++ G +P  +TYNT   GL +   V 
Sbjct: 248 EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG 307

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A K+ D M + G   D + Y   ++ LCKNG + EA  +   +    C  DI +++ LI
Sbjct: 308 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             LC   RL+ A +L   +    L  DV T+NI+I+ALC  G    A  LF +M++ G  
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           PD V +NTL+       +  K ++LL  M+
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALDLLKEME 457



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 103/210 (49%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G + +   Y+ L+N   +  +++   ++YSEM  +GIKP VVT+NTL   L   HQV  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             + +EM   GVA D   + T + G  + G I  AL +   +  + C     + + LI+G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK GR++ A              D +TYN  ++ LC +G +  A  +   M  +G  PD
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              +N ++    +N +  +   +L++M ER
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVER 354



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 7/158 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   + A G E +V+TY TLINGLC+ G T VAL L    + G    G+   P A 
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKL----LRGMRIKGMRATPKA- 607

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIE 120
            Y  +I  L +      A  L  +M +    PD  TY  V RG C    S  EA    +E
Sbjct: 608 -YNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLE 666

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M+D+G  P   +F ++ + L   G  +   + +E++I+
Sbjct: 667 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIE 704



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 2/149 (1%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF--RTLRILKCELDIRSYSCLIDG 314
           L  EM+R G         +F++   +    V+A++L   +   +   + D   Y+ L++ 
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNV 159

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           L +  ++K+   ++  +    +  DVVT+N ++ ALC   ++  A  +  +M + GVAPD
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              F TLM G +        + +  RM E
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLE 248


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ ITY+T +NGLC+  H   AL + + M+    +      PD   Y  +++ LC
Sbjct: 187 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLC 240

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +++AK +L QM D+   PD+ T+N++I   C  N   EA  L  ++  +GV P+V 
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G    A +L E M   G  P+   YNTL+D  C  G++ +A +L   M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI    +T+NTL  GL +  ++
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + AF+L ++M   G+  +   Y + +   CK G I +A ++  T+     E+D+ +Y  L
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A ++   +    +      YN ++ +L     +  A  LF +M   G 
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 540

Query: 372 APDCVAFNTLMLGCIR 387
            PD + +  +  G  R
Sbjct: 541 PPDALTYKIVFRGLCR 556



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 7/374 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY+ ++N LC+ G    A  +  +M++        C PD   + T+I  LC  
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 277

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +++A +L  Q+  K ++PDV T+N +I   C   D + A RLF EM + G  P+ VT+
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  A+E+F  M+ 
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 397

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P  +TYN++     +   +++
Sbjct: 398 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M  +G   D   Y T I+GLCK G    AL++ R +RI       ++Y+ ++ 
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +   ++ A  LF  +       D +TY I+   LC   G + +A D  L+M  KG  
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577

Query: 373 PDCVAFNTLMLGCI 386
           P+  +F  L  G +
Sbjct: 578 PEFSSFRMLAEGLL 591



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 212/397 (53%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++++++ A G +P+V+T++TL+  LCR      A+ + EEM       GV   PD   +T
Sbjct: 75  SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM----SSRGVA--PDETTFT 128

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +   VT N +I G+C      +A     + +  
Sbjct: 129 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 188

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ +T++  ++ LC+N  +  A +++++M+Q G  P+ F YN +++  C  G++  A
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ P V T+N L   
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 308

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++     A +LF+EM+  G   D   Y T ID LC  G + +AL+L + +    C   
Sbjct: 309 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D K+D A +L  
Sbjct: 369 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 428

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M ++G+ P+ + +N+++    +  +  K  ++L  M
Sbjct: 429 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 202/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K +    GC    +T + LING C+ G    AL   ++ I    E      PD +
Sbjct: 142 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE------PDQI 195

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ++GLC+   V  A +++  M  +  +PDV TYN V+   C      EAK +  +M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P++ TF+ ++  LC   ++EEA  L   +   GV P+ + +N L++  C  G  
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M++ GC  +  +Y+ LI+  C   ++  AL L  +M S G   + +TYNT+
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++FD+M   G++ +   + T IDGLCK+  I +A EL   +     
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 496 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + Y+ L+N L       +  +++ EM    G  G+  KPD V + T++  LC+
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCR 101

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M  + + PD  T+ ++++GF        A R+   M++ G     VT
Sbjct: 102 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 161

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT ++G C    V  A ++   M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  P + T+NTL   L   +++E
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   GV+ D + +   I+ LCK G    AL LF  ++   C  D  +Y+ LI
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L   +         +TYN +I  LC   ++++A ++F  M+ +G++
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + + FNTL+ G  ++ +     EL+++M
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQM 430



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V T++ LIN LC+ G   +AL LFEEM N        C PD V
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID LC  G + KA +LL  M+        +TYN++I G C      EA+ +F +M
Sbjct: 336 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N +TF+ ++D LCK+ K+++A +L+  MI  G++PN   YN+++  +C  G +
Sbjct: 396 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++PT   YN +
Sbjct: 456 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 516 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 575

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 576 FIPEFSSFRMLAEGLLNLG 594



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           FG+  + D V+Y  +++ L +   +   + +  +M  + I PDVVT+N++++  C A+  
Sbjct: 48  FGI--QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A  +  EM  +GV P+  TF+ +M    + G +E A ++   M+++G        N L
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  +Y+  +NG C+N  +  AL +   M+ +G 
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P V TYN +   L +  Q+E A  + ++M   G   D   + T I  LC    + EAL+
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R + +     D+ +++ LI+ LCK G   +A  LF  +       D VTYN +I  LC
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + GK+ KA DL  DME+ G     + +NT++ G  +     +  E+  +MD
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 2/289 (0%)

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL--ELMIQIGVRPNAFVYNTLM 172
           K L  EM  +G Q  +      +D        ++A  L+  +L    G++ +  VYN L+
Sbjct: 2   KVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLL 61

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +      ++   + ++  M + G K +V +++ L+   C+  ++  A+ +  EM S+G+ 
Sbjct: 62  NVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVA 121

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P   T+ TL  G  E   +E A ++   M   G +A        I+G CK G + +AL  
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            +       E D  +Y+  ++GLC++  +  A ++   + +     DV TYNI+++ LC 
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +G++++A  +   M  +G  PD   FNTL+      N   + ++L  ++
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N+ + LF      G + +   Y+ L+N   +  +++   S+YSEM ++GIKP VVT+NT
Sbjct: 41  LNQLQPLF------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L   HQV  A  + +EM   GVA D   + T + G  + G I  AL +   +  + 
Sbjct: 95  LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 154

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     + + LI+G CK GR++ A              D +TYN  ++ LC +  +  A 
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  +G  PD   +N ++    +N +  +   +L++M +R
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +AA +   + A G E +V+TY TLINGLC+ G T VAL +   M I G        +P  
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG-------MRPTP 509

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFI 119
             Y  ++  L +   +  A  L  +M +    PD +TY  V RG C       EA    +
Sbjct: 510 KAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFML 569

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           EM+D+G  P   +F ++ + L   G  +   + +E++++
Sbjct: 570 EMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 608



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF--RTLRILKCELDIRSYSCLIDG 314
           L  EM+R G         +F+D         +A++L   +   +   + D   Y+ L++ 
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           L +  ++K+   ++  +    +  DVVT+N ++ ALC   ++  A  +  +M ++GVAPD
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              F TLM G +        + +  RM E
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLE 152


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 209/397 (52%), Gaps = 7/397 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           ++KA G EPNV+TY+ LI   C+      A +L+E M+      GV+  PD V  + ++D
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS----GVL--PDVVTLSALVD 300

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLC++G   +A  L  +M    + P+ VTY ++I     A   +E+  L  EM+ +GV  
Sbjct: 301 GLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVM 360

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++V ++ +MD L K GK+EEA  +L       + PN   Y  L+D  C  G ++ A+++ 
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
           + ME      NV ++S +ING  K   +  A     +M   GI P VVTY TL  G F+ 
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
              E A  ++ +M   GV A+ +   + ++GL KNG I  A  LF+ +      LD  +Y
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + L+DGL K+G +  A+++   L    L  D V YN+ I+ LC  GK  +A     +M  
Sbjct: 541 TTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN 600

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G+ PD   +NT++    R  +TSK ++LL  M +RN
Sbjct: 601 TGLEPDQATYNTMIAARCREGKTSKALKLLKEM-KRN 636



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 205/396 (51%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY TLI+ L +      +L L  EM++     GVV   D V
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS----RGVVM--DLV 363

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT ++D L KEG +++AK++L   +  NI P+ VTY  ++   C A + + A+++ ++M
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V PNVVTFS I++ L K G + +A+  +  M   G+ PN   Y TL+DGF      
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +++  M   G + N F    L+NG  KN  IEGA +L+ +M  +G+    V Y TL
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  AFK+  E+    ++ D   Y  FI+ LC  G   EA    + +R    
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ +I   C+ G+   A +L   + R  +  +++TY  ++  L   G + KA  
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L  +M + G AP  +    ++  C  +     ++E+
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 196/402 (48%), Gaps = 4/402 (0%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  + +++   G   + +T ST + GLCRTG    A  L E ++ G G  G+    D V 
Sbjct: 134 APPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL----DVVG 189

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +IDG CK   +  A  ++ +M  + +  DVV YNS++ GF ++ D++ A  +   M 
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+PNVVT++ ++ E CK   M+EA  L E M++ GV P+    + L+DG C  G+ +
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M+ +G   N  +Y  LI+   K +    +L L  EM+S+G+   +V Y  L 
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  ++E A  +    Q   +  +   Y   +D  C+ G I  A ++   +      
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ ++S +I+GL K G L  A +    +    +  +VVTY  +I         + A D+
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + DM  +GV  +    ++L+ G  +N        L   MDER
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDER 531



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 35/435 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +AA    K+K  G  PNV+TY TLI+G  +      AL+++ +M+               
Sbjct: 450 KAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLV 509

Query: 47  -----NGN-----------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                NGN            E G++   D V YTT++DGL K G +  A ++  ++ +KN
Sbjct: 510 NGLRKNGNIEGAEALFKDMDERGLLL--DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           ++PD V YN  I   C     +EAK    EM + G++P+  T++ ++   C+ GK  +A 
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +LL+ M +  ++PN   Y TL+ G    G V +AK L   M S G      ++  ++   
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER-AFKLFDEMQRHGVAAD 269
             ++  +  L ++  M+  G+   +  YNTL + +   H + R A  + DEM   G+A D
Sbjct: 688 SGSRRPDVILEIHELMMGAGLHADITVYNTL-VHVLCCHGMARNATVVLDEMLTRGIAPD 746

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  +   I G CK+ ++  A  ++  +       +I +++ L+ GL  +GR+  A  +  
Sbjct: 747 TITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS 806

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L  + +TY+I++          +A  L+ +M +KG  P    +N+LM    +  
Sbjct: 807 DMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAG 866

Query: 390 ETSKVVELLHRMDER 404
             ++  EL   M  R
Sbjct: 867 MMNQAKELFSEMKRR 881



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 194/401 (48%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF  +   G   + + Y+TL++GL +TG+   A  + +E++  N        PDAV+
Sbjct: 521 AEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN------LSPDAVV 574

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   I+ LC  G   +AK  L +M++  + PD  TYN++I   C    +++A +L  EM 
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++PN++T++ ++  L + G +++A  LL  M   G  P +  +  ++     + R +
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E+   M   G   ++  Y+ L++  C +     A  +  EML++GI P  +T+N L 
Sbjct: 695 VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           +G  +   ++ AF ++ +M   G++ +   + T + GL   G I EA  +   ++ +  E
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y  L+ G  K      A  L+  +     I    TYN ++      G M++A +L
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F +M+ +GV      ++ L+ G  +     +V  LL  M E
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 164/365 (44%), Gaps = 41/365 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +   +++  G EP+  TY+T+I   CR G T  AL L +EM   +       KP+ +
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNS------IKPNLI 643

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP---------------------------- 93
            YTT++ GL + G V KAK LL +M      P                            
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703

Query: 94  -------DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                  D+  YN+++   C    +  A  +  EM+ +G+ P+ +TF+ ++   CK+  +
Sbjct: 704 MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A  +   M+  G+ PN   +NTL+ G    GR+  A  +   M+ +G + N  +Y IL
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + GY K      AL LY EM+SKG  P   TYN+L     +   + +A +LF EM+R GV
Sbjct: 824 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
              +  Y   ++G  K    +E   L + ++ L  +    + S +     + G    A  
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943

Query: 327 LFHSL 331
           L  +L
Sbjct: 944 LLKTL 948



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 37/350 (10%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +  D V+YN  +           A  +  EM  +GV  + VT S  +  LC+ G + EA+
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 151 QLLELMIQ-------------------------------------IGVRPNAFVYNTLMD 173
            L E++++                                      GV  +   YN+L+ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF  +G  + A E+   M++ G + NV +Y+ LI  YCK K ++ A SLY  M+  G+ P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVT + L  GL    Q   A+ LF EM + GVA +   Y T ID L K     E+L L 
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL 350

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+  Y+ L+D L K G+++ A ++        +  + VTY +++ A C  
Sbjct: 351 GEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA 410

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           G +D A  + L ME K V P+ V F++++ G ++     K  + + +M +
Sbjct: 411 GNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKD 460



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + + +K  G EPN +TY  L+ G  +  + + AL L+ EM++     G +  P A 
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK----GFI--PKAS 853

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++    K G +++AKEL  +MK + +     TY+ ++ G+    +  E + L  +M
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDM 913

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            + G +P+  T S +     + G   EA +LL+ + ++
Sbjct: 914 KELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++ + G  P   TY++L++   + G    A  LF EM       GV+    +
Sbjct: 834 VEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM----KRRGVLHT--S 887

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  +++G  K     + + LL  MK+    P   T +S+ R F     + EA+RL 
Sbjct: 888 STYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLL 945


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 203/376 (53%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ ITY+T +NGLC+  H   AL + + M+    +      PD   Y  +++ LC
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLC 332

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +++AK +L QM D+   PD+ T+N++I   C  N   EA  L  ++  +GV P+V 
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G    A +L E M   G  P+   YNTL+D  C  G++ +A +L   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI    +T+NTL  GL +  ++
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + AF+L ++M   G+  +   Y + +   CK G I +A ++  T+     E+D+ +Y  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A ++   +    +      YN ++ +L     +  A  LF +M   G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 372 APDCVAFNTLMLGCIR 387
            PD + +  +  G  R
Sbjct: 633 PPDALTYKIVFRGLCR 648



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 7/374 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY+ ++N LC+ G    A  +  +M++        C PD   + T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +++A +L  Q+  K ++PDV T+N +I   C   D + A RLF EM + G  P+ VT+
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  A+E+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P  +TYN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M  +G   D   Y T I+GLCK G    AL++ R +RI       ++Y+ ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +   ++ A  LF  +       D +TY I+   LC   G + +A D  L+M  KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 373 PDCVAFNTLMLGCI 386
           P+  +F  L  G +
Sbjct: 670 PEFSSFRMLAEGLL 683



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 212/397 (53%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++++++ A G +P+V+T++TL+  LCR      A+ + EEM       GV   PD   +T
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM----SSRGVA--PDETTFT 220

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +   VT N +I G+C      +A     + +  
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ +T++  ++ LC+N  +  A +++++M+Q G  P+ F YN +++  C  G++  A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ P V T+N L   
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++     A +LF+EM+  G   D   Y T ID LC  G + +AL+L + +    C   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D K+D A +L  
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELIN 520

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M ++G+ P+ + +N+++    +  +  K  ++L  M
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 202/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K +    GC    +T + LING C+ G    AL   ++ I    E      PD +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE------PDQI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ++GLC+   V  A +++  M  +  +PDV TYN V+   C      EAK +  +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P++ TF+ ++  LC   ++EEA  L   +   GV P+ + +N L++  C  G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M++ GC  +  +Y+ LI+  C   ++  AL L  +M S G   + +TYNT+
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++FD+M   G++ +   + T IDGLCK+  I +A EL   +     
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + Y+ L+N L       +  +++ EM    G  G+  KPD V + T++  LC+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCR 193

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M  + + PD  T+ ++++GF        A R+   M++ G     VT
Sbjct: 194 AHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT ++G C    V  A ++   M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  P + T+NTL   L   +++E
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   GV+ D + +   I+ LCK G    AL LF  ++   C  D  +Y+ LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L   +         +TYN +I  LC   ++++A ++F  M+ +G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + + FNTL+ G  ++ +     EL+++M
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQM 522



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V T++ LIN LC+ G   +AL LFEEM N        C PD V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID LC  G + KA +LL  M+        +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N +TF+ ++D LCK+ K+++A +L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++PT   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           FG+  + D V+Y  +++ L +   +   + +  +M  + I PDVVT+N++++  C A+  
Sbjct: 140 FGI--QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A  +  EM  +GV P+  TF+ +M    + G +E A ++   M+++G        N L
Sbjct: 198 RTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  +Y+  +NG C+N  +  AL +   M+ +G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P V TYN +   L +  Q+E A  + ++M   G   D   + T I  LC    + EAL+
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R + +     D+ +++ LI+ LCK G   +A  LF  +       D VTYN +I  LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + GK+ KA DL  DME+ G     + +NT++ G  +     +  E+  +MD
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P    Y  +IR        +  K L  EM  +G Q  +      +D        ++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 153 L--ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +  +L    G++ +  VYN L++      ++   + ++  M + G K +V +++ L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++  A+ +  EM S+G+ P   T+ TL  G  E   +E A ++   M   G +A  
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                 I+G CK G + +AL   +       E D  +Y+  ++GLC++  +  A ++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +     DV TYNI+++ LC +G++++A  +   M  +G  PD   FNTL+      N 
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 391 TSKVVELLHRM 401
             + ++L  ++
Sbjct: 372 LEEALDLARQV 382



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N+ + LF      G + +   Y+ L+N   +  +++   S+YSEM ++GIKP VVT+NT
Sbjct: 133 LNQLQPLF------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L   HQV  A  + +EM   GVA D   + T + G  + G I  AL +   +  + 
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     + + LI+G CK GR++ A              D +TYN  ++ LC +  +  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  +G  PD   +N ++    +N +  +   +L++M +R
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 3/201 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L+    +  + + AL + +  L++    P    Y  +   L  +  ++    L  EM+R 
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELF--RTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           G         +F+D         +A++L   +   +   + D   Y+ L++ L +  ++K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +   ++  +    +  DVVT+N ++ ALC   ++  A  +  +M ++GVAPD   F TLM
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 383 LGCIRNNETSKVVELLHRMDE 403
            G +        + +  RM E
Sbjct: 224 QGFVEEGSIEAALRVKARMLE 244


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 216/434 (49%), Gaps = 42/434 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F ++   G    +  Y++LING C+ G    A  L+ +MIN   E      P A  
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE------PTATT 465

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+I G CK+  V+KA +L  +M +K I P V T+ ++I G C  N+  EA +LF EM+
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P  VT++V+++  CK   M++A +LLE M+  G+ P+ + Y  L+ G C TGRV+
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK+    +     K N   YS L++GYC    +  ALS   EM+ +GI   +V +  L 
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID------------------------ 278
            G  +   ++R F L  +M   G+  D+  Y + ID                        
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 279 -----------GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                      GLCK G I  A  LF  +       +  +Y C +D L K G +K A +L
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            H + +G L+A+  TYNI+I   C  G++ +A  +  +M   G+ PDC+ ++T++    R
Sbjct: 766 HHEMLKG-LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824

Query: 388 NNETSKVVELLHRM 401
           + +    VEL   M
Sbjct: 825 SGDVGAAVELWDTM 838



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 206/401 (51%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   L+  G + +V+TY TL+ G CR       + L  EM+    E G V  P  
Sbjct: 270 LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMV----ELGFV--PTE 323

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + ++DGL K+G +D A +L++++      P++  YN++I   C   D ++A+ L+  
Sbjct: 324 AAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKN 383

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    +  N VT+S+++D  CK G ++ A      MI+ G+R   + YN+L++G C  G 
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+ L+  M + G +    +++ LI+GYCK+ ++E A  LY EM  K I P+V T+  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL   +++  A KLFDEM    +      Y   I+G CK   + +A EL   +    
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y  LI GLC +GR+  A +    L +  L  + + Y+ ++H  C  G++ +A 
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +M  +G+  D V    L+ G ++  +  ++  LL +M
Sbjct: 624 SASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKM 664



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%), Gaps = 16/412 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF ++     +P  +TY+ +I G C+  +   A  L E+M++     G+V  PD  
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN----GLV--PDTY 569

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC  G V  AK+ +  +  KN+  + + Y++++ G+C      EA     EM
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  ++V  +V++D   K   M+    LL+ M   G+RP++ +Y +++D +   G  
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            ++ E    M +  C  NV +Y+  +NG CK  EI+ A  L+ +ML+  I P  VTY   
Sbjct: 690 KKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   ++ A  L  EM + G+ A+T  Y   I G CK G ++EA ++   +     
Sbjct: 750 LDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGI 808

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS +I   C+SG +  A EL+ ++ R  +  D V +N++I+  C +G +DKA +
Sbjct: 809 FPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFE 868

Query: 362 LFLDMEAKGVAP---------DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  DM ++G+ P         D    N LM G     E    + L H M  R
Sbjct: 869 LRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTR 920



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 199/424 (46%), Gaps = 41/424 (9%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA---------------- 60
           P V T S ++NGL R    I+   +F+E +N     GV  KPD                 
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNA----GV--KPDPYTCSAVIRSLCELKDF 234

Query: 61  -------------------VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSV 101
                              V Y  +I GLCK G V +A E+   +++K +  DVVTY ++
Sbjct: 235 CRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           + GFC     ++   L  EM++ G  P     S ++D L K G ++ A  L+  + + G 
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            PN FVYN L++  C    +++A+ L+ +M SM    N  +YSILI+ +CK   ++ A S
Sbjct: 355 LPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES 414

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            +  M+  GI+ T+  YN+L  G  +   +  A  L+ +M   G+      + T I G C
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K+  + +A +L+R +   +    + +++ LI GLC +  +  A +LF  +    +    V
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TYN+MI   C    MDKA +L  DM   G+ PD   +  L+ G       S   + +  +
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594

Query: 402 DERN 405
            ++N
Sbjct: 595 HKKN 598



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 154/332 (46%), Gaps = 39/332 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC--------------------- 56
           N + YS L++G C  G    AL+   EMI       +VC                     
Sbjct: 602 NEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLL 661

Query: 57  --------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                   +PD+VIYT++ID   KEG   K+ E L  M  +   P+VVTY + + G C  
Sbjct: 662 KKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
            + + A  LF +M+   + PN VT+   +D L K G M+EA+ L   M++ G+  N   Y
Sbjct: 722 GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATY 780

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L+ GFC  GR+  A ++   M   G   +  +YS +I  +C++ ++  A+ L+  ML 
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLR 840

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA---------DTWAYRTFIDG 279
           KG++P  V +N L  G      +++AF+L ++M   G+           D       + G
Sbjct: 841 KGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHG 900

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            C  G +  AL L+ ++     +L +  + CL
Sbjct: 901 GCVTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 16/238 (6%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+TY+  +NGLC+ G    A +LFE+M+  N        P++V Y   +D L KEG
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN------ISPNSVTYGCFLDSLTKEG 757

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            + +A +L  +M  K +  +  TYN +IRGFC      EA ++  EM + G+ P+ +T+S
Sbjct: 758 NMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYS 816

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            I+ E C++G +  A +L + M++ GV P++  +N L+ G C+ G +++A EL   M S 
Sbjct: 817 TIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 195 GC---------KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           G          K ++   + L++G C   E++ AL LY  ML++ +K ++  +  L++
Sbjct: 877 GLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYL 934



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 35/319 (10%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + P V T S I++ L +  K     ++ +  +  GV+P+ +  + ++   C    
Sbjct: 174 MLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKD 233

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             RAKE  + MES     ++ +Y++LI+G CK   +  AL +   +  KG+K  VVTY T
Sbjct: 234 FCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCT 293

Query: 241 LFIGLFEIHQ-----------------------------------VERAFKLFDEMQRHG 265
           L +G   + Q                                   ++ A+ L  ++ R G
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              + + Y   I+ LCK   + +A  L++ +  +   L+  +YS LID  CK G L +A 
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
             F  +    +   +  YN +I+  C  G +  A  L+  M  +G+ P    F TL+ G 
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 386 IRNNETSKVVELLHRMDER 404
            ++ +  K  +L   M+E+
Sbjct: 474 CKDLQVEKAFKLYREMNEK 492



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 21/295 (7%)

Query: 109 NDSNEAKRLFIEM-MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           +DS  A R F  + + + +     +F++++  L +N     A+ LL  ++  G  P  FV
Sbjct: 74  HDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPK-FV 132

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +   ++                      CK  +   +  L++ Y +N  +  A+ +   M
Sbjct: 133 FEKFLES------------------HKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLM 174

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L   + P V T + +  GL  I +    +++FDE    GV  D +     I  LC+    
Sbjct: 175 LGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDF 234

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A E    +   + +L I +Y+ LI GLCK G +  A E+  SL    L  DVVTY  +
Sbjct: 235 CRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTL 294

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   C   + D    L  +M   G  P   A + L+ G  +        +L+ ++
Sbjct: 295 VLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKL 349



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 15/136 (11%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  + +++   G  P+ ITYST+I   CR+G    A+ L++ M+    E      PD+
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVE------PDS 847

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP---------DVVTYNSVIRGFCYANDS 111
           V +  +I G C  G +DKA EL   M  + + P         D+   N ++ G C   + 
Sbjct: 848 VAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEV 907

Query: 112 NEAKRLFIEMMDQGVQ 127
           + A RL+  M+ + V+
Sbjct: 908 DTALRLYHSMLTRAVK 923


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 214/430 (49%), Gaps = 29/430 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-ING--------NGE 51
           +EA  L  +++  GC P+VI+YST+ING C+ G     L L EEM I G        NG 
Sbjct: 270 VEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGV 329

Query: 52  FGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
             ++CK                    PD VIYTT+IDG CK G V  A  L  +M+ + I
Sbjct: 330 ILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI 389

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +PD +TY +VI G C      EA +LF EM+ + ++P+ VT++ ++D  CK GKM+EA  
Sbjct: 390 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   M+Q+G+ PN   Y  L DG C  G V+ A EL   M   G + N+++Y+ L+NG C
Sbjct: 450 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   I+ A+ L  +M   G  P  VTY TL     +  ++ RA +L  +M    +     
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +   ++G C +G + +  +L + +       +  +Y+ LI   C    ++   E++  +
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               ++ D  TYNI+I   C    M +A  L  DM  KG      ++N L+ G  +  + 
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689

Query: 392 SKVVELLHRM 401
            +  EL  +M
Sbjct: 690 LEARELFEQM 699



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 211/389 (54%), Gaps = 9/389 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  +F +    G   N  +Y+ + + LC+ G  + A  L  +M + G       C PD +
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG-------CIPDVI 289

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G C+ G + +  +L+ +M+ K + P+  TYN VI   C      EA+R+  EM
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ V ++ ++D  CK G +  A +L + M +  + P+   Y  ++ G C TGRV
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M     + +  +Y+ LI+GYCK  +++ A SL+++ML  G+ P +VTY  L
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V+ A +L  EM R G+  + + Y + ++GLCK G I +A++L + + +   
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ L+D  CKS  +  A EL   +    L   VVT+N++++  C  G ++    
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           L   M  KG+ P+   +N+L+   CIRNN
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNN 618



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 6/344 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  LF ++     EP+ +TY+ LI+G C+ G    A +L  +M+    + G+   P+ 
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNI 463

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT + DGLCK G VD A ELL +M  K +  ++ TYNS++ G C A + ++A +L  +
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ VT++ +MD  CK+ +M  A +LL  M+   ++P    +N LM+GFC++G 
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +   ++L   M   G   N  +Y+ LI  YC    +     +Y  M +KG+ P   TYN 
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ A+ L  +M   G      +Y   I G  K    +EA ELF  +R   
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              D   Y+   D     G++++  EL        L+ D+ T N
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 168/323 (52%), Gaps = 3/323 (0%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           ++L+   KD   +P V  ++   +    A   +EA++LF +M++ G+  +V + ++ +  
Sbjct: 169 EQLIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISH 226

Query: 140 LCKN-GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
           L ++   ++ A ++     ++GV  N   YN +    C  GRV  A +L + ME  GC  
Sbjct: 227 LSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIP 286

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V SYS +INGYC+  E++  L L  EM  KG+KP   TYN + + L +  +V  A ++ 
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM   G+A D   Y T IDG CK G +  A  LF  ++  K   D  +Y+ +I GLC++
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR+  A +LFH +    L  D VTY  +I   C +GKM +A  L   M   G+ P+ V +
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 379 NTLMLGCIRNNETSKVVELLHRM 401
             L  G  +  E     ELLH M
Sbjct: 467 TALADGLCKCGEVDTANELLHEM 489



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 6/239 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   ++  G  P+ +TY+TL++  C++   + A  L  +M++         +P  V
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE------LQPTVV 569

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++G C  G ++  ++LL  M +K I P+  TYNS+I+ +C  N+      ++  M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  T+++++   CK   M+EA  L   M+  G       YN L+ GF    + 
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A+ELF  M   G   +   Y+I  +      ++E  L L  E + K +   + T NT
Sbjct: 690 LEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 210/384 (54%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV T + ++N LC+ G          EM     E GV    D V Y T+++  C+ G V 
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEM----EEKGVYA--DLVTYNTLVNAYCRRGLVS 276

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L+  M  K + P + TYN++I G C       AKR+  EM+  G+ PN  TF+ ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
            E C+   + EA ++   M+Q GV P+   +++++  F   G + RA   F  M+ +G  
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +   Y+ILINGYC+N ++ GAL + +EM+ +G    VVTYNTL  GL     ++ A +L
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F EM   GV  D +   T I G CK+G + +AL LF T+ +   + D+ +Y+ L+DG CK
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G ++ A EL++ +    +    ++++I+I+  C+ G + +A  L+ +M+ KG+ P  V 
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
            NT++ G +R    SK  + L+ M
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTM 600



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 210/398 (52%), Gaps = 6/398 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
            ++++  G   +++TY+TL+N  CR G    A  L + M  G G      KP    Y  +
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMA-GKG-----LKPGLFTYNAL 300

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I+GLCKEG  ++AK +L +M    + P+  T+N ++   C   D  EA+R+F EM+ +GV
Sbjct: 301 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGV 360

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P++++FS I+    +NG++  A    E M  +G+ P+  +Y  L++G+C    V+ A +
Sbjct: 361 VPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALK 420

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +   M   GC  +V +Y+ L+NG C+ K ++ A  L+ EM+ +G+ P   T  TL  G  
Sbjct: 421 MRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYC 480

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +   + +A  LF+ M    +  D   Y T +DG CK G + +A EL+  +   +      
Sbjct: 481 KDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI 540

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           S+S LI+G C  G +  A+ L+  +    +   +VT N +I      G + KA+D    M
Sbjct: 541 SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++GV PDC+ +NTL+   ++     +   L++ M+ER
Sbjct: 601 ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   G  P++I++S+++    R G    AL  FE+M       GV   PD V
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK------GVGLVPDTV 400

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I+G C+   V  A ++  +M ++    DVVTYN+++ G C     ++A  LF EM
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV P+  T + ++   CK+G M +A  L E M    ++P+   YNTLMDGFC  G +
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AKEL+  M S     +  S+SILING+C    +  A  L+ EM  KGIKPT+VT NT+
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      + +A    + M   GV  D   Y T I+   K      A  L   +     
Sbjct: 581 IKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ ++ G  + GR++ A  + H +    +  D  TY  +I+   +   M +A  
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFR 700

Query: 362 LFLDMEAKGVAPD 374
           +  +M  +G  PD
Sbjct: 701 VHDEMLQRGFVPD 713



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 214/434 (49%), Gaps = 33/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  L   +   G +P + TY+ LINGLC+ G    A  + +EM+               
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 47  ----------------NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                           N   + GVV  PD + +++I+    + G + +A     +MK   
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVV--PDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD V Y  +I G+C  +D + A ++  EM+++G   +VVT++ +++ LC+   +++A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L + M++ GV P+ +   TL+ G+C  G + +A  LF +M     K +V +Y+ L++G+
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  E+E A  L+ +M+S+ I P+ ++++ L  G   +  V  AF+L+DEM+  G+    
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
               T I G  + G + +A +   T+       D  +Y+ LI+   K      A+ L ++
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINN 634

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L+ ++VTYN ++      G+M +A  +   M  KG+ PD   + +L+ G +  + 
Sbjct: 635 MEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDN 694

Query: 391 TSKVVELLHRMDER 404
             +   +   M +R
Sbjct: 695 MKEAFRVHDEMLQR 708



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 35/326 (10%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A +++ + +  G   NV T +++++ LCK+GK++     L  M + GV  +   YNTL++
Sbjct: 208 AWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            +C  G V+ A  L   M   G K  +F+Y+ LING CK    E A  +  EML  G+ P
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327

Query: 234 TVVTYNTLF----------------------------------IGLFEIH-QVERAFKLF 258
              T+N +                                   +G+F  + ++ RA   F
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           ++M+  G+  DT  Y   I+G C+N  +  AL++   +    C +D+ +Y+ L++GLC+ 
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             L  A ELF  +    +  D  T   +IH  C DG M KA  LF  M  + + PD V +
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           NTLM G  +  E  K  EL + M  R
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISR 533



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 177/407 (43%), Gaps = 63/407 (15%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN--------------------INPDVVT 97
           P+  I  T+I  L +   + +A+ LLL++  K+                     N +VV 
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           ++ +IR +  A    E    F  +  +G   ++   + ++  + K G ++ A ++ E  +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G   N +  N +++  C  G+++        ME  G   ++ +Y+ L+N YC+   + 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF---------------------- 255
            A  L   M  KG+KP + TYN L  GL +    ERA                       
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 256 -------------KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                        ++F+EM + GV  D  ++ + +    +NG +  AL  F  ++ +   
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 303 LDIRSYSCLIDGLCK----SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            D   Y+ LI+G C+    SG LK+  E+     RG  + DVVTYN +++ LC    +D 
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVE---RGC-VMDVVTYNTLLNGLCRGKMLDD 452

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A +LF +M  +GV PD     TL+ G  ++   +K + L   M  R+
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 230/430 (53%), Gaps = 33/430 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+   GC PN  ++  L+ G CR G ++ AL    E+++G G FGV  +P+ V
Sbjct: 169 DAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRAL----ELLDGMGSFGV--QPNKV 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY T+I   C+EG  ++A+ L+ +M++  + PDVVT+NS I   C A    EA R+F +M
Sbjct: 223 IYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM 282

Query: 122 -MDQGV---QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            +D+ +   +PN+ TF+++++  CK G +EEA  L+E M + G       YN  + G   
Sbjct: 283 QIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVR 342

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++  A+     M   G + N++S++ +++G CKN  I  A  +   M+S GI P  VT
Sbjct: 343 NGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+TL  G     +V +A  +  EM R G + +T+     +  L K G I EA +L + + 
Sbjct: 403 YSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMN 462

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFH------SLPRGVL--------------- 336
               +LD  + + +IDGLCKSG+L  A E+        S   G L               
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522

Query: 337 --IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
             + D++TY+I+I+ LC  G++D+A   F++M  K + PD + ++T +    ++ + S  
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSA 582

Query: 395 VELLHRMDER 404
             +L  M++R
Sbjct: 583 FRVLKDMEKR 592



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 209/431 (48%), Gaps = 33/431 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A  L   + +FG +PN + Y+TLI+  CR G    A  L E M   +G F     PD 
Sbjct: 203 MRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM-REDGLF-----PDV 256

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMK-DKNIN---PDVVTYNSVIRGFCYANDSNEAKR 116
           V + + I  LC  G + +A  +   M+ D+ +    P++ T+N ++ GFC      EAK 
Sbjct: 257 VTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKT 316

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M   G    + ++++ +  L +NGK+ EA   L+ M+  G+ PN + +NT+MDG C
Sbjct: 317 LVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLC 376

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G ++ A+ +   M S G   +  +YS L++G C   ++  A ++  EM+ +G  P   
Sbjct: 377 KNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTY 436

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T N L   L++  ++  A KL  +M       D       IDGLCK+G + EA+E+   +
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496

Query: 297 RI-----------------------LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            I                        KC  D+ +YS +I+GLCK+GRL  A + F  +  
Sbjct: 497 WIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVG 556

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             L  D + Y+  IH+ C  GK+  A  +  DME +G       +N+L+LG    N+  +
Sbjct: 557 KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFE 616

Query: 394 VVELLHRMDER 404
           +  LL  M E+
Sbjct: 617 IYGLLDDMKEK 627



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 196/414 (47%), Gaps = 36/414 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+ +TYSTL++G C TG  + A N+  EM+         C P+      ++  L KE
Sbjct: 395 GIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG------CSPNTYTCNILLHSLWKE 448

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---------------- 117
           G + +A++LL +M +++ + D VT N VI G C +   +EA  +                
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLG 508

Query: 118 --FIEMMDQGVQ-----PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             FI ++D         P+++T+S+I++ LCK G+++EA +    M+   + P++ +Y+T
Sbjct: 509 NSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDT 568

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            +  FC  G+++ A  +   ME  GC  ++ +Y+ LI G     +I     L  +M  KG
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN---GYIV 287
           I P + TYN +   L E  +++ A  L DEM + G++ +  ++R  I   CK    G + 
Sbjct: 629 ITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVK 688

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           E  E+  ++    C      YS + + L   G +  A ELF +            YN +I
Sbjct: 689 EVFEIALSI----CGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLI 744

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             LC D  ++ A D+   M  KG   D  +F  ++ G  +  +     EL  RM
Sbjct: 745 EKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 198/395 (50%), Gaps = 10/395 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTIIDGLCKEG 74
           E + ++   LI  L ++G + +A + F+          V   P  V +Y  +++   +E 
Sbjct: 76  EVSHVSLIALIRILAKSGLSDLAFSQFQSF-----RSQVPANPPPVYLYNMVLESSLRED 130

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD    L   M    ++P+  T N +I G C +    +A+ +F +M  +G +PN  +F 
Sbjct: 131 KVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFG 190

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++   C+ G    A +LL+ M   GV+PN  +YNTL+  FC  GR   A+ L   M   
Sbjct: 191 ILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRED 250

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGI-KPTVVTYNTLFIGLFEIHQ 250
           G   +V +++  I+  C   +I  A  ++ +M      G+ +P + T+N +  G  +   
Sbjct: 251 GLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGM 310

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E A  L + M+R+G   +  +Y  ++ GL +NG ++EA    + +     E +I S++ 
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           ++DGLCK+G +  A  +   +    +  D VTY+ ++H  C+ GK+ KA+++  +M  +G
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +P+    N L+    +     +  +LL +M+ER+
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERS 465



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 24/346 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVV----- 55
           EA  L  K+     + + +T + +I+GLC++G    A+ + E M I+G+   G +     
Sbjct: 453 EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 56  -----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                      C PD + Y+ II+GLCK G +D+A++  ++M  K+++PD + Y++ I  
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           FC     + A R+  +M  +G   ++ T++ ++  L    ++ E   LL+ M + G+ PN
Sbjct: 573 FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN ++   C  GR+  A  L   M   G   N+ S+ +LI  +CK  +      ++ 
Sbjct: 633 ICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692

Query: 225 EMLSK-GIKPTVVT--YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
             LS  G K  + +  +N L IG     +V  A +LFD           + Y   I+ LC
Sbjct: 693 IALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDLIEKLC 748

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           K+  +  A ++   +       D  S+  +IDGL K G+   A EL
Sbjct: 749 KDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADEL 794



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 40/229 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  GC  ++ TY++LI GL           L ++M     E G+   P+   
Sbjct: 582 AFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDM----KEKGIT--PNICT 635

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND------------ 110
           Y  +I  LC+ G +  A  LL +M  K I+P++ ++  +I+ FC A+D            
Sbjct: 636 YNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIAL 695

Query: 111 ----------------------SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
                                  +EAK LF   +D+        ++ ++++LCK+  +E 
Sbjct: 696 SICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLEN 755

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           AS +L  MI  G R +   +  ++DG    G+ + A EL   M  M  +
Sbjct: 756 ASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 223/412 (54%), Gaps = 38/412 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++  K+  +GC PNV+T++TL+ G C     + AL +++EM+     F      D V+
Sbjct: 108 AFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRF------DDVL 161

Query: 63  YTTIIDGLCKE--GFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           Y T+I+GLCK   G    A +LL +M+++  + P+++ YN+V+ G C   + NEA+ L  
Sbjct: 162 YGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCS 221

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ QG+ P++ T+S ++  LC+ G+ +E + LL                   +GFCL  
Sbjct: 222 KMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLL-------------------NGFCLNN 262

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+ A+ELF  M   G +H++ +Y+IL+NGYC N ++  A  L+  M+ +G +P  +TY 
Sbjct: 263 KVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYT 322

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G   I +V+ A  LF  M   G+  D W+Y   I G CK   + EA+ L   + + 
Sbjct: 323 ILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLK 382

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----PRGVLIADVVTYNIMIHALCADG 354
               +I +Y+ ++DGLCKSG +  AW+L   +     P      DV TYNI++ +LC   
Sbjct: 383 NLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP----PDVTTYNILLESLCRIE 438

Query: 355 KMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            ++KA   F  +   +  AP+  ++N L+ GC +N    + + L + M  +N
Sbjct: 439 CVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 170/320 (53%), Gaps = 10/320 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  +   G + ++I Y+ L+NG C       A  LF  M+   GE     +PD +
Sbjct: 266 EARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVE-RGE-----QPDTI 319

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++ G C    VD+A+ L   M ++ + PDV +YN +I+G+C      EA  L  +M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + + PN++T++ ++D LCK+G + +A +L+ E+       P+   YN L++  C    
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439

Query: 181 VNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           V +A   F  +        NV+SY+ILI+G CKN+ ++ A++L++ M  K + P +VTYN
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   LF   Q+++A  L  ++   G++ +   Y   I+GL K G    A ++   L I 
Sbjct: 500 ILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIR 559

Query: 300 KCELDIRSYSCLIDGLCKSG 319
               D+++Y  +I+ LCK G
Sbjct: 560 GYHPDVKTY--IINELCKGG 577



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 19/318 (5%)

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C  +  ++A  LF  M+D    P++V F+ I+  + K      A  L  LM   GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             +N L++ FC  G+++ A  +   +   GC+ NV +++ L+ G+C N ++  AL +Y E
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 226 MLSKGIKPTVVTYNTLFIGL--FEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCK 282
           M+++ I+   V Y TL  GL   +I +   A +L  +M +R  V  +   Y T + GLCK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK----------------IAWE 326
           +G I EA  L   + +     DI +YS LI GLC++G+ K                 A E
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF+ +       D++ YNI+++  C + K+ +A  LF  M  +G  PD + +  LM G  
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 387 RNNETSKVVELLHRMDER 404
             ++  +   L H M ER
Sbjct: 330 LIDKVDEARNLFHGMIER 347


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 215/398 (54%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +++  G  P+V+TY++LI+G  + G      +LF EM +      V C PD + Y  
Sbjct: 252 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCVPDIITYNG 305

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+  CK   + +A E   +MK+  + P+VVTY+++I  FC       A +L  +M   G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++D  CK G + EA +LL  M+Q GV+ N   Y  L+DG C  GR+  A+
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM   G   N   Y+ L++GY K + +E A+ +  +M    IKP ++ Y ++  G 
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++E    + +EM+  G++A+     T ID   K G   +AL  F+ ++ +  E  I
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 545

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  LIDGLC++G +++A + F  +    L  +V  Y  +I  LC +  ++ A  LF +
Sbjct: 546 VTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDE 605

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+ +G+ PD  AF  L+ G +++    + + L+ RM E
Sbjct: 606 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 204/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E A+LF ++K  GC P++ITY+ LIN  C+      A   F EM N NG      KP+ V
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID  CKEG +  A +LL  M+   + P+  TY S+I   C A +  EA +L  +M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+ N+VT++ ++D LCK G+M EA ++   M++ G+ PN  VY  L+ G+    R+
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M     K ++  Y  +I G+C  +++E    +  EM S+GI    V   T+
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+  +   A   F EMQ  GV A    Y   IDGLC+ G +  A++ F  +  L  
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LIDGLC +  ++ A +LF  +    +  D+  +  +I      G + +A  
Sbjct: 577 QPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 636

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M    +  D   + +L+ G  +  E  +  +  + M E+
Sbjct: 637 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 679



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 185/350 (52%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C   + ++  +     + G +++A E   +M++    P   + N ++     + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           ++ F +M+  G+ P+V T++V++D LCK G +E + +L   M ++G+ P+   YN+L+DG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G +     LF  M+ +GC  ++ +Y+ LIN YCK +++  A   +SEM + G+KP 
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+TL     +   ++ A KL  +M+R G+  + + Y + ID  CK G + EA +L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I +Y+ L+DGLCK+GR+  A E+F S+ +  +  +   Y  ++H      
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M+ A  +   M    + PD + + +++ G     +  +   +L  M  R
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 504



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++  G  PN  TY++LI+  C+ G+   A  L  +M+      GV  K + V 
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVT 407

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT ++DGLCK G + +A+E+   M    I+P+   Y +++ G+  A    +A ++  +M 
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++P+++ +  I+   C   K+EE   +LE M   G+  N  +  T++D +   G+ +
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A   F  M+ +G +  + +Y +LI+G C+   +E A+  +  MLS G++P V  Y +L 
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL   + +E A KLFDEMQ  G+  D  A+   IDG  K+G + EAL L   +  L  E
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+  Y+ L+ G  + G L  A + F+ +    ++ + V    ++      G++D+A +L
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707

Query: 363 FLDME 367
             +ME
Sbjct: 708 KNEME 712



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 152/293 (51%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA   F  M +    P   + + ++  L K+G  +   +    MI  G+ P+ F YN ++
Sbjct: 178 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMI 237

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D  C  G +  ++ LFV M  MG   +V +Y+ LI+GY K   +E   SL++EM   G  
Sbjct: 238 DYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 297

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P ++TYN L     +  ++ RAF+ F EM+ +G+  +   Y T ID  CK G +  A++L
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 357

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +R      +  +Y+ LID  CK+G L  AW+L + + +  +  ++VTY  ++  LC 
Sbjct: 358 LXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G+M +A ++F  M   G++P+   +  L+ G I+       +++L +M E N
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 76/332 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G + N++TY+ L++GLC+ G  I A  +F  M+           P+  
Sbjct: 388 EAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG------ISPNQQ 441

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY-------------- 107
           +YT ++ G  K   ++ A ++L QM + NI PD++ Y S+I G C               
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 108 ---------------------ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                A  S++A   F EM D GV+  +VT+ V++D LC+ G +
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A      M+ +G++PN  VY +L+DG C    +  AK+LF  M+  G   ++ +++ L
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 207 INGYCKNKEIEGALSL-----------------------------------YSEMLSKGI 231
           I+G  K+  ++ AL L                                   ++EM+ KGI
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            P  V    L    ++  Q++ A +L +EM+R
Sbjct: 682 LPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F +++  G E  ++TY  LI+GLC  G   +A++ F  M++      +  +P+  
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS------LGLQPNVA 581

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++IDGLC    ++ AK+L  +M+ + + PD+  + ++I G     +  EA  L   M
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  ++ ++  ++ ++    + G++ +A +    MI+ G+ P   +   L+  +   G++
Sbjct: 642 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701

Query: 182 NRAKELFVSMESMG 195
           + A EL   ME M 
Sbjct: 702 DEAIELKNEMERMA 715


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 207/384 (53%), Gaps = 7/384 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++   G   N++  ++L+ G C  G+   ALNLF + I  +G F     P+ 
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK-ITEDGLF-----PNK 400

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I+G C  G ++KA EL  QMK   I P V   NS++RG+  A    EA +LF E
Sbjct: 401 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 460

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +D GV  N+ T++++M  LCK GKM+EA  LL+ M+  G+ PN   YN ++ G C  G 
Sbjct: 461 AVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 519

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M +   K NV +YSILI+G  K  + E AL L+ +MLS  I PT  T+NT
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 579

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL ++ Q+  A          G       Y + +DG  K G I  AL ++R +    
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +Y+ LI+G CKS R+ +A +    +    L  DV  Y+ +I   C    M+ A 
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 699

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
           DLF ++   G++P+ + +N+++ G
Sbjct: 700 DLFFELLEVGLSPNRIVYNSMISG 723



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 211/390 (54%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   +   G  PNV++Y+ +I G CR G+  +A ++F +M+  +       KP+ V
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD------LKPNVV 540

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K+G  +KA +L  QM   NI P   T+N++I G C     +EA+      
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+ +T++ I+D   K G ++ A  +   M + GV PN   Y +L++GFC + R+
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +    M   G + +V +YS LI+G+CK +++E A  L+ E+L  G+ P  + YN++
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +++ +E A   + +M    +  D   Y T IDGL K G +V A +L+  +     
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI ++  L++GLC  G+L+ A ++   + R  +   V+ YN +I     +G + +A  
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           L  +M  +G+ PD V ++ L+ G  + + +
Sbjct: 841 LHDEMLDRGLVPDDVTYDILINGKFKGDRS 870



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 215/403 (53%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF +    G   N+ TY+ +++ LC+ G    A +L + M+N     G+V  P+ V
Sbjct: 453 EASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ----GMV--PNVV 505

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C++G +D A  +   M  +++ P+VVTY+ +I G     DS +A  LF +M
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P   TF+ I++ LCK G+M EA   L+  ++ G  P+   YN+++DGF   G +
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  ++  M   G   NV +Y+ LING+CK+  I+ AL    EM  KG++  V  Y+ L
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 685

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E A  LF E+   G++ +   Y + I G      +  AL  ++ +   + 
Sbjct: 686 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 745

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LIDGL K GRL  A +L+  +    ++ D++T++++++ LC  G+++ A  
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 805

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +M+ K + P  + +NTL+ G  R     +   L   M +R
Sbjct: 806 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 165/327 (50%), Gaps = 1/327 (0%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           KEG V++A+E   + K++ +  D   Y+ +I+  C   +SN    L  EM ++G  P+  
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+ ++      G M EA +L E MI  G   N  V  +LM G+C  G ++ A  LF  +
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   N  +YS+LI G C +  IE A  LY++M   GI P+V   N+L  G  +    
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A KLFDE    GV A+ + Y   +  LCK G + EA  L   +       ++ SY+ +
Sbjct: 452 EEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I G C+ G + +A  +F  +    L  +VVTY+I+I      G  +KA DLF  M +  +
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELL 398
           AP    FNT++ G  +  + S+  + L
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKL 597



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 137/348 (39%), Gaps = 61/348 (17%)

Query: 96  VTYNSVIRGF-CYANDSNEAKRLFIEMMDQ-----GVQPNVVTFSVIMDELCKNGKMEEA 149
           ++ N VI    C+ ND   A R F     Q     GV    V   ++M     +G    A
Sbjct: 98  LSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHG---HA 154

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            +LL   +     P+  V+        +   +N AK     ++     H VF+Y  L+N 
Sbjct: 155 RKLLNRYVSGDSDPSPVVF--------VDHLINCAKRFDFELD-----HRVFNY--LLNA 199

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           Y +   IE A+  ++ M+ + + P V   N L   L   + +     L+++M   G+  D
Sbjct: 200 YIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGD 259

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            +     +    K G + EA E FR  +    +LD  +YS +I  +CK     +  EL  
Sbjct: 260 HFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLE 319

Query: 330 SLP-RG----------VLIADVVTYNIMIHAL-------------------------CAD 353
            +  RG          V++A V   N M+ AL                         CA 
Sbjct: 320 EMKERGWVPSEATFTSVIVACVAQGN-MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 378

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G +D A +LF  +   G+ P+ V ++ L+ GC  +    K  EL  +M
Sbjct: 379 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 207/384 (53%), Gaps = 7/384 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++   G   N++  ++L+ G C  G+   ALNLF + I  +G F     P+ 
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK-ITEDGLF-----PNK 360

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I+G C  G ++KA EL  QMK   I P V   NS++RG+  A    EA +LF E
Sbjct: 361 VTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE 420

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +D GV  N+ T++++M  LCK GKM+EA  LL+ M+  G+ PN   YN ++ G C  G 
Sbjct: 421 AVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 479

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M +   K NV +YSILI+G  K  + E AL L+ +MLS  I PT  T+NT
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNT 539

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL ++ Q+  A          G       Y + +DG  K G I  AL ++R +    
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +Y+ LI+G CKS R+ +A +    +    L  DV  Y+ +I   C    M+ A 
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 659

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
           DLF ++   G++P+ + +N+++ G
Sbjct: 660 DLFFELLEVGLSPNRIVYNSMISG 683



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 211/390 (54%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   +   G  PNV++Y+ +I G CR G+  +A ++F +M+  +       KP+ V
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD------LKPNVV 500

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K+G  +KA +L  QM   NI P   T+N++I G C     +EA+      
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+ +T++ I+D   K G ++ A  +   M + GV PN   Y +L++GFC + R+
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +    M   G + +V +YS LI+G+CK +++E A  L+ E+L  G+ P  + YN++
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +++ +E A   + +M    +  D   Y T IDGL K G +V A +L+  +     
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI ++  L++GLC  G+L+ A ++   + R  +   V+ YN +I     +G + +A  
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           L  +M  +G+ PD V ++ L+ G  + + +
Sbjct: 801 LHDEMLDRGLVPDDVTYDILINGKFKGDRS 830



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 215/403 (53%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF +    G   N+ TY+ +++ LC+ G    A +L + M+N     G+V  P+ V
Sbjct: 413 EASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ----GMV--PNVV 465

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C++G +D A  +   M  +++ P+VVTY+ +I G     DS +A  LF +M
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P   TF+ I++ LCK G+M EA   L+  ++ G  P+   YN+++DGF   G +
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  ++  M   G   NV +Y+ LING+CK+  I+ AL    EM  KG++  V  Y+ L
Sbjct: 586 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 645

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E A  LF E+   G++ +   Y + I G      +  AL  ++ +   + 
Sbjct: 646 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 705

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LIDGL K GRL  A +L+  +    ++ D++T++++++ LC  G+++ A  
Sbjct: 706 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 765

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +M+ K + P  + +NTL+ G  R     +   L   M +R
Sbjct: 766 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 165/327 (50%), Gaps = 1/327 (0%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           KEG V++A+E   + K++ +  D   Y+ +I+  C   +SN    L  EM ++G  P+  
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+ ++      G M EA +L E MI  G   N  V  +LM G+C  G ++ A  LF  +
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   N  +YS+LI G C +  IE A  LY++M   GI P+V   N+L  G  +    
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A KLFDE    GV A+ + Y   +  LCK G + EA  L   +       ++ SY+ +
Sbjct: 412 EEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I G C+ G + +A  +F  +    L  +VVTY+I+I      G  +KA DLF  M +  +
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELL 398
           AP    FNT++ G  +  + S+  + L
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKL 557



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 137/348 (39%), Gaps = 61/348 (17%)

Query: 96  VTYNSVIRGF-CYANDSNEAKRLFIEMMDQ-----GVQPNVVTFSVIMDELCKNGKMEEA 149
           ++ N VI    C+ ND   A R F     Q     GV    V   ++M     +G    A
Sbjct: 58  LSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHG---HA 114

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            +LL   +     P+  V+        +   +N AK     ++     H VF+Y  L+N 
Sbjct: 115 RKLLNRYVSGDSDPSPVVF--------VDHLINCAKRFDFELD-----HRVFNY--LLNA 159

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           Y +   IE A+  ++ M+ + + P V   N L   L   + +     L+++M   G+  D
Sbjct: 160 YIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGD 219

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            +     +    K G + EA E FR  +    +LD  +YS +I  +CK     +  EL  
Sbjct: 220 HFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLE 279

Query: 330 SLP-RG----------VLIADVVTYNIMIHAL-------------------------CAD 353
            +  RG          V++A V   N M+ AL                         CA 
Sbjct: 280 EMKERGWVPSEATFTSVIVACVAQGN-MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 338

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G +D A +LF  +   G+ P+ V ++ L+ GC  +    K  EL  +M
Sbjct: 339 GNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 202/376 (53%), Gaps = 6/376 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ ITY+T +NGLC+  H   AL + + M+    +      PD   Y  +++ LC
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLC 332

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +++AK +L QM D+   PD+ T+N++I   C  N   EA  L  ++  +GV P+V 
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G    A +L E M   G  P+   YNTL+D  C  G++ +A +L   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI    +T+NTL  GL +  ++
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + AF L ++M   G+  +   Y + +   CK G I +A ++  T+     E+D+ +Y  L
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A ++   +    +      YN ++ +L     +  A  LF +M   G 
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632

Query: 372 APDCVAFNTLMLGCIR 387
            PD + +  +  G  R
Sbjct: 633 PPDALTYKIVFRGLCR 648



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 7/374 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY+ ++N LC+ G    A  +  +M++        C PD   + T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +++A +L  Q+  K ++PDV T+N +I   C   D + A RLF EM + G  P+ VT+
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  A+E+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P  +TYN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M  +G   D   Y T I+GLCK G    AL++ R +RI       ++Y+ ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC-ADGKMDKAHDLFLDMEAKGVA 372
            L +   ++ A  LF  +       D +TY I+   LC   G + +A D  L+M  KG  
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669

Query: 373 PDCVAFNTLMLGCI 386
           P+  +F  L  G +
Sbjct: 670 PEFSSFRMLAEGLL 683



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 211/397 (53%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ++++++ A G +P+V+T++TL+  LCR      A+ + EEM       GV   PD   +T
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM----SSRGVA--PDETTFT 220

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +   VT N +I G+C      +A     + +  
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ +T++  ++ LC+N  +  A +++++M+Q G  P+ F YN +++  C  G++  A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ P V T+N L   
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++     A +LF+EM+  G   D   Y T ID LC  G + +AL+L + +    C   
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D K+D A  L  
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLIN 520

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M ++G+ P+ + +N+++    +  +  K  ++L  M
Sbjct: 521 QMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 201/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K +    GC    +T + LING C+ G    AL   ++ I    E      PD +
Sbjct: 234 AALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE------PDQI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T ++GLC+   V  A +++  M  +  +PDV TYN V+   C      EAK +  +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P++ TF+ ++  LC   ++EEA  L   +   GV P+ + +N L++  C  G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  M++ GC  +  +Y+ LI+  C   ++  AL L  +M S G   + +TYNT+
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A ++FD+M   G++ +   + T IDGLCK+  I +A  L   +     
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 203/389 (52%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + Y+ L+N L       +  +++ EM    G  G+  KPD V + T++  LC+
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALCR 193

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M  + + PD  T+ ++++GF        A R+   M++ G     VT
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT ++G C    V  A ++   M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  P + T+NTL   L   +++E
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  ++   GV+ D + +   I+ LCK G    AL LF  ++   C  D  +Y+ LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L   +         +TYN +I  LC   ++++A ++F  M+ +G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + + FNTL+ G  ++ +      L+++M
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQM 522



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 166/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V T++ LIN LC+ G   +AL LFEEM N        C PD V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID LC  G + KA +LL  M+        +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N +TF+ ++D LCK+ K+++A  L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++PT   YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           FG+  + D V+Y  +++ L +   +   + +  +M  + I PDVVT+N++++  C A+  
Sbjct: 140 FGI--QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 197

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A  +  EM  +GV P+  TF+ +M    + G +E A ++   M+++G        N L
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  +Y+  +NG C+N  +  AL +   M+ +G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P V TYN +   L +  Q+E A  + ++M   G   D   + T I  LC    + EAL+
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R + +     D+ +++ LI+ LCK G   +A  LF  +       D VTYN +I  LC
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + GK+ KA DL  DME+ G     + +NT++ G  +     +  E+  +MD
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 2/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P    Y  +IR        +  K L  EM  +G Q  +      +D        ++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 153 L--ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +  +L    G++ +  VYN L++      ++   + ++  M + G K +V +++ L+   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++  A+ +  EM S+G+ P   T+ TL  G  E   +E A ++   M   G +A  
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                 I+G CK G + +AL   +       E D  +Y+  ++GLC++  +  A ++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +     DV TYNI+++ LC +G++++A  +   M  +G  PD   FNTL+      N 
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 391 TSKVVELLHRM 401
             + ++L  ++
Sbjct: 372 LEEALDLARQV 382



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N+ + LF      G + +   Y+ L+N   +  +++   S+YSEM ++GIKP VVT+NT
Sbjct: 133 LNQLQPLF------GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L   HQV  A  + +EM   GVA D   + T + G  + G I  AL +   +  + 
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     + + LI+G CK GR++ A              D +TYN  ++ LC +  +  A 
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  +G  PD   +N ++    +N +  +   +L++M +R
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 3/201 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L+    +  + + AL + +  L++    P    Y  +   L  +  ++    L  EM+R 
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELF--RTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           G         +F+D         +A++L   +   +   + D   Y+ L++ L +  ++K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +   ++  +    +  DVVT+N ++ ALC   ++  A  +  +M ++GVAPD   F TLM
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 383 LGCIRNNETSKVVELLHRMDE 403
            G +        + +  RM E
Sbjct: 224 QGFVEEGSIEAALRVKARMLE 244


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/365 (34%), Positives = 202/365 (55%), Gaps = 9/365 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+IT++T+INGLC+ G     LN   ++++    +G    P+ V Y T+IDG CK G V
Sbjct: 228 PNLITFNTVINGLCKVGK----LNKAGDVVDDMKVWGFW--PNVVTYNTLIDGYCKMGRV 281

Query: 77  DK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            K   A  +L +M +  ++P+ VT+N +I GFC   + + A ++F EM  QG++P VVT+
Sbjct: 282 GKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTY 341

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++ LC  GK+ EA  LL+ M+   ++PN   YN L++G+C    +  A+ELF ++  
Sbjct: 342 NSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGK 401

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   NV +++ L++GYCK  ++E A  L   ML KG  P   TYN L +G     ++E 
Sbjct: 402 QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE 461

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              L +EMQ  GV ADT  Y   I   C+     +A  L   +     +    +Y+ L++
Sbjct: 462 VKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G L+ A  L   + +    A+VVTYN++I   C  GK++ A+ L  +M  KG+ P
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP 581

Query: 374 DCVAF 378
           +   +
Sbjct: 582 NRTTY 586



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 6/288 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++      PN +T++ LI+G C+  +   AL +FEEM +         KP  V
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG------LKPTVV 339

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++++GLC EG +++AK LL +M   N+ P+V+TYN++I G+C      EA+ LF  +
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PNV+TF+ ++   CK GKMEEA  L ++M++ G  PNA  YN L+ GFC  G++
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K L   M+  G K +  +Y+ILI+ +C+ KE + A  L  EML KG+KP+ +TYN L
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNIL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             G      +  A  L  +M++ G  A+   Y   I G C+ G + +A
Sbjct: 520 LNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 184/350 (52%), Gaps = 3/350 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC---YANDSNEA 114
           P+ + + T+I+GLCK G ++KA +++  MK     P+VVTYN++I G+C         +A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             +  EM++  V PN VTF+V++D  CK+  +  A ++ E M   G++P    YN+L++G
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  G++N AK L   M S   K NV +Y+ LINGYCK K +E A  L+  +  +G+ P 
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V+T+NTL  G  +  ++E AF L   M   G   +   Y   I G C+ G + E   L  
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++    + D  +Y+ LI   C+    K A  L   +    L    +TYNI+++  C +G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  A +L   ME +G   + V +N L+ G  R  +      LL+ M E+
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK 577



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+ + + L+  +    +     E F        K +V S + L++   K  E  G   +Y
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM+ + I P ++T+NT+  GL ++ ++ +A  + D+M+  G   +   Y T IDG CK 
Sbjct: 219 KEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKM 278

Query: 284 GYI---VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           G +    +A  + + +   K   +  +++ LIDG CK   L  A ++F  +    L   V
Sbjct: 279 GRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTV 338

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTYN +++ LC +GK+++A  L  +M +  + P+ + +N L+ G  +     +  EL   
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDN 398

Query: 401 MDER 404
           + ++
Sbjct: 399 IGKQ 402



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 15/296 (5%)

Query: 120 EMMDQG-VQPNVVT--FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++M  G V P +V   F+    EL  N  +E   +LL L+      P      +++D F 
Sbjct: 78  QLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKI---RSILDSF- 133

Query: 177 LTGRVNRAKELFVSMESMG----CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           + G  N +  L     S+     C +++ +  +L+  Y +N +    L  +        K
Sbjct: 134 VKGETNCSISLIFHSLSVCSGQFCANSIIA-DMLVLAYVENSKTVLGLEAFKRAGDYRYK 192

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
            +V++ N L   L + ++      ++ EM R  ++ +   + T I+GLCK G + +A ++
Sbjct: 193 LSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDV 252

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE---LFHSLPRGVLIADVVTYNIMIHA 349
              +++     ++ +Y+ LIDG CK GR+   ++   +   +    +  + VT+N++I  
Sbjct: 253 VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDG 312

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            C D  +  A  +F +M+++G+ P  V +N+L+ G     + ++   LL  M   N
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 223/474 (47%), Gaps = 80/474 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  + A G  PN + Y++LI+G  ++G    A +LF+EM+          +PD +
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG------YRPDVI 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK G  ++A +   +M      P+VVTY ++I+G         A R+   M
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY------------- 168
           +  G  P+ VT+  ++D  CK G+++EA+QLL+ + +    PN  +Y             
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486

Query: 169 -NTLMD----------------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            NTL D                      G C TGR++ A  +F  M S GCK +  +Y+I
Sbjct: 487 ENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546

Query: 206 LINGYCKNKE--IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           LING C+++E  +E A +L  ++   G  P  VTY  L IGL +I +V+RA K+ +E   
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G  AD  AY     GLC  G +  A+ LF+ +       D  +Y C+I+GL K  +L+ 
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLED 666

Query: 324 AW--------------------------------ELFHS----LPRGVLIADVVTYNIMI 347
           A                                 E FH     L RG L+  V+ Y+ +I
Sbjct: 667 ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALI 726

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           H  C   K+D A  LF DM ++G  P  V   +L  G +R+ +T K  ELL  M
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 215/442 (48%), Gaps = 43/442 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM+      G V  PD  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRA 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++T ++  L K   V +A+E+  QM+     PD + YN++I G   A  + EA ++   M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P  VT+ ++++ LCK G +E A +L  +M   G RPN+ +Y +L+ GF  +GR+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G + +V +++++I+G CK+   E A   + EM+  G KP VVTY T+
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +I +V  AF++   M  HG   D+  Y   +DG CK G + EA +L   L     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 302 ELDIRSYSCLID------------------------------------GLCKSGRLKIAW 325
             +++ YS L+                                     GLCK+GRL  A 
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALC--ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            +F  +       D  TYNI+I+ LC   + ++++A  L  D+E  G  PD V +  L +
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G  +  E  + V++L     R 
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRG 608



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 213/438 (48%), Gaps = 44/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +++  G  P+ I Y+T+I+GL + GH   AL + + M+         C P  V
Sbjct: 243 EAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML------AKACVPTEV 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK G +++A+EL   M      P+ V Y S+I GF  +    EA  LF EM
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+V+T +V++D LCK+G  E+A++  E M++ G +PN   Y T++ G    GRV
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + GC  +  +Y  L++G+CK   ++ A  L  E+      P +  Y++L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 242 FIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             GL +   VE     LF++ +      D     + I GLCK G + EA  +F+ +    
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 301 CELDIRSYSCLIDGLCKS--GRLKIAWELFHSL------PRGVLI--------------- 337
           C+ D  +Y+ LI+GLC+S   R++ A+ L H L      P  V                 
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 338 --------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
                         ADVV Y  +   LC  G++D+A  LF +M  +G APD  A+  ++ 
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 384 GCIRNNETSKVVELLHRM 401
           G I+  +     +    M
Sbjct: 657 GLIKGKKLEDACKFFDEM 674



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 210/438 (47%), Gaps = 47/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA  F ++   GC+PNV+TY+T+I GL + G    A  + + MI         C PD+V
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG------CFPDSV 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS---------- 111
            Y  ++DG CK G +D+A +LL ++   + +P++  Y+S+++G C               
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496

Query: 112 --------------------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN-- 143
                                     +EA R+F  M+ +G +P+  T++++++ LC++  
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
            ++E A  LL  +  +G  P+A  Y  L  G C  G V+RA ++     S G   +V +Y
Sbjct: 557 NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAY 616

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L  G C   +++ A+SL+ EM+ +G  P    Y  +  GL +  ++E A K FDEM  
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIG 676

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRL 321
            G       Y   +  LC  G + EA   F  + + + EL   +  Y  LI G CK+ ++
Sbjct: 677 KGQKPTVATYTALVQALCHAGNVDEAFHRFEGM-LARGELVGSVMIYDALIHGFCKALKV 735

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +LF  +     +   VT   +   L   GK +KA +L  +M A G  P    F  +
Sbjct: 736 DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795

Query: 382 MLGCIRNNETSKVVELLH 399
           + G  +++E+ K+++L+ 
Sbjct: 796 LDGLRKSDESGKLLKLVQ 813



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 1/346 (0%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y  +++ L  E    +   +  +M    I P+  ++N +IR F     +++A   F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCL 177
             M  +  +P++ TF +++D LCK G  E+A ++   M+ +G V P+  ++  ++     
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             RV  A+E+F  ME  G   +  +Y+ +I+G  K    + AL +   ML+K   PT VT
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L   L +   +ERA +LF  M   G   ++  Y + I G  K+G + EA  LF  + 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+ +++ +IDGLCKSG  + A + F  + RG    +VVTY  +I  L   G++ 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +   M A G  PD V +  L+ G  +     +  +LL  +D+
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 1/278 (0%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G Q +V T++ +M+ L       +   + E M++ G+ PN F +N L+  F  T R + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFI 243
              F  M+   CK ++ ++ IL++  CK    E A  ++ EM++ G + P    +  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            L +  +V+ A ++F +M++ G   D  AY T IDGL K G+  EAL++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
              +Y  L++ LCK+G L+ A ELF  +       + V Y  +IH     G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +M   G  PD +    ++ G  ++    +  +    M
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 44/297 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV--ALNLFEEMINGNGEFGVVCKPD 59
           EA  +F ++ + GC+P+  TY+ LINGLCR+    V  A  L  ++        V   PD
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM------VGYLPD 577

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           AV YT +  GLCK G VD+A ++L +   +  N DVV Y ++  G CY    + A  LF 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP---------------- 163
           EM+ QG  P+   +  I++ L K  K+E+A +  + MI  G +P                
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 164 --------------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
                               +  +Y+ L+ GFC   +V+ A +LF  M S G      + 
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           + L +G  ++ + E A  L  EM + G  P   T+  +  GL +  +  +  KL  E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F YN LM+        ++   +   M   G   N FS++ILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
            A++ +  M  K  KP + T+  L   L +    E+AF++F EM   G V  D   +   
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +  L K   + EA E+F  +       D  +Y+ +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +   VTY I++++LC  G +++A +LF  M A G  P+ V + +L+ G  ++    +   
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 397 LLHRMDE 403
           L   M E
Sbjct: 352 LFDEMVE 358


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 212/437 (48%), Gaps = 46/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +L   +   GC PN I Y TLI+ L +      AL L EEM      F + C PD  
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQ 289

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GLCK   +  A +L+ +M  +   PD +TY  ++ G C     NEA+++ I++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN    + +++    +G+++EA   L E MI  G +P+ F YN LM G C  G 
Sbjct: 350 ----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCK---------------------------- 212
           ++ A++L   M   GC+ NV +Y+IL+NG CK                            
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 213 -------NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   +++  AL+L SEM +KG KP + TYN+L  GL ++ +++ AF+LF  M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
             A+   Y T I  L + G   +AL L   +    C LD  +Y+ LI   CK G ++   
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL+  +    L AD ++ NIMI+ LC  GK+D A +   D   +G  PD V +N+++ G 
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 386 IRNNETSKVVELLHRMD 402
            +     + + L  R+ 
Sbjct: 646 CKVGRIKEALNLFDRLQ 662



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 206/413 (49%), Gaps = 38/413 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P+V T++ +I+GLC+      A  L + M+   G +     PD +
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML-LRGFY-----PDNM 324

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN------------------------------- 90
            Y  ++ GLC+ G +++A+++L+++   N                               
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 91  -INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
              PD+ TYN ++ G C     + A+ L  EM  +G +PNV+T++++++ LCK G +EEA
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +L  M   G+  N+ +YN L+   C   +V+ A  L   M + GCK ++F+Y+ LI G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   I+ A  L+  ML  G     VTYNTL   L      ++A  L ++M   G   D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   I   CK G I + LEL+  + +     D  S + +I+GLCK G++  A+E   
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
                  + D+VTYN +++ LC  G++ +A +LF  ++ +GV PD   +NT +
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 186/367 (50%), Gaps = 7/367 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEE-MINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           PN    +TLING   +G    A +   E MIN    FG   +PD   Y  ++ GLCKEG 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNILMHGLCKEGS 405

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A++L+ +M  +   P+V+TY  ++ G C A    EA  +  EM  +G+  N V ++ 
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+  K+  A  LL  M   G +P+ F YN+L+ G C   R++ A  LF +M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+   +    + AL+L ++ML +G     +TYN L     ++  +E+  
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L+++M   G+ ADT +    I+GLCK G +  A E  R         DI +Y+ +++GL
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GR+K A  LF  L    +  D  TYN  I   C +G ++ A   F      G  P  
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSN 705

Query: 376 VAFNTLM 382
           + +N L+
Sbjct: 706 LTWNVLV 712



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 6/338 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG +P++ TY+ L++GLC+ G    A +L  EM          C+P+ + Y  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G +++A  +L +M  + +  + V YN +I   C     + A  L  EM  +G +P++ T
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LCK  +++EA +L   M+  G   N   YNTL+      G   +A  L   M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC  +  +Y+ LI  +CK   IE  L LY +M+  G+    ++ N +  GL ++ +V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+   +    G   D   Y + ++GLCK G I EAL LF  L++     D  +Y+  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
              CK G +  A   F+       +   +T+N++++ L
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTL 715



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 185/413 (44%), Gaps = 39/413 (9%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y   IN L   G       L ++++    E G+V +    I+  I+    K G   +A  
Sbjct: 115 YYVFINKLGAIGK----FKLIDKLLMQMKEEGIVFRES--IFMIIMKHYGKAGQPGQAIR 168

Query: 82  LLLQMKDKNI-NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           LLL M+   +  P   +Y+ V+      N    A  +F +M+ +GV P V TF ++M  L
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C   +++ A  LL  M + G  PN+ VY TL+       +V+ A +L   M  MGC  +V
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-- 258
            +++ +I+G CK  +I  A  L   ML +G  P  +TY  L  GL  I ++  A K+   
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 259 ------------------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
                                         + M   G   D + Y   + GLCK G +  
Sbjct: 349 IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L   +    CE ++ +Y+ L++GLCK+G L+ A  + H +    L  + V YN +I 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC   K+  A +L  +M  KG  PD   +N+L+ G  + +   +   L H M
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 6/345 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ L   G      +LL+QMK++ I      +  +++ +  A    +A RL ++M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               + +P   ++ ++++ L      + A+ +   M+  GV P  F +  +M   C+   
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   M   GC  N   Y  LI+   +  ++  AL L  EM   G  P V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +++++  A KL D M   G   D   Y   + GLC+ G + EA ++   L  + 
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIP 350

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           C  +    + LI+G   SG+LK A    + ++       D+ TYNI++H LC +G +  A
Sbjct: 351 CP-NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            DL  +M  +G  P+ + +  L+ G  +     +   +LH M  R
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 6/259 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +++   GC+P++ TY++LI GLC+      A  LF  M+      G V   + V 
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVT 532

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I  L + G   KA  L+  M  +    D +TYN +I+ FC   +  +   L+ +M+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+  + ++ +++++ LCK GK++ A + L   I  G  P+   YN++++G C  GR+ 
Sbjct: 593 MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIK 652

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  ++  G + + F+Y+  I+  CK   +  A   +   +  G  P+ +T+N L 
Sbjct: 653 EALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712

Query: 243 IGLFEIHQVERAFKLFDEM 261
             L +    E  F + DE+
Sbjct: 713 YTLLKQSNQENNFFVLDEL 731


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 217/465 (46%), Gaps = 68/465 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+   GCEPN  ++  L+ G CR G T   L L  EM        +   P+ V
Sbjct: 74  DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRR------LGFSPNKV 127

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I   CKEG  D A++L+ +M+   ++PDVVT+N+ I   C +    EA R+F +M
Sbjct: 128 VYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187

Query: 122 MDQGV----QPNVVTFSVIMDELCKNGKMEEASQLLEL---------------------- 155
               V    QPN++T+++++   CK G +EEA  L E                       
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247

Query: 156 -------------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                        M+ +G+ PN + YN +MDG C  G +  A+ L   M S G   +  +
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ L++GYC   ++  A ++  EM+  G  P   T N L   L++  ++  A +L  +M 
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI-----------------------L 299
             G   DT      IDGLC NG + +A+E+   +                          
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           KC  D+ SYS +I GLCK+GR+  A + F  +    L  D   Y++ IH+ C +GK+  A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  DME KG       +N+L++G    N+  ++  L+  M ER
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER 532



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 182/351 (51%), Gaps = 4/351 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P   +Y  ++    KEG VD    L   M    ++P+  T+N +I   C +   ++A+ L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M ++G +PN  +F +++   C+ G   +  +LL  M ++G  PN  VYNTL+  FC 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----KP 233
            G+ + A++L   M   G   +V +++  I+  C + ++  A  ++ +M    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            ++TYN +  G  +   +E A  LF++M+      +  +Y  ++ GL + G ++EA  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
           + +  +  E ++ SY+ ++DGLCK+G L  A  L   +    ++ D VTY  ++H  C  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           GK+ +A+++  +M   G +P+    N L+    +    S+  ELL +M+E+
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 200/430 (46%), Gaps = 36/430 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF K+K      N  +Y+  + GL R G  + A  + +EM++   E      P+  
Sbjct: 218 EARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGME------PNVY 271

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLCK G +  A+ L+  M    + PD VTY +++ G+C+    +EA  +  EM
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G  PN  T ++++  L K G++ EA +LL+ M + G   +    N ++DG C  G++
Sbjct: 332 MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKL 391

Query: 182 NRAKELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIEG 218
           ++A E+   M + G                       C  ++ SYS +I+G CK   +  
Sbjct: 392 DKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGE 451

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A   + EM+ K ++P    Y+       +  ++  AF++  +M++ G       Y + I 
Sbjct: 452 AKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIM 511

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GL     I E   L   +R      D+  Y+ ++  LC+ GR+K A  +   + +  +  
Sbjct: 512 GLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISP 571

Query: 339 DVVTYNIMIHALCAD---GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           ++ +++I+I A C       +D+  ++ L++     A   + FN L++G     E  K  
Sbjct: 572 NISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAK 627

Query: 396 ELLHRMDERN 405
           EL     +R+
Sbjct: 628 ELFETALDRS 637



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 65/461 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   G EPNV +Y+ +++GLC+ G    A  L   M +     GV+  PD 
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS----GVL--PDT 305

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YTT++ G C  G V +A  +L +M     +P+  T N ++         +EA+ L  +
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQK 365

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------ 162
           M ++G   + VT ++++D LC NGK+++A +++  M   G                    
Sbjct: 366 MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425

Query: 163 -----PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+   Y+T++ G C  GRV  AK+ F+ M     + +   Y + I+ +CK  +I 
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  +M  KG   T+ TYN+L +GL   +Q+   + L DEM+  GV+ D   Y   +
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS------------------- 318
             LC+ G + +A  +   +       +I S+S LI   CK+                   
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH 605

Query: 319 ---------------GRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                          G +  A ELF + L R   + + + Y  +I  LC D K+D A  +
Sbjct: 606 KEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFL-YKDLIDHLCKDEKLDDASGI 664

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              +  KG   D  +F  ++ G  +     +  EL  +M E
Sbjct: 665 LHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 145/305 (47%), Gaps = 12/305 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P++I+YST+I+GLC+ G    A   F EM+  N       +PD+ IY   I   CKEG
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN------LQPDSAIYDVFIHSFCKEG 482

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +  A  +L  M+ K  N  + TYNS+I G    N   E   L  EM ++GV P+V  ++
Sbjct: 483 KISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYN 542

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LC+ G++++A  +L+ M+Q G+ PN   ++ L+  FC     +   E+F    ++
Sbjct: 543 NVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV 602

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            C H    YS+  N      E+  A  L+   L +        Y  L   L +  +++ A
Sbjct: 603 -CGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDA 661

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR-----SYS 309
             +  ++   G   D  ++   IDGL K G   EA EL   +  +  E  ++     + S
Sbjct: 662 SGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNAS 721

Query: 310 CLIDG 314
           C I G
Sbjct: 722 CSIQG 726



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 40/232 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  GC   + TY++LI GL           L +EM     E GV   PD  I
Sbjct: 487 AFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM----RERGV--SPDVSI 540

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN---------- 112
           Y  ++  LC+ G V  A  +L +M  K I+P++ +++ +I+ FC A D +          
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIAL 600

Query: 113 ------------------------EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
                                   +AK LF   +D+        +  ++D LCK+ K+++
Sbjct: 601 NVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDD 660

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           AS +L  +I  G   +   +  ++DG    G  + A EL   M  M  +  V
Sbjct: 661 ASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKV 712



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++  ++   G  PN+ ++S LI   C+         +FE  +N       VC     
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALN-------VCGHKEA 608

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+   + L   G V KAKEL     D++ +     Y  +I   C     ++A  +  ++
Sbjct: 609 LYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKL 668

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           +D+G   +  +F  ++D L K G   EA +L E M+++
Sbjct: 669 IDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEM 706


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 212/437 (48%), Gaps = 46/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +L   +   GC PN I Y TLI+ L +      AL L EEM      F + C PD  
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQ 289

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GLCK   +  A +L+ +M  +   PD +TY  ++ G C     NEA+++ I++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN    + +++    +G+++EA   L E MI  G +P+ F YN LM G C  G 
Sbjct: 350 ----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCK---------------------------- 212
           ++ A++L   M   GC+ NV +Y+IL+NG CK                            
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 213 -------NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   +++  AL+L SEM +KG KP + TYN+L  GL ++ +++ AF+LF  M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
             A+   Y T I  L + G   +AL L   +    C LD  +Y+ LI   CK G ++   
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL+  +    L AD ++ NIMI+ LC  GK+D A +   D   +G  PD V +N+++ G 
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 386 IRNNETSKVVELLHRMD 402
            +     + + L  R+ 
Sbjct: 646 CKVGRIKEALNLFDRLQ 662



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 206/413 (49%), Gaps = 38/413 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P+V T++ +I+GLC+      A  L + M+   G +     PD +
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML-LRGFY-----PDNM 324

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN------------------------------- 90
            Y  ++ GLC+ G +++A+++L+++   N                               
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 91  -INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
              PD+ TYN ++ G C     + A+ L  EM  +G +PNV+T++++++ LCK G +EEA
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             +L  M   G+  N+ +YN L+   C   +V+ A  L   M + GCK ++F+Y+ LI G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   I+ A  L+  ML  G     VTYNTL   L      ++A  L ++M   G   D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   I   CK G I + LEL+  + +     D  S + +I+GLCK G++  A+E   
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
                  + D+VTYN +++ LC  G++ +A +LF  ++ +GV PD   +NT +
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 186/367 (50%), Gaps = 7/367 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEE-MINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           PN    +TLING   +G    A +   E MIN    FG   +PD   Y  ++ GLCKEG 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNILMHGLCKEGS 405

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A++L+ +M  +   P+V+TY  ++ G C A    EA  +  EM  +G+  N V ++ 
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+  K+  A  LL  M   G +P+ F YN+L+ G C   R++ A  LF +M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+   +    + AL+L ++ML +G     +TYN L     ++  +E+  
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L+++M   G+ ADT +    I+GLCK G +  A E  R         DI +Y+ +++GL
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GR+K A  LF  L    +  D  TYN  I   C +G ++ A   F      G  P  
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSN 705

Query: 376 VAFNTLM 382
           + +N L+
Sbjct: 706 LTWNVLV 712



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 6/338 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG +P++ TY+ L++GLC+ G    A +L  EM          C+P+ + Y  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G +++A  +L +M  + +  + V YN +I   C     + A  L  EM  +G +P++ T
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LCK  +++EA +L   M+  G   N   YNTL+      G   +A  L   M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC  +  +Y+ LI  +CK   IE  L LY +M+  G+    ++ N +  GL ++ +V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+   +    G   D   Y + ++GLCK G I EAL LF  L++     D  +Y+  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
              CK G +  A   F+       +   +T+N++++ L
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTL 715



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 185/413 (44%), Gaps = 39/413 (9%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y   IN L   G       L ++++    E G+V +    I+  I+    K G   +A  
Sbjct: 115 YYVFINKLGAIGK----FKLIDKLLMQMKEEGIVFRES--IFMIIMKHYGKAGQPGQAIR 168

Query: 82  LLLQMKDKNI-NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           LLL M+   +  P   +Y+ V+      N    A  +F +M+ +GV P V TF ++M  L
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C   +++ A  LL  M + G  PN+ VY TL+       +V+ A +L   M  MGC  +V
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-- 258
            +++ +I+G CK  +I  A  L   ML +G  P  +TY  L  GL  I ++  A K+   
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 259 ------------------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
                                         + M   G   D + Y   + GLCK G +  
Sbjct: 349 IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L   +    CE ++ +Y+ L++GLCK+G L+ A  + H +    L  + V YN +I 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC   K+  A +L  +M  KG  PD   +N+L+ G  + +   +   L H M
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 6/345 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ L   G      +LL+QMK++ I      +  +++ +  A    +A RL ++M
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               + +P   ++ ++++ L      + A+ +   M+  GV P  F +  +M   C+   
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   M   GC  N   Y  LI+   +  ++  AL L  EM   G  P V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +++++  A KL D M   G   D   Y   + GLC+ G + EA ++   L  + 
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIP 350

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           C  +    + LI+G   SG+LK A    + ++       D+ TYNI++H LC +G +  A
Sbjct: 351 CP-NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            DL  +M  +G  P+ + +  L+ G  +     +   +LH M  R
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 6/259 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +++   GC+P++ TY++LI GLC+      A  LF  M+      G V   + V 
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVT 532

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I  L + G   KA  L+  M  +    D +TYN +I+ FC   +  +   L+ +M+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+  + ++ +++++ LCK GK++ A + L   I  G  P+   YN++++G C  GR+ 
Sbjct: 593 MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIK 652

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  ++  G + + F+Y+  I+  CK   +  A S +   +  G  P+ +T+N L 
Sbjct: 653 EALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712

Query: 243 IGLFEIHQVERAFKLFDEM 261
             L +    E  F + DE+
Sbjct: 713 YTLLKQSNQENNFFVLDEL 731


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 212/396 (53%), Gaps = 7/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K++  GC PNV+TY+TLI+G C+         L   M     E      P+ + 
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE------PNLIS 277

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+GLC+EG + +   +L +M  +  + D VTYN++I+G+C   + ++A  +  EM+
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+T++ ++  +CK G M  A + L+ M   G+ PN   Y TL+DGF   G +N
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   M   G   +V +Y+ LING+C   ++E A+++  +M  KG+ P VV+Y+T+ 
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V+ A ++  EM   G+  DT  Y + I G C+     EA +L+  +  +   
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LI+  C  G L+ A +L + +    ++ DVVTY+++I+ L    +  +A  L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            L +  +   P  V ++TL+  C  N E   VV L+
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENC-SNIEFKSVVSLI 612



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++      PNV TY+ LI G C  G+  VAL LF++M          C P+ V 
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG------CLPNVVT 242

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG CK   +D   +LL  M  K + P++++YN VI G C      E   +  EM 
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   + VT++ ++   CK G   +A  +   M++ G+ P+   Y +L+   C  G +N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA E    M   G   N  +Y+ L++G+ +   +  A  +  EM   G  P+VVTYN L 
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     ++E A  + ++M+  G++ D  +Y T + G C++  + EAL + R +     +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +YS LI G C+  R K A +L+  + R  L  D  TY  +I+A C +G ++KA  L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KGV PD V ++ L+ G  + + T +   LL ++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 196/370 (52%), Gaps = 28/370 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +  ++   G  P+VITY++LI+ +C+ G+   A+   ++M + G      +C P+ 
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG------LC-PNE 380

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTT++DG  ++G++++A  +L +M D   +P VVTYN++I G C      +A  +  +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P+VV++S ++   C++  ++EA ++   M++ G++P+   Y++L+ GFC   R
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +L+  M  +G   + F+Y+ LIN YC   ++E AL L++EM+ KG+ P VVTY+ 
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +   A +L  ++           Y T I+  C N                 
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN----------------- 602

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             ++ +S   LI G C  G +  A ++F S+       D   YNIMIH  C  G + KA+
Sbjct: 603 --IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 361 DLFLDMEAKG 370
            L+ +M   G
Sbjct: 661 TLYKEMVKSG 670



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 198/395 (50%), Gaps = 7/395 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +A G  P V++Y+ +++   R+   I  A N+F+EM+           P+   Y  +I G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ------VSPNVFTYNILIRG 214

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C  G +D A  L  +M+ K   P+VVTYN++I G+C     ++  +L   M  +G++PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +++++V+++ LC+ G+M+E S +L  M + G   +   YNTL+ G+C  G  ++A  +  
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   +V +Y+ LI+  CK   +  A+    +M  +G+ P   TY TL  G  +  
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            +  A+++  EM  +G +     Y   I+G C  G + +A+ +   ++      D+ SYS
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            ++ G C+S  +  A  +   +    +  D +TY+ +I   C   +  +A DL+ +M   
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ PD   +  L+       +  K ++L + M E+
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 182/351 (51%), Gaps = 1/351 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NE 113
           +C   + ++  ++    +   +DKA  ++   +     P V++YN+V+     +  + + 
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+ +F EM++  V PNV T+++++   C  G ++ A  L + M   G  PN   YNTL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C   +++   +L  SM   G + N+ SY+++ING C+   ++    + +EM  +G   
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             VTYNTL  G  +     +A  +  EM RHG+      Y + I  +CK G +  A+E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +R+     + R+Y+ L+DG  + G +  A+ +   +        VVTYN +I+  C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           GKM+ A  +  DM+ KG++PD V+++T++ G  R+ +  + + +   M E+
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 137/251 (54%), Gaps = 21/251 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+   +K  G  P+V++YST+++G CR+     AL +  EM+    E G+  KPD +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGI--KPDTI 486

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I G C++    +A +L  +M    + PD  TY ++I  +C   D  +A +L  EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
           +++GV P+VVT+SV+++ L K  +  EA +LL  +      P+   Y+TL++        
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606

Query: 174 -------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G +  A ++F SM     K +  +Y+I+I+G+C+  +I  A +LY EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666

Query: 227 LSKGIKPTVVT 237
           +  G     VT
Sbjct: 667 VKSGFLLHTVT 677



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 9/161 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL-----FEEMINGNGEFGVVC 56
           +A  L  ++   G  P+V+TYS LINGL +   T  A  L     +EE +  +  +  + 
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597

Query: 57  KPDAVI----YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           +  + I      ++I G C +G + +A ++   M  KN  PD   YN +I G C A D  
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +A  L+ EM+  G   + VT   ++  L K GK+ E + ++
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 211/402 (52%), Gaps = 10/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G + NV+TY+ +I G+ + G    A++LF EM+    E      PD  
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE------PDTW 417

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +IDG  K   + KA ELL +MK + + P   TY+ +I G C+++D  +A  +  +M
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PNV  +  ++    +  + E A +LL++MI  GV P+ F YN L+ G C   +V
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK L V M   G K N  +Y   IN Y K+ EI+ A   + +MLS GI P  V Y  L
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++     A   F  M   G+  D  AY   I  L KNG   EA+ +F  L+ LK 
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKT 655

Query: 302 EL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  D+  Y+ LI G CK G ++ A +L+  +    +  ++V YN +I+ LC  G++ KA
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +LF ++E K + PD V ++T++ G  ++   ++  +L   M
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 216/399 (54%), Gaps = 7/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G +PN  TY   IN   ++G   VA   F++M++     G+V  P+ V
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS----GIV--PNNV 592

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C  G   +A      M +K + PD+  Y+++I        + EA  +F++ 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+V  ++ ++   CK G +E+ASQL + M+  G+ PN  VYNTL++G C  G V
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ELF  +E      +V +YS +I+GYCK+  +  A  L+ EM+SKGI P    Y  L
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E+A  LF E Q+  V + + A+ + ID  CK+G ++EA ELF  +   K 
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKL 831

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ LID   K+  ++ A +LF  +    +I + +TY  ++ +    G   K   
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 891

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           LF DMEA+G+A D +A+  +     +  ++ + ++LL++
Sbjct: 892 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/408 (33%), Positives = 215/408 (52%), Gaps = 14/408 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  + + G  PN  TY+ LI+G  + G+   AL + +EMI          K + V
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG------LKLNVV 382

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G+ K G + KA  L  +M    + PD  TYN +I G+  ++D  +A  L  EM
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  T+SV++  LC +  +++A+++L+ MI+ GV+PN F+Y TL+  +    R 
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M + G   ++F Y+ LI G C+ K++E A  L  +M  KGIKP   TY   
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA- 561

Query: 242 FIGLF----EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           FI L+    EI   ER FK   +M   G+  +   Y   I G C  G  VEAL  F+ + 
Sbjct: 562 FINLYSKSGEIQVAERYFK---DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DIR+YS +I  L K+G+ K A  +F    +  ++ DV  YN +I   C +G ++
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           KA  L+ +M   G+ P+ V +NTL+ G  +  E +K  EL   ++E++
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 211/402 (52%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   + A G  P++  Y+ LI GLCR      A  L  +M    GE G+  KP+A  
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM----GEKGI--KPNAHT 558

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   I+   K G +  A+     M    I P+ V Y  +I+G C   ++ EA   F  M+
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P++  +S I+  L KNGK +EA  +    ++ GV P+ F+YN+L+ GFC  G + 
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A +L+  M   G   N+  Y+ LING CK  E+  A  L+ E+  K + P VVTY+T+ 
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTII 738

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   +  AFKLFDEM   G++ D + Y   IDG  K G + +AL LF   +  K  
Sbjct: 739 DGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSV 797

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +++ LID  CK G++  A ELF  +    L  ++VTY I+I A      M++A  L
Sbjct: 798 GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 857

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           FLDME + + P+ + + +L+L   +     K++ L   M+ R
Sbjct: 858 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 212/439 (48%), Gaps = 42/439 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++KA    P+  TYS LI+GLC +     A  + ++MI  NG      KP+  
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG-----VKPNVF 487

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I    +E   + A ELL  M    + PD+  YN +I G C A    EAK L ++M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
            ++G++PN  T+   ++   K+G+++ A +  + M+  G+ PN  +Y  L+ G C     
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 177 ------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           G+   A  +F+     G   +VF Y+ L
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK  +IE A  LY EML  GI P +V YNTL  GL ++ +V +A +LFDE++   +
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y T IDG CK+G + EA +LF  +       D   Y  LIDG  K G L+ A  
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LFH   +   +  +  +N +I + C  GK+ +A +LF DM  K + P+ V +  L+    
Sbjct: 788 LFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 846

Query: 387 RNNETSKVVELLHRMDERN 405
           +     +  +L   M+ RN
Sbjct: 847 KAEMMEEAEQLFLDMETRN 865



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 210/397 (52%), Gaps = 8/397 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  +F K    G  P+V  Y++LI+G C+ G    A  L++EM++ NG       P+ V
Sbjct: 644  EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NG-----INPNIV 697

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +Y T+I+GLCK G V KA+EL  ++++K++ PDVVTY+++I G+C + +  EA +LF EM
Sbjct: 698  VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G+ P+   + +++D   K G +E+A  L     Q  V   +  +N+L+D FC  G+V
Sbjct: 758  ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKV 816

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A+ELF  M       N+ +Y+ILI+ Y K + +E A  L+ +M ++ I P  +TY +L
Sbjct: 817  IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             +   +I    +   LF +M+  G+A D  AY       CK G  +EAL+L     +   
Sbjct: 877  LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +L+   +  LI  LCK  ++    EL   + +  L     T N ++      G  D+A  
Sbjct: 937  KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            +   M+  G  P  ++  T  +   R++  S + ++L
Sbjct: 997  VLGVMQRLGWVPTSLSL-TDSISTGRDDMKSDISQVL 1032



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 205/422 (48%), Gaps = 41/422 (9%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+PN+ TY+  I GLC+TG    AL + + M+    E G+   PD   YT ++DG CK+ 
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGHTYTLLVDGFCKQK 325

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
              +AK +   M    +NP+  TY ++I GF    +  EA R+  EM+ +G++ NVVT++
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  + K G+M +A  L   M+  G+ P+ + YN L+DG+  +  + +A EL   M++ 
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               + F+YS+LI+G C + +++ A  +  +M+  G+KP V  Y TL     +  + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L   M  +GV  D + Y   I GLC+   + EA  L   +     + +  +Y   I+ 
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565

Query: 315 LCKSGRLKIAWELFHSL------PRGV-----------------------------LIAD 339
             KSG +++A   F  +      P  V                             LI D
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +  Y+ +IH+L  +GK  +A  +FL     GV PD   +N+L+ G  +  +  K  +L  
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685

Query: 400 RM 401
            M
Sbjct: 686 EM 687



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 174/320 (54%), Gaps = 1/320 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            M +  I PDV TY +VI+  C   D  + K +  EM ++  +PN+ T++  +  LC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            ++EA ++ +LM++ G+ P+   Y  L+DGFC   R   AK +F SM S G   N F+Y+
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G+ K   IE AL +  EM+++G+K  VVTYN +  G+ +  ++ +A  LF+EM   
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  DTW Y   IDG  K+  + +A EL   ++  K      +YS LI GLC S  L+ A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            E+   + R  +  +V  Y  +I A   + + + A +L   M A GV PD   +N L++G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 385 CIRNNETSKVVELLHRMDER 404
             R  +  +   LL  M E+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEK 550



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 188/368 (51%), Gaps = 7/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY+ +I   C+ G  I    +  EM          CKP+   Y   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A E+   M +K + PD  TY  ++ GFC    S EAK +F  M   G+ PN  T++ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D   K G +EEA ++ + MI  G++ N   YN ++ G    G + +A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + + ++Y++LI+GY K+ ++  A  L +EM ++ + P+  TY+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D+M R+GV  + + Y T I    +      A+EL + +       D+  Y+CLI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           ++ +++ A  L   +    +  +  TY   I+     G++  A   F DM + G+ P+ V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 377 AFNTLMLG 384
            +  L+ G
Sbjct: 593 IYTILIKG 600


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +L+ FG  PNV+ Y+TLI+G C+ G    A +LF EM    G+FG+V   +   YT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K G   +  E+  +M++  + P++ TYN V+   C    + +A +LF EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERG 298

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V  N+VT++ ++  LC+  K  EA+++++ M   G+ PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+CK  +  GA  +  EM  +GIKP+ +TY  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             +  +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+ +   K E + 
Sbjct: 419 ARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNK 478

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ ++ G CK G    A  LF  +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 366 MEAKGVAP 373
           M   G+ P
Sbjct: 539 MIDTGIDP 546



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 184/346 (53%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   +  +I G C+ G ++K+ +LL+++++   +P+VV Y ++I G C   +  +AK LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G+  N  T++V++  L KNG  ++  ++ E M + GV PN + YN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR   A +LF  M   G   N+ +Y+ LI G C+  +   A  +  +M S GI P ++TY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  G   + ++ +A  L  +++  G++     Y   + G CK G    A ++ + +  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +    +Y+ LID   +   ++ A +L   +    L  DV TY+++IH  C  G+M++
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF  M AK + P+ V +NT++LG  +   + + + L   M+E+
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK 507



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 168/323 (52%), Gaps = 6/323 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++  FG   N  TY+ LI+GL + G       ++E+M     E GV   P+  
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM----QEDGVF--PNLY 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++  CK+G    A +L  +M+++ ++ ++VTYN++I G C    +NEA ++  +M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN++T++ ++D  C  GK+ +A  L   +   G+ P+   YN L+ GFC  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   ME  G K +  +Y+ILI+ + +   +E A+ L S M   G+ P V TY+ L
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     Q+  A +LF  M    +  +   Y T + G CK G    AL LFR +   + 
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA 324
             ++ SY  +I+ LCK  + K A
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEA 532



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 171/342 (50%), Gaps = 1/342 (0%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +I+   +   +D +     +M DK   P    +N+++     ++  N+  R F E 
Sbjct: 96  LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V  +V +F +++   C+ G++E++  LL  + + G  PN  +Y TL+DG C  G +
Sbjct: 156 KIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AK+LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P + TYN +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  + + AFKLFDEM+  GV+ +   Y T I GLC+     EA ++   ++    
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LIDG C  G+L  A  L   L    L   +VTYNI++   C  G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +ME +G+ P  + +  L+    R +   K ++L   M+E
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE 436



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 146/265 (55%), Gaps = 6/265 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF +++  G   N++TY+TLI GLCR      A  + ++M +          P+ +
Sbjct: 286 DAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG------INPNLI 339

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C  G + KA  L   +K + ++P +VTYN ++ GFC   D++ A ++  EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ +T+++++D   +   ME+A QL   M ++G+ P+   Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  LF  M +   + N   Y+ ++ GYCK      AL L+ EM  K + P V +Y  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              L +  + + A  L ++M   G+
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGI 544



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 127/233 (54%), Gaps = 6/233 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++K+ G  PN+ITY+TLI+G C  G    AL+L  ++ +          P  V
Sbjct: 321 EANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G CK+G    A +++ +M+++ I P  +TY  +I  F   ++  +A +L   M
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V T+SV++   C  G+M EAS+L +LM+   + PN  +YNT++ G+C  G  
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            RA  LF  ME      NV SY  +I   CK ++ + A  L  +M+  GI P+
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 155/307 (50%), Gaps = 1/307 (0%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  +I  +  +   + +   F EM+D+G  P    F+ ++  +  +    +  +      
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN-ES 155

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +I V  + + +  ++ G C  G + ++ +L V +   G   NV  Y+ LI+G CK  EIE
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L+ EM   G+     TY  L  GLF+    ++ F+++++MQ  GV  + + Y   +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +  CK+G   +A +LF  +R      +I +Y+ LI GLC+  +   A ++   +    + 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +++TYN +I   C  GK+ KA  L  D++++G++P  V +N L+ G  +  +TS   ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 398 LHRMDER 404
           +  M+ER
Sbjct: 396 VKEMEER 402



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF  + A   EPN + Y+T++ G C+ G +  AL LF EM            P+  
Sbjct: 461 EASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE------LPPNVA 514

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
            Y  +I+ LCKE    +A+ L+ +M D  I+P     N + R     NDS+
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA---KNDSH 562


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 205/404 (50%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAF----GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           +A  L  KLK F    G  P+V TYST I   C+      A  +FEEM   +      C 
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD------CA 275

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            + V Y  +I GLC+ G V++A     +M D  ++PD  TY +++ G C  +   EAK L
Sbjct: 276 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL 335

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM   G++PN+V +  ++D   K GK  EA  +L+ MI  GV+PN  +Y+ L+ G C 
Sbjct: 336 LDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++ RA +L   M  +G + + F+Y+ L+ G+ +  + +GA  L +EM + GI P V +
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  +  GL +  + + A  L +EM   G+  + + Y   I G  K G I  A E    + 
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  Y+ LI GL   GR++ A E +  + +  L+ D  TY+ +IH  C  G ++
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           KA  L   M   G+ P+   +  L+ G  ++N+  KV  +L  M
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 234/507 (46%), Gaps = 110/507 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +PN++ Y TL++G  + G T  A ++ +EMI+     GV  +P+ +
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA----GV--QPNKI 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +I GLCK G + +A +LL +M    + PD  TYN +++G    +D + A  L  EM
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY------------- 168
            + G+ PNV ++ ++++ LC+NG+ +EA  LLE MI  G++PNAF+Y             
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 169 ----------------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                 N+L+ G    GR+  A+E +  ++  G   + F+YS L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER------------- 253
           I+GYCK   +E A  L  +ML+ G+KP   TY  L  G F+ +  E+             
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 254 ----------------------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                                 AF +  E++++G+  D   Y + I GLCK   + +A+ 
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +     E  I  Y+ LIDG C+SG +  A  +F S+    L+ + VTY  +I   C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVA---------------------------------- 377
            +G +  A DL+ +M  +G+APD                                     
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL 804

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           FNTL+ G  +  +  +  +LLH M +R
Sbjct: 805 FNTLVHGFCKRGKLQETEKLLHVMMDR 831



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 205/395 (51%), Gaps = 10/395 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +++   C  N +TY+ +I+GLCR+G    A    EEM+    ++G+   PDA  
Sbjct: 262 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV----DYGL--SPDAFT 315

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++GLCK   + +AK LL +M    + P++V Y +++ GF     + EA  +  EM+
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GVQPN + +  ++  LCK G++  AS+LL+ MI++G+RP+ F YN LM G       +
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M + G   NV+SY I+ING C+N E + A +L  EM+S+G+KP    Y  L 
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           IG  +   +  A +  ++M +  V  D + Y + I GL   G + EA E +  ++     
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLV 555

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +YS LI G CK+G L+ A +L   +    L  +  TY  ++         +K   +
Sbjct: 556 PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSI 615

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              M   G  PD    N +    IRN   S+ +E+
Sbjct: 616 LQSMLGSGDKPD----NHIYGIVIRNLSRSENMEV 646



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 180/377 (47%), Gaps = 23/377 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +++  G  P+  TYS LI+G C+TG+   A  L  +M+N         KP+A 
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG------LKPNAD 594

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K    +K   +L  M      PD   Y  VIR    + +   A  +  E+
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++  +S ++  LCK   ME+A  LL+ M + G+ P    YN L+DGFC +G +
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA+ +F S+ + G   N  +Y+ LI+G CKN +I  A  LY EML +GI P    YN L
Sbjct: 715 SRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL 774

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E+A  L +EM   G  A+   + T + G CK G + E  +L   +   + 
Sbjct: 775 ATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREI 833

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + ++   ++    K+G+L  A  +F  L +                  +    D+   
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ---------------KKASQSATDRFSL 878

Query: 362 LFLDMEAKG-VAPDCVA 377
           LF DM  KG + P C A
Sbjct: 879 LFTDMINKGLIPPKCDA 895



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 181/408 (44%), Gaps = 8/408 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRT-----GHTIVALNLFEEMINGNGEFGVVCK 57
           +A  F +L A  C  ++   +   NGL         H  + L   +  I           
Sbjct: 114 SADAFARLAASLCAASLFPQA---NGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPS 170

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P   +   ++D   K G V  A +++L M D  + P     N +++    A+      +L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G+ P+V T+S  ++  CK    + A ++ E M +     N   YN ++ G C 
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G V  A      M   G   + F+Y  L+NG CK   ++ A +L  EM   G+KP +V 
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G  +  +   AF +  EM   GV  +   Y   I GLCK G +  A +L + + 
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D  +Y+ L+ G  +      A+EL + +    ++ +V +Y IMI+ LC +G+  
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A +L  +M ++G+ P+   +  L++G  +    S   E L +M + N
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 23/370 (6%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-----------------------KDKNI 91
           +  P A  +  +   LC      +A  LL QM                       + ++ 
Sbjct: 110 IAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSP 169

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P     + ++  +        A ++ + M D G+ P     + ++ +L +   ME   +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   M   G+ P+ + Y+T ++  C     + AK++F  M    C  N  +Y+++I+G C
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           ++  +E A     EM+  G+ P   TY  L  GL +  +++ A  L DEM   G+  +  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y T +DG  K G   EA ++ + +     + +   Y  LI GLCK G+L  A +L   +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            +  L  D  TYN ++         D A +L  +M   G+ P+  ++  ++ G  +N E+
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 392 SKVVELLHRM 401
            +   LL  M
Sbjct: 470 KEAGNLLEEM 479


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF + ++F C P V  ++ LI+ L  +G    A  ++++++         C+ D  
Sbjct: 48  DAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG------CQLDRF 101

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    + G +D A E+  +MK K   PD  TY  ++     A    EA+  F  M
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN+ T++++MD   K G+++ A  L   M + G +P+   YN L+D  C  GRV
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++LF  M   GC  + ++YS L+NG  K+  +E A  ++ EM+ +G+   +V YN+L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   ++R +KL  EM R G   D +++ T +D L K      A E+F  +    C
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ SY+ LID   + G    A ++   +     I +  TYN +IH L  DG++D+A  
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +ME  G  PD V +N LM    +  E  +   L  +M ++
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDK 444



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 174/348 (50%), Gaps = 6/348 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F  +   G  PN+ TY+ L++   + G   +AL LF EM           +P  V
Sbjct: 153 EARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG------FQPSVV 206

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D LC  G V  A++L  +M     +PD  TY++++ G   +    EA ++F EM
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV  ++V ++ ++  L K G M+   +L++ M + G  P+AF +NT+MD      + 
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+E+F  M   GCK ++ SY+ILI+ Y +  +   A  +  EM+  G  P   TYN+L
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    QV+ AF + +EM+  G   D   Y   +D L K G    A  LF+ ++    
Sbjct: 387 IHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           E D  SY+  IDGL    RL  A  LF  +       D   Y I+I A
Sbjct: 447 EPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 193/397 (48%), Gaps = 6/397 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++K  G EP+  TY  L+N L + G    A + F+ M+    E G+   P+   
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML----ERGLT--PNIPT 172

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++D   K G +D A  L  +MK +   P VVTYN ++   C A     A++LF +M 
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+  T+S +++ L K+G++EEA ++   M+  GV  +   YN+L+      G ++
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R  +L   M   G   + FS++ +++   K  + + A  +++ M+  G KP +++YN L 
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                     +A ++ +EM   G   +T  Y + I  L  +G + EA  +   +    C 
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCR 412

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ L+D L K G  + A  LF  +    +  D ++Y + I  L  D ++D+A  L
Sbjct: 413 PDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVL 472

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           F DM+A G   D   +  L+    R  +T    +L H
Sbjct: 473 FKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH 509



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 172/337 (51%), Gaps = 6/337 (1%)

Query: 70  LCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           L   G +D  + LL +M  + + + P+ +    +I  +   N S +A  LF +       
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P V  F+ ++D L  +G+ E A  + + ++Q G + + F YN L+  F  +G+++ A E+
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M+  G + + ++Y  L+N   K   ++ A S +  ML +G+ P + TYN L     +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           + Q++ A  LF EM+R G       Y   +D LC  G +  A +LF  +    C  D  +
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 308 YSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           YS L++GL KSGR++ A ++F  +  RGV + D+V YN ++  L   G MD+   L  +M
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAV-DLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             KG  PD  +FNT+M    + N+     E+  RM E
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 29/289 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI---------NGNGEFG 53
           A  LF K+   GC P+  TYSTL+NGL ++G    A  +F EM+         N N    
Sbjct: 224 ARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLA 283

Query: 54  VVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            + K                    PDA  + TI+D L K    D A+E+  +M +    P
Sbjct: 284 TLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D+++YN +I  +    D+ +A+++  EM++ G  P   T++ ++  L  +G+++EA  +L
Sbjct: 344 DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M   G RP+   YN LMD     G   RA  LF  M+  G + +  SY++ I+G   +
Sbjct: 404 EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFD 463

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
             ++ AL L+ +M + G       Y  L          E   +L  E Q
Sbjct: 464 DRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)

Query: 117 LFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           L  EM+ +G  ++PN  T   ++    +  K  +A  L          P    +  L+D 
Sbjct: 17  LLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
              +G   RA+ ++  +   GC+ + F+Y++LI  + ++ +++ A+ ++ EM  KG +P 
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD 134

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TY  L   L +  +V+ A   FD M   G+  +   Y   +D   K G +  AL LF 
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFA 194

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++    +  + +Y+ L+D LC +GR+  A +LFH +       D  TY+ +++ L   G
Sbjct: 195 EMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSG 254

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++++AH +F +M  +GVA D V +N+L+    +     +V +L+  M  +
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 215/389 (55%), Gaps = 13/389 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A++  +   G  P+  T++ L+N   +         LFEEM N N      C P+ +
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN------CSPNVI 160

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID +CK G V+KA ++ L MK +   P++ TY S+I G   +   ++A  LF EM
Sbjct: 161 TYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM 220

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+    V ++ ++  L ++G+ + A++L   M+  G++P+   + +L+ G  + GR 
Sbjct: 221 TSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRA 280

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +F     +GC  +V  Y++LI+  CK+K ++ A  ++ E+   G+ P V T+N L
Sbjct: 281 SEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNAL 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++  AF L  +M+R G   D   Y T IDGL K+G + EA +L   ++ L  
Sbjct: 341 MDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY 400

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAH 360
           E D+ +Y+ LID  CK GR++ A  LF  +  +G   A+ VTYN +++ LC  G++D+A+
Sbjct: 401 EPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG--FANTVTYNTILNGLCMAGRVDEAY 458

Query: 361 DLFLDMEAKGV----APDCVAFNTLMLGC 385
            LF  M+ + V     PD V + TL+ G 
Sbjct: 459 KLFNGMKQETVDGVIDPDFVTYTTLLNGA 487



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 178/330 (53%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           G  C   A  Y ++ID   K G+  KA  +   M    + PD  T+N ++  F  A   +
Sbjct: 82  GHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVD 141

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
              +LF EM +Q   PNV+T+S+++D +CK G +E+A ++   M   G RPN F Y +++
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DG   +G V++A  LF  M S G       Y+ LI+G  ++   + A  L+ EMLSKG++
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VT+ +L  GL    +   A ++F E +  G A D   Y   ID LCK+  + EA E+
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  L       D+ +++ L+DGLCKSGR+  A+ L   + R     DV  YN +I  L  
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            G++++A  L L+M++ G  PD V +NTL+
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 180/340 (52%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+  +  G    G ++K+ E L +M+          YNS+I  F  A  + +A  ++  M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+  TF+V+M+   K  +++   +L E M      PN   Y+ L+D  C  G V
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++F+ M+S GC+ N+F+Y+ +I+G  K+  ++ A  L+ EM S+G+  T V YN+L
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    + + A KLF EM   G+  D   + + + GL   G   EA  +F+  R + C
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LD+  Y+ LID LCKS RL  AWE+F  L    L+ DV T+N ++  LC  G++  A  
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  DM+  G  PD   +NTL+ G  ++    +  +LL  M
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM 395



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 37/311 (11%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +QP +  F  +       G +E++ + L+ M        A  YN+L+D F   G   +A 
Sbjct: 52  LQPRI--FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            ++  M   G + + +++++L+N + K K ++    L+ EM ++   P V+TY+ L   +
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   VE+A K+F +M+  G   + + Y + IDGL K+G++ +A  LF  +         
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 306 RSYSCLIDGLCKSGRLKIAWELFH---------------SLPRGVLIA------------ 338
             Y+ LI GL +SGR   A +LF                SL  G+ +A            
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289

Query: 339 --------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                   DV  YN++I  LC   ++D+A ++F ++E  G+ PD   FN LM G  ++  
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349

Query: 391 TSKVVELLHRM 401
                 LL  M
Sbjct: 350 IHDAFILLGDM 360



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++++ G EP+V+TY+TLI+  C+ G    AL LFEE I+  G        + V
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEE-ISAKG------FANTV 439

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK----DKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            Y TI++GLC  G VD+A +L   MK    D  I+PD VTY +++ G   A  S  A  L
Sbjct: 440 TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 274 RTFID---GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           R FI+   G    G + +++E  + +   +C L   +Y+ LID   K+G  + A  ++  
Sbjct: 55  RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L  D  T+N++++A     ++D    LF +M+ +  +P+ + ++ L+    +   
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174

Query: 391 TSKVVELLHRMDER 404
             K +++   M  R
Sbjct: 175 VEKALKVFLDMKSR 188


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 213/397 (53%), Gaps = 7/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++   ++  GC PNV+TY+TL+    R G    A  L   M++G        KP+ V
Sbjct: 168 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG------LKPNLV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++G+CK G ++ A+++  +M  + + PD V+YN+++ G+C A  S+EA  +F EM
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++  +CK G +E A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M     K +V  Y+ LINGYC    ++ A  L  EM +KG+KP VVTY+T+
Sbjct: 342 DDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +      AF+L  +M   GV  D   Y + I  LC+   + +A  LF+ +  L  
Sbjct: 402 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGL 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A  
Sbjct: 462 QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   P    ++ LM  C R  E   V+ LL
Sbjct: 522 LLFKLYHEEPIPANTKYDALM-HCCRKAELKSVLALL 557



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 218/438 (49%), Gaps = 59/438 (13%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +PN++T+++++NG+C+ G    A  +F+EM+           PD V Y T++ G CK 
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG------LAPDGVSYNTLVGGYCKA 268

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  +  +M  K I PDVVT+ S+I   C A +   A  L  +M ++G+Q N VTF
Sbjct: 269 GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTF 328

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK G +++A   +  M Q  ++P+   YN L++G+C+ GR++ A+EL   ME+
Sbjct: 329 TALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 388

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K +V +YS +I+ YCKN +   A  L  +ML KG+ P  +TY++L   L E  ++  
Sbjct: 389 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF  M + G+  D + Y + IDG CK G +  AL L   +       D+ +YS LI+
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508

Query: 314 GLCKSGRL----KIAWELFHSLP-------------------RGVLI------------- 337
           GL KS R     ++ ++L+H  P                   + VL              
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568

Query: 338 ADVV--------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           AD V               Y+++IH  C  G + KA      M  +G AP+  +  +L+ 
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628

Query: 384 GCIRNN---ETSKVVELL 398
           G   N    E  +V++ L
Sbjct: 629 GLFENGMVVEADQVIQQL 646



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 200/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F  + + G  PNV TY+ LI  LC  GH   AL++  +M       G  C P+ V
Sbjct: 133 SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDM------RGAGCGPNVV 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++    + G VD A+ L+  M D  + P++VT+NS++ G C A    +A+++F EM
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+ V+++ ++   CK G   EA  +   M Q G+ P+   + +L+   C  G +
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G + N  +++ LI+G+CK   ++ AL     M    IKP+VV YN L
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A +L  EM+  G+  D   Y T I   CKN     A EL + +     
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS LI  LC+  RL  A  LF ++ +  L  D  TY  +I   C +G +++A  
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALS 486

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   GV PD V ++ L+ G  ++    +  +LL ++
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 170/312 (54%), Gaps = 1/312 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V+ YN+V+     A+ ++ A+R F  M+  GV PNV T+++++  LC  G  +EA  +
Sbjct: 114 PSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  PN   YNTL+  F   G V+ A+ L   M   G K N+ +++ ++NG CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E A  ++ EM+ +G+ P  V+YNTL  G  +      A  +F EM + G+  D   
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + + I  +CK G +  A+ L R +R    +++  +++ LIDG CK G L  A      + 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +   VV YN +I+  C  G+MD+A +L  +MEAKG+ PD V ++T++    +N +T 
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 393 KVVELLHRMDER 404
              EL  +M E+
Sbjct: 413 SAFELNQQMLEK 424



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 56/385 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +++  G + N +T++ LI+G C+ G       L + ++   G      KP  V 
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGF------LDDALLAVRGMRQCRIKPSVVC 362

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+G C  G +D+A+ELL +M+ K + PDVVTY+++I  +C   D++ A  L  +M+
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV P+ +T+S ++  LC+  ++ +A  L + MI++G++P+ F Y +L+DG C  G V 
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGY-------------------------------- 210
           RA  L   M   G   +V +YS+LING                                 
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 211 --CKNKEIEGALSL----------------YSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             C+  E++  L+L                Y  ML +        Y+ L  G      V 
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           +A     +M + G A ++ +  + I GL +NG +VEA ++ + L       D  +   LI
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLI 337
           D     G +    ++ H + +  L+
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLL 687



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 21/292 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++A G +P+V+TYST+I+  C+   T  A  L ++M+    E GV+  PDA+
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML----EKGVL--PDAI 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I  LC+E  +  A  L   M    + PD  TY S+I G C   +   A  L  +M
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKM 491

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM--------- 172
           +  GV P+VVT+SV+++ L K+ +  EA QLL  +      P    Y+ LM         
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELK 551

Query: 173 ------DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G +N A +++ SM       +   YS+LI+G+C+   +  ALS + +M
Sbjct: 552 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 611

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L +G  P   +  +L  GLFE   V  A ++  ++      AD  A +  ID
Sbjct: 612 LQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALID 663



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 44/207 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF-----EEMINGNGEFGVV- 55
            A +L  K+   G  P+V+TYS LINGL ++   + A  L      EE I  N ++  + 
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 56  --CKP------------------------------------DAVIYTTIIDGLCKEGFVD 77
             C+                                     D  +Y+ +I G C+ G V 
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA     QM  +   P+  +  S+IRG        EA ++  ++++     +      ++
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPN 164
           D     G ++    +L  M + G+ P+
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 221/438 (50%), Gaps = 43/438 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +   ++   G +P+V  Y++LING C+ G    A +L  EMIN   E      P  V 
Sbjct: 421 ALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE------PTVVT 474

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT+++ G C +G ++KA  L  +M  K I P + T+ +++ G   A    +A +LF EM 
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA 534

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V+PN VT++V+++  C+ G M +A + L  MI+ G+ P+ + Y  L+ G CLTG+ +
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS--------------------- 221
            AK     +    C+ N   Y+ L++G+C+  ++E ALS                     
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654

Query: 222 --------------LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                         L  EM  +G+KP  V Y ++     +    + AF ++D M   G  
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS-GRLKIAWE 326
            +   Y   I+GLCK G++ EA  L   +R      +  +Y C +D L K  G +K A E
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE 774

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L +++ +G L+A+  TYN++I   C  G+M++A +L   M   GV+PDC+ + T++    
Sbjct: 775 LHNAILKG-LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833

Query: 387 RNNETSKVVELLHRMDER 404
           R N+  K +EL + M E+
Sbjct: 834 RRNDVKKAIELWNSMTEK 851



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L     +P+V+TY TL+ GLC+     V L + +EM+       +   P   
Sbjct: 280 EAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR------LRFSPSEA 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +++++GL K G V++A  L+ ++ +  ++P++  YN++I   C   + +EA+ LF  M
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN VT+S+++D  C+ GK++ A   L  MI +G++P+ + YN+L++G C  G +
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L   M +   +  V +Y+ L+ GYC   +I  AL LY EM  KGI P++ T+ TL
Sbjct: 454 SAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTL 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF    +  A KLF EM    V  +   Y   I+G C+ G + +A E    +     
Sbjct: 514 LSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY  LI GLC +G+   A      L +G    + + Y  ++H  C +GK+++A  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  DM  +GV  D V +  L+ G +++ +    + LL  M +R
Sbjct: 634 VCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 209/422 (49%), Gaps = 44/422 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P V T S L++GL +  H  +A+ LF++MIN      V  +PD  IYT +I  LC+   +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMIN------VGIRPDVYIYTGVIRSLCELKDL 243

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +AKE+++QM+    + ++V YN +I G C      EA  +  ++  + ++P+VVT+  +
Sbjct: 244 SRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTL 303

Query: 137 MDELC-----------------------------------KNGKMEEASQLLELMIQIGV 161
           +  LC                                   K GK+EEA  L++ + + GV
Sbjct: 304 VCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGV 363

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            PN FVYN L+D  C     + A+ LF  M  +G   N  +YSILI+ +C+  +++ ALS
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALS 423

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
              EM+  G+KP+V  YN+L  G  +   +  A  L  EM    +      Y + + G C
Sbjct: 424 FLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYC 483

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
             G I +AL L+  +        I +++ L+ GL ++G ++ A +LF  +    +  + V
Sbjct: 484 SKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRV 543

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV---VELL 398
           TYN+MI   C +G M KA +   +M  KG+ PD  ++  L+ G     + S+    V+ L
Sbjct: 544 TYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603

Query: 399 HR 400
           H+
Sbjct: 604 HK 605



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 185/383 (48%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  FG  PN+  Y+ LI+ LC+  +   A  LF+ M    G+ G+   P+ V
Sbjct: 350 EALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM----GKIGLC--PNDV 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID  C+ G +D A   L +M D  + P V  YNS+I G C   D + A+ L  EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM 463

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P VVT++ +M   C  GK+ +A +L   M   G+ P+ + + TL+ G    G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLI 523

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M     K N  +Y+++I GYC+   +  A    +EM+ KGI P   +Y  L
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    Q   A    D + +     +   Y   + G C+ G + EAL + + + +   
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+  Y  LIDG  K    K+   L   +    L  D V Y  MI A    G   +A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M  +G  P+ V +  ++ G
Sbjct: 704 IWDLMINEGCVPNEVTYTAVING 726



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 207/429 (48%), Gaps = 49/429 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++   G  P++ T++TL++GL R G    A+ LF EM   N       KP+ V
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN------VKPNRV 543

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C+EG + KA E L +M +K I PD  +Y  +I G C    ++EAK +F++ 
Sbjct: 544 TYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQ----------------------------- 151
           + +G  + N + ++ ++   C+ GK+EEA                               
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 152 ------LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                 LL+ M   G++P+  +Y +++D    TG    A  ++  M + GC  N  +Y+ 
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE-IHQVERAFKLFDEMQRH 264
           +ING CK   +  A  L S+M      P  VTY      L + +  +++A +L + + + 
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK- 781

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+ A+T  Y   I G C+ G + EA EL   +       D  +Y+ +I  LC+   +K A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            EL++S+    +  D V YN +IH  C  G+M KA +L  +M  +G+ P+     T    
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSET---- 897

Query: 385 CIRNNETSK 393
            I N+ +SK
Sbjct: 898 TISNDSSSK 906



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 159/348 (45%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+    + ++ GL K      A EL   M +  I PDV  Y  VIR  C   D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            ++M   G   N+V ++V++D LCK  K+ EA  + + +    ++P+   Y TL+ G C 
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                   E+   M  +    +  + S L+ G  K  ++E AL+L   +   G+ P +  
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L   L +    + A  LFD M + G+  +   Y   ID  C+ G +  AL     + 
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  +  +  Y+ LI+G CK G +  A  L   +    L   VVTY  ++   C+ GK++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           KA  L+ +M  KG+ P    F TL+ G  R       V+L   M E N
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 53/262 (20%)

Query: 195 GCKHNVFSYSILING--------------------------------------------- 209
           G  H+  S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSS 158

Query: 210 -------YCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
                  Y +++ +   + ++  M++K  + P V T + L  GL +      A +LFD+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  D + Y   I  LC+   +  A E+   +    C+++I  Y+ LIDGLCK  ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  +   L    L  DVVTY  ++  LC   + +   ++  +M     +P   A ++L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G  +  +  + + L+ R+ E
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAE 360


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 210/401 (52%), Gaps = 11/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P+V T++T+I G CR    +    L + MI           P+ +
Sbjct: 263 EALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG------FTPNDM 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR-LFIE 120
            Y  ++ GLCK   +D+A+ LL     K   P+VV +N+++ GF      NEA   ++ +
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDK 372

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+V TFS +++ LCK G    A +L+  M   G +PN   Y  L+DGFC  G+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +   M + G   N   Y+ LI+  CK+ +I  AL ++ EM SKG KP + T+N+
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL  + ++E A  L+ +M   GV A++  + T I    + G I EAL+L   +    
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +Y+ LI  LCK+G ++    LF  + R  L   ++T NI+I+  C  GK+  A 
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   DM  +G +PD V +N+L+ G  +     + + L  ++
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653



 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 211/404 (52%), Gaps = 17/404 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E A L  ++   G  PN +TY  L++GLC+T     A  L  +          V  P+ 
Sbjct: 297 LEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK----------VPGPNV 346

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN----PDVVTYNSVIRGFCYANDSNEAKR 116
           V + T+++G  + G +++A   +    DK IN    PDV T+++++ G C       A  
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVY---DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M  +G +PN+ T+++++D  CK G++EEA  +L  M+  G   N   YN L+   C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+++ A ++F  M S GCK ++F+++ LI G C+  E+E AL+LY +M+ +G+    V
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+NTL        +++ A KL ++M   G   D   Y   I  LCK G + + L LF  +
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                   I + + LI+G C +G++  A E    +       D+VTYN +I+ LC  G++
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +A +LF  ++A+G+ PD + +NTL+    R         LL+R
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYR 687



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 196/382 (51%), Gaps = 11/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-LFEEMINGNGEFGVVCKPDA 60
           EA AL +K+      PNV+ ++TL+NG  R G    A   ++++MIN NG       PD 
Sbjct: 333 EAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN-NGYV-----PDV 382

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             ++T+++GLCK+G    A EL+  M  K   P++ TY  +I GFC      EA  +  E
Sbjct: 383 FTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILRE 442

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G   N V ++ ++  LCK+GK+ EA  +   M   G +P+ F +N+L+ G C    
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  L+  M   G   N  +++ LI+ + +  EI+ AL L ++ML +G     +TYN 
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +   VE+   LF+EM R G+          I+G C  G +  ALE  R +    
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI +Y+ LI+GLCK GR++ A  LF  L    +  D +TYN +I  LC +G  D A 
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L       G  P+ V +N L+
Sbjct: 683 FLLYRGVENGFVPNDVTWNILV 704



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 207/404 (51%), Gaps = 13/404 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GC PN + Y TLI+ L +      AL L EEM      F + C PD   
Sbjct: 229 ACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEM------FLMGCPPDVNT 282

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+I G C+   V +  +L+ +M  K   P+ +TY  ++ G C     +EA+ L    +
Sbjct: 283 FNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL----L 338

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +   PNVV F+ +++   +NG++ EA+  + + MI  G  P+ F ++TL++G C  G  
Sbjct: 339 SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLF 398

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M++ GCK N+ +Y+ILI+G+CK  ++E A  +  EML+KG     V YN L
Sbjct: 399 GSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNAL 458

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++  A  +F EM   G   D + + + I GLC+   + +AL L+R + +   
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +++ LI    + G ++ A +L +  L RG  + D +TYN +I ALC  G ++K  
Sbjct: 519 IANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL-DEITYNGLIKALCKTGAVEKGL 577

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF +M  KG+ P  +  N L+ G     +    +E +  M  R
Sbjct: 578 GLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR 621



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 184/346 (53%), Gaps = 6/346 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A ++ K+   G  P+V T+STL+NGLC+ G    AL L  +M +  G     CKP+   
Sbjct: 366 TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM-DAKG-----CKPNLNT 419

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG CK+G +++A  +L +M  K  + + V YN++I   C     +EA  +F EM 
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++ TF+ ++  LC+  +ME+A  L   M+  GV  N+  +NTL+  F   G + 
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M   GC  +  +Y+ LI   CK   +E  L L+ EM+ KG+ P+++T N L 
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +V  A +   +M   G + D   Y + I+GLCK G I EAL LF  L+    +
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQ 659

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
            D  +Y+ LI  LC+ G    A  L +       + + VT+NI+++
Sbjct: 660 PDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY 705



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 180/374 (48%), Gaps = 35/374 (9%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI-NPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++  I+    + G   +A  LLL MK      P   +YN V+      N  + A  +F +
Sbjct: 141 LFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYD 200

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV PN  TF ++M  LC   +++ A  LL  M + G  PN+ +Y TL+D      R
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYN 239
           V+ A +L   M  MGC  +V +++ +I G+C+ N+ +EGA  L   M+ KG  P  +TY 
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA-KLVDRMILKGFTPNDMTYG 319

Query: 240 TLFIGLFEIHQVERAFKL--------------------------------FDEMQRHGVA 267
            L  GL +  +++ A  L                                +D+M  +G  
Sbjct: 320 YLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D + + T ++GLCK G    ALEL   +    C+ ++ +Y+ LIDG CK G+L+ A  +
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +       + V YN +I ALC  GK+ +A D+F +M +KG  PD   FN+L+ G  R
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 388 NNETSKVVELLHRM 401
            +E    + L   M
Sbjct: 500 VDEMEDALALYRDM 513



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 29/253 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVV- 55
           EA  +F ++ + GC+P++ T+++LI GLCR      AL L+ +M     I  +  F  + 
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C  D + Y  +I  LCK G V+K   L  +M  K + 
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++T N +I GFC A   + A     +M+ +G  P++VT++ +++ LCK G+++EA  L
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNL 649

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E +   G++P++  YNTL+   C  G  + A  L       G   N  +++IL+  + K
Sbjct: 650 FEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709

Query: 213 NKEIEGALSLYSE 225
               EG    Y++
Sbjct: 710 QSNSEGQTITYAQ 722


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 210/367 (57%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL  F  M++ N +      P  + +  ++  + +    +    L  +M+ + I  +V T
Sbjct: 24  ALASFNRMLDRNPQ------PPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCT 77

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            + +I  FC+ +  +    +F + + +G +P+VV F+ ++D +C+ GK E A+ LL+ M 
Sbjct: 78  LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G  P+    N+LM G+C  G++++ +++F  M S G K +V+SYSI INGYCK ++I+
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ L+ EM  +G+ P  VTYNTL   L +  +   A  LF +M   G++ D  AY T +
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           DG CK G + E L LF+ ++    + D+  Y+ +I+G+C+S ++K A E+   L    L 
Sbjct: 258 DGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLK 317

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DV TY  ++  LC +G + +A  LF  ME  G  P   ++N L+ GC+++N+TS VV+L
Sbjct: 318 PDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQL 377

Query: 398 LHRMDER 404
           +H M +R
Sbjct: 378 IHEMADR 384



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 181/342 (52%), Gaps = 6/342 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF +++  G + NV T S LIN  C   H     ++F + +          KPD VI+T
Sbjct: 61  SLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRG------FKPDVVIFT 114

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDG+C+ G  + A  LL +M      PDVVT NS++RG+C     ++ +++F  M+ +
Sbjct: 115 TLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSK 174

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+V ++S+ ++  CK  K++EA +L + M   GV PNA  YNTL+   C   R   A
Sbjct: 175 GLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDA 234

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + LF  M + G   ++ +YS L++G+CK   ++  L L+ EM  + +KP +V Y  +  G
Sbjct: 235 QVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIING 294

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           +    +V+ A ++   +   G+  D   Y   +DGLC+ G I+EAL LFR +    C   
Sbjct: 295 MCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPG 354

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             SY+ L+ G  +        +L H +      AD VT   +
Sbjct: 355 SCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 125/261 (47%)

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           G +++A      M+    +P    +N L+       +      LF  ME  G K+NV + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           SILIN +C    ++   S++ + L +G KP VV + TL  G+  I + E A  L  EM  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G   D     + + G C  G I +  ++F  +     + D+ SYS  I+G CK  ++  
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A ELF  +    ++ + VTYN +I ALC   +   A  LF  M A G++PD +A++TL+ 
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 384 GCIRNNETSKVVELLHRMDER 404
           G  +     +++ L   M  R
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRR 279


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 225/472 (47%), Gaps = 77/472 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL---------------FEEMI 46
           +A+A+F ++    C+P+  T++ L+ GLCR+     A  L               +  +I
Sbjct: 25  KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALI 84

Query: 47  NGNG---EFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +G     +FG             C P  V YT I+DGLCK      A +LL +M+DK  +
Sbjct: 85  SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++ TYN ++ G C     +EAK++  EM  +G  P+VVT++  +  LCK  +++EA + 
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M    V P+   Y T+++G C +G ++ A  +   M + GC  +V +YS LI+G+CK
Sbjct: 205 LARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E+E A+ L   ML  G +P +V YN+L   L  +  + +A  +  EM+R G   D  +
Sbjct: 262 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCE----------LDIRSYSCLIDGLCKSGRLK 322
           Y   IDGLCK   + +A  +F  +    C           +DI  Y+ L+DGLCK GR  
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381

Query: 323 IAWELF----------------------HSLPRGVLIA-------------DVVTYNIMI 347
            A  LF                      H   R +  A             +VVT+NI++
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILV 441

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           H LC D ++  A  + L M  +G  PD V + TL+    +  +++  +EL  
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 219/436 (50%), Gaps = 49/436 (11%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G E NV TY+ L+  L R      A  +F+EMI+ +      C+PDA  +  ++ GLC+
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKS------CQPDAFTFAILLRGLCR 54

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              ++KA++LL +MK+    PD   YN++I G+  A D  +A +   EM+     P VVT
Sbjct: 55  SNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT 114

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ I+D LCK  +  +A +LL+ M   G  PN + YN +++G C   +++ AK++   M 
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 193 SMG---------------CK-----------------HNVFSYSILINGYCKNKEIEGAL 220
             G               CK                  +V SY+ +ING CK+ +++ A 
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSAS 234

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +   M ++G  P VVTY++L  G  +  +VERA  L D M + G   +  AY + +  L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRG----- 334
            + G+I +A ++   +       D+ SY+  IDGLCK+ R+K A  +F  +  RG     
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 335 ----VLIADVVTYNIMIHALCADGKMDKAHDLFLD-MEAKGVAPDCVAFNTLMLGCIRNN 389
               +LI D++ Y +++  LC  G+ D+A  LF   ++ K   PD   +N ++    +  
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 390 ETSKVVELLHRMDERN 405
           +  K +++  +M E+N
Sbjct: 415 QIDKALQIHKQMLEKN 430



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 185/361 (51%), Gaps = 20/361 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V++Y+T+INGLC++G    A  + + M N        C PD V Y+++IDG CK G V
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG------CTPDVVTYSSLIDGFCKGGEV 265

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  LL  M      P++V YNS++          +A+ + +EM  +G  P+VV+++  
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNA----------FVYNTLMDGFCLTGRVNRAKE 186
           +D LCK  ++++A  + + M++ G  PNA           +Y  L+DG C  GR + A  
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACA 385

Query: 187 LFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           LF   ++   C+ +VF Y+++++ +CK ++I+ AL ++ +ML K     VVT+N L  GL
Sbjct: 386 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGL 444

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++  A  +   M   G   D   Y T +D +CK G    ALELF       C  D+
Sbjct: 445 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 504

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH--DLF 363
            +YS LI GL      + A+ LF  L     + D  T  ++   L    K  KA   DL+
Sbjct: 505 VTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAEVVDLY 564

Query: 364 L 364
           L
Sbjct: 565 L 565



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 134/264 (50%), Gaps = 18/264 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA- 60
           +A  +  +++  G  P+V++Y+  I+GLC+      A  +F+ M+    E G  C P+A 
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV----ERG--CTPNAS 355

Query: 61  ---------VIYTTIIDGLCKEGFVDKAKELLLQMKDKNI-NPDVVTYNSVIRGFCYAND 110
                    ++YT ++DGLCK G  D+A  L  ++ D+ I  PDV  YN ++   C    
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            ++A ++  +M+++    NVVT+++++  LC + ++ +A  +L  M+  G  P+   Y T
Sbjct: 416 IDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+D  C  G+   A ELF      GC  +V +YS LI G       E A  L+++++ + 
Sbjct: 475 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERR 534

Query: 231 IKPTVVTYNTLFIGLFEIHQVERA 254
             P   T   L   L  +++  +A
Sbjct: 535 WVPDDKTLGLLHRKLKLLNKPRKA 558


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 213/404 (52%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+K  GC PN+ T++ LI+GL R G   +A+ L+ +M+      G+V  P  V
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTV 378

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ LC EG  + A  +   M      P   TYN +I+ FC   D  +A  +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+T++ ++   CK G +  A +LLE+M   G++P+A+ Y  L+ GF   G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ +I+GY    +++ AL+L+ +M+  G  P+  TYN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + + +  A     +M + G+  +   Y +FIDGLC+NG    A ++F  +     
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA---DVVTYNIMIHALCADGKMDK 358
             ++ +YS LI GLC+ GR + A E+++ L R        +V TY  ++  LC +G+  +
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           A  L + M+ KG+ P    +  L++G  +N +    + + + MD
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 202/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + + +  +   PN  TY++LI G CR  +  +A  +F+ M+         C P++V
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSV 273

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG +++A ++L +M  K I P V TY   +   C A  S+EA  L  +M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+ TF+ ++  L ++GK E A  L   M+  G+ P    YN L++  C+ GR 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M S G   +  +Y+ +I  +C   +I+ A+ ++ +ML  G  P V+TYNTL
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A +L + M+ +G+  D W Y   I G  + G +  A  LF  +     
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ +IDG     ++  A  LF  +     +    TYN+MI        + +A +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               M  +G+ P+ + + + + G  RN  T    ++ H M++RN
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 194/383 (50%), Gaps = 6/383 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           +++TL+  L +     +A +++ +M+N     G+  +P  + + T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            ++  +   +  P+  TY S+I G C  ++ + A  +F  M+  G  PN VT+S +++ L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G++EEA  +LE M+Q G+ P  + Y   +   C  G  + A EL   M+  GC  N+
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G  ++ + E A+ LY +ML+ G+ PT VTYN L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M  HG    T  Y   I   C  G I +A+ +F  +       ++ +Y+ LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L  A  L   +    L  D  TY  +I      GK++ A  LF  M   G++P+ V +  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           ++ G     +    + L  +M E
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVE 545



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 187/370 (50%), Gaps = 8/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+   G  PNVITY+TLI G C+ G+   A+ L E ++ GNG      KPDA 
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE-IMKGNG-----LKPDAW 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G  + G ++ A  L   M +  I+P+ VTY ++I G+      ++A  LF +M
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  T++V++    K   + EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA--LSLYSEMLSKGIKPTVVTYN 239
             A ++F  ME      N+++YS LI G C+    E A   +L + +   G +P V TY 
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYT 663

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  GL    +   A +L   MQ+ G+      YR  + G CKN  +  AL +F ++  L
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +L +  Y  LI  LCK   ++ A  +F ++      +D V + +++  L  +G+ D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLC 783

Query: 360 HDLFLDMEAK 369
             L   ME++
Sbjct: 784 LKLLHVMESR 793



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 179 GRVNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           G V R  +    + S     + + S++ L+    K   ++ A  +Y +ML+ GI+P+++T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +NT+   L +  +V+ A  +   + R+    + + Y + I G C+N  +  A  +F  + 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C+ +  +YS LI+GLC  GRL+ A ++   + +  +   V TY I + +LC  G   
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A +L   M+ +G  P+   F  L+ G  R+ +    + L H+M
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 114/223 (51%), Gaps = 6/223 (2%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNK-EIEGALSLYSEMLSK-GIKPTVVTYNTL 241
           FVSM +   +  +F+ +    IL+   C+N+ E++      SE+ SK     T+ ++ TL
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTL 173

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            I L +   V+ A  ++ +M   G+      + T I+ LCK G + EA  +   +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI G C++  L +A+ +F  + +     + VTY+ +I+ LC++G++++A D
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +M  KG+ P    +   ++       +S+ VELL +M +R
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR 336


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 213/404 (52%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+K  GC PN+ T++ LI+GL R G   +A+ L+ +M+      G+V  P  V
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTV 378

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ LC EG  + A  +   M      P   TYN +I+ FC   D  +A  +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+T++ ++   CK G +  A +LLE+M   G++P+A+ Y  L+ GF   G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ +I+GY    +++ AL+L+ +M+  G  P+  TYN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + + +  A     +M + G+  +   Y +FIDGLC+NG    A ++F  +     
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA---DVVTYNIMIHALCADGKMDK 358
             ++ +YS LI GLC+ GR + A E+++ L R        +V TY  ++  LC +G+  +
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           A  L + M+ KG+ P    +  L++G  +N +    + + + MD
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 202/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + + +  +   PN  TY++LI G CR  +  +A  +F+ M+         C P++V
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSV 273

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG +++A ++L +M  K I P V TY   +   C A  S+EA  L  +M
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+ TF+ ++  L ++GK E A  L   M+  G+ P    YN L++  C+ GR 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M S G   +  +Y+ +I  +C   +I+ A+ ++ +ML  G  P V+TYNTL
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A +L + M+ +G+  D W Y   I G  + G +  A  LF  +     
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ +IDG     ++  A  LF  +     +    TYN+MI        + +A +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               M  +G+ P+ + + + + G  RN  T    ++ H M++RN
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 194/383 (50%), Gaps = 6/383 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           +++TL+  L +     +A +++ +M+N     G+  +P  + + T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            ++  +   +  P+  TY S+I G C  ++ + A  +F  M+  G  PN VT+S +++ L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G++EEA  +LE M+Q G+ P  + Y   +   C  G  + A EL   M+  GC  N+
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G  ++ + E A+ LY +ML+ G+ PT VTYN L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M  HG    T  Y   I   C  G I +A+ +F  +       ++ +Y+ LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L  A  L   +    L  D  TY  +I      GK++ A  LF  M   G++P+ V +  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           ++ G     +    + L  +M E
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVE 545



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 187/370 (50%), Gaps = 8/370 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+   G  PNVITY+TLI G C+ G+   A+ L E ++ GNG      KPDA 
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLE-IMKGNG-----LKPDAW 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G  + G ++ A  L   M +  I+P+ VTY ++I G+      ++A  LF +M
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  T++V++    K   + EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA--LSLYSEMLSKGIKPTVVTYN 239
             A ++F  ME      N+++YS LI G C+    E A   +L + +   G +P V TY 
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYT 663

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  GL    +   A +L   MQ+ G+      YR  + G CKN  +  AL +F ++  L
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +L +  Y  LI  LCK   ++ A  +F ++      +D V + +++  L  +G+ D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLC 783

Query: 360 HDLFLDMEAK 369
             L   ME++
Sbjct: 784 LKLLHVMESR 793



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 179 GRVNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           G V R  +    + S     + + S++ L+    K   ++ A  +Y +ML+ GI+P+++T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +NT+   L +  +V+ A  +   + R+    + + Y + I G C+N  +  A  +F  + 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C+ +  +YS LI+GLC  GRL+ A ++   + +  +   V TY I + +LC  G   
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A +L   M+ +G  P+   F  L+ G  R+ +    + L H+M
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 114/223 (51%), Gaps = 6/223 (2%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNK-EIEGALSLYSEMLSK-GIKPTVVTYNTL 241
           FVSM +   +  +F+ +    IL+   C+N+ E++      SE+ SK     T+ ++ TL
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTL 173

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            I L +   V+ A  ++ +M   G+      + T I+ LCK G + EA  +   +     
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI G C++  L +A+ +F  + +     + VTY+ +I+ LC++G++++A D
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +M  KG+ P    +   ++       +S+ VELL +M +R
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKR 336


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 211/397 (53%), Gaps = 7/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++   ++  GC PNV+TY+TL+    R G    A  L   M  G        KP+ V
Sbjct: 208 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG------LKPNLV 261

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++++G+CK G ++ A+++  +M  + + PD V+YN+++ G+C A  S+EA  +F EM
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVTF+ ++  +CK G +E A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M+    K +V  Y+ LINGYC    ++ A  L  EM +KG+KP VVTY+T+
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +      AF+L  +M   GV  D   Y + I  LC    + +A  LF+ +  L  
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A  
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L   +  +   P    ++ LM  C R  E   V+ LL
Sbjct: 562 LLFKLYHEDPIPANTKYDALM-HCCRKAELKSVLALL 597



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 200/400 (50%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F  + + G  PNV TY+ L+  LC  GH   AL++  +M       G  C P+ V
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDM------RGAGCGPNVV 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++    + G VD A+ L+  M++  + P++VT+NS++ G C A    +A+++F EM
Sbjct: 227 TYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ V+++ ++   CK G   EA  +   M Q G+ P+   + +L+   C  G +
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  L   M   G + N  +++ LI+G+CK   ++ AL     M    IKP+VV YN L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A +L  EM+  G+  D   Y T I   CKN     A EL + +     
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS LI  LC   RL  A  LF ++ +  L  D  TY  +I   C +G ++ A  
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   GV PD V ++ L+ G  ++    +  +LL ++
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 214/415 (51%), Gaps = 21/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F ++   G  P+V+T+++LI+ +C+ G+   A+ L  +M     E G+  + + V
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM----RERGL--QMNEV 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDG CK+GF+D A   +  MK   I P VV YN++I G+C     +EA+ L  EM
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+VVT+S I+   CKN     A +L + M++ GV P+A  Y++L+   C   R+
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ +M+  G+ P VVTY+ L
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546

Query: 242 FIGLFEIHQVERA----FKLF-----------DEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             GL +  +   A    FKL+           D +      A+  +    + G C  G +
Sbjct: 547 INGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLM 606

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA ++++++      LD   YS LI G C++G +  A      + +G    +  +   +
Sbjct: 607 NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISL 666

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I  L  +G + +A  +   +       D  A   L+   +       V+++LH M
Sbjct: 667 IRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 721



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 170/312 (54%), Gaps = 1/312 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V+ YN+V+     A+ ++ A+R F  M+  GV PNV T+++++  LC  G  +EA  +
Sbjct: 154 PSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  PN   YNTL+  F   G V+ A+ L   M   G K N+ +++ ++NG CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E A  ++ EM+ +G+ P  V+YNTL  G  +      A  +F EM + G+  D   
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + + I  +CK G +  A+ L R +R    +++  +++ LIDG CK G L  A      + 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +   VV YN +I+  C  G+MD+A +L  +MEAKG+ PD V ++T++    +N +T 
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 393 KVVELLHRMDER 404
              EL  +M E+
Sbjct: 453 SAFELNQQMLEK 464



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 173/325 (53%), Gaps = 1/325 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  + Y  ++  L  +  +  A+     M    + P+V TYN ++R  C      EA  +
Sbjct: 154 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   G  PNVVT++ ++    + G+++ A +L+ +M + G++PN   +N++++G C 
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++  A+++F  M   G   +  SY+ L+ GYCK      ALS+++EM  KGI P VVT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           + +L   + +   +ERA  L  +M+  G+  +   +   IDG CK G++ +AL   R ++
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +  +  Y+ LI+G C  GR+  A EL H +    L  DVVTY+ +I A C +    
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +L   M  KGV PD + +++L+
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLI 477



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 197/388 (50%), Gaps = 7/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+ Y+ ++  L     T  A   F+ M++     GV   P+   Y  ++  LC  
Sbjct: 151 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSD----GVA--PNVYTYNILVRALCGR 203

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  +L  M+     P+VVTYN+++  F  A + + A+RL   M + G++PN+VTF
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF 263

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++ +CK GKME+A ++ + M++ G+ P+   YNTL+ G+C  G  + A  +F  M  
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V +++ LI+  CK   +E A++L  +M  +G++   VT+  L  G  +   ++ 
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A      M++  +      Y   I+G C  G + EA EL   +     + D+ +YS +I 
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 443

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+     A+EL   +    ++ D +TY+ +I  LC + ++  AH LF +M   G+ P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   + +L+ G  +       + L  +M
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKM 531



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 179/387 (46%), Gaps = 58/387 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  +++  G + N +T++ LI+G C+ G       L + ++   G      KP  V
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF------LDDALLAVRGMKQCRIKPSVV 401

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C  G +D+A+ELL +M+ K + PDVVTY+++I  +C   D++ A  L  +M
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 461

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV P+ +T+S ++  LC   ++ +A  L + MI++G++P+ F Y +L+DG C  G V
Sbjct: 462 LEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNV 521

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
             A  L   M   G   +V +YS+LING                                
Sbjct: 522 ESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDAL 581

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              C+  E++  L+L                Y  ML +        Y+ L  G      V
Sbjct: 582 MHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 641

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSC 310
            +A     +M + G A ++ +  + I GL +NG +VEA ++ + L +  C L D  +   
Sbjct: 642 MKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL-LNYCSLADAEASKA 700

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLI 337
           LID     G +    ++ H + +  L+
Sbjct: 701 LIDLNLNEGNVDAVLDVLHGMAKDGLL 727



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 44/207 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF-----EEMINGNGEFGVV- 55
            A +L  K+   G  P+V+TYS LINGL ++   + A  L      E+ I  N ++  + 
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582

Query: 56  --CKP------------------------------------DAVIYTTIIDGLCKEGFVD 77
             C+                                     D  +Y+ +I G C+ G V 
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA     QM      P+  +  S+IRG        EA ++  ++++     +      ++
Sbjct: 643 KALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI 702

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPN 164
           D     G ++    +L  M + G+ P+
Sbjct: 703 DLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 204/402 (50%), Gaps = 4/402 (0%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING--NGEFGVVCKPDAVIY 63
           L  K+     +PNV+T+  LIN +C+      AL + E+M  G  +G   V  +PD VIY
Sbjct: 327 LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 386

Query: 64  TTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            T+IDGLCK G   +   L+ +M+  K   PD +TYN +I GFC A +  + K LF EM 
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV PNVVT + ++  +C+ G++  A        + G++ +A  Y  L++ FC      
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 506

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A ELF  M   GC  +   Y  LI+G+ +   +  A  + +E+   GI+P  V YNTL 
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    ++  R F++  EM+  G+  DT  Y T I    KNG +  A ++ R +      
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHD 361
             + +Y  +I+  C +G    A E+F  +     +  + V YNI+I++LC + K+  A  
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  DM+  GV P+   +N +  G     +  KV E + RM E
Sbjct: 687 LMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 16/406 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LFT++   G        ++L+ GL R G+      L E+M+  +       +P+ V +  
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD------IQPNVVTFGI 345

Query: 66  IIDGLCKEGFVDKAKELLLQMK--------DKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           +I+ +CK   VD A E+L +M           ++ PDVV YN++I G C      E   L
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
              M  Q G  P+ +T++ ++D  CK G++E+  +L + M + GV PN    NTL+ G C
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            TGRV+ A   FV  +  G K +  +Y+ LIN +C     E A+ L++EML  G  P  +
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            Y TL  G  +  ++  A  +  E+++ G+  DT  Y T I G C+        E+ + +
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D  +Y+ LI    K+G LK A ++   + +  ++  V TY  +I+A C +G  
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 357 DKAHDLFLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++A ++F DM+A   V P+ V +N L+    +NN+    V L+  M
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 186/371 (50%), Gaps = 6/371 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           +   EP+V+ Y+TLI+GLC+ G     L L E M +  G     C PD + Y  +IDG C
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKG-----CAPDTITYNCLIDGFC 430

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G ++K KEL  +M  + + P+VVT N+++ G C     + A   F+E   +G++ + V
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++ +++  C     E+A +L   M++ G  P+A VY TL+ GF   GR+  A  +   +
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           + +G + +   Y+ LI G+C+  +      +  EM   G+KP  +TYNTL     +   +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-KCELDIRSYSC 310
           + A K+  +M + GV      Y   I+  C NG   EA+E+F+ ++   K   +   Y+ 
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+ LCK+ ++K A  L   +    +  +  TYN +   L  +  ++K  +    M    
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA 730

Query: 371 VAPDCVAFNTL 381
             PD +    L
Sbjct: 731 CNPDYITMEIL 741



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 31/318 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MING-- 48
           LF ++   G  PNV+T +TL+ G+CRTG    A+N F E               +IN   
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 49  ------------NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
                       N      C PDA++Y T+I G  + G +  A  +L ++K   I PD V
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YN++I GFC  N  +    +  EM + G++P+ +T++ ++    KNG ++ A +++  M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKE 215
           I+ GV P    Y  +++ +CL G  N A E+F  M++      N   Y+ILIN  CKN +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+SL  +M   G+ P   TYN +F GL +   +E+ F+  D M  H    D      
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 276 FIDGLCKNGYIVEALELF 293
             + L   G I E L+ F
Sbjct: 741 LTEWLSAVGEI-ERLKKF 757



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 17/390 (4%)

Query: 29  LCRTGHTIVALNLFEEMINGNGEFGVVCKP-DA---VIYTTIIDGLCKEGFV--DKAKEL 82
           L R+G    AL + +EM   N +    C+P DA   ++++ ++     E  +  D+   L
Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSN--CRPNDATGDILFSFLLKRERNEELLSEDEIVNL 257

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
           +L+  +  +         +I   C    +N    LF EM+  G        + ++  L +
Sbjct: 258 VLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAR 317

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--------SM 194
            G     ++L+E M+++ ++PN   +  L++  C   RV+ A E+   M         S+
Sbjct: 318 EGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISV 377

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVER 253
             + +V  Y+ LI+G CK    +  L L   M S KG  P  +TYN L  G  +  ++E+
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             +LFDEM + GVA +     T + G+C+ G +  A+  F   +    + D  +Y+ LI+
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             C     + A ELF+ + +     D + Y  +I      G+M  A  +  +++  G+ P
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP 557

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V +NTL+ G  R N+  +V E+L  M+E
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEMEE 587



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 26/305 (8%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG----VRPNAFVYNTLMDGFCL 177
           +D  V+ N    +V +  L ++G++++A ++++ M +       RPN    + L   F  
Sbjct: 183 LDPSVK-NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDIL---FSF 238

Query: 178 TGRVNRAKELFVSMESMGC-----KHNVFSYSI----LINGYCKNKEIEGALSLYSEMLS 228
             +  R +EL    E +       +H V   S     LI   C+N++      L++EM+ 
Sbjct: 239 LLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIK 298

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G        N+L  GL       R  +L ++M    +  +   +   I+ +CK   + +
Sbjct: 299 LGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDD 358

Query: 289 ALELFRTLR--------ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIAD 339
           ALE+   +          +  E D+  Y+ LIDGLCK GR +    L   +  +     D
Sbjct: 359 ALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPD 418

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            +TYN +I   C  G+++K  +LF +M  +GVAP+ V  NTL+ G  R    S  V    
Sbjct: 419 TITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFV 478

Query: 400 RMDER 404
               R
Sbjct: 479 EAQRR 483



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 42/227 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ +  +LK  G  P+ + Y+TLI G CRT        + +EM     E G+  KPD +
Sbjct: 542 DASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM----EEAGL--KPDTI 595

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I    K G +  A++++ +M    + P V TY +VI  +C   + NEA  +F +M
Sbjct: 596 TYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM 655

Query: 122 MDQ------------------------------------GVQPNVVTFSVIMDELCKNGK 145
                                                  GV PN  T++ I   L     
Sbjct: 656 KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKD 715

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +E+  + ++ MI+    P+      L +     G + R K+     E
Sbjct: 716 LEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCE 762


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 217/402 (53%), Gaps = 8/402 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++      PNV+TYS L+ GL RTG    A  + ++M       GV  +PD V YT 
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT----ARGV--RPDVVAYTV 295

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           + DGLCK G    A ++L  M  K   P  +TYN V+ G C  +  ++A  +   M+ +G
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +P+ VT++ ++  LC  GK+ EA  L +L++  +  V+P+ F  N L+ G C  GRV+ 
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  +  SM  MG + N+ +Y+ LI GY   +++  AL L+   +  G  P  +TY+ +  
Sbjct: 416 AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL ++  +  A  LF +M+  G+      Y   +  LC+   + +A  LF+ +R +   +
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV 535

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ S++ +IDG  K+G +K A EL   +    L+ D VT++I+I+     G +D+A  L+
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M + G  P  V F++L+ G     ET K++ LLH+M +++
Sbjct: 596 EKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKD 637



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 210/409 (51%), Gaps = 11/409 (2%)

Query: 2   EAAALFTKLKA-FGCE-PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +A +LF+++K  + C  P+ +TY+TL+NG C+      A  LFE M  G       C+P+
Sbjct: 130 KAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGD-----CRPN 184

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y+ +ID  CK G V +   LL +M+ + +  DV  Y+S+I  FC   D    + LF 
Sbjct: 185 LVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFD 244

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ + V PNVVT+S +M  L + G+  EAS++L+ M   GVRP+   Y  L DG C  G
Sbjct: 245 EMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNG 304

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R   A ++   M   G +    +Y++++NG CK   ++ A  +   M+ KG KP  VTYN
Sbjct: 305 RAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYN 364

Query: 240 TLFIGL---FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TL  GL    +IH+    +KL    + H V  D +     I GLCK G + +A  +  ++
Sbjct: 365 TLLKGLCGAGKIHEAMDLWKLLLSEKFH-VKPDVFTCNNLIQGLCKEGRVHDAARIHSSM 423

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  + +I +Y+ LI+G   + +L  A +L+          + +TY++MI+ LC    +
Sbjct: 424 VEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQML 483

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             A  LF  M+  G+ P  + +N LM    R +   +   L   M   N
Sbjct: 484 SVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 153/307 (49%), Gaps = 4/307 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+ +TY+TL+ GLC  G    A++L++ +++   +F V  KPD      +I GLCKE
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE--KFHV--KPDVFTCNNLIQGLCKE 410

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V  A  +   M +  +  ++VTYN +I G+  A    EA +L+   ++ G  PN +T+
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           SV+++ LCK   +  A  L   M   G+RP    YN LM   C    + +A+ LF  M +
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +    +V S++I+I+G  K  +++ A  L SEM    + P  VT++ L     ++  ++ 
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDE 590

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L+++M   G       + + + G    G   + + L   +      LD +  S ++ 
Sbjct: 591 AMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILA 650

Query: 314 GLCKSGR 320
            LC   R
Sbjct: 651 CLCHMSR 657



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 3/285 (1%)

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    P+    S ++D L K  + +    +   M+   V P     + L + F  T   +
Sbjct: 35  DPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPS 94

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPTVVTYNT 240
            A  +   M   G   NV++ ++++ G+C++ + + A+SL+S+M      + P  VTYNT
Sbjct: 95  FAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNT 154

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L  G  +  ++  A  LF+ M++ G    +   Y   ID  CK+G + E L L   +   
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+  YS LI   C  G ++   ELF  + R  +  +VVTY+ ++  L   G+  +A
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++  DM A+GV PD VA+  L  G  +N      +++L  M ++
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 9/252 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+      G  PN +TYS +INGLC+     VA  LF +M +         +P  
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG------IRPTV 502

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++  LC+E  +++A+ L  +M++ N N DVV++N +I G   A D   AK L  E
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSE 562

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    + P+ VTFS++++   K G ++EA  L E M+  G  P   V+++L+ G+ L G 
Sbjct: 563 MFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGE 622

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYC---KNKEIEGALSLYSEMLSKGIKPTVVT 237
             +   L   M       +    S ++   C   +N ++E  L  +S+      K T + 
Sbjct: 623 TEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIK 682

Query: 238 YNTLFIGLFEIH 249
            + L + L   H
Sbjct: 683 CHELLMRLNNFH 694


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 206/409 (50%), Gaps = 41/409 (10%)

Query: 6    LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            L  K+K  G +PN  TY ++I  LCR      A   F EMI G G       PD ++YTT
Sbjct: 726  LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI-GQGIL-----PDTIVYTT 779

Query: 66   IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            ++DG CK G +  A +   +M  ++I PDV+TY ++I GFC   D  EA +LF EM+ +G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 126  VQ-----------------------------------PNVVTFSVIMDELCKNGKMEEAS 150
            ++                                   PNVVT++ ++D LCK G ++ A+
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 151  QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            +LL  M +IG++PN F YN++++G C +G +  A +L    E+ G   +  +Y+ L++ Y
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 211  CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            CK+ E++ A  + +EML KG++PT+VT+N L  G      +E   KL + M   G+A + 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 271  WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
              +   +   C    +  A  +++ +     E D ++Y  L+ G C +  +K AW LF  
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            +        V TY+++I       K  +A ++F  M   G+A D   F+
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 211/384 (54%), Gaps = 7/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRT-GHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +F K+  +G   +V + +  +  L +    T  A+ +F E      E GV    + 
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF----PEVGVCW--NV 669

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I  +C+ G +++A  LLL M+ K   PDV++Y++VI G+C   + ++  +L  +
Sbjct: 670 ASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEK 729

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN  T+  I+  LC+  K+ EA +    MI  G+ P+  VY TL+DGFC  G 
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EML +G++P ++T+  
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I +Y+ +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA 
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  +M  KG+ P  V FN LM G
Sbjct: 970 EILTEMLGKGLQPTIVTFNVLMNG 993



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 206/389 (52%), Gaps = 9/389 (2%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
            A  +F +    G   NV +Y+ +I+ +C+ G    A +L   M + G         PD +
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGY-------TPDVI 705

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y+T+I+G C+ G +DK  +L+ +MK K + P+  TY S+I   C      EA+  F EM
Sbjct: 706  SYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM 765

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + QG+ P+ + ++ ++D  CK G +  AS+    M    + P+   Y  ++ GFC  G +
Sbjct: 766  IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +LF  M   G + ++ +++ L+NGYCK   I+ A  +++ M+  G  P VVTY TL
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTL 885

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              GL +   ++ A +L  EM + G+  + + Y + ++GLCK+G I EA++L         
Sbjct: 886  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              D  +Y+ L+D  CKSG +  A E+   +    L   +VT+N++++  C  G ++    
Sbjct: 946  NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005

Query: 362  LFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            L   M AKG+AP+   FN L+   CIRNN
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 165/297 (55%), Gaps = 6/297 (2%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  LF ++   G EP++IT++ L+NG C+ GH   A  +   MI         C P+ 
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG------CSPNV 879

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V YTT+IDGLCKEG +D A ELL +M    + P++ TYNS++ G C + +  EA +L  E
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                G+  + VT++ +MD  CK+G+M++A ++L  M+  G++P    +N LM+GFCL G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +   ++L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G++P   TY  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
            L  G      ++ A+ LF EM+  G +     Y   I G  K    VEA E+F  +R
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 200/392 (51%), Gaps = 9/392 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTIIDG 69
           K +G +P V  +      L   G    A  +FE+M+N    +G+V   D+  +Y   +  
Sbjct: 592 KDWGSDPRV--FDVFFQVLVEFGMLPEARKVFEKMLN----YGLVLSVDSCNVYLARLSK 645

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C +     A  +  +  +  +  +V +YN VI   C     NEA  L + M  +G  P+
Sbjct: 646 DCNK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPD 703

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+++S +++  C+ G++++  +L+E M Q G++PN++ Y +++   C   ++  A+E F 
Sbjct: 704 VISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS 763

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   +   Y+ L++G+CK  +I  A   + EM S+ I P V+TY  +  G  +I 
Sbjct: 764 EMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 823

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            +  A KLF EM   G+  D   +   ++G CK G+I +A  +   +    C  ++ +Y+
Sbjct: 824 DMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYT 883

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGLCK G L  A EL H + +  L  ++ TYN +++ LC  G +++A  L  + EA 
Sbjct: 884 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 943

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G+  D V + TLM    ++ E  K  E+L  M
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           A  ++ +ML+ G+  +V + N     L  + ++   A  +F E    GV  +  +Y   I
Sbjct: 617 ARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVI 676

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             +C+ G I EA  L   + +     D+ SYS +I+G C+ G L   W+L   + +  L 
Sbjct: 677 HFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK 736

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +  TY  +I  LC   K+ +A + F +M  +G+ PD + + TL+ G  +  +     + 
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796

Query: 398 LHRMDERN 405
            + M  R+
Sbjct: 797 FYEMHSRD 804



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 6/157 (3%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +   L   + A G  PN  T++ L+   C   +   A  ++++M +   E      PD  
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE------PDGK 1055

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++ G C    + +A  L  +MK K  +  V TY+ +I+GF       EA+ +F +M
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
               G+  +   F    D   K  + +     ++ +I+
Sbjct: 1116 RRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 211/396 (53%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G  PNV T++  I  L R G    A  +F  M +        C PD V YT 
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LC  G ++ AKEL ++MK     PD V Y +++  F    D +  K  + +M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+VVTF++++D LCK    +EA    ++M + G+ PN   YNTL+ G    GR+  A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L  +MES+G +   ++Y+I I+ + K+ E   A+  + +M +KGI P +V  N     L
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EA+ L   +    CE D+
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              + LID L K+GR+  AW++F  +    L   VVTYN ++  L  +G++ KA +LF  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  K  +P+ ++FNTL+    +N+E    +++  +M
Sbjct: 603 MIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 209/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   GC P+++TY+ LI+ LC  G    A  LF +M   NG      KPD V
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM-KANGH-----KPDQV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY T++D     G +D  KE   QM+     PDVVT+  ++   C A D +EA   F  M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN+ T++ ++  L + G++E+A +LL  M  +GV+P A+ YN  +D F  +G  
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGET 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E F  M++ G   N+ + +  +    +   +  A ++++ +   G+ P  VTYN +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++ QV+ A  L  EM R+G   D     + ID L K G + EA ++F  ++ +K 
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+ GL K GR++ A ELF S+       + +++N ++   C + +++ A  
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALK 633

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  M      PD + +NT++ G I+ N+ +      H++
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 205/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   +  K++  G   N  +Y+ LI+ L ++G    AL ++  M++         KP   
Sbjct: 175 QMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG------LKPSLK 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++  L K+   +    LL +M+D  + P+V T+   IR    A   +EA  +F  M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P++VT++V++D LC  G++E A +L   M   G +P+  +Y TL+D F   G +
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  KE +  ME+ G   +V +++IL++  CK ++ + A + +  M  +GI P + TYNTL
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A KL   M+  GV    + Y  FID   K+G   +A+E F  ++    
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L + GRL+ A  +F+ L    L  D VTYN+M+      G++D+A +
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M   G  PD +  N+L+    +     +  ++  RM +
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 6/310 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +K  GC P+  T++ L+    ++G       L++EMI+        CKPDA+
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAI 859

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I  L K   +DKA +    +   +  P   TY  +I G        EA RLF EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G +PN   F+++++   K G  E A QL + M+  G+RP+   Y  L+D  CL GRV
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            + A   F  ++S G   +  +Y+ +ING  K++ +E AL+LY+EM ++GI P + TYN+L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             + L     VE+A ++++E+Q  G+  D + Y   I G   +     A  +++ + +  C
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 302  ELDIRSYSCL 311
              +I +Y+ L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 186/354 (52%), Gaps = 7/354 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            +++++A G  P+V+T++ L++ LC+      A   F+ M       G++  P+   Y T
Sbjct: 354 FWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ----GIL--PNLHTYNT 407

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL + G ++ A +LL  M+   + P   TYN  I  F  + ++ +A   F +M  +G
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN+V  +  +  L + G++ EA  +   + + G+ P++  YN +M  +   G+V+ A 
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M   GC+ +V   + LI+   K   ++ A  ++  M    + PTVVTYNTL  GL
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V++A +LF+ M     + +T ++ T +D  CKN  +  AL++F  + ++ C+ D+
Sbjct: 588 GKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDV 647

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +Y+ +I GL K  ++  A+  FH L +  +  D VT   ++  L   G++  A
Sbjct: 648 LTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 207/440 (47%), Gaps = 44/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +    C PN I+++TL++  C+     +AL +F +M   +      CKPD +
Sbjct: 595  KAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVL 648

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA------- 114
             Y T+I GL KE  V+ A     Q+K K+++PD VT  +++ G        +A       
Sbjct: 649  TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 115  --------KRLFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELM-------- 156
                     R F E +  G  V+  +    +  +EL  NG   E S L+ L+        
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 157  ------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
                         ++G+ P    YN L+          +A +LF  M+++GC  + F+++
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +L+  + K+ +I     LY EM+S+  KP  +TYN +   L + + +++A   F ++   
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                    Y   IDGL K G + EA+ LF  +    C+ +   ++ LI+G  K G  + A
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +LF  +    +  D+ +Y I++  LC  G++D+A   F ++++ G+ PD +A+N ++ G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 385  CIRNNETSKVVELLHRMDER 404
              ++    + + L + M  R
Sbjct: 1008 LGKSQRMEEALALYNEMRNR 1027



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            L+  LC+    + A  +F++     G       P    Y  +I  L +  + +KA +L  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
             MK+    PD  T+N ++     +    E   L+ EM+ +  +P+ +T+++++  L K+ 
Sbjct: 813  DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +++A      ++    RP    Y  L+DG    GR+  A  LF  M   GCK N   ++
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILINGY K  + E A  L+  M+++GI+P + +Y  L   L    +V+ A   F+E++  
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL K+  + EAL L+  +R      D+ +Y+ L+  L  +G ++ A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
              ++  L    L  DV TYN +I         + A+ ++ +M   G  P+   +  L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 32/413 (7%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-----LFEEMINGNGEF----- 52
            A   F +LK     P+ +T  TL+ GL + G    A++     +++     N  F     
Sbjct: 666  AFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 53   -GVVCKPD---AVIYTT--IIDGLCKEG---------FVDKAKELL-LQMKDK-----NI 91
             G + + +   A+I+    +++G+C+E               +EL   Q+ DK      I
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            +P + +YN +I      + + +A  LF +M + G  P+  TF++++    K+GK+ E  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            L + MI    +P+A  YN ++     +  +++A + F  + S   +    +Y  LI+G  
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            K   +E A+ L+ EM   G KP    +N L  G  +I   E A +LF  M   G+  D  
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +Y   +D LC  G + EAL  F  L+    + D  +Y+ +I+GL KS R++ A  L++ +
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                ++ D+ TYN ++  L   G +++A  ++ +++  G+ PD   +N L+ G
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 158/326 (48%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           + + D   Y TI   L   G + +   +L +M+      +  +YN +I     +    EA
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M+ +G++P++ T+S +M  L K    E    LL+ M  +G+RPN + +   +  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               G+++ A E+F  M+  GC  ++ +Y++LI+  C   ++E A  L+ +M + G KP 
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            V Y TL     +   ++   + + +M+  G   D   +   +D LCK     EA   F 
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD 391

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      ++ +Y+ LI GL ++GR++ A +L  ++    +     TYNI I      G
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSG 451

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  KA + F  M+AKG+ P+ VA N 
Sbjct: 452 ETGKAVETFEKMKAKGIVPNIVACNA 477



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF ++  +GC+PN   ++ LING  + G T  A  LF+ M+N         +PD  
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG------IRPDLK 964

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT ++D LC  G VD+A     ++K   ++PD + YN +I G   +    EA  L+ EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ T++ +M  L   G +E+A ++ E +   G+ P+ F YN L+ G+ L+   
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              A  ++ +M   GC  N+ +Y+ L N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 1/299 (0%)

Query: 105 FCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           F   +D  E      E M + + + ++ T+  I   L   G + + + +L  M + G   
Sbjct: 131 FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           NA+ YN L+     +G    A E++  M S G K ++ +YS L+    K ++ E  + L 
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM   G++P V T+      L    +++ A+++F  M   G   D   Y   ID LC  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G +  A ELF  ++    + D   Y  L+D     G L    E +  +     + DVVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            I++  LC     D+A   F  M  +G+ P+   +NTL+ G +R       ++LL  M+
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA   F +LK+ G +P+ I Y+ +INGL ++     AL L+ EM N     G+V  PD  
Sbjct: 981  EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR----GIV--PDLY 1034

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y +++  L   G V++AK +  +++   + PDV TYN++IRG+  + +   A  ++  M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 122  MDQGVQPNVVTFSVIMDE 139
            M  G  PN+ T++ + ++
Sbjct: 1095 MVDGCNPNIGTYAQLPNQ 1112



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 4/175 (2%)

Query: 233 PTVV-TYNT--LFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           PTV+ T  T    +    +H +VE    +F+ MQ+  +  D   Y T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
              +   +R     L+  SY+ LI  L +SG    A E++  +    L   + TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           AL      +    L  +ME  G+ P+   F   +    R  +  +  E+  RMD+
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 219/435 (50%), Gaps = 42/435 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  +K     PNV  Y+ LI GLC+      A  LF EM   N        P+ V 
Sbjct: 85  AMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN------LVPNRVT 138

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+IDG CK G VD A  L  +MK + + P ++T+NS++ G C A    EA+ +  E+ 
Sbjct: 139 FNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIK 198

Query: 123 DQGVQPNVVTFSVIMDEL------------------------------------CKNGKM 146
             G  P+  T+S+I D L                                    CK GK+
Sbjct: 199 CNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKV 258

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E+A ++L+ +++ G+ P   +YNT+++G+C  G ++RA      MES G + N  +++ +
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ +C+ + I+ A     +M+ KGI P+V TYN L  G   +    R F++ +EM+ +G 
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE 378

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +  +Y + I+ LCK+G I+EA  + R +       +   Y+ LIDG C  G+L+ A  
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALR 438

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            F  + +  + A +VTYN +I  LC  GK+ +A ++F  + + G  PD + +N+L+ G  
Sbjct: 439 FFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYS 498

Query: 387 RNNETSKVVELLHRM 401
               + K +EL   M
Sbjct: 499 NAGNSQKCLELYETM 513



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 218/439 (49%), Gaps = 43/439 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDA 60
           EA  +  ++K  G  P+  TYS + +GL ++      AL+L+ E I      G   K D 
Sbjct: 189 EARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAI------GKGVKIDN 242

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +++GLCKEG V+KA+E+L  + +  + P  V YN+++ G+C   D + A     +
Sbjct: 243 YTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQ 302

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN + F+ ++D+ C+   +++A + ++ M+  G+ P+   YN L+DG+     
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +R  ++   ME  G K NV SY  LIN  CK+ +I  A  +  +M+ +G+ P    YN 
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA----------- 289
           L  G   + ++  A + FDEM ++G+ A    Y + I GLCK G + EA           
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 290 ------------------------LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                                   LEL+ T++ L  +  I ++  LI G  K G +K+  
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKE 541

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF+ + +  L  D V YN MIH     G + KA  L  +M   GV PD   +N+L+LG 
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 386 IRNNETSKVVELLHRMDER 404
           ++  + S+  +L+  M  +
Sbjct: 602 LKEGKLSETKDLVDDMKAK 620



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 40/434 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L   G  P  + Y+T++NG C+ G    A+   E+M +         +P+ +
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG------LRPNCI 313

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++ID  C+   +DKA+E + +M  K I P V TYN +I G+      +   ++  EM
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G +PNV+++  +++ LCK+GK+ EA  +L  M+  GV PNA +YN L+DG C  G++
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A   F  M   G    + +Y+ LI G CK  +++ A  ++  + S G  P V+TYN+L
Sbjct: 434 REALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK------------------- 282
             G       ++  +L++ M++ G+      +   I G  K                   
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLS 553

Query: 283 ---------------NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                           G++ +A  L + +  +    D ++Y+ LI G  K G+L    +L
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDL 613

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +    LI +  TY+++I   C     + A+  + +M   G  P+    N L  G  +
Sbjct: 614 VDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRK 673

Query: 388 NNETSKVVELLHRM 401
           +    +   +   M
Sbjct: 674 DGRLQEAQSICSEM 687



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 7/370 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K+   G  P+V TY+ LI+G  R         + EEM   NGE     KP+ +
Sbjct: 330 KAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM-EENGE-----KPNVI 383

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+ LCK+G + +A+ +L  M  + + P+   YN +I G C      EA R F EM
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+   +VT++ ++  LCK GK++EA ++  L+   G  P+   YN+L+ G+   G  
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +  EL+ +M+ +G K  + ++  LI+G C  + I+   +L++EML   + P  V YN +
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAM 562

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E   V++AF L  EM   GV  D   Y + I G  K G + E  +L   ++    
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI G C       A+  +  +     + +V   N +   L  DG++ +A  
Sbjct: 623 IPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682

Query: 362 LFLDMEAKGV 371
           +  +M A G+
Sbjct: 683 ICSEMIANGM 692



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 150/267 (56%), Gaps = 1/267 (0%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM+  G +P+ + +   M    K G ++ A +L E M +  V PN FVYN L+ G C
Sbjct: 53  LFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLC 112

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              R+  A++LF  M       N  +++ LI+GYCK  E++ A+ L   M  + ++P+++
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSII 172

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRT 295
           T+N+L  GL +  ++E A  + +E++ +G   D + Y    DGL K +     AL+L+R 
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE 232

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                 ++D  + S L++GLCK G+++ A E+  SL    L+   V YN +++  C  G 
Sbjct: 233 AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           MD+A      ME++G+ P+C+AFN+++
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVI 319



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 201/438 (45%), Gaps = 45/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           + + L+  ++  G  P+      ++  L  +      L+LF+EM+      G+  +PD +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMV------GLGFRPDKL 67

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   +    K G +  A EL   MK + + P+V  YN +I G C      +A++LF EM
Sbjct: 68  VYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM 127

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PN VTF+ ++D  CK G+++ A  L E M +  V P+   +N+L+ G C   R+
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI 187

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG-ALSLYSEMLSKGIK-------- 232
             A+ +   ++  G   + F+YSI+ +G  K+ +  G AL LY E + KG+K        
Sbjct: 188 EEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSI 247

Query: 233 ---------------------------PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                      P  V YNT+  G  +I  ++RA    ++M+  G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  +  A+ + ID  C+   I +A E  + +        + +Y+ LIDG  +       +
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ++   +       +V++Y  +I+ LC DGK+ +A  +  DM  +GV P+   +N L+ G 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 386 IRNNETSKVVELLHRMDE 403
                  K+ E L   DE
Sbjct: 428 CT---VGKLREALRFFDE 442



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 9/290 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G  PN   Y+ LI+G C  G    AL  F+EM + NG    +     
Sbjct: 399 LEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM-SKNGIGATI----- 452

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++I GLCK G + +A+E+   +      PDV+TYNS+I G+  A +S +   L+  
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512

Query: 121 MMDQGVQPNVVTFSVIMDELCKNG-KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M   G++P + TF  ++    K G K++E   L   M+Q+ + P+  VYN ++  +  TG
Sbjct: 513 MKKLGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETG 570

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V +A  L   M  MG + +  +Y+ LI G+ K  ++     L  +M +KG+ P   TY+
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            L  G  ++     A+  + EM  +G   +         GL K+G + EA
Sbjct: 631 LLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 3/295 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++   L+  M  +G  P+     +I++ L ++ K +    L + M+ +G RP+  VY   
Sbjct: 13  SQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRA 72

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           M      G +  A ELF +M+      NVF Y++LI G CK K I  A  L+ EM  + +
Sbjct: 73  MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL 132

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VT+NTL  G  +  +V+ A  L + M++  V      + + + GLCK   I EA  
Sbjct: 133 VPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARC 192

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGR-LKIAWELFH-SLPRGVLIADVVTYNIMIHA 349
           +   ++      D  +YS + DGL KS      A +L+  ++ +GV I D  T +I+++ 
Sbjct: 193 MLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI-DNYTCSILLNG 251

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LC +GK++KA ++   +   G+ P  V +NT++ G  +  +  + +  + +M+ R
Sbjct: 252 LCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 214/425 (50%), Gaps = 45/425 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   + A G +PNV++Y+ L+ GLC+      A  L  +MI+  G       PD V Y+T
Sbjct: 32  LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRS----TPDLVTYST 87

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPD------------------------------- 94
           ++ G CK G V++++ELL ++  + + PD                               
Sbjct: 88  LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG 147

Query: 95  ----VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
               ++T+N++I G C   +   A  L   M   GV+ +VVT++ +MD LCK G+++EA 
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           QLLE M   G  P+   Y++ + G C +G+V  A ++   M       NV +Y+ +++G 
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGL 267

Query: 211 CKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           CK+ +I+ AL +  +M S  G    VV Y+T+  GL ++ + + A  + + M R G   D
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y + ++GLCK G I EA+E  R + +  C+ +  +Y  L+ GLC  GRL  A  +  
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 330 SLPRGVLIAD-----VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +  G    D     V TYN +I  LC  G++D A   F  M ++G  PD V+++T++ G
Sbjct: 388 EMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447

Query: 385 CIRNN 389
             R+ 
Sbjct: 448 LARSG 452



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 198/349 (56%), Gaps = 3/349 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C P++V +  +++G  K+G     + LL  M  + I P+VV+YN ++ G C     +EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 116 RLFIEMMDQGVQ--PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
            L  +M+ +G +  P++VT+S ++   CK GK+EE+ +LL+ +I  G+RP+A +Y  +M 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C + R+  A EL   M   GC   + +++ LI+G C+ K +E A SL   M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVTYNTL  GL +  +++ A +L + M+  G A D  AY +F+ GLCK+G ++ A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCA 352
             +R    + ++ +Y+ ++DGLCKSG++  A E+   +        +VV Y+ ++  LC 
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G+  +A  +   M   G  PD V +++L+ G  +  +  + VE +  M
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 178/313 (56%), Gaps = 12/313 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P +IT++TLI+G CR  +  +A +L + M       GV  K D V Y T++DGLCK 
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTM----AASGV--KADVVTYNTLMDGLCKA 200

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A++LL +MK     PDVV Y+S + G C +     A ++  +M D    PNVVT+
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260

Query: 134 SVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + I+D LCK+GK++ A +++E M    G   N   Y+T++DG C  GR   A+ +  +M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC+ +V +YS L+NG CK  +IE A+    EM  +G KP  VTY +L  GL    ++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 253 RAFKLFDEMQRHGVAAD-----TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
            A ++ +EM   G   D        Y   I GLCK G I +AL+ F+ +R   C+ D  S
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 308 YSCLIDGLCKSGR 320
           YS +++GL +SGR
Sbjct: 441 YSTIVEGLARSGR 453



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 184/364 (50%), Gaps = 12/364 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  L  ++ + G  P+ + Y+ ++  LC++     AL L EEMI         C P  +
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG------CCPTLI 153

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G C+E  ++ A  LL  M    +  DVVTYN+++ G C A    EA++L   M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV +S  +  LCK+GK+  A Q+LE M      PN   YNT++DG C +G++
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKI 273

Query: 182 NRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A E+   M S  GC  NV  YS +++G CK    + A S+   M   G +P VVTY++
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL- 299
           L  GL +  ++E A +   EM   G   +   Y + + GLC  G + EA  +   +    
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393

Query: 300 ----KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                C   + +Y+ LI GLCK+GR+  A + F  +       D V+Y+ ++  L   G+
Sbjct: 394 GGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453

Query: 356 MDKA 359
             +A
Sbjct: 454 ALQA 457



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 42/321 (13%)

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MD+ G  PN VTF+ +++   K G+  +  +LLE M   G++PN   YN L++G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 181 VNRAKELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK------ 232
            + A+EL   M S G +   ++ +YS L++GYCK  ++E +  L  E++S+G++      
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 233 -----------------------------PTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
                                        PT++T+NTL  G      +E A  L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            GV AD   Y T +DGLCK G + EA +L   ++   C  D+ +YS  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLM 382
           A ++   +       +VVTYN ++  LC  GK+D A ++   M  + G   + V ++T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 383 LGCI---RNNETSKVVELLHR 400
            G     R  E   V+E + R
Sbjct: 301 DGLCKLGRTQEARSVMEAMAR 321



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 135/252 (53%), Gaps = 2/252 (0%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M + G  PN+  +N L++GF   GR    + L  +M + G + NV SY+ L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 216 IEGALSLYSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              A  L  +M+S+G +  P +VTY+TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              +  LCK+  + EALEL   +    C   + +++ LI G C+   L++A  L  ++  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             + ADVVTYN ++  LC  G++ +A  L   M+A G APD VA+++ + G  ++ +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 394 VVELLHRMDERN 405
             ++L +M + +
Sbjct: 241 AHQVLEQMRDSD 252


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 202/376 (53%), Gaps = 8/376 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIID 68
           +K  G  P+V++YST+ING C  G     L L +EM + G        KP+   Y +II 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG-------LKPNLYTYNSIIL 53

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G VD A+ +L +M ++ I PD V Y ++I GFC   +   A +LF EM  Q + P
Sbjct: 54  LLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP 113

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           + + ++ ++  LC+ GKM EA ++   M   GV P+   Y TL+DG+C +G + +A  L 
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   NV +Y+ L +G CK  +++ A  L  EM  KG++  + TYN+L  GL + 
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             + +A KL +EM+  G+  DT  + T +D  CK G +V+A EL R +     +  + ++
Sbjct: 234 GNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITF 293

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + L++G C SG L+    L   +    ++ +  TYN ++   C    M    +++  M A
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCA 353

Query: 369 KGVAPDCVAFNTLMLG 384
           +GV PD   +N L+ G
Sbjct: 354 RGVMPDSNTYNILIKG 369



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 195/333 (58%), Gaps = 1/333 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V Y+T+I+G C  G + K  +L+ +M+ K + P++ TYNS+I   C +   ++A+R+
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM++QG+ P+ V ++ ++D  CK G ++ A +L + M +  + P+   Y  ++ G C 
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++  A ++F  M S G + +  +Y+ LI+GYCK+ E+E A SL+++M+  G+ P VVT
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  GL ++ QV+ A +L  EM   G+  +   Y + ++GLCK+G I +A++L   + 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     D  +++ L+D  CK+G +  A EL   +    L   V+T+N++++  C  G ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
               L   M  KG+ P+   +N+LM   CIRNN
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 8/397 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G +PN+ TY+++I  LC++G    A  +  EMIN     G+V  PD V+YTT
Sbjct: 32  LIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQ----GIV--PDTVVYTT 85

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK G +  A +L  +M+ + I PD + Y +VI G C      EA ++F +M  +G
Sbjct: 86  LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+P+ VT++ ++D  CK+G+ME+A  L   M+Q G+ PN   Y  L DG C  G+V+ A 
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   G + N+ +Y+ L+NG CK+  I  A+ L  EM   G+ P  +T+ TL    
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++ +A +L  EM   G+      +   ++G C +G + +   L   +       + 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +Y+ L+   C    ++   E++  +  RGV+  D  TYNI+I   C    M +A  L  
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM-PDSNTYNILIKGHCKARNMKEAWFLHK 384

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M  KG      ++N+++ G  +  + S+  EL   M
Sbjct: 385 EMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 186/360 (51%), Gaps = 6/360 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +++     P+ I Y+ +I GLCR G  + A  +F +M      F    +PD V 
Sbjct: 99  AYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM------FSRGVEPDEVT 152

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+IDG CK G ++KA  L  QM    + P+VVTY ++  G C     + A  L  EM 
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMC 212

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+Q N+ T++ +++ LCK+G + +A +L+E M   G+ P+   + TLMD +C TG + 
Sbjct: 213 GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMV 272

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A EL   M   G +  V ++++L+NG+C +  +E    L + ML KGI P   TYN+L 
Sbjct: 273 KAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                 + +    +++  M   GV  D+  Y   I G CK   + EA  L + +      
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L   SY+ +I G  K  ++  A ELF  + R  + AD   YN+ +     +G M+ A +L
Sbjct: 393 LTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 170/327 (51%), Gaps = 6/327 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  +F K+ + G EP+ +TY+TLI+G C++G    A +L  +M+           P+ 
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG------LTPNV 185

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT + DGLCK G VD A ELL +M  K +  ++ TYNS++ G C + +  +A +L  E
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+ +TF+ +MD  CK G+M +A +LL  M+  G++P    +N LM+GFC++G 
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +   + L   M   G   N  +Y+ L+  YC    +     +Y  M ++G+ P   TYN 
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ A+ L  EM   G      +Y + I G  K   I EA ELF  +R   
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWEL 327
              D   Y+  +D     G ++ A EL
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 153/281 (54%)

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G  P+VV++S +++  C  G++++  +L++ M   G++PN + YN+++   C +G+V+ 
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A+ +   M + G   +   Y+ LI+G+CK   I+ A  L+ EM  + I P  + Y  +  
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL    ++  A K+F++M   GV  D   Y T IDG CK+G + +A  L   +       
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++ +Y+ L DGLCK G++  A EL H +    L  ++ TYN +++ LC  G + +A  L 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +ME  G+ PD + F TLM    +  E  K  ELL  M +R
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 2/212 (0%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+  G   +V SYS +INGYC   E++  L L  EM  KG+KP + TYN++ + L +  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+ A ++  EM   G+  DT  Y T IDG CK G I  A +LF  +   +   D  +Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 311 LIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           +I GLC+ G++  A ++F+ +  RGV   D VTY  +I   C  G+M+KA  L   M   
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVE-PDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G+ P+ V +  L  G  +  +     ELLH M
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEM 211



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 6/226 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G  P+ IT++TL++  C+TG  + A  L  EM++         +P  +
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG------LQPTVI 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++G C  G ++  + LL  M +K I P+  TYNS+++ +C  N+      ++  M
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  T+++++   CK   M+EA  L + M + G    A  YN+++ GF    ++
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A+ELF  M   G   +   Y++ ++       +E AL L  E +
Sbjct: 412 SEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 76/144 (52%)

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+  G A D  +Y T I+G C  G + + L+L + +++   + ++ +Y+ +I  LCKSG+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A  +   +    ++ D V Y  +I   C  G +  A+ LF +ME + + PD +A+  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           ++ G  R  +  +  ++ ++M  R
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSR 144



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 6/145 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN  TY++L+   C   +    +    E+  G    GV+  PD+  Y  +I G CK 
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNN----MRCTTEIYKGMCARGVM--PDSNTYNILIKGHCKA 373

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + +A  L  +M +K  N    +YNS+I+GF      +EA+ LF EM  +G+  +   +
Sbjct: 374 RNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIY 433

Query: 134 SVIMDELCKNGKMEEASQLLELMIQ 158
           ++ +D     G ME A +L +  I+
Sbjct: 434 NLFVDISYGEGNMETALELCDEAIE 458


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 208/383 (54%), Gaps = 11/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +K+  C P+++TY+ LIN  C  G    AL+LF+ M           +PD  
Sbjct: 28  QALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK-----RVEPDRW 82

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GLC  G  + A++LL +M+DKNI  +V TY+S+I+         E+ ++  EM
Sbjct: 83  TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G  P+V  F+ +M    ++  ME+A ++ + M++ G +P+   Y+ L+ G    G++
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202

Query: 182 NRAKELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + + ++   ++M + G   NV ++S LI+G C+  E+E AL ++  ML  G KP   TY 
Sbjct: 203 DESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 262

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-I 298
           TL  GL    +V +A +LF++M +  +  D  AY + I G CK G + EA +L+R +   
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +  I +++ LIDG CK G+L  A EL   +    L AD  TY I+I  L    K+D+
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382

Query: 359 AHDLFLDMEAKGVAPD---CVAF 378
           A +++  M  K    D   CV+F
Sbjct: 383 ALEVYKQMREKKFLLDPVSCVSF 405



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 206/389 (52%), Gaps = 10/389 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
            Y  ++  L + G    AL +FE M + +      C P  V Y  +I+  C  G   KA 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSES------CVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 81  ELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +L   MK +K + PD  TYN++I G C + ++  A++L  EM D+ +  NV T+S I+  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L K  K EE+ ++LE M+  G  P+ F +N +M GF  +  + +A+E++  M   G K +
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             SY ILI+G  K  +++ +L + SEM   + G  P V+T++TL  GL    ++E+A ++
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F  M   G   + + Y T I GLC+   +++A ELF  +       D  +Y+ LI G CK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 318 SGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            G +  A +L+  +  G  L   +VT+N +I   C  GK+ +A++L  +M  KG+A D  
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  L+ G  R  +  + +E+  +M E+ 
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKK 394



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 7/261 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++A G  PNVIT+STLI+GLCRTG    AL +F  M+         CKP+   YTT+I G
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLIAG 267

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD-QGVQP 128
           LC+   V +A+EL  +M    I PD V YNS+I G+C     +EA++L+ EM    G+QP
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 327

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            +VTF+ ++D  CK GK+  A++L+  M   G+  +   Y  L+ G     +++ A E++
Sbjct: 328 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVY 387

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M       +  S    + G CK   I+ A +++      G  P   T+  L   L ++
Sbjct: 388 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 447

Query: 249 HQVERAFKLFDEMQRHGVAAD 269
            +VE A KL +  +   + A 
Sbjct: 448 GRVEDAQKLMEPAKARDITAQ 468



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 7/231 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   GC+PN  TY+TLI GLCR    I A  LFE+M            PDAV
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ------ACIPPDAV 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y ++I G CK G +D+A++L  +M     + P +VT+N++I GFC       A  L  E
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+  +  T+ +++  L +  K++EA ++ + M +     +     + + G C TG 
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 414

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +++A  +F +    G   N  ++ IL     K   +E A  L     ++ I
Sbjct: 415 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 38/251 (15%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M    C     +Y  ++    K   +  AL ++  M S+   P++VTYN L        +
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 251 VERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLR------------ 297
             +A  LF  M+R   V  D W Y T I GLC +G    A +L   +R            
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 298 -ILK----------------------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
            I+K                      C  D+ +++ ++ G  +S  ++ A E++  +   
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLF--LDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               D V+Y+I+IH L   GK+D++  +   + M A G  P+ + F+TL+ G  R  E  
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 393 KVVELLHRMDE 403
           K +E+   M E
Sbjct: 241 KALEVFGSMLE 251



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           KC +   +Y  ++  L K+G L  A E+F ++     +  +VTYN++I++ C  G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 360 HDLFLDME-AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DLF  M+  K V PD   +NTL+ G   +  T    +LL  M ++N
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKN 111


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 208/373 (55%), Gaps = 10/373 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  ++K  G  P+V+T+S+++  LC TG+   A+  F E         V C PD+V
Sbjct: 123 RAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--------SVECAPDSV 174

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  ++ GLCK   + +A++++ +M ++ I PDVVTYNS+I G C +    EA++L   M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V+PN+VT++ ++   CK G    A QL+E MIQ G  P+   +N+L+ GFC   ++
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   M+   C  N+ +Y++LI+G C       A  L SEM  +GI P ++TYN+L
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354

Query: 242 FIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            IG+F    Q+E+AF++ + M   GV  D  +Y T    L K+    EA  L   +    
Sbjct: 355 -IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +++ L++GLC S RL  A  L   + R        TY +++  LC  G++D A 
Sbjct: 414 AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAK 473

Query: 361 DLFLDMEAKGVAP 373
           ++ + M ++G+ P
Sbjct: 474 EVLVMMVSEGIQP 486



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 196/362 (54%), Gaps = 9/362 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+ + ++ L++GLC+      A  + EEM     E G+V  PD V Y ++IDGLCK  
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEM----SERGIV--PDVVTYNSLIDGLCKSY 222

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +++A++LL  M  + + P++VTYN++I G+C    +  A +L   M+  G  P+VVTF+
Sbjct: 223 RMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFN 282

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++   C+  K+++A ++L LM +    PN   YN L+ G C  GR N A EL   M+  
Sbjct: 283 SLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   ++ +Y+ LI  +C+N +IE A  + + M+ +G+ P  ++Y TL + L +  + + A
Sbjct: 343 GILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEA 402

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           F L D M   G   + + + + ++GLC +  + EA  L   +R + C+    +Y  L+ G
Sbjct: 403 FALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTG 462

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA---HDLFLDMEAKGV 371
           LCK+GR+  A E+   +    +   V +   ++H L  +GK D A    D  +  E+K  
Sbjct: 463 LCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKAC 522

Query: 372 AP 373
            P
Sbjct: 523 DP 524



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 198/385 (51%), Gaps = 10/385 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+ N ITY+TLI G C+ G    A  L  EM     E G    PD V +++I+  LC  G
Sbjct: 101 CDTNHITYNTLIGGFCKAGDMERAFQLLAEM----KERGH--SPDVVTHSSIVQALCNTG 154

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            + +A +   +  +    PD V +N ++ G C AN  +EA+++  EM ++G+ P+VVT++
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D LCK+ +MEEA QLLE M++  VRPN   YNTL+ G+C TG    A +L   M   
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPTVVTYNTLFIGLFEIHQVER 253
           G   +V +++ LI+G+C+  +I+ A  +   ++ KG+  P +VTYN L  GL +  +   
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANE 331

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L  EM   G+  D   Y + I   C+N  I +A ++   +       D  SY  L  
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAV 391

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L KS R   A+ L  ++     I ++ T+N ++  LC   ++D+A  L   M   G  P
Sbjct: 392 ALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDP 451

Query: 374 DCVAFNTLMLGCIRNNETSKVVELL 398
               +  L+ G  +        E+L
Sbjct: 452 AASTYEVLVTGLCKAGRVDDAKEVL 476



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 168/321 (52%), Gaps = 6/321 (1%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           ELL Q  D N     +TYN++I GFC A D   A +L  EM ++G  P+VVT S I+  L
Sbjct: 95  ELLGQHCDTNH----ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQAL 150

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G +  A Q     ++    P++ ++N L+ G C   +++ A+++   M   G   +V
Sbjct: 151 CNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI+G CK+  +E A  L   M+ + ++P +VTYNTL  G  +      A +L + 
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M + G   D   + + I G C+   I +A E+   ++   C  ++ +Y+ LI GLC +GR
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
              A EL   +    ++ D++TYN +I   C + ++++A  +   M  +GV PD +++ T
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L +  +++    +   LL  M
Sbjct: 389 LAVALLKSERFDEAFALLDNM 409



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 170/309 (55%), Gaps = 3/309 (0%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFI-EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           T N ++R    A   ++A ++F  E++ Q    N +T++ ++   CK G ME A QLL  
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M + G  P+   +++++   C TG ++RA + F   ES+ C  +   ++IL++G CK  +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF--RESVECAPDSVLFNILVHGLCKANQ 188

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A  +  EM  +GI P VVTYN+L  GL + +++E A +L + M +  V  +   Y T
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I G CK G    A +L   +       D+ +++ LI G C+  ++  A E+ H + +G+
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              ++VTYN++I  LC  G+ ++A +L  +M+ +G+ PD + +N+L+    RN +  +  
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 396 ELLHRMDER 404
           ++ + M ER
Sbjct: 369 QIQNLMVER 377



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 153/306 (50%), Gaps = 45/306 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +      PN++TY+TLI G C+TG T +A  L E MI           PD V
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH------PDVV 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++I G C++  +DKA E+L  MK     P++VTYN +I G C A  +NEA  L  EM
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-------------------- 161
             +G+ P+++T++ ++   C+N ++E+A Q+  LM++ GV                    
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399

Query: 162 ---------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                           PN F +N+LM+G C + R++ A+ L   M  +GC     +Y +L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G CK   ++ A  +   M+S+GI+P V +  T+   L    + + A   FD++    V
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV----V 515

Query: 267 AADTWA 272
           AA++ A
Sbjct: 516 AAESKA 521



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 165/328 (50%), Gaps = 8/328 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G  P+V+TY++LI+GLC++     A  L E M+          +P+ V
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK------VRPNLV 244

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK G    A +L+ +M     +PDVVT+NS+I GFC  +  ++A  + + +
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV-LHL 303

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +G+  PN+VT++V++  LC  G+  EA +LL  M   G+ P+   YN+L+  FC   +
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A ++   M   G   +  SY  L     K++  + A +L   M   G  P + T+N+
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    +++ A  L   M+R G       Y   + GLCK G + +A E+   +    
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELF 328
            +  + S   ++  L + G+  +A   F
Sbjct: 484 IQPLVSSSGTIVHTLAREGKQDLALHYF 511



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 138/278 (49%), Gaps = 5/278 (1%)

Query: 129 NVVTFSVIMDELCKNGKMEEASQLL--ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           N  T + ++  L K  +  +A Q+   EL+ Q     N   YNTL+ GFC  G + RA +
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQ-HCDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L   M+  G   +V ++S ++   C    +  A+  + E  S    P  V +N L  GL 
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLC 184

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           + +Q+  A ++ +EM   G+  D   Y + IDGLCK+  + EA +L  T+   K   ++ 
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI G CK+G   +A +L   + +     DVVT+N +I   C   K+DKA ++   M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +    AP+ V +N L+ G       ++  ELL  MD R
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 192/352 (54%), Gaps = 22/352 (6%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           G +   D V+Y TIIDGLCK+  V+ A EL  +M  + I+PDV T+NS+I GFC      
Sbjct: 10  GKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A  LF +M+ + + P+V TF++++D LCK GKM+EA  ++ +M++ GV PN   Y ++M
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G+CL   VN+ K +F ++  MG   N  SY+I+ING+CK K +  AL L+ EM  +GI 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VTY++L  GL +   +         M  H +   T  Y   ID LCK+ ++ +A+ L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + ++                     GRLK A ++F  L       ++ TYNIMI+ LC 
Sbjct: 247 VKKIK-------------------DQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G  D+A  L   M+  G+ PD V + T +      +E  K  +L  +M  R
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIAR 339



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 167/354 (47%), Gaps = 28/354 (7%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V+ Y+T+I+GLC+      A  L+ EMI           PD   + ++I G C  G + 
Sbjct: 16  DVVMYNTIIDGLCKDKLVNDAYELYSEMIAEK------ISPDVATFNSLIYGFCIIGQLK 69

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  L  QM  KNINP V T+  ++ G C      EAK +   MM  GV PNVVT++ IM
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           +  C   ++ +   +   + ++GV PN   YN +++GFC    VN A  LF  M   G  
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
               +YS LI+G CK+  +   L     M++  I P  V Y      L + + +++A  L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             +++  G   +                   A ++F+ L I    L+I++Y+ +I+GLCK
Sbjct: 247 VKKIKDQGRLKN-------------------AQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G    A  L   +    +I D VTY   I AL    + +KA  LF  M A+G+
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGL 341



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 54/313 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++ A    P+V T+++LI G C  G    A  LF +M+  N        P   
Sbjct: 35  DAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKN------INPSVY 88

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++DGLCKEG + +AK ++  M    + P+VVTY S++ G+C  N+ N+ K +F  +
Sbjct: 89  TFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTI 148

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT--- 178
              GV PN  +++++++  CK   + EA  L + M   G+ P    Y++L+DG C +   
Sbjct: 149 SRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCKSTML 208

Query: 179 ---------------------------------------------GRVNRAKELFVSMES 193
                                                        GR+  A+++F  +  
Sbjct: 209 GSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNAQDVFQDLLI 268

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N+ +Y+I+ING CK    + A +L S+M   GI P  VTY T    LF   + E+
Sbjct: 269 KGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEK 328

Query: 254 AFKLFDEMQRHGV 266
           A KLF +M   G+
Sbjct: 329 AEKLFRKMIARGL 341



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           D+++   V +D   Y T IDGLCK+  + +A EL+  +   K   D+ +++ LI G C  
Sbjct: 6   DQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCII 65

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G+LK A+ LF  +    +   V T+ I++  LC +GKM +A  +   M   GV P+ V +
Sbjct: 66  GQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTY 125

Query: 379 NTLMLG-CIRN--NETSKVVELLHRM 401
            ++M G C+ N  N+T  V   + RM
Sbjct: 126 TSIMEGYCLVNEVNKTKHVFRTISRM 151


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+   +   GC P+V+TY+ L+   C+      A+ L +EM +        C PD V 
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG------CAPDIVT 238

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++G+C+EG V+ A E L  +      P+ V+YN V++G   A    +A++L  EM 
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVTF++++  LC+ G +E A ++LE M Q G  PN+  YN L+  FC   +++
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A E    M S GC  ++ SY+ L+   C+N E++ A+ L  ++  KG  P +++YNT+ 
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A +L DEM   G+  D   Y T   GLC+   I EA+  F  ++ +   
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                Y+ ++ GLCK      A +LF  +     + +  TY I++  L  +G + +A +L
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAREL 538

Query: 363 FLDMEAKGV 371
           F  + ++GV
Sbjct: 539 FAQLCSRGV 547



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 20/409 (4%)

Query: 4   AALFTKLKAFG-----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF 52
           AAL  KL A G             P+V+ Y+ ++ G C  G    A  L  +M       
Sbjct: 108 AALIKKLCASGRTADARRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADM------- 160

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
               +PDA  Y T+I GLC  G    A  +L  M  +   PDVVTY  ++   C  +   
Sbjct: 161 --PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYK 218

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A +L  EM D+G  P++VT++V+++ +C+ G++E+A + L+ +   G  PN   YN ++
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G     R   A++L   M   GC  NV ++++LI+  C+   +E A+ +  +M   G  
Sbjct: 279 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT 338

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN L     +  ++ +A +  + M   G   D  +Y T +  LC+NG +  A+EL
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L+   C   + SY+ +IDGL K+G+ K A EL   +    L  D++TY+ +   LC 
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + ++++A   F  ++  G+ P    +N ++LG  +  ET   ++L   M
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM 507



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 182/376 (48%), Gaps = 12/376 (3%)

Query: 29  LCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD 88
           L R G    AL L + +   N        P A +    I  LC  G    A+ +L     
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAAL----IKKLCASGRTADARRVLAAS-- 130

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
               PDV+ YN+++ G+C A   + A+RL  +M    V+P+  T++ ++  LC  G+   
Sbjct: 131 ---GPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A  +LE M + G  P+   Y  L++  C      +A +L   M   GC  ++ +Y++++N
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G C+   +E A+     + S G +P  V+YN +  GLF   + E A KL +EM   G   
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +   +   I  LC+ G +  A+E+   +    C  +  SY+ L+   CK  ++  A E  
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +       D+V+YN ++ ALC +G++D A +L   ++ KG +P  +++NT++ G  + 
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 389 NETSKVVELLHRMDER 404
            +T + +ELL  M  +
Sbjct: 425 GKTKEALELLDEMTSK 440



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 178/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPS----YG--CEPNTV 272

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GL      + A++L+ +M  K   P+VVT+N +I   C       A  +  +M
Sbjct: 273 SYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM 332

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  K+ +A + +ELM+  G  P+   YNTL+   C  G V
Sbjct: 333 PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L  EM SKG++P ++TY+T+
Sbjct: 393 DVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI 452

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+      Y   + GLCK      A++LF  +    C
Sbjct: 453 ASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGC 512

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y+ L++GL   G +K A ELF  L  RGV+
Sbjct: 513 MPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 203/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++K+ G  P+V TYS LI+G C+ G     L L EEM   N E      P  V
Sbjct: 343 EALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME------PSLV 396

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++  GLCK+   D + ++   +       D   Y+ +I+GFC   D + A +L  EM
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P+   F  ++   CK G    A +   +M++ G+ P+    N ++D  C  GRV
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M++ G   N+F+Y+ +IN  CK ++ E AL L+  ML + + P+VV Y+TL
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    ++A  L+  M + GV  D  AY   I+ LC    + EA  LF+ +     
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGM 636

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY+ +I G C+ G ++ AW LF+ + +   +  VVTY  ++   C   ++D A  
Sbjct: 637 TPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADM 696

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M+ KG+ PD V +N L+    R     K +E+L+ M E
Sbjct: 697 LIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKE 738



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 170/332 (51%), Gaps = 6/332 (1%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYAN------DSNEAKRLFIEMMDQGVQPNVVTF 133
           + L  +MK     P+V TY  ++  +C  N      D+ +A  +  EM   G  P VVT+
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S  +  LC+ G +E A   +  +I      N + YN ++ G C  G ++ A ++   M+S
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V++YSILI+G+CK  ++E  L L  EM    ++P++V+Y++LF GL +    + 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           +  +F ++   G   D  AY   I G C  G +  A +L   +       D  ++  L+ 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G    A E F+ +  G ++  + T N++I A C +G++++A +L  +M+ +G+ P
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   +N ++    +  ++ + +EL   M +RN
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRN 565



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 144/271 (53%), Gaps = 6/271 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F  +   G  P++ T + +I+  CR G    ALNL  EM    G F     P+   
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM-QTQGIF-----PNLFT 537

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+ LCKE   ++A EL   M  +N+ P VV Y+++I GF   ++S +A  L+  M+
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P++V ++++++ LC   +M EA  L + M + G+ P+   Y +++ GFC  G + 
Sbjct: 598 KIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMR 657

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  LF  M   G    V +Y+ L++GYCK   I+ A  L  EM  KGI P VVTYN L 
Sbjct: 658 KAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLI 717

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                   +++A ++ +EM+ +GV  D   Y
Sbjct: 718 AAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 125/240 (52%), Gaps = 6/240 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  PN+ TY+ +IN LC+   +  AL LF  M+  N        P  V
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN------VLPSVV 571

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+T+IDG  K+    KA  L  +M    + PD+V Y  +I   C+ +   EA  LF +M
Sbjct: 572 VYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+ ++++ ++   C+ G M +A  L   M+Q G  P    Y +L+DG+C   R+
Sbjct: 632 TENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRI 691

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M+  G   +V +Y++LI  + +   ++ AL + +EM   G+ P  +TY  L
Sbjct: 692 DIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 135/323 (41%), Gaps = 44/323 (13%)

Query: 106 CYANDSN-EAKRLFIEMMD--QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
           CY N  N +A  LF  +++  +    +V+ F +++     N  +E A  +     + G+ 
Sbjct: 152 CYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLE 211

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK------EI 216
            +    N L+       R    + LF  M+S G   NVF+Y+I++N YCK        + 
Sbjct: 212 LSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDT 271

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE------------------------ 252
             A  +  EM   G  PTVVTY+T   GL  +  VE                        
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI 331

Query: 253 -----------RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                       A K+ +EM+  G++ D + Y   I G CK G + + L L   ++    
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + SYS L  GLCK     I+ ++F  L       D   Y+I+I   C  G +D AH 
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M    +APD   F +L+ G
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHG 474


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 219/434 (50%), Gaps = 30/434 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EAA +F  + A G  PN++TY  L++G    G     ++ F  M               I
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G++                PD   Y+T+I  LC+ G +  A +   QM    + 
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQ 151
           P+ V Y+S+I+GFC   D  +AK L  EMM+ G+ +PN+  F+ I+  +CK G++ +A  
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + +L+  IG R +  ++NTL+DG+CL G + +A  +  +M S G   + F+Y+ L+NGY 
Sbjct: 419 IFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYF 478

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  I+  L+L+ EM  K IKPT VTYN +  GLF   +   A K+  EM   G      
Sbjct: 479 KSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLP 538

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   + GLC+N    EA+ +F+ L  +  + +I + + +I+ +    R + A +LF ++
Sbjct: 539 TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ +  TY IMI  L  +G +++A ++F  ME  G AP     N  +   +   E 
Sbjct: 599 SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEI 658

Query: 392 SKVVELLHRMDERN 405
            K    + ++D ++
Sbjct: 659 VKAGNYMSKVDGKS 672



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 208/391 (53%), Gaps = 7/391 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V+TY+T+I+G  + G    A NL+ EM+    + G V  PD V + +II+ LCK  
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMM----QQGFV--PDVVTHNSIINALCKAR 165

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD A+ LL QM D  + P+ VTY S+I G+       EA ++F EM  +G+ P++V+++
Sbjct: 166 AVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWN 225

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
             MD LCK+G+ +EA+++   M   G RPN   Y  L+ G+   G        F +M+  
Sbjct: 226 SFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGD 285

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   N   ++ILI+ Y K   ++ A+ + SEM  +G+ P V TY+TL   L  + ++  A
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-FRTLRILKCELDIRSYSCLID 313
              F++M   GV  +T  Y + I G C +G +V+A EL +  +       +I  ++ ++ 
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            +CK GR+  A  +F  +      +D++ +N +I   C  G+M KA  +   M + G+ P
Sbjct: 406 SICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGP 465

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D   +NTL+ G  ++      + L   M ++
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 198/397 (49%), Gaps = 5/397 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC P+  +Y+ ++  LC    +  AL+L   M    G    VC PD V Y T
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEG----VCSPDVVTYNT 121

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  KEG + KA  L  +M  +   PDVVT+NS+I   C A   + A+ L  +M+D G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN VT++ ++      G+ EEA+++   M   G+ P+   +N+ MD  C  GR   A 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM + G + N+ +Y IL++GY         +S ++ M   GI    + +  L    
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A  +  EMQ  G++ D + Y T I  LC+ G + +A++ F  +     + + 
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 306 RSYSCLIDGLCKSGRLKIAWEL-FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             Y  LI G C  G L  A EL +  +  G+   ++  +N ++H++C +G++  AH +F 
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++  G   D + FNTL+ G     E  K   +L  M
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM 458



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 201/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++   G  P+V+T++++IN LC+      A  L  +M++ NG       P+ V
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVD-NG-----VPPNKV 187

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G    G  ++A ++  +M  + + PD+V++NS +   C    S EA  +F  M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PN+VT+ +++      G   +       M   G+  N  V+  L+D +   G +
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M+  G   +VF+YS LI+  C+   +  A+  +++M+  G++P  V Y++L
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWA-YRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      + +A +L  EM  +G+     A + + +  +CK G +++A  +F  ++ + 
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI  ++ LIDG C  G +  A+ +  ++    +  D  TYN +++     G++D   
Sbjct: 428 ERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGL 487

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +LF +M  K + P  V +N ++ G  R   T    ++LH M
Sbjct: 488 NLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 161/347 (46%), Gaps = 38/347 (10%)

Query: 93  PDVVTYNSVIRGFCYA------------------------------------NDSNEAKR 116
           P + TY  V+ G C A                                       +  K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGV-RPNAFVYNTLMDG 174
           L   M + G  P+  ++++++  LC + + ++A  LL +M  + GV  P+   YNT++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   G++ +A  L+  M   G   +V +++ +IN  CK + ++ A  L  +M+  G+ P 
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTY ++  G   + + E A K+F EM   G+  D  ++ +F+D LCK+G   EA E+F 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           ++       +I +Y  L+ G    G        F+++    ++A+ + + I+I A    G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            MD+A  +  +M+ +G++PD   ++TL+    R    +  V+  ++M
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F  +K  G   ++I ++TLI+G C  G    A ++ + MI+          PD 
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG------IGPDT 467

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+++G  K G +D    L  +M DK I P  VTYN ++ G   A  +  A+++  E
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G   ++ T+++I+  LC+N   +EA  + + +  + V+ N    NT+++      R
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AK+LF ++   G   N  +Y I+I    K   +E A +++S M   G  P     N 
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647

Query: 241 LFIGLFEIHQVERA 254
               L E  ++ +A
Sbjct: 648 TIRTLLEKGEIVKA 661


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 208/409 (50%), Gaps = 20/409 (4%)

Query: 4   AALFTKLKAFG-----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF 52
           AAL  KL A G           C P+V+ Y+ ++ G C  G    A  L  EM       
Sbjct: 100 AALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM------- 152

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
               +PDA  Y T+I GLC  G    A  +L +M  +   PDVVTY  ++   C  +   
Sbjct: 153 --PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 210

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A +L  EM D+G  P++VT++V+++ +C+ G++++A + L+ +   G  PN   YN ++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   R   A+EL   M   GC  NV ++++LI+  C+   +E AL +  ++   G  
Sbjct: 271 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 330

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN L     +  ++++A    D M   G   D  +Y T +  LC++G +  A+EL
Sbjct: 331 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 390

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L+   C   + SY+ +IDGL K+G+ K A EL + +    L  D++TY+ +   LC 
Sbjct: 391 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 450

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +++ A   F  ++  G+ P+ V +N ++LG  +  ET   ++L   M
Sbjct: 451 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 499



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 191/369 (51%), Gaps = 6/369 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP+  TY+TLI GLC  G T  AL + +EM+         C PD V YT +++  CK   
Sbjct: 155 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSG 208

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A +LL +M+DK   PD+VTYN V+ G C     ++A      +   G +PN V++++
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   + E+A +L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N  SY+ L++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +V+ A 
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +++  G A    +Y T IDGL K G   EALEL   +     + DI +YS +  GL
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M   G  P+ 
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 508

Query: 376 VAFNTLMLG 384
             +  L+ G
Sbjct: 509 STYTILIEG 517



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  ++    C P+V+TY+ L+   C+      A+ L +EM +        C PD V 
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVT 230

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++G+C+EG VD A E L  +      P+ V+YN V++G C A    +A+ L  EM 
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 290

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVTF++++  LC+ G +E A ++LE + + G  PN+  YN L+  FC   +++
Sbjct: 291 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 350

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A      M S GC  ++ SY+ L+   C++ E++ A+ L  ++  KG  P +++YNT+ 
Sbjct: 351 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 410

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A +L +EM   G+  D   Y T   GLC+   I +A+  F  ++ +   
Sbjct: 411 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 470

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ +I GLCK      A +LF  +     + +  TY I+I  L  +G + +A DL
Sbjct: 471 PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 530

Query: 363 FLDMEAKGV 371
             ++ ++GV
Sbjct: 531 LDELCSRGV 539



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 14/388 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+  T + LI  L  +G T  A  +              C PD + Y  ++ G C  G 
Sbjct: 93  RPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMVAGYCGAGQ 141

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A+ L+ +M    + PD  TYN++IRG C    +  A  +  EM+ +   P+VVT+++
Sbjct: 142 LDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 198

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  CK    ++A +LL+ M   G  P+   YN +++G C  GRV+ A E   ++ S G
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ N  SY+I++ G C  +  E A  L  EM  KG  P VVT+N L   L     VE A 
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 318

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ +++ ++G   ++ +Y   +   CK   + +A+     +    C  DI SY+ L+  L
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+SG + +A EL H L        +++YN +I  L   GK  +A +L  +M +KG+ PD 
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++T+  G  R +     +    ++ +
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQD 466



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 184/336 (54%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A+EL+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM++A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++P ++TY+T+
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +    C
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y+ LI+GL   G +K A +L   L  RGV+
Sbjct: 505 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 173/336 (51%), Gaps = 14/336 (4%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G +D+A  L+   +     PD  T  ++I+    +  + EA+R+          P+
Sbjct: 75  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 125

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+ ++ ++   C  G+++ A +L+    ++ V P+A+ YNTL+ G C  GR   A  +  
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M    C  +V +Y+IL+   CK    + A+ L  EM  KG  P +VTYN +  G+ +  
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A +    +  +G   +T +Y   + GLC      +A EL   +    C  ++ +++
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD-MEA 368
            LI  LC+ G ++ A E+   +P+     + ++YN ++HA C   KMDKA   FLD M +
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVS 361

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G  PD V++NTL+    R+ E    VELLH++ ++
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 197/389 (50%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP+  TY+TLI GLC  G T  AL + +EM+         C PD V YT +++  CK   
Sbjct: 29  EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSG 82

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A +LL +M+DK   PD+VTYN V+ G C     ++A      +   G +PN V++++
Sbjct: 83  YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   + E+A +L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N  SY+ L++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +V+ A 
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +++  G A    +Y T IDGL K G   EALEL   +     + DI +YS +  GL
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M   G  P+ 
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  L+ G        +  +LL  +  R
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDELCSR 411



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 9/382 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y+ ++ G C  G    A  L  EM           +PDA  Y T+I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---------PVEPDAYTYNTLIRGLCGRGRTANA 51

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             +L +M  +   PDVVTY  ++   C  +   +A +L  EM D+G  P++VT++V+++ 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           +C+ G++++A + L+ +   G  PN   YN ++ G C   R   A+EL   M   GC  N
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+  C+   +E AL +  ++   G  P  ++YN L     +  ++++A    D
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M   G   D  +Y T +  LC++G +  A+EL   L+   C   + SY+ +IDGL K+G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           + K A EL + +    L  D++TY+ +   LC + +++ A   F  ++  G+ P+ V +N
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 351

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            ++LG  +  ET   ++L   M
Sbjct: 352 AIILGLCKRRETHSAIDLFAYM 373



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 191/361 (52%), Gaps = 6/361 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  ++    C P+V+TY+ L+   C+      A+ L +EM +        C PD V 
Sbjct: 51  ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVT 104

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++G+C+EG VD A E L  +      P+ V+YN V++G C A    +A+ L  EM 
Sbjct: 105 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 164

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVTF++++  LC+ G +E A ++LE + + G  PN+  YN L+  FC   +++
Sbjct: 165 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 224

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A      M S GC  ++ SY+ L+   C++ E++ A+ L  ++  KG  P +++YNT+ 
Sbjct: 225 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 284

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A +L +EM   G+  D   Y T   GLC+   I +A+  F  ++ +   
Sbjct: 285 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 344

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ +I GLCK      A +LF  +     + +  TY I+I  L  +G + +A DL
Sbjct: 345 PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 404

Query: 363 F 363
            
Sbjct: 405 L 405



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 178/341 (52%), Gaps = 3/341 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ G C  G +D A+ L+ +M    + PD  TYN++IRG C    +  A  +  EM+
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   P+VVT++++++  CK    ++A +LL+ M   G  P+   YN +++G C  GRV+
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E   ++ S GC+ N  SY+I++ G C  +  E A  L  EM  KG  P VVT+N L 
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L     VE A ++ +++ ++G   ++ +Y   +   CK   + +A+     +    C 
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI SY+ L+  LC+SG + +A EL H L        +++YN +I  L   GK  +A +L
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +M +KG+ PD + ++T+  G  R +     +    ++ +
Sbjct: 300 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 340



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 85  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 138

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A+EL+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM++A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++P ++TY+T+
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +    C
Sbjct: 319 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 378

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             +  +Y+ LI+GL   G +K A +L   L
Sbjct: 379 MPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 143/274 (52%), Gaps = 3/274 (1%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           + ++ ++   C  G+++ A +L+    ++ V P+A+ YNTL+ G C  GR   A  +   
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M    C  +V +Y+IL+   CK    + A+ L  EM  KG  P +VTYN +  G+ +  +
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+ A +    +  +G   +T +Y   + GLC      +A EL   +    C  ++ +++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G ++ A E+   +P+     + ++YN ++HA C   KMDKA      M ++G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             PD V++NTL+    R+ E    VELLH++ ++
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 211/413 (51%), Gaps = 17/413 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +++    P++ TY+T+I+GLC++G+   A  L EEMI   G+      PD V
Sbjct: 115 QAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGK----SAPDIV 170

Query: 62  IYTTIID-GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y T+I+ G+CK+G V++A E+L  MK     PDV+TYNS+I   C A    EA  +   
Sbjct: 171 TYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKT 230

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P++VTF+ ++D  CK G +  A ++LE M +  + P+   Y  L++G C  G+
Sbjct: 231 M---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 287

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE---------GALSLYSEMLSKGI 231
           V  A  L   +   G   +V +Y+ L++G CK+ EIE          A  + +EM+S  +
Sbjct: 288 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINM 347

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P + TYN +  GL +   + +A  L  ++   G   D   Y T IDGLCK   + EA +
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 407

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +  L C  +  +   ++ GLC+ GR+  AW L   + R     +VV Y  +I  LC
Sbjct: 408 LADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 467

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              +MD A  +   M  +GVA D  A+  L++  I     ++ + +   M  R
Sbjct: 468 KSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVAR 520



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 21/411 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      L  F   P+V  ++ LI+GL + G+   A+ LFE M +          PD   
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR------VNPDIFT 134

Query: 63  YTTIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIR-GFCYANDSNEAKRLFI 119
           Y T+I GLCK G ++KA+ELL +M  +     PD+VTYN++I  G C   D  EA  +  
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILD 194

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M   G  P+V+T++ I+  LC  G++ EA+++L+ M      P+   +NTL+DGFC  G
Sbjct: 195 GMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAG 251

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            + RA E+   M       +V +Y+IL+NG C+  +++ A  L  E++ +G  P V+ Y 
Sbjct: 252 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYT 311

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADT---------WAYRTFIDGLCKNGYIVEAL 290
           +L  GL +  ++E A KL  EM    + A+          + Y   + GL K+G I +A+
Sbjct: 312 SLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 371

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L   L       D+ +Y+ LIDGLCK+ R++ A +L   +       + VT   ++  L
Sbjct: 372 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGL 431

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C  G++D A  L ++M  K  AP+ V + +L+ G  +++       +L  M
Sbjct: 432 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAM 482



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 219/443 (49%), Gaps = 60/443 (13%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + +V +Y+ L++ L ++GH      +++++++        C P+ V +  +I G CK 
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG------CSPNLVTFKILIRGNCKA 75

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A E L  + + ++ PDV  +N +I G     + ++A +LF  M    V P++ T+
Sbjct: 76  GQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTY 135

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVR------------------------------- 162
           + ++  LCK+G +E+A +LLE MI+ G +                               
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDG 195

Query: 163 -------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                  P+   YN+++   C+ GRV  A E+   +++M C  ++ +++ L++G+CK   
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGM 252

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL +  EM  + I P V+TY  L  GL  + QV+ AF L +E+ R G   D  AY +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312

Query: 276 FIDGLCKNGYIVEALELFRTL--RILKCEL-------DIRSYSCLIDGLCKSGRLKIAWE 326
            +DGLCK+G I EA +L + +  R +  E+        + +Y+ ++ GL K G +  A  
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   L     + DVVTYN +I  LC   ++ +A DL  +M + G  P+ V   +++ G  
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLC 432

Query: 387 R----NNETSKVVELLHRMDERN 405
           R    ++  S VVE+  +    N
Sbjct: 433 RVGRVDDAWSLVVEMSRKRHAPN 455



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 177/345 (51%), Gaps = 19/345 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +K  G  P+VITY+++I+ LC  G  + A  + + M          C PD V
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---------SCSPDLV 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++DG CK G + +A E+L +M  +NI PDV+TY  ++ G C       A  L  E+
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQL---------LELMIQIGVRPNAFVYNTLM 172
           + QG  P+V+ ++ ++D LCK+G++EEA +L         L  M+ I + P  F YN ++
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G    G +++A  L   + + G   +V +Y+ LI+G CK   +  A  L  EM S G  
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VT  ++  GL  + +V+ A+ L  EM R   A +   Y + IDGLCK+  + +A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
              +R     LD  +Y  LI  +   GR+  A  ++  +  RG L
Sbjct: 479 LDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFL 523



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 15/276 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+VITY+ L+NGLCR G   VA  L EE++      G +  PD + YT+++DGLCK G +
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDGLCKSGEI 323

Query: 77  DKA---------KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           ++A         +E+L +M   N+ P + TYN V+ G       ++A  L  +++ +G  
Sbjct: 324 EEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 383

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+VVT++ ++D LCK  ++ EA  L + M  +G  PN     +++ G C  GRV+ A  L
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSL 443

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
            V M       NV  Y+ LI+G CK+  ++ A  +   M  +G+      Y  L + +  
Sbjct: 444 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIH 503

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             +V  A  ++DEM   G   D    +T  +    N
Sbjct: 504 GGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 6/251 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + +   YN L+D    +G   R  +++  +   GC  N+ ++ ILI G CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL     +    + P V  +N L  GLF+    ++A KLF+ M+   V  D + Y T I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 278 DGLCKNGYIVEALELFRTL--RILKCELDIRSYSCLID-GLCKSGRLKIAWELFHSLPRG 334
            GLCK+G + +A EL   +  R  K   DI +Y+ LI+ G+CK G ++ A E+   +   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               DV+TYN +IHALC  G++ +A ++   M     +PD V FNTL+ G  +     + 
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRA 256

Query: 395 VELLHRMDERN 405
           +E+L  M   N
Sbjct: 257 LEVLEEMCREN 267



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 3/213 (1%)

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E  G KH+V SY+ L++   K+        +Y ++L  G  P +VT+  L  G  +  Q 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            RA +    +    VA D + +   I GL K+G   +A++LF  +   +   DI +Y+ +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 312 IDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHA-LCADGKMDKAHDLFLDMEA 368
           I GLCKSG L+ A EL   + R  G    D+VTYN +I+A +C DG +++A ++   M+ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G APD + +N+++          +  E+L  M
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 254 AFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A + FD   ++ G   D  +Y   +D L K+G+     ++++ L    C  ++ ++  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G CK+G+   A E   +L    +  DV  +N +IH L  DG  D+A  LF +ME+  V 
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           PD   +NT++ G  ++    K  ELL  M  R
Sbjct: 130 PDIFTYNTVISGLCKSGNLEKARELLEEMIRR 161



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ + GC PN +T  +++ GLCR G    A +L  EM            P+ V
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH------APNVV 457

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++IDGLCK   +D A  +L  M+ + +  D   Y  +I    +     EA  ++ EM
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME 147
           + +G  P+  T   + +    N   E
Sbjct: 518 VARGFLPDGSTSKTLEEAAMSNSVFE 543


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 209/408 (51%), Gaps = 12/408 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G + NV+TY+ +I G+ + G    A++LF EM+    E      PD  
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE------PDTW 417

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +IDG  K   + KA ELL +MK + + P   TY+ +I G C+++D  +A  +  +M
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PNV  +  ++    +  + E A +LL++MI  GV P+ F YN L+ G C   +V
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK L V M   G K N  +Y   IN Y K+ EI+ A   + +MLS GI P  V Y  L
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++     A   F  M   G+  D  AY   I  L KNG   EA+ +F  L+ LK 
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKT 655

Query: 302 EL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI--HALCADGKMD 357
            +  D+  Y+ LI G CK G ++ A +L+  +    +  ++V YN +I  +  C  G + 
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A  LF +M +KG++PD   +  L+ GC +     K + L H   +++
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 763



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 215/440 (48%), Gaps = 44/440 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++KA    P+  TYS LI+GLC +     A  + ++MI  NG      KP+  
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG-----VKPNVF 487

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I    +E   + A ELL  M    + PD+  YN +I G C A    EAK L ++M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
            ++G++PN  T+   ++   K+G+++ A +  + M+  G+ PN  +Y  L+ G C     
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 177 ------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           G+   A  +F+     G   +VF Y+ L
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF--IGLFEIHQVERAFKLFDEMQRH 264
           I+G+CK  +IE A  LY EML  GI P +V YNTL    G  +   +  AFKLFDEM   
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G++ D + Y   IDG  K G + +AL LF   +  K    + +++ LID  CK G++  A
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEA 786

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ELF  +    L  ++VTY I+I A      M++A  LFLDME + + P+ + + +L+L 
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846

Query: 385 CIRNNETSKVVELLHRMDER 404
             +     K++ L   M+ R
Sbjct: 847 YNQIGNRFKMISLFKDMEAR 866



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 210/400 (52%), Gaps = 9/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   + A G  P++  Y+ LI GLCR      A  L  +M    GE G+  KP+A  
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM----GEKGI--KPNAHT 558

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   I+   K G +  A+     M    I P+ V Y  +I+G C   ++ EA   F  M+
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P++  +S I+  L KNGK +EA  +    ++ GV P+ F+YN+L+ GFC  G + 
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 183 RAKELFVSMESMGCKHNVFSYSILIN--GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +A +L+  M   G   N+  Y+ LIN  GYCK+  +  A  L+ EM+SKGI P    Y  
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   +E+A  LF E Q+  V + + A+ + ID  CK+G ++EA ELF  +   K
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +I +Y+ LID   K+  ++ A +LF  +    +I + +TY  ++ +    G   K  
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            LF DMEA+G+A D +A+  +     +  ++ + ++LL++
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 205/422 (48%), Gaps = 41/422 (9%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+PN+ TY+  I GLC+TG    AL + + M+    E G+   PD   YT ++DG CK+ 
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGHTYTLLVDGFCKQK 325

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
              +AK +   M    +NP+  TY ++I GF    +  EA R+  EM+ +G++ NVVT++
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  + K G+M +A  L   M+  G+ P+ + YN L+DG+  +  + +A EL   M++ 
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               + F+YS+LI+G C + +++ A  +  +M+  G+KP V  Y TL     +  + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L   M  +GV  D + Y   I GLC+   + EA  L   +     + +  +Y   I+ 
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565

Query: 315 LCKSGRLKIAWELFHSL------PRGV-----------------------------LIAD 339
             KSG +++A   F  +      P  V                             LI D
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +  Y+ +IH+L  +GK  +A  +FL     GV PD   +N+L+ G  +  +  K  +L  
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685

Query: 400 RM 401
            M
Sbjct: 686 EM 687



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 174/320 (54%), Gaps = 1/320 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            M +  I PDV TY +VI+  C   D  + K +  EM ++  +PN+ T++  +  LC+ G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            ++EA ++ +LM++ G+ P+   Y  L+DGFC   R   AK +F SM S G   N F+Y+
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G+ K   IE AL +  EM+++G+K  VVTYN +  G+ +  ++ +A  LF+EM   
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  DTW Y   IDG  K+  + +A EL   ++  K      +YS LI GLC S  L+ A
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            E+   + R  +  +V  Y  +I A   + + + A +L   M A GV PD   +N L++G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 385 CIRNNETSKVVELLHRMDER 404
             R  +  +   LL  M E+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEK 550



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 202/408 (49%), Gaps = 49/408 (12%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  TY+ L++G C+   +  A  +FE M +          P+   YT +IDG  KE
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG------LNPNRFTYTALIDGFIKE 359

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV--- 130
           G +++A  +  +M  + +  +VVTYN++I G   A +  +A  LF EM+  G++P+    
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTY 419

Query: 131 --------------------------------VTFSVIMDELCKNGKMEEASQLLELMIQ 158
                                            T+SV++  LC +  +++A+++L+ MI+
Sbjct: 420 NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 479

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV+PN F+Y TL+  +    R   A EL   M + G   ++F Y+ LI G C+ K++E 
Sbjct: 480 NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 539

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF----EIHQVERAFKLFDEMQRHGVAADTWAYR 274
           A  L  +M  KGIKP   TY   FI L+    EI   ER FK   +M   G+  +   Y 
Sbjct: 540 AKMLLVDMGEKGIKPNAHTYGA-FINLYSKSGEIQVAERYFK---DMLSSGIVPNNVIYT 595

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             I G C  G  VEAL  F+ +       DIR+YS +I  L K+G+ K A  +F    + 
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            ++ DV  YN +I   C +G ++KA  L+ +M   G+ P+ V +NTL+
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 188/368 (51%), Gaps = 7/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY+ +I   C+ G  I    +  EM          CKP+   Y   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A E+   M +K + PD  TY  ++ GFC    S EAK +F  M   G+ PN  T++ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D   K G +EEA ++ + MI  G++ N   YN ++ G    G + +A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + + ++Y++LI+GY K+ ++  A  L +EM ++ + P+  TY+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D+M R+GV  + + Y T I    +      A+EL + +       D+  Y+CLI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           ++ +++ A  L   +    +  +  TY   I+     G++  A   F DM + G+ P+ V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 377 AFNTLMLG 384
            +  L+ G
Sbjct: 593 IYTILIKG 600



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 43/432 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F  + + G  PN + Y+ LI G C  G+T+ AL+ F+ M+    E G++  PD   
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML----EKGLI--PDIRA 628

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ II  L K G   +A  + L+     + PDV  YNS+I GFC   D  +A +L+ EM+
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 123 DQGVQPNVVTFSVIMDEL--CKNGKMEEASQLLELMIQIGVRPNAFVY------------ 168
             G+ PN+V ++ ++++   CK+G + EA +L + MI  G+ P+ ++Y            
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 169 ----------------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                 N+L+D FC  G+V  A+ELF  M       N+ +Y+IL
Sbjct: 749 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ Y K + +E A  L+ +M ++ I P  +TY +L +   +I    +   LF +M+  G+
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A D  AY       CK G  +EAL+L     +   +L+   +  LI  LCK  ++    E
Sbjct: 869 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   + +  L     T N ++      G  D+A  +   M+  G  P  ++  T  +   
Sbjct: 929 LLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL-TDSISTG 987

Query: 387 RNNETSKVVELL 398
           R++  S + ++L
Sbjct: 988 RDDMKSDISQVL 999



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 10/179 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  ++     PN +TY++L+    + G+    ++LF++M       G+ C  DA+
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM----EARGIAC--DAI 873

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +    CKEG   +A +LL +   + I  +   ++++I   C     +    L  EM
Sbjct: 874 AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + +  +  T + ++    K+G  +EAS++L +M ++G  P +    +L D    TGR
Sbjct: 934 GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL---SLTDSIS-TGR 988


>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 201/354 (56%), Gaps = 6/354 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+   G EP+++T S+L+NG C +     A+ +  +M     + G+  K D V+ T +ID
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM----EKMGI--KRDVVVDTILID 56

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK   V  A E+L +MKD+ I+P+VVTY+S+I G C +    +A+R   EM  + + P
Sbjct: 57  TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+TFS ++D   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV+ A ++ 
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+    V+ NTL  G F+ 
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +++ A  +F  M  +G+  +  +Y   + GL  NG + +AL  F  ++  + +LDI +Y
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           + +I G+CK+  +K A++LF+ L    +  D   Y IMI  L   G   +A  L
Sbjct: 297 TIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 177/328 (53%), Gaps = 1/328 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +PD V  +++++G C    +  A  +  QM+   I  DVV    +I   C       A  
Sbjct: 10  EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +   M D+G+ PNVVT+S ++  LCK+G++ +A + L  M    + PN   ++ L+D + 
Sbjct: 70  VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G++++   ++  M  M    NVF+YS LI G C +  ++ A+ +   M+SKG  P VV
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY+TL  G F+  +V+   KL D+M + GVAA+T +  T I G  + G I  AL +F  +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  +IRSY+ ++ GL  +G ++ A   F  + +     D++TY IMIH +C    +
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +A+DLF  ++ K V PD  A+ T+M+ 
Sbjct: 310 KEAYDLFYKLKFKRVEPDFKAY-TIMIA 336



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 6/294 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++K  G  PNV+TYS+LI GLC++G    A     EM +          P+ 
Sbjct: 65  VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 118

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + ++ +ID   K G + K   +   M   +I+P+V TY+S+I G C  N  +EA ++   
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVVT+S + +   K+ ++++  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M        ++TY  
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 143/286 (50%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            ++MM  G++P++VT S +++  C +  +++A  +   M ++G++ +  V   L+D  C 
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              V  A E+   M+  G   NV +YS LI G CK+  +  A     EM SK I P V+T
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           ++ L     +  ++ +   ++  M +  +  + + Y + I GLC +  + EA+++   + 
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  ++ +YS L +G  KS R+    +L   +P+  + A+ V+ N +I      GK+D
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +F  M + G+ P+  ++N ++ G   N E  K +     M +
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 110/217 (50%)

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
            + M  +G + ++ + S L+NG+C +  I+ A+ +  +M   GIK  VV    L   L +
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              V  A ++   M+  G++ +   Y + I GLCK+G + +A      +   K   ++ +
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           +S LID   K G+L     ++  + +  +  +V TY+ +I+ LC   ++D+A  +   M 
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +KG  P+ V ++TL  G  +++     ++LL  M +R
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 202/380 (53%), Gaps = 7/380 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y  LI+ LC+ G+   A  L   M           K  A+ Y+TII+ LCK   V++A+E
Sbjct: 48  YGILISCLCKVGNFDEAYKLLHTMRLKR------FKRKAIAYSTIINWLCKLNRVEEARE 101

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L+ +M  +   PD +TY  ++   C     ++A     EM  +G++P+   ++ ++  LC
Sbjct: 102 LIEKMA-RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLC 160

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           +  K+EEA  L E M++  + PN   YNTL++G C   R+  A ELF  M   G      
Sbjct: 161 QEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV 220

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+ LI+G+CK K++  A  ++ +M+     P VVTY TL  GL +  +V+ A ++ D M
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 280

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + GV  +   Y   IDG CK   + EA +L   +        + +Y+ L++ LC++ +L
Sbjct: 281 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 340

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A++LF  + +      VVTYN ++ ALC   ++D AH L+ +M AKG  PD + ++TL
Sbjct: 341 EDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400

Query: 382 MLGCIRNNETSKVVELLHRM 401
             G  R  +  +  EL+ +M
Sbjct: 401 AWGLTRAGKVHEAQELMEKM 420



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 9/359 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK F  +   I YST+IN LC+      A  L E+M            PDA+ Y  I++
Sbjct: 72  RLKRF--KRKAIAYSTIINWLCKLNRVEEARELIEKMAR-------YAPPDALTYGPIVE 122

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK   +D A   + +M  + I PD   YN V+ G C      EA+ LF +M+ Q + P
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++ +++ LCK  ++E A +L + M   G  P    YNTL+DGFC    +  AK++F
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M    C  NV +Y+ LI+G  K+ +++ A  +   M+ KG+ P V TY+ L  G  ++
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +V+ A KL ++M   G+A     Y   ++ LC+   + +A +LFR +   +C   + +Y
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           + L+  LC   +L  A  L+  +       D +TY+ +   L   GK+ +A +L   M+
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 183/348 (52%), Gaps = 1/348 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P A  + T+ DG  K G +++ KE+   M +         Y  +I   C   + +EA +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  +  +   + +S I++ LCK  ++EEA +L+E M +    P+A  Y  +++  C 
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCK 126

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           T R++ A      M + G K + F Y+ +++G C+ +++E A  L+ +M+ + I P VVT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  GL +  ++E A++LF EM   G      +Y T IDG CK   +V A ++F  + 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  ++ +Y+ LIDGL KSG+++ A E+   + +  +  +V TY+ +I   C   ++D
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +AH L   M  +G+AP  V +N L+    R ++     +L   M +R 
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 6/299 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++   G +P+   Y+ +++GLC+      A  LFE+M+           P+ V
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR------INPNVV 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+GLCK   ++ A EL  +M  K   P  V+YN++I GFC   D   AK +F +M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVVT++ ++D L K+GK++ A+++L+ M++ GV PN   Y+ L+DGFC   RV
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M + G    V +Y+IL+N  C+  ++E A  L+  M  +   PTVVTYNTL
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              L    Q++ A +L+ EM   G   D   Y T   GL + G + EA EL   +++ K
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 1/245 (0%)

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V P A  +NT+ DGF   GR+ + KE++  M   G       Y ILI+  CK    + A 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L   M  K  K   + Y+T+   L ++++VE A +L ++M R+    D   Y   ++ L
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERL 124

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   I +AL     +     + D   Y+ ++ GLC+  +++ A  LF  + +  +  +V
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTYN +I+ LC   +++ A++LF +M  KG  P  V++NTL+ G  +  +     ++  +
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 401 MDERN 405
           M   N
Sbjct: 245 MVRSN 249



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 1/176 (0%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  + + P   T+NT+  G  +  ++E+  +++  M   G       Y   I  LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             EA +L  T+R+ + +    +YS +I+ LCK  R++ A EL   + R     D +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGP 119

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++  LC   ++D A     +M  +G+ PD   +N ++ G  +  +  +   L  +M
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 175



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +    C P V+TY+TL+  LC       A  L+ EMI         C PDA+
Sbjct: 342 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG------CPPDAI 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            Y T+  GL + G V +A+EL+ +MK    NP
Sbjct: 396 TYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 203/361 (56%), Gaps = 6/361 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +   K+   G EP+++T S+L+NG C +     A+ +  +M     + G+  K D V
Sbjct: 66  SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM----EKMGI--KRDVV 119

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + T +ID LCK   V  A E+L +MKD+ I+P+VVTY+S+I G C +    +A+R   EM
Sbjct: 120 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 179

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV+TFS ++D   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV
Sbjct: 180 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 239

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+    V+ NTL
Sbjct: 240 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 299

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  +++ A  +F  M  +G+  +  +Y   + GL  NG + +AL  F  ++  + 
Sbjct: 300 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 359

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI +Y+ +I G+CK+  +K A++LF+ L    +  D   Y IMI  L   G   +A  
Sbjct: 360 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 419

Query: 362 L 362
           L
Sbjct: 420 L 420



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++ T + L+N  CR      AL+   +M+    + G+  +PD V  +++++G C    
Sbjct: 45  SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 98

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A  +  QM+   I  DVV    +I   C       A  +   M D+G+ PNVVT+S 
Sbjct: 99  IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 158

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LCK+G++ +A + L  M    + PN   ++ L+D +   G++++   ++  M  M 
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 218

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NVF+YS LI G C +  ++ A+ +   M+SKG  P VVTY+TL  G F+  +V+   
Sbjct: 219 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 278

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           KL D+M + GVAA+T +  T I G  + G I  AL +F  +       +IRSY+ ++ GL
Sbjct: 279 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 338

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
             +G ++ A   F  + +     D++TY IMIH +C    + +A+DLF  ++ K V PD 
Sbjct: 339 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 398

Query: 376 VAFNTLMLG 384
            A+ T+M+ 
Sbjct: 399 KAY-TIMIA 406



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 6/294 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++K  G  PNV+TYS+LI GLC++G    A     EM +          P+ 
Sbjct: 135 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 188

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + ++ +ID   K G + K   +   M   +I+P+V TY+S+I G C  N  +EA ++   
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVVT+S + +   K+ ++++  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 249 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M        ++TY  
Sbjct: 309 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 369 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 422



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 168/349 (48%), Gaps = 3/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEA 114
           P  V +  ++  + K    D    L  ++++     I+PD+ T N ++  FC     + A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                +MM  G++P++VT S +++  C +  +++A  +   M ++G++ +  V   L+D 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C    V  A E+   M+  G   NV +YS LI G CK+  +  A     EM SK I P 
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V+T++ L     +  ++ +   ++  M +  +  + + Y + I GLC +  + EA+++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  ++ +YS L +G  KS R+    +L   +P+  + A+ V+ N +I      G
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           K+D A  +F  M + G+ P+  ++N ++ G   N E  K +     M +
Sbjct: 308 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 356



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQL---LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           P++V F+ ++  + K    +    L   +E    I + P+ +  N L++ FC   + + A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
                 M  +G + ++ + S L+NG+C +  I+ A+ +  +M   GIK  VV    L   
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   V  A ++   M+  G++ +   Y + I GLCK+G + +A      +   K   +
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + ++S LID   K G+L     ++  + +  +  +V TY+ +I+ LC   ++D+A  +  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M +KG  P+ V ++TL  G  +++     ++LL  M +R
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 287


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+   +   GC P+V+TY+ L+   C+      A+ L +EM +        C PD V 
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG------CAPDIVT 224

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++G+C+EG VD A E L  +      P+ V+YN V++G C A    +A++L  EM 
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVTF++++  LC+ G +E A ++L+ + + G  PN+  YN ++  FC   +++
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMD 344

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA      M S GC  ++ SY+ L+   C+  E++ A+ L  ++  KG  P +++YNT+ 
Sbjct: 345 RAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 404

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + E A +L +EM   G+  D   Y T   GLC+ G I EA++ F  ++ +   
Sbjct: 405 DGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIR 464

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ ++ GLCK      A +LF  +     + +  TY I+I  L  +G + +A ++
Sbjct: 465 PNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREM 524

Query: 363 FLDMEAKGV 371
             ++ ++GV
Sbjct: 525 MAELCSRGV 533



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           + A   EP+  TY+TLI GLC  G T  AL + ++M+         C PD V YT +++ 
Sbjct: 143 VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG------CVPDVVTYTILLEA 196

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            CK     +A +LL +M+DK   PD+VTYN V+ G C     ++A      +   G +PN
Sbjct: 197 TCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPN 256

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            V++++++  LC   + E+A +L+  M + G  PN   +N L+   C  G V  A E+  
Sbjct: 257 TVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILD 316

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            +   GC  N  SY+ +++ +CK K+++ A++    M+S G  P +V+YNTL   L    
Sbjct: 317 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGG 376

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A +L  +++  G      +Y T IDGL K G   EALEL   +     + DI +YS
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYS 436

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +  GLC+ GR++ A + F  +    +  + V YN ++  LC       A DLF  M + 
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496

Query: 370 GVAPDCVAFNTLMLG 384
           G  P+   +  L+ G
Sbjct: 497 GCMPNESTYTILIEG 511



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 208/409 (50%), Gaps = 20/409 (4%)

Query: 4   AALFTKLKAFG-----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF 52
           AAL  KL A G           CEP+V++Y+ ++ G C TG    A  L   M       
Sbjct: 94  AALIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM------- 146

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
               +PD   Y T+I GLC  G  D A  +L  M  +   PDVVTY  ++   C  +   
Sbjct: 147 --PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYK 204

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A +L  EM D+G  P++VT++V+++ +C+ G++++A + L+ +   G  PN   YN ++
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   R   A++L   M   G   NV ++++LI+  C+   +E A+ +  ++   G  
Sbjct: 265 KGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN +     +  +++RA    + M   G   D  +Y T +  LC+ G +  A+EL
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L+   C   + SY+ +IDGL K+G+ + A EL + +    L  D++TY+ +   LC 
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +G++++A   F  ++  G+ P+ V +N ++LG  +   T   ++L   M
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYM 493



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPS----YG--CEPNTV 258

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A++L+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ I+   CK  KM+ A   +ELM+  G  P+   YNTL+   C  G V
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + E AL L +EM++KG++P ++TY+T+
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A K F ++Q  G+  +T  Y   + GLCK      A++LF  +    C
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV 341
             +  +Y+ LI+GL   G +K A E+   L  RGV+   +V
Sbjct: 499 MPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLV 539



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F K++  G  PN + Y+ ++ GLC+   T  A++LF  M++ NG     C P+  
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVS-NG-----CMPNES 503

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
            YT +I+GL  EG V +A+E++ ++  + +    +     IR
Sbjct: 504 TYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 29/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA   F  + A G + N+I+YSTL++G    G  +   NLF  M+               
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  + G+V                PD + Y  +I   C+ G +D A +    M DK + 
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+   Y  +I+GFC   D  +A+ L  E+ ++G+ P +++F+ +++ LCK G++ EA ++
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +++I+ G + +  ++ +L+DG+CL G+++ A  +  +M S+G + ++ +Y  L+NG CK
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  I+  L L+ E+L KG+KPT  TY  +  GLF   +   A ++F EM   G+A     
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + GLC+N    EA+ +F+ L  +  + DI   + +I  + K+ R + A  LF S+P
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIP 693

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+  V TY IM+  L  +G +++A  +F  M   G++P     N ++   +   E  
Sbjct: 694 DYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIV 753

Query: 393 KVVELLHRMDERN 405
           K    + R+D ++
Sbjct: 754 KAGIYMCRVDGKS 766



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 209/425 (49%), Gaps = 41/425 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC  NV+ YST+++GL + G    A +LF EM     + GV   P+ V Y ++I  LCK 
Sbjct: 206 GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMT----QQGV--PPNVVTYNSVIHALCKA 259

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VDKA+ +L QM    + PD VTYN++I G+       +A R+F EM  +GV PN VT 
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 134 SVIMDELCKNGKMEEA-----------------------------------SQLLELMIQ 158
           S  +  LCK+G++EEA                                   S L  LM++
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN  V+N L++G+   G V  A  +F  M+  G   +V +Y  +I+ +C+   ++ 
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+  ++ M+ KG++P    Y  L  G      + +A +L  E++  G+     ++ + I+
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            LCK G + EA  +F  +     + D+  ++ LIDG C  G++  A+ +  ++    +  
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEP 559

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+VTY  +++  C +G++D    LF ++  KGV P    +  ++ G      T+   E+ 
Sbjct: 560 DIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMF 619

Query: 399 HRMDE 403
             M E
Sbjct: 620 QEMIE 624



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 213/434 (49%), Gaps = 43/434 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++   GC P+ I+YST++  +C  G +  AL++    +   G     C  + V+Y+T
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGG----CPCNVVVYST 216

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GL KEG V +A +L  +M  + + P+VVTYNSVI   C A   ++A+ +  +M+  G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           VQP+ VT++ ++      G+ ++A ++ + M   GV PN    +T +   C  GR+  A+
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336

Query: 186 ELFVSMESMGCKHNVFSYS-----------------------------------ILINGY 210
           E F SM + G K N+ SYS                                   IL+NGY
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K   +  A+ ++ +M  +G+ P V+TY  +      +  ++ A   F+ M   GV  + 
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y+  I G C +G +V+A EL   +R       I S++ LI+ LCK GR+  A  +F  
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDM 516

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R    ADV  +  +I   C  GKM +A  +   M + G+ PD V + TL+ GC +N  
Sbjct: 517 IIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGR 576

Query: 391 TSKVV----ELLHR 400
               +    ELLH+
Sbjct: 577 IDDGLILFRELLHK 590



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 197/407 (48%), Gaps = 40/407 (9%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           +A+ LF  M  G G    V  P    Y+ +ID  C+   +D A      +  + +  DV+
Sbjct: 82  LAVALFNRMSTGTGP--RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 97  TYNSVIRGFCYANDSNEA-KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
             +S++RG C A  ++EA   LF  M + G  P+ +++S ++  +C +G+ + A  +L +
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 156 MI-QIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
            + Q G  P N  VY+T++ G    G+V  A +LF  M   G   NV +Y+ +I+  CK 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A  +  +M+  G++P  VTYNTL  G   + Q ++A ++F EM   GV  +T   
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS----------CLID---------- 313
            TF+  LCK+G I EA E F ++     +L+I SYS          CL+D          
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 314 ---------------GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                          G  K G ++ A  +F  + +  L  DV+TY  +IHA C  G MD 
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A D F  M  KGV P+   +  L+ G   + +  K  EL++ +  + 
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  +++  G  P ++++++LIN LC+ G    A  +F +MI   GE     K D 
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF-DMIIRTGE-----KADV 526

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            I+T++IDG C  G + +A  +   M    I PD+VTY +++ G C     ++   LF E
Sbjct: 527 NIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRE 586

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +GV+P   T+ +I+D L   G+   A ++ + MI+ G+      Y+ L+ G C    
Sbjct: 587 LLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC 646

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  +F  + +M  K ++   +I+I+   K +  E A  L++ +   G+ PTV TY  
Sbjct: 647 TEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTI 706

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  M + G++  +      +  L + G IV+A
Sbjct: 707 MMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 116/328 (35%), Positives = 184/328 (56%), Gaps = 16/328 (4%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           G + +P+ V+Y TIID +CK+   + A +L  +M  K I PDV TYN++I GFC      
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A  LF +M  + + P+V TF++++D  CK G+++EA   L +M++ G++P+   YN+LM
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D +CL   VN+AK +F +M   G   NV SYSI+IN +CK K ++ A+ L+ EM  K I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEM----------------QRHGVAADTWAYRTF 276
           P V+TY++L  GL +  ++  A +L DEM                +  G+  + + Y   
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDGLCK G + +A  +F  L +    + + +Y+ +I G C  G    A  L   +     
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFL 364
           I + VTY I+I +L  + + DKA + F+
Sbjct: 534 IPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 18/330 (5%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +LL ++  K + P++V YN++I   C     N+A  L+ EM+ + + P+V T++ +++  
Sbjct: 227 QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  GK+++A  L   M    + P+ + +N L+D FC  GRV  AK     M   G K +V
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L++ YC   E+  A S+++ M  +G+   V +Y+ +     +I  V++A KLF E
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALE----------------LFRTLRILKCELD 304
           M    +  +   Y + IDGLCK+G I  ALE                L R L+      +
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPN 466

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           + +Y+ LIDGLCK GRL+ A  +F   L +G  I  V TY +MIH  C  G  D+A  L 
Sbjct: 467 MFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNIT-VNTYTVMIHGFCNKGLFDEAMTLL 525

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             M+     P+ V +  ++     N+E  K
Sbjct: 526 SKMKDNCCIPNAVTYEIIIRSLFDNDENDK 555



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++ +    P+V TY+ LING C  G    A+ LF +M + N        PD  
Sbjct: 259 DAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSEN------INPDVY 312

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++D  CKEG V +AK  L  M  + I PDVVTYNS++  +C  N+ N+AK +F  M
Sbjct: 313 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTM 372

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  NV ++S++++  CK   +++A +L + M    + PN   Y++L+DG C +GR+
Sbjct: 373 SHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRI 432

Query: 182 NRAKELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           + A EL   M                +  G + N+F+Y+ILI+G CK   +E A +++ +
Sbjct: 433 SYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFED 492

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +L KG   TV TY  +  G       + A  L  +M+ +    +   Y   I  L  N  
Sbjct: 493 LLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDE 552

Query: 286 IVEALELF 293
             +A   F
Sbjct: 553 NDKAENFF 560



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 109/208 (52%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + N+  Y+ +I+  CK+K    A  LYSEM+SK I P V TYN L  G   + +++ A  
Sbjct: 238 QPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIG 297

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF++M    +  D + +   +D  CK G + EA      +     + D+ +Y+ L+D  C
Sbjct: 298 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYC 357

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
               +  A  +F+++    + A+V +Y+IMI+  C    +D+A  LF +M  K + P+ +
Sbjct: 358 LVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVI 417

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +++L+ G  ++   S  +EL   M +R
Sbjct: 418 TYSSLIDGLCKSGRISYALELNDEMHDR 445



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +LK  G  PN+ TY+ LI+GLC+ G    A N+FE+++       V        YT
Sbjct: 453 TLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNT------YT 506

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +I G C +G  D+A  LL +MKD    P+ VTY  +IR     +++++A+  F++
Sbjct: 507 VMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 227/445 (51%), Gaps = 48/445 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++K  G  P+V T++  I   CRT   + AL L   M +        C+ +AV
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG------CELNAV 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I G  +E +  +A EL  +M    I P + T+N ++   C      E ++L  ++
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKME-------EASQLLELMIQIGVRPNAFVYNTLMDG 174
           +  GV PN+ TF++ +  LC+ G +E       EA   L  M+  G+ P+ F YNT++ G
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G++  A  +    +  G   + F+Y  LI G C++ +I+ AL+L+ E L KG+KP+
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-- 292
           +V YNTL  GL +   V +A +L ++M + G++ D W Y   I+GLCK G + +A  L  
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422

Query: 293 -------------FRTLRILKCEL--------------------DIRSYSCLIDGLCKSG 319
                        F TL    C+                     D+ +Y+ +++GLCK+ 
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           + +   E F  +     + +++TYNI+I +LC   K+ +A DL  ++  +G+ PD V+F 
Sbjct: 483 KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFG 542

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           T++ G   N +  +  +L  RM+++
Sbjct: 543 TVISGFCNNGDLDEAYQLFRRMEQQ 567



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 214/412 (51%), Gaps = 14/412 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF K+   G  P++ T++ L++ LC+ GH    L   E+++N   + GV   P+ 
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGH----LQEGEKLLNKVLKNGVC--PNL 251

Query: 61  VIYTTIIDGLCKEGFVD-------KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE 113
             +   I GLC++G ++       +A+  L +M +K + PD  TYN++I G+       +
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A R+  +   +G  P+  T+  ++  +C++G ++ A  L E  +  G++P+  +YNTL+ 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G    G V +A +L   M   G   ++++Y+++ING CK   +  A +L +  ++KG  P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            + T+NTL  G  +  +++ A  + D M  HGV  D   Y + ++GLCK     + +E F
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
           + +    C  +I +Y+ LI+ LCK+ ++  A +L   +    LI D V++  +I   C +
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN-ETSKVVELLHRMDER 404
           G +D+A+ LF  ME +      VA   +M+       +     +L H M ++
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK 603



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 208/406 (51%), Gaps = 14/406 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPD 59
           +EA     K+   G EP+  TY+T+I G  + G    A  + ++      +F G V  PD
Sbjct: 275 VEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-----AKFKGFV--PD 327

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              Y ++I G+C++G +D A  L  +   K + P +V YN++I+G        +A +L  
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M  +G+ P++ T++++++ LCK G + +A+ LL   I  G  P+ F +NTL+DG+C   
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +++ A  +  SM S G   +V +Y+ ++NG CK  + E  +  +  ++ KG  P ++TYN
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYN 507

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RI 298
            L   L +  +V  A  L +E++  G+  D  ++ T I G C NG + EA +LFR + + 
Sbjct: 508 ILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    + +Y+ +I+   +   + +A +LFH +       D  TY +MI   C  G ++ 
Sbjct: 568 YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNS 627

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCI----RNNETSKVVELLHR 400
            +D  L     G  P    F  + + C+    R +E   +V L+ R
Sbjct: 628 GYDFLLKEIEIGFVPSLTTFGRV-INCLCVQHRVHEAVGIVHLMVR 672



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 190/376 (50%), Gaps = 7/376 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ +    K  G  P+  TY +LI G+C+ G    AL LFEE + G G      KP  V
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL-GKG-----LKPSIV 364

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I GL ++G V KA +L+  M  + ++PD+ TYN VI G C     ++A  L    
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAA 424

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++ TF+ ++D  CK  KM+ A  +L+ M   GV P+   YN++++G C   + 
Sbjct: 425 IAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKP 484

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E F  +   GC  N+ +Y+ILI   CK +++  AL L  E+ ++G+ P  V++ T+
Sbjct: 485 EDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTV 544

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             G      ++ A++LF  M Q++ +      Y   I+   +   +  A +LF  +    
Sbjct: 545 ISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D  +Y  +IDG CK G +   ++          +  + T+  +I+ LC   ++ +A 
Sbjct: 605 CDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAV 664

Query: 361 DLFLDMEAKGVAPDCV 376
            +   M   GV P+ V
Sbjct: 665 GIVHLMVRTGVVPEAV 680



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 191/388 (49%), Gaps = 13/388 (3%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
            Y + +    R G    A+++FE M   N      C+P    Y  I++ L + G+ ++A 
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYN------CEPSIFSYNAIMNILVEYGYFNQAH 131

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           ++ L+MK + I PDV T+   I+ FC       A RL   M  QG + N V +  ++   
Sbjct: 132 KVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGF 191

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            +     EA +L   M+++G+ P+   +N LM   C  G +   ++L   +   G   N+
Sbjct: 192 YEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251

Query: 201 FSYSILINGYCKNKEIEGALSLYSE-------MLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           F+++I I G C+   +EGA S   E       M++KG++P   TYNT+  G  ++ +++ 
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A ++  + +  G   D + Y + I G+C++G I  AL LF        +  I  Y+ LI 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL + G +  A +L + + +  +  D+ TYN++I+ LC  G +  A++L     AKG  P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   FNTL+ G  +  +    + +L  M
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSM 459



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 47/351 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   G  P++ TY+ +INGLC+ G    A NL    I   G       PD 
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI-AKGYL-----PDI 433

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + T+IDG CK   +D A  +L  M    + PDV+TYNS++ G C A    +    F  
Sbjct: 434 FTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKM 493

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +M++G  PN++T++++++ LCK  K+ EA  LLE +   G+ P+   + T++ GFC  G 
Sbjct: 494 IMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGD 553

Query: 181 VNRAKELFVSMESM------------------------------------GCKHNVFSYS 204
           ++ A +LF  ME                                      GC  + ++Y 
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ++I+G+CK   +        + +  G  P++ T+  +   L   H+V  A  +   M R 
Sbjct: 614 VMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRT 673

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           GV  +  A  T  D   K    V A ++     + K  +   +Y  L DG+
Sbjct: 674 GVVPE--AVVTIFDADKK---AVAAPKIIVEDLLKKSHITYYAYELLYDGI 719


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 220/429 (51%), Gaps = 35/429 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   GC+PN  T   L+ G CR G T  AL   +  + GN         + V+
Sbjct: 170 ARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGN--------VNRVV 221

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++   CK+   D+A++L+ +M +K + PDVVT+NS I   C A    EA R+F +M 
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQ 281

Query: 123 DQG----VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             G     +PNVVTF++++   C+ G MEEA  L+E M + G   +   YNT + G    
Sbjct: 282 MDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++   + +   M   G + N++SY+I+++G C+N  +  A  L   M+S G+ P  VTY
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTY 401

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  G     +V  A  + +EM R G   +T+   T ++ L K G   EA E+ + +  
Sbjct: 402 TTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNE 461

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------------PRGVL---------- 336
              +LD  + + +++GLC++G L+ A E+   +            P   L          
Sbjct: 462 KSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTN 521

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + DV+TY  +I+ LC  GK+++A   F++M AK + PD V ++T +L   +  + S  + 
Sbjct: 522 VPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALR 581

Query: 397 LLHRMDERN 405
           +L  M ERN
Sbjct: 582 VLKDM-ERN 589



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 213/439 (48%), Gaps = 60/439 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V+T+++ I+ LCR G    A  +F +M   +GE G+  KP+ V
Sbjct: 237 EAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDM-QMDGELGLP-KPNVV 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G C+EG +++A+ L+  MK       + +YN+ + G        E + +  EM
Sbjct: 295 TFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G++PN+ +++++MD LC+N  M +A +L++LM+  GV P+   Y TL+ G+C  G+V
Sbjct: 355 VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414

Query: 182 NRAKELFVSMESMGCKHNVF----------------------------SY-------SIL 206
             AK +   M   GC  N +                            SY       +I+
Sbjct: 415 FEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV 474

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK----------------------PTVVTYNTLFIG 244
           +NG C+N E+E A  + SEM + G                        P V+TY TL  G
Sbjct: 475 VNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLING 534

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++ ++E A K F EM    +  D+  Y TF+   CK G I  AL + + +    C   
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKT 594

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +++Y+ LI GL   G++   + L   +    +  D+ TYN MI+ LC  GK   A  L  
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 365 DMEAKG-VAPDCVAFNTLM 382
           +M  KG V+P+  +F  L+
Sbjct: 655 EMLDKGVVSPNVSSFKILI 673



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 209/455 (45%), Gaps = 65/455 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E  ++  ++   G EPN+ +Y+ +++GLCR    + A  L + M++ NG +     PD 
Sbjct: 345 LEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS-NGVY-----PDT 398

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YTT++ G C +G V +AK +L +M  K  +P+  T N+++         +EA+ +  +
Sbjct: 399 VTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQK 458

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------ 162
           M ++  Q + VT +++++ LC+NG++E+AS+++  M   G                    
Sbjct: 459 MNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNV 518

Query: 163 ----PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P+   Y TL++G C  G++  AK+ F+ M +     +  +Y   +  +CK  +I  
Sbjct: 519 STNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISS 578

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL +  +M   G   T+ TYN+L +GL    Q+   + L DEM+  G+  D   Y   I+
Sbjct: 579 ALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMIN 638

Query: 279 GLCKNGYIVEALELFRT-LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH-------- 329
            LC+ G   +A  L    L       ++ S+  LI   CKSG  K+A ELF         
Sbjct: 639 CLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGH 698

Query: 330 ---------------------------SLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                                      SL R +L  + + Y  +I  LC DG++D AH L
Sbjct: 699 KEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM-YEDLIDKLCKDGRLDDAHGL 757

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              +  KG   D  +F  ++ G  +     +  EL
Sbjct: 758 LQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 168/328 (51%), Gaps = 6/328 (1%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L   M    +NP+  T+N +I+  C +N  + A+ LF +M ++G QPN  T  +++   C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + G+ ++A + ++   ++G   N  VYNTL+  FC     + A++L   M   G   +V 
Sbjct: 198 RAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKG----IKPTVVTYNTLFIGLFEIHQVERAFKL 257
           +++  I+  C+  ++  A  ++ +M   G     KP VVT+N +  G  +   +E A  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            + M++ G      +Y T++ GL +NG ++E   +   +     E +I SY+ ++DGLC+
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +  +  A  L   +    +  D VTY  ++H  C+ GK+ +A  +  +M  KG  P+   
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
            NTL+    +    S+  E+L +M+E++
Sbjct: 436 CNTLLNSLWKEGRKSEAEEMLQKMNEKS 463



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 144/294 (48%), Gaps = 9/294 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+VITY+TLINGLC+ G    A   F EM+  N        PD+V Y T +   CK+G +
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKN------LHPDSVTYDTFVLNFCKQGKI 576

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A  +L  M+    +  + TYNS+I G        E   L  EM ++G+ P++ T++ +
Sbjct: 577 SSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNM 636

Query: 137 MDELCKNGKMEEASQLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++ LC+ GK ++A+ LL  M+  GV  PN   +  L+  FC +G    A ELF    S+ 
Sbjct: 637 INCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV- 695

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C H    YS++ N      ++  A  L+   L + +      Y  L   L +  +++ A 
Sbjct: 696 CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAH 755

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI-LKCELDIRSY 308
            L  ++   G   D  ++   IDGL K G   +A EL R + + L+ +   R+Y
Sbjct: 756 GLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKTSDRTY 809



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 9/228 (3%)

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R +    L+  M   G     +++++LI   C++  ++ A  L+ +M  KG +P   T  
Sbjct: 131 RPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVG 190

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G     + ++A +  D   + G   +   Y T +   CK     EA +L   +   
Sbjct: 191 ILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEK 248

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR----GVLIADVVTYNIMIHALCADGK 355
               D+ +++  I  LC++G++  A  +F  +      G+   +VVT+N+M+   C +G 
Sbjct: 249 GLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGM 308

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M++A  L   M+  G      ++NT +LG +RN    K++E    +DE
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWLLGLLRN---GKLLEGRSVLDE 353


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 211/381 (55%), Gaps = 5/381 (1%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAK 80
           ++NG C+ G+ +V  NL  ++ +    F ++    C+ + V YT +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGN-LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            +  +M++ +  P V TY  ++     +    EA  LF EM ++G +PN+ T++V+++ +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK  K+EE  ++L+ M++ G+ P+   YN L+DG+C  G V  A+E+   M S  C  N 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI G+C+ K +  A++L S+ML   + P+VVTYN+L  G  +I  ++ A++L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M  +GV  D W Y  FID LCK G I EA  LF +L+    + +   Y+ LIDG CK+G+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A  L   +     + +  TYN +I  LC + K+ +A  L   M  KG+      +  
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L++  ++  +      +L +M
Sbjct: 360 LIVAMLKEGDFDYAHRILDQM 380



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 203/394 (51%), Gaps = 8/394 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  LF++++  GCEPN+ TY+ +IN +C+         + +EM+    E G+V  P  
Sbjct: 91  MEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV----EKGLV--PSV 144

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +IDG CKEG V+ A+E+L  M   + NP+  TYN +I GFC   + + A  L  +
Sbjct: 145 PTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSK 204

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P+VVT++ ++   CK G ++ A +LL LM + GV P+ + Y+  +D  C  GR
Sbjct: 205 MLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR 264

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  LF S++  G K N   Y+ LI+GYCK  +++ A SL   ML++   P   TYN 
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +V+ A  L + M + G+      Y   I  + K G    A  +   +    
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKA 359
            + D+  Y+  I   C  G +K A ++   +  RGV+  D +TY ++I A    G ++ A
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM-PDALTYTLVIDAYGGLGLLNPA 443

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
            D+   M   G  P    ++ L+   ++   T K
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK 477



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 186/379 (49%), Gaps = 10/379 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +F K++   C P V TY+ +++ L  +G  + A+NLF EM     E G  C+P+  
Sbjct: 57  EGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM----RERG--CEPNIH 110

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+ +CKE  +++ + +L +M +K + P V TYN++I G+C       A+ +   M
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PN  T++ ++   C+   +  A  LL  M++  + P+   YN+L+ G C  G +
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   + ++YS+ I+  CK   IE A  L++ +  KGIK   V Y  L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--RIL 299
             G  +  +++ A  L D M       ++  Y   IDGLCK   + EAL L  ++  + L
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           KC   + +Y+ LI  + K G    A  +   +       DV  Y   IHA C  G + +A
Sbjct: 351 KCT--VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408

Query: 360 HDLFLDMEAKGVAPDCVAF 378
            D+   M  +GV PD + +
Sbjct: 409 EDMMSMMFERGVMPDALTY 427



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 179/412 (43%), Gaps = 35/412 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   + +  C PN  TY+ LI G CR  +   A+ L  +M+           P  V 
Sbjct: 163 AQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR------LTPSVVT 216

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++I G CK G++D A  LL  M +  + PD  TY+  I   C      EA  LF  + 
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G++ N V ++ ++D  CK GKM++A+ LL+ M+     PN+  YN L+DG C   +V 
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQ 336

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L  SM   G K  V +Y+ILI    K  + + A  +  +M+S G +P V  Y    
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFI 396

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                   ++ A  +   M   GV  D   Y   ID     G +  A ++ + +    C+
Sbjct: 397 HAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCD 456

Query: 303 LDIRSYSCLIDGLCKSG-----------------------------RLKIAWELFHSLPR 333
               +YSCLI  L K                               + + A ELF  +  
Sbjct: 457 PSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLE 516

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                ++ TY  +I  LC  G++  A  LF  M  +GV+P    +N+L+  C
Sbjct: 517 HGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 195/425 (45%), Gaps = 39/425 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL +K+      P+V+TY++LI+G C+ G+   A  L   M     E GVV  PD   
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM----NENGVV--PDQWT 251

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+  ID LCK+G +++A  L   +K+K I  + V Y ++I G+C A   ++A  L   M+
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PN  T++ ++D LCK  K++EA  L+E MIQ G++     Y  L+      G  +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   M S G + +V+ Y+  I+ +C    I+ A  + S M  +G+ P  +TY  + 
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-----------------NGY 285
                +  +  AF +   M   G       Y   I  L K                 N +
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491

Query: 286 IVE------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLP 332
             +            ALELF  +    C  +I +Y+ LI GLCK GRL +A +LF H   
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNE 551

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR--NNE 390
           RGV  ++ + YN +++  C  G    A  L   M   G  P   + N L  G     + E
Sbjct: 552 RGVSPSEAI-YNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 391 TSKVV 395
            +KVV
Sbjct: 611 KAKVV 615



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 155/372 (41%), Gaps = 58/372 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A +L  ++    C PN  TY+ LI+GLC+      AL L E MI               
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361

Query: 50  ------GEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 G+F    +           PD  IYT  I   C  G + +A++++  M ++ + 
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG-------- 144
           PD +TY  VI  +      N A  +   M D G  P+  T+S ++  L K          
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 145 ---------------------KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
                                K E A +L E M++ G  PN   Y  L+ G C  GR+  
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A++LF  M   G   +   Y+ L+N  C+      A+ L   M+  G  P + + N LF 
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL+E    E+A  +F  + + G   D  A++  IDGL KNG      EL   +    C++
Sbjct: 602 GLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQI 661

Query: 304 DIRSYSCLIDGL 315
             ++Y  LI+GL
Sbjct: 662 HPQTYRMLIEGL 673


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 217/402 (53%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ LF ++K  G  P+ +TY+++I+G  + G     +  FEEM +      + C+PD + 
Sbjct: 152 ASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVIT 205

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+  CK G + K  E   +MK   + P+VV+Y++++  FC  +   +A + +++M 
Sbjct: 206 YNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMR 265

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  T++ ++D  CK G + +A +L + M Q+GV  N   Y  L+DG C   R+ 
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ELF  M + G   N+ SY+ LI+G+ K K ++ AL L  EM  +GIKP ++ Y T  
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L  + ++E A  + +EMQ  G+ A+T+ Y T +D   K+    E L L   +  L  E
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
           +   ++  LIDGLCK+  +  A + F  +     L A+   Y  MI  LC + +++ A  
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M  KG+ PD  A+ +L+ G ++     + + L  +M E
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 190/352 (53%), Gaps = 4/352 (1%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L +E   ++A +   +MK   + P   + N ++  F     ++  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           KR F +M+  G +P V T+++++D +CK G +E AS L E M   G+ P+   YN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   GR++     F  M+SM C+ +V +Y+ LIN +CK  ++   L  + EM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV+Y+TL     +   +++A K + +M+R G+  +   Y + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++ +Y+ LIDGLC   R+K A ELF  +    +I ++ +Y  +IH      
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLM--LGCIRNNETSKVVELLHRMDER 404
            MD+A +L  +M+ +G+ PD + + T +  L  +   E +KVV  ++ M E+
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV--MNEMQEK 407



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 190/400 (47%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F+K+K     P   + + L++   R G T      F++MI      G   KP   
Sbjct: 81  EALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI------GAGSKPTVF 134

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID +CKEG ++ A  L  +MK + + PD VTYNS+I G+      ++    F EM
Sbjct: 135 TYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V+T++ +++  CK GK+ +  +    M Q G++PN   Y+TL+D FC    +
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A + +V M  +G   N  +Y+ L++ YCK   +  A  L  EM   G++  VVTY  L
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTAL 314

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ +++ A +LF +M   GV  +  +Y   I G  K   +  ALEL   ++    
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI 374

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+  Y   I  LC   +++ A  + + +    + A+   Y  ++ A        +   
Sbjct: 375 KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLH 434

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M    +    V F  L+ G  +N   SK ++   R+
Sbjct: 435 LLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRI 474



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 42/303 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   +  ++  G  PN  TY++L++  C+ G+   A  L +EM     E+ VV      
Sbjct: 256 QALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVV------ 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLC    + +A+EL  +M    + P++ +Y ++I GF  A + + A  L  EM
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
             +G++P+++ +   +  LC   K+E A  ++  M + G++ N F+Y TLMD        
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENP 429

Query: 174 ---------------------------GFCLTGRVNRAKELFVSMES-MGCKHNVFSYSI 205
                                      G C    V++A + F  + +  G + N   Y+ 
Sbjct: 430 SEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTA 489

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G CK  ++E A +L+ +M  KG+ P    Y +L  G  +   V +A  L D+M   G
Sbjct: 490 MIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549

Query: 266 VAA 268
           V +
Sbjct: 550 VES 552



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 18/151 (11%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
            +T+  LI+GLC+      A++ F  + N   +FG+  + +A IYT +IDGLCKE  V+ 
Sbjct: 448 AVTFCVLIDGLCKNKLVSKAIDYFGRISN---DFGL--QANAAIYTAMIDGLCKEDQVEA 502

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A  L  QM  K + PD   Y S+I G     +  +A  L  +M + GV+           
Sbjct: 503 ATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGAR-----FG 557

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           +LC+N         ++L +++G R     YN
Sbjct: 558 DLCQN--------TIKLSLRMGARVGVQHYN 580


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 209/402 (51%), Gaps = 5/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   + AFG EP++ TY+ L  GLC+ G    A  L +EM     + G+V  PD V
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM----EQLGIVS-PDVV 351

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D   K      A  LL +M++K +   +VT+N +++G C      EA      M
Sbjct: 352 TYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMM 411

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+T++ ++D  CK G + +A  L++ M++ G++ + F  NTL+   C   R 
Sbjct: 412 TEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 471

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+EL  +    G   +  SY  ++  Y K  + E AL L+ EM+ + + P++ TYNTL
Sbjct: 472 EEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + ++  A    +E+   G+  D   Y   I   CK G + +A +    +     
Sbjct: 532 IKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSF 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ + + L++GLC  GRL+ A +LF S        DV+TYN +I ALC D  +D A  
Sbjct: 592 KPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALR 651

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            F DME +G+ PD   +N L+        + +  ++LH+++E
Sbjct: 652 FFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 198/400 (49%), Gaps = 7/400 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  L A    PN  T++ L++  C  G    AL+   +M      FG+   PDAV Y T+
Sbjct: 197 FHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQG----FGL--SPDAVTYNTL 250

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ++  C++G + +A+ LL +MK + I P   TYN+++  +       +A  +   M   G 
Sbjct: 251 LNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGF 310

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAK 185
           +P++ T++V+   LC+ GK++EA +L + M Q+G V P+   YNTL+D      R + A 
Sbjct: 311 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDAL 370

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M   G K ++ +++I++ G C+  ++E AL     M  +G+ P V+TYNTL    
Sbjct: 371 NLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDAS 430

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V +AF L DEM R G+  DT+   T +  LCK     EA EL R         D 
Sbjct: 431 CKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDE 490

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY  ++    K  + + A  L+  + +  L   + TYN +I  L   GK+ +A D   +
Sbjct: 491 VSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNE 550

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +   G+ PD   +N ++    +  +  K  +  ++M E +
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS 590



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 13/405 (3%)

Query: 3   AAALFTKLKAFGC-EPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPD 59
           AA L    +  GC  P++   + +++ L R+  T    +L+ F  +I       +   P+
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI------ALRLHPN 208

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              +  ++   C +G +  A   L +M+   ++PD VTYN+++   C      EA+ L  
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M  +G+ P   T++ ++    + G +++A+ ++E M   G  P+ + YN L  G C  G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328

Query: 180 RVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +V+ A +L   ME +G    +V +Y+ L++   K +    AL+L  EM  KG+K ++VT+
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +  GL    Q+E A    + M   G+  D   Y T ID  CK G + +A  L   +  
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              ++D  + + L+  LCK  R + A EL  + P+   + D V+Y  ++ A   + K + 
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEP 508

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  L+ +M  + + P    +NTL+ G    +   K+ E + +++E
Sbjct: 509 ALCLWDEMIKRKLTPSISTYNTLIKGL---STMGKLTEAIDKLNE 550



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 181/406 (44%), Gaps = 63/406 (15%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV---------VCK------- 57
           G  P+VITY+TLI+  C+ G+   A  L +EM+    +            +CK       
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 58  -------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                        PD V Y T++    KE   + A  L  +M  + + P + TYN++I+G
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKG 534

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
                   EA     E+M+ G+ P+  T+++I+   CK G +E+A Q    M++   +P+
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
               NTLM+G CL GR+ +A +LF S    G K +V +Y+ LI   CK+ +++ AL  ++
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFA 654

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G++P V TYN L   L E  +   A K+  ++   G     + Y +         
Sbjct: 655 DMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPS--------- 705

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            I  ++E   T +  + + DI S                               D  +YN
Sbjct: 706 -IKSSVEAVETGKDPEVKSDIESVG------------------------NTQGDDQESYN 740

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
             I  LC  G++ +A  +  +M  KG++ D   + TLM G I+  +
Sbjct: 741 KYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 4/330 (1%)

Query: 79  AKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRL--FIEMMDQGVQPNVVTFSV 135
           A +LL   + +  + P +   N+V+     +  ++    L  F  ++   + PN  TF++
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C  G + +A   L  M   G+ P+A  YNTL++  C  G +  A+ L   M+  G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
                 +Y+ L++ Y +   I+ A  +   M + G +P + TYN L  GL +  +V+ AF
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 256 KLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           KL DEM++ G V+ D   Y T +D   K     +AL L   +R    +  + +++ ++ G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC+ G+L+ A      +    L  DV+TYN +I A C  G + KA  L  +M   G+  D
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               NTL+    +     +  ELL    +R
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAPPQR 484



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 9/248 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     +L   G  P+  TY+ +I+  C+ G    A     +M+  +       KPD V
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS------FKPDVV 596

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T+++GLC  G ++KA +L     +K    DV+TYN++I+  C  ND + A R F +M
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+QP+V T++V++  L + G+  EA ++L  + + G     F Y ++          
Sbjct: 657 EVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV-ET 715

Query: 182 NRAKELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  E+   +ES+G     +  SY+  I   C   +++ A ++  EM+ KG+     TY 
Sbjct: 716 GKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYI 775

Query: 240 TLFIGLFE 247
           TL  GL +
Sbjct: 776 TLMEGLIK 783



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 44/183 (24%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  LF      G + +VITY+TLI  LC+      AL  F +M + G        +PD 
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG-------LQPDV 665

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-------------------------KDKNINPDV 95
             Y  ++  L + G   +A+++L ++                         KD  +  D+
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDI 725

Query: 96  VT-----------YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +           YN  I+  C      EAK +  EMM +G+  +  T+  +M+ L K  
Sbjct: 726 ESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQ 785

Query: 145 KME 147
           K +
Sbjct: 786 KRQ 788


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 203/361 (56%), Gaps = 6/361 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +   K+   G EP+++T S+L+NG C +     A+ +  +M     + G+  K D V
Sbjct: 141 SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM----EKMGI--KRDVV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + T +ID LCK   V  A E+L +MKD+ I+P+VVTY+S+I G C +    +A+R   EM
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV+TFS ++D   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV
Sbjct: 255 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+    V+ NTL
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  +++ A  +F  M  +G+  +  +Y   + GL  NG + +AL  F  ++  + 
Sbjct: 375 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LDI +Y+ +I G+CK+  +K A++LF+ L    +  D   Y IMI  L   G   +A  
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494

Query: 362 L 362
           L
Sbjct: 495 L 495



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 204/390 (52%), Gaps = 7/390 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++ T + L+N  CR      AL+   +M+    + G+  +PD V  +++++G C    
Sbjct: 120 SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 173

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A  +  QM+   I  DVV    +I   C       A  +   M D+G+ PNVVT+S 
Sbjct: 174 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LCK+G++ +A + L  M    + PN   ++ L+D +   G++++   ++  M  M 
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NVF+YS LI G C +  ++ A+ +   M+SKG  P VVTY+TL  G F+  +V+   
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           KL D+M + GVAA+T +  T I G  + G I  AL +F  +       +IRSY+ ++ GL
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
             +G ++ A   F  + +     D++TY IMIH +C    + +A+DLF  ++ K V PD 
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 473

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A+ T+M+  +         + L+R  +++
Sbjct: 474 KAY-TIMIAELNRAGMRTEADALNRFYQKH 502



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 6/294 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++K  G  PNV+TYS+LI GLC++G    A     EM +          P+ 
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 263

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + ++ +ID   K G + K   +   M   +I+P+V TY+S+I G C  N  +EA ++   
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVVT+S + +   K+ ++++  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 324 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M        ++TY  
Sbjct: 384 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 444 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 168/349 (48%), Gaps = 3/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN---INPDVVTYNSVIRGFCYANDSNEA 114
           P  V +  ++  + K    D    L  ++++     I+PD+ T N ++  FC     + A
Sbjct: 83  PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                +MM  G++P++VT S +++  C +  +++A  +   M ++G++ +  V   L+D 
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C    V  A E+   M+  G   NV +YS LI G CK+  +  A     EM SK I P 
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V+T++ L     +  ++ +   ++  M +  +  + + Y + I GLC +  + EA+++  
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  ++ +YS L +G  KS R+    +L   +P+  + A+ V+ N +I      G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           K+D A  +F  M + G+ P+  ++N ++ G   N E  K +     M +
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 150/312 (48%), Gaps = 3/312 (0%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL--- 152
           + Y  V+R   +    ++A  LF+ M      P++V F+ ++  + K    +    L   
Sbjct: 51  IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +E    I + P+ +  N L++ FC   + + A      M  +G + ++ + S L+NG+C 
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  I+ A+ +  +M   GIK  VV    L   L +   V  A ++   M+  G++ +   
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y + I GLCK+G + +A      +   K   ++ ++S LID   K G+L     ++  + 
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +  +V TY+ +I+ LC   ++D+A  +   M +KG  P+ V ++TL  G  +++   
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350

Query: 393 KVVELLHRMDER 404
             ++LL  M +R
Sbjct: 351 DGIKLLDDMPQR 362


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 208/415 (50%), Gaps = 21/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G EPN++TY+ +INGLCR G       +  EM            PD V
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG------FAPDGV 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+++G CK G   +A  L  +M    + PDVVTY S+I   C A + N A   F +M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN VT++ +++   + G M+EA ++ + MI+ G  P    YN L++G C++GR+
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   ME  G   +V SYS +I G+C+ +E++ A  + +EM+ KG+ P  +TY++L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  ++  A  LF EM    +  D + Y + I+G CK G + EAL L   +     
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA------------ 349
             D  +Y+ LI+GL K  R + A  L   L     I + +TY+ +I +            
Sbjct: 550 LPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVAL 609

Query: 350 ---LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               C  G M++A  +F  M  +   P+   +N ++ G  R+    K  +L   M
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++ A G   NV +Y+ LI G C  G+  + L  FEEM          C P+ V 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNR------CLPNVVT 240

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I   CK   +D+A +LL  M  + + P+++TYN VI G C      E   +  EM 
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ VT++ +++  CK G   +A  L   M++ G+ P+   Y +L++  C  G +N
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA E F  M   G + N  +Y+ LING+ +   ++ A  ++ EM+  G  PT+VTYN L 
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     ++E A  L   M+  G++ D  +Y T I G C+   +  A ++   +      
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +YS LI GLC+  RL  A +LF  +    L+ D  TY  +I+  C +G +++A +L
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG  PD V +N L+ G  +   T +   LL ++
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 203/389 (52%), Gaps = 7/389 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIV-ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           G  P V++Y+ +++ + R    ++ A  ++ EMI       V        Y  +I G C 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFS------YNILIRGFCA 215

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G ++       +M+     P+VVTYN+VI  +C     +EA +L   M  +G++PN++T
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++ LC+ G++EE S +L  M + G  P+   YNTL++G+C  G  ++A  L   M 
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +V +Y+ LIN  CK   +  A+  + +M  +G++P  VTY +L  G  +   ++
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A++++DEM R G       Y   ++G C +G + EA+ L R +       D+ SYS +I
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G C+   L  A+++   +    +  D +TY+ +I  LC   ++++A DLF +M  K + 
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD   + +L+ G  +  + ++ + L   M
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEM 544



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 181/351 (51%), Gaps = 1/351 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN-E 113
           +C   + ++  ++       F++KA  ++   K     P V++YN+++            
Sbjct: 127 MCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A++++ EM+  GV  NV ++++++   C  G +E   +  E M +    PN   YNT++ 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            +C   R++ A +L  SM   G + N+ +Y+++ING C+   IE    + +EM  KG  P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             VTYNTL  G  ++    +A  L  EM R+G+  D   Y + I+ +CK G +  A+E F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             + +     +  +Y+ LI+G  + G +  A+ ++  + R      +VTYN +++  C  
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+M++A  L   ME KG++PD V+++T++ G  R  E  +  ++   M E+
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 21/260 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++  G  P+V++YST+I G CR      A  +  EM+    E GV   PDA+
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV----EKGV--SPDAI 484

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GLC++  +++A +L  +M +K++ PD  TY S+I G+C   D NEA  L  EM
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
           + +G  P+ VT++V+++ L K  +  EA +LL  +      PN   Y+TL++        
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFK 604

Query: 174 -------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G +N A ++F SM     K N   Y+++I+G+C++  +  A  LY EM
Sbjct: 605 SVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664

Query: 227 LSKGIKPTVVTYNTLFIGLF 246
           +  G  P  VT   L   L+
Sbjct: 665 VDFGFIPHTVTIIALVKALY 684



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 21/298 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ ++   G  P ++TY+ L+NG C +G    A+ L   M  G G       PD V
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM-EGKG-----LSPDVV 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+TII G C+   +D+A ++  +M +K ++PD +TY+S+I+G C     NEA  LF EM
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+  T++ +++  CK G + EA  L + MI+ G  P+   YN L++G     R 
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 182 NRAKELFVSM---ESM--GCKHNVF----------SYSILINGYCKNKEIEGALSLYSEM 226
             AK L + +   ES+  G  ++            S   LI G+C    +  A  ++  M
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           + +  KP    YN +  G      V +A KL+ EM   G    T      +  L   G
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 44/191 (23%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  LF ++      P+  TY++LING C+ G    ALNL +EMI               
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 47  NGNGE--------------FGVVCKPDAVIYTTIID---------------GLCKEGFVD 77
           NG  +              F     P+ + Y T+I+               G C +G ++
Sbjct: 561 NGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A ++   M  +N  P+   YN +I G C   + ++A +L+ EM+D G  P+ VT   ++
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALV 680

Query: 138 DELCKNGKMEE 148
             L   G  E+
Sbjct: 681 KALYSEGMDEQ 691


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 198/369 (53%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +L+ FG  PNV+ Y+TLI+G C+ G    A +LF EM    G+FG+V   +   YT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K G   +  E+  +M++  + P++ TYN V+   C    + +A ++F EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V  N+VT++ ++  LC+  K  EA+++++ M   G+ PN   YNTL+DGFC   ++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+CK  +  GA  +  EM  +GIKP+ VTY  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+++   K E + 
Sbjct: 419 ARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNE 478

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ ++ G CK G    A  LF  +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 539 MIDSGIGPS 547



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 204/384 (53%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V ++  +I G C  G    + +L  E+     EFG    P+ VIYTT+IDG CK+G ++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVEL----REFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KAK+L  +M    +  +  TY  +I G        +   ++ +M + GV PN+ T++ +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           ++LCK+G+ ++A ++ + M + GV  N   YNTL+ G C   + N A E+   M+S G  
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C  +++  ALSL  ++ S+G+ P++VTYN L  G  +      A K+
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+  G+      Y   ID   ++  + +A++L  ++  L    D+ +YS LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            GR+  A  LF S+       + V YN M+   C +G   +A  LF +ME K + P+  +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +  ++    +  ++ +   L+ +M
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKM 539



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 183/346 (52%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   +  +I G C+ G ++K+ +LL+++++   +P+VV Y ++I G C   +  +AK LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G+  N  T++V++  L KNG  ++  ++ E M + GV PN   YN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR   A ++F  M   G   N+ +Y+ LI G C+  +   A  +  +M S GI P ++TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  G   + ++ +A  L  +++  G++     Y   + G CK G    A ++ + +  
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +    +Y+ LID   +S  ++ A +L  S+    L  DV TY+++IH  C  G+M++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF  M  K   P+ V +NT++LG  +   + + + L   M+E+
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK 507



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 190/383 (49%), Gaps = 18/383 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++  FG   N  TY+ LI+GL + G       ++E+M     E GV   P+  
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM----QEHGVF--PNLH 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK+G    A ++  +M+++ ++ ++VTYN++I G C    +NEA  +  +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN++T++ ++D  C   K+ +A  L   +   G+ P+   YN L+ GFC  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   ME  G K +  +Y+ILI+ + ++  +E A+ L S M   G+ P V TY+ L
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     ++  A +LF  M       +   Y T + G CK G    AL LFR +   + 
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAH 360
             ++ SY  +I+ LCK  + K A  L   +   G+  +D       I  L +  K D +H
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDS------ILNLISRAKND-SH 562

Query: 361 DLFLDMEAKGVAPDCVAFNTLML 383
              +D E     P  + F+ LM+
Sbjct: 563 SRSMDEE----EPASMVFDGLMV 581



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 1/347 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           K  + +Y  II+   +   +D +     +M DK   P    +N+++  F   + S     
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLT-FVVGSSSFNQWW 149

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            F       V  +V +F +++   C+ G++E++  LL  + + G  PN  +Y TL+DG C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G + +AK+LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P + 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN +   L +  + + AFK+FDEM+  GV+ +   Y T I GLC+     EA E+   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++ +Y+ LIDG C   +L  A  L   L    L   +VTYNI++   C  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             A  +  +ME +G+ P  V +  L+    R++   K ++L   M+E
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE 436



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 163/339 (48%), Gaps = 1/339 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  +  F   +  L    + +        Y  +I  +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P    F+ ++  +  +    +         +I V  + + +  ++ G C  G + ++ 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L V +   G   NV  Y+ LI+G CK  EIE A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+    ++ F+++++MQ HGV  +   Y   ++ LCK+G   +A ++F  +R      +I
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI GLC+  +   A E+   +    +  +++TYN +I   C   K+ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRD 363

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++++G++P  V +N L+ G  +  +TS   +++  M+ER
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +L+ FG  PNV+ Y+TLI+G C+ G    A +LF EM    G+FG+V   +   YT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K G   +  E+  +M++  + P++ TYN V+   C    + +A ++F EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V  N+VT++ ++  LC+  K  EA+++++ M    + PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   ++S G   ++ +Y++L++G+C+  +  GA  +  EM  +GIKP+ VTY  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +E A +L   M+  G+  D   Y   I G C  G + EA  LF+++     E + 
Sbjct: 419 ARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNE 478

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I G CK G    A  LF  +    L  +V +Y+ +I  LC + K+ +A DL   
Sbjct: 479 VIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 539 MIDSGIDPS 547



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 204/384 (53%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V ++  +I G C  G    + +L  E+     EFG    P+ VIYTT+IDG CK+G ++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVEL----REFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KAK+L  +M    +  +  TY  +I G        +   ++ +M + GV PN+ T++ +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           ++LCK+G+ ++A ++ + M + GV  N   YNTL+ G C   + N A ++   M+S    
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C   ++  ALSL  ++ S+G+ P++VTYN L  G         A K+
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+  G+      Y   ID   ++  +  A++L  ++  L    D+ +YS LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G++  A  LF S+   +L  + V YN MI   C +G   +A  LF DME K +AP+  +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++ L+    +  +  +  +L+ +M
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 185/346 (53%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   +  +I G C+ G ++K+ +LL+++++   +P+VV Y ++I G C   +  +AK LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G+  N  T++V++  L KNG  ++  ++ E M + GV PN + YN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR   A ++F  M   G   N+ +Y+ LI G C+  +   A  +  +M S  I P ++TY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  G   + ++ +A  L  +++  G++     Y   + G C+ G    A ++ + +  
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +    +Y+ LID   +S  ++ A +L  S+    L+ DV TY+++IH  C  G+M++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF  M  K + P+ V +NT++LG  +   + + + L   M+E+
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++  FG   N  TY+ LI+GL + G       ++E+M     E GV   P+  
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM----QEHGVF--PNLY 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK+G    A ++  +M+++ ++ ++VTYN++I G C    +NEA ++  +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN++T++ ++D  C  GK+ +A  L   +   G+ P+   YN L+ GFC  G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   ME  G K +  +Y+ILI+ + ++  +E A+ L S M   G+ P V TY+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     Q+  A +LF  M    +  +   Y T I G CK G    AL LFR +   + 
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV 341
             ++ SYS LI  LCK  +LK A +L   +   G+  +D +
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTI 550



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 170/347 (48%), Gaps = 1/347 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           K  + +Y  II+   +   +D +     +M DK   P    +N+++  F   + S     
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLT-FVVGSSSFNQWW 149

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            F       V  +V +F +++   C+ G++E++  LL  + + G  PN  +Y TL+DG C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G + +AK+LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P + 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN +   L +  + + AFK+FDEM+  GV+ +   Y T I GLC+     EA ++   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++ +Y+ LIDG C  G+L  A  L   L    L   +VTYN+++   C  G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             A  +  +ME +G+ P  V +  L+    R++     ++L   M+E
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 167/339 (49%), Gaps = 1/339 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  +  F   +  L    + +        Y  +I  +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P    F+ ++  +  +    +         +I V  + + +  ++ G C  G + ++ 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L V +   G   NV  Y+ LI+G CK  EIE A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+    ++ F+++++MQ HGV  + + Y   ++ LCK+G   +A ++F  +R      +I
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI GLC+  +   A ++   +   V+  +++TYN +I   C+ GK+ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRD 363

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++++G++P  V +N L+ G  R  +TS   +++  M+ER
Sbjct: 364 LKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEER 402



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF  +     EPN + Y+T+I G C+ G +  AL LF +M            P+  
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE------LAPNVA 514

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
            Y+ +I  LCKE  + +A++L+ +M D  I+P     N + R 
Sbjct: 515 SYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 205/383 (53%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  +++  G  P+V++YS +++G C+       L L EE+           KP+  
Sbjct: 270 EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG------LKPNQY 323

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +II  LCK G V +A+++L  MK++ I PD V Y ++I GF  + + +   +LF EM
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ ++  LC+ GK+ EA +L   M+  G++P+   Y  L+DG+C  G +
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   NV +Y+ L++G CK  E++ A  L  EM  KG++P V TYN L
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  +E+A KL +EM   G   DT  Y T +D  CK G + +A EL R +     
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I +++ L++G C SG L+    L   +    ++ +  T+N ++   C    M    +
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M A+GV PD   +N L+ G
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKG 646



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 206/385 (53%), Gaps = 7/385 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPD 59
           +EA  LF KL  +G   +V + +  +  L  +   I  A  +F E      E GV    +
Sbjct: 198 LEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY----SEVGVCW--N 251

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y  I+  LC+ G V +A  LL+QM+ +   PDVV+Y+ ++ G+C      +  +L  
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLME 311

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+  +G++PN  T++ I+  LCK G++ EA Q+L +M    + P+  VY TL+ GF  +G
Sbjct: 312 ELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSG 371

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+   +LF  M+      +  +Y+ +I+G C+  ++  A  L+SEMLSKG+KP  VTY 
Sbjct: 372 NVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  +  +++ AF L ++M   G+  +   Y   +DGLCK G +  A EL   +   
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++ +Y+ LI+GLCK G ++ A +L   +       D +TY  ++ A C  G+M KA
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLG 384
           H+L   M  KG+ P  V FN LM G
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNG 576



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 190/400 (47%), Gaps = 41/400 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +L+  G +PN  TY+++I+ LC+TG  + A  +   M N          PD V+YTT
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR------IFPDNVVYTT 362

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  K G V    +L  +MK K I PD VTY S+I G C A    EA++LF EM+ +G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+ VT++ ++D  CK G+M+EA  L   M++ G+ PN   Y  L+DG C  G V+ A 
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM------------------- 226
           EL   M   G + NV +Y+ LING CK   IE A+ L  EM                   
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 227 ----------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                           L KG++PT+VT+N L  G      +E   +L   M   G+  + 
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             + + +   C    +   +E+++ +       D  +Y+ LI G CK+  +K AW L   
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +          +YN +I       K ++A  LF +M   G
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 187/357 (52%), Gaps = 6/357 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++K     P+ +TY+++I+GLC+ G  + A  LF EM++         KPD V YT 
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG------LKPDEVTYTA 432

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK G + +A  L  QM +K + P+VVTY +++ G C   + + A  L  EM ++G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +QPNV T++ +++ LCK G +E+A +L+E M   G  P+   Y T+MD +C  G + +A 
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   G +  + ++++L+NG+C +  +E    L   ML KGI P   T+N+L    
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
              + +    +++  M   GV  DT  Y   I G CK   + EA  L + +      L  
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            SY+ LI G  K  + + A +LF  +     IA+   Y+I +     +G  +   +L
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 198/396 (50%), Gaps = 17/396 (4%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA-----VIYTT 65
           K +G  P  + +      L   G  + A  LF++++N    +GV+   D+        + 
Sbjct: 175 KDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLN----YGVLVSVDSCNLFLARLSN 228

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
             DG      +  A  +  +  +  +  + V+YN ++   C      EA  L I+M  +G
Sbjct: 229 SFDG------IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRG 282

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+VV++SVI+D  C+  ++ +  +L+E + + G++PN + YN+++   C TGRV  A+
Sbjct: 283 NVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   M++     +   Y+ LI+G+ K+  +     L+ EM  K I P  VTY ++  GL
Sbjct: 343 QVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGL 402

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V  A KLF EM   G+  D   Y   IDG CK G + EA  L   +       ++
Sbjct: 403 CQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV 462

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L+DGLCK G + IA EL H +    L  +V TYN +I+ LC  G +++A  L  +
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE 522

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M+  G  PD + + T+M    +  E +K  ELL  M
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 158/289 (54%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A R+F E  + GV  N V++++I+  LC+ GK++EA  LL  M   G  P+   Y+ ++D
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C   ++ +  +L   ++  G K N ++Y+ +I+  CK   +  A  +   M ++ I P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             V Y TL  G  +   V   +KLFDEM+R  +  D   Y + I GLC+ G +VEA +LF
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +     + D  +Y+ LIDG CK+G +K A+ L + +    L  +VVTY  ++  LC  
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           G++D A++L  +M  KG+ P+   +N L+ G  +     + V+L+  MD
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G +PNV TY+ LINGLC+ G+   A+ L EEM +  G F     PD + 
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM-DLAGFF-----PDTIT 534

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTTI+D  CK G + KA ELL  M DK + P +VT+N ++ GFC +    + +RL   M+
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ PN  TF+ +M + C    M    ++ + M   GV P+   YN L+ G C    + 
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G      SY+ LI G+ K K+ E A  L+ EM + G       Y+   
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714

Query: 243 IGLFEIHQVERAFKLFDE 260
              +E    E   +L DE
Sbjct: 715 DVNYEEGNWENTLELCDE 732


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 201/363 (55%), Gaps = 14/363 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF+   A  C P+++TY+ L++G C+ G T  A +L +E++    E      P+  
Sbjct: 194 EAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVF 244

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ II+  CK   V++A E+ ++M + N  P+ VT+N++I GFC A    +A +LF EM
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 122 MDQGVQPNVVTFSVIMDELCKN-GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              G +  +VT++ ++D LCK  G +  A  L   +   G+ P    YN+L+ GFC   R
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A + F  ME   C  NV +YSILI+G CK + ++ A     +M + G  PTVVTY  
Sbjct: 365 LSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +++ A   F++M+  G A +T  + T IDGLCK     + L L   +    
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D+ +Y+CLI GLC + R++ A  LF  +       +V T+N +I  LCA  K+++A 
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEAR 540

Query: 361 DLF 363
           ++ 
Sbjct: 541 NIL 543



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 202/405 (49%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++F+ +K+ G  PN  T +TL+ GLC  G    AL LF EM    G F     P + 
Sbjct: 50  QAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM--QAGPF----LPTSA 103

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS----NEAKRL 117
            +  ++ G    G V  A   L  M+  + +    TYN V++G C+ N S     +A   
Sbjct: 104 SHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEF 163

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM   GV+P++ ++ +++  L  +G+M EA  L   M      P+   YN LMDG+C 
Sbjct: 164 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCK 220

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+   A+ L   +   G + NVF+YSI+IN YCK  ++E A  ++ +M+     P  VT
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEALELFRTL 296
           +NTL  G  +   +E A KLF EM++ G  A    Y T ID LCK  G +  A++LF  L
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                   I +Y+ LI G C + RL  A + F  +  G    +V+TY+I+I  LC   +M
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRM 399

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +A     DM+A G  P  V +  L+ G  +  E    +    +M
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 192/386 (49%), Gaps = 15/386 (3%)

Query: 21  TYSTLINGLCRTGHTI----VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           TY+ ++ GLC    +      A+  F+EM     E      PD   Y  ++  L   G +
Sbjct: 139 TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE------PDLESYHILLSALSDSGRM 192

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  L   M     +PD++TYN ++ G+C    + EA+ L  E++  G +PNV T+S+I
Sbjct: 193 AEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 249

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  CK  K+EEA ++   MI+    PNA  +NTL+ GFC  G +  A +LF  ME +GC
Sbjct: 250 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGC 309

Query: 197 KHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           K  + +Y+ LI+  CK +  +  A+ L++++   G+ PT+VTYN+L  G  +  ++  A 
Sbjct: 310 KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAM 369

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           + FDEM+    A +   Y   IDGLCK   + EA +    ++       + +Y  LI+G 
Sbjct: 370 QYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGF 428

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G LK A   F  +       + V +N +I  LC   + +    L   M A+G  PD 
Sbjct: 429 CKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDV 488

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + +N L+ G    N       L   M
Sbjct: 489 ITYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 144/294 (48%), Gaps = 46/294 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+    C PN +T++TLI G C+ G    A+ LF EM        + CK   V
Sbjct: 261 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK------IGCKATIV 314

Query: 62  IYTTIIDGLCKE-GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y T+ID LCK+ G V  A +L  +++   + P +VTYNS+I+GFC A   +EA + F E
Sbjct: 315 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE 374

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ---------------------- 158
           M +    PNV+T+S+++D LCK  +M+EA++ LE M                        
Sbjct: 375 M-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGE 433

Query: 159 -------------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                         G  PN  ++NTL+DG C   R N    L   M + GCK +V +Y+ 
Sbjct: 434 LKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNC 493

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           LI+G C    +E A  L+  M      P V T+N L  GL    +VE A  + D
Sbjct: 494 LISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 8/343 (2%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++ GL      D+A  L  ++      P+  TYN +IRGFC     ++A  +F +M   
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN  T + ++  LC+ G+M  A +L   M      P +  +N L+ GF + GRV  A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 185 KELFVSMESMGCKHNVFSYSILINGYC-KNK---EIEGALSLYSEMLSKGIKPTVVTYNT 240
                 M          +Y++++ G C +NK    +E A+  + EM + G++P + +Y+ 
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  ++  A  LF  M     + D   Y   +DG CK G   EA  L + +    
Sbjct: 182 LLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E ++ +YS +I+  CK  +++ AWE+F  +     + + VT+N +I   C  G ++ A 
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMD 402
            LF +ME  G     V +NTL+   C +       V+L ++++
Sbjct: 299 KLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 341



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 7/309 (2%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+++ G   A   ++A RLF E++     PN  T++V++   CK G+M +A  +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PNA   NTL+ G C  G+++ A +LF  M++        S++IL+ G+     +  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF----EIHQVERAFKLFDEMQRHGVAADTWAYR 274
           AL+   +M          TYN +  GL       +++E+A + F EM+  GV  D  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             +  L  +G + EA  LF     + C  DI +Y+ L+DG CK G+   A  L   + + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               +V TY+I+I+  C   K+++A ++F+ M      P+ V FNTL+ G  +       
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 395 VELLHRMDE 403
           ++L   M++
Sbjct: 298 IKLFAEMEK 306


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 214/407 (52%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +K+ G  P  + ++ +I GLCR G    AL ++ +M + +        PD +
Sbjct: 98  EAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-------PPDFL 150

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++ GL K G +  A ++L +M      PD  T   V++  C  +  ++A+ L  EM
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEA-SQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +G+  N +T+S ++D LCK  +++EA + LL  + + G  P+   Y+T++DG C  GR
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++F   E M C     +Y+ LI GYC+  +++ A+ L  +M+     P V+TY T
Sbjct: 271 LRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     ++ +++ A++LF +M  + ++ D   + + +DGLC  G + +ALEL   +    
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C   I +Y+C++DG CKS +++ A EL         + + VTYNI++   C  G+ D+A 
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447

Query: 361 DLFLDMEAK-GVAPDCVAFNTLMLGCI-RNNETSKVVELLHRMDERN 405
                + ++ G  P  VA   ++L  + R+  T   V+    M +R 
Sbjct: 448 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 205/401 (51%), Gaps = 12/401 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G  P+ +  +T++  LC    T  A+ LF++M     E G V   +   Y  
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKM----AELGAV---NHTTYYN 85

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LCK   +D+A  LLL MK + +NP  + +N VI G C A     A  ++ +M D  
Sbjct: 86  LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH 145

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+ +T++ ++  L K G++ +A Q+L+ M+     P+      ++   CL  RV+ A+
Sbjct: 146 -PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-LYSEMLSKGIKPTVVTYNTLFIG 244
           EL   M   G   N  +YS L++G CK + ++ A++ L  E+  +G  P +VTY+T+  G
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  ++  A  +F+EM     A     Y + I G C+ G + EA+ L   +    C  D
Sbjct: 265 LCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L+   CK GRL  A+ELF  +    L  DVVT+  ++  LC +G+M+ A +L  
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  +G  P    +N ++ G  ++N+  K  EL+     R 
Sbjct: 382 EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 46/332 (13%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A L  ++   G  P+++TYST+I+GLC+ G    A+++FEEM          C P A+ Y
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---------SCAPTAITY 290

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
            ++I G C+ G +D+A  LL +M D N  PDV+TY +++  FC     ++A  LF +M+ 
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
             + P+VVTF+ ++D LC  G+ME+A +LLE + + G  P  + YN ++DG+C + +V +
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 184 AKELFVSMESMG-------------------------------------CKHNVFSYSIL 206
           A+EL     S G                                     C  +V  Y+I+
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  C++   + A+  Y EM+ +G  P   T+ T+   L + HQ ++A +L +EM ++G 
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
                     +   C+ G I +A EL   LR+
Sbjct: 531 TPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 35/389 (8%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMING-----NGEFGVVCKP------------- 58
           P+ +TY+ L++GL + G    A+ + +EM++      N    VV +              
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 206

Query: 59  -----------DAVIYTTIIDGLCKEGFVDKAKELLL-QMKDKNINPDVVTYNSVIRGFC 106
                      +A+ Y+ ++DGLCK   +D+A  LLL ++  +   PD+VTY++VI G C
Sbjct: 207 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
            A    +A  +F EM      P  +T++ ++   C+ G M+EA +LL  M+     P+  
Sbjct: 267 KAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            Y TLM  FC  GR++ A ELF  M +     +V +++ L++G C    +E AL L  E+
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G  PT+ TYN +  G  + +QV +A +L  + +  G   +T  Y   + G C+ G  
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 287 VEALELFRTLRIL--KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            +AL+    L      C   +  Y+ ++D LC+ GR   A + +  + +   +    T+ 
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            ++ ALC   +  +AH+L  +M   G  P
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTP 532



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 42/322 (13%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEE-ASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+D G   +  TF+V++  L  + K+      LL+ +   G+ P+    NT++   C   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               A  LF  M  +G  ++   Y+ LI+  CK + ++ A+ L  +M S+G+ P  + +N
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR----- 294
            +  GL    ++  A  ++ +M       D   Y   + GL K G + +A+++ +     
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 295 -------TLRILKCEL-------DIR----------------SYSCLIDGLCKSGRLKIA 324
                  TL ++   L       D R                +YS L+DGLCK  RL  A
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 325 WE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
              L   + R     D+VTY+ +I  LC  G++  A D+F +M     AP  + +N+L+ 
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIG 295

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G  R  +  + + LL +M + N
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDN 317


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 208/388 (53%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E NV T + ++N LC+       +    +M  G G F      D V Y T+I+  C+E
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYCRE 305

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V++A +LL     + + P ++TYN+++ G C     + AK + IEM+  G+ PN  T+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++ E+C+   + EA ++ + M + GV P+   +++L+      G + +A   F  ME 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +   Y+ILI+G+C+N  +  AL +  EML++G    VVTYNT   GL +      
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF+EM   G+  D + + T I G CK+G + +AL LF  +     + D  +Y+ LID
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK+G +  A EL+  + R  +I D ++Y  +++  C+ G + +A +L   M  KG+ P
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V  NTL+ G  R+ +  K  E L +M
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F ++   G  P+++++S+LI  L R GH   AL  F EM       G+V  PD 
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PDN 432

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +IDG C+ G +  A ++  +M  +    DVVTYN+ + G C      +A  LF E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+  TF+ ++   CK+G M++A  L E M++  ++P+   YNTL+DGFC  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + RAKEL+  M       +  SY  ++NG+C +  +  AL+L  +ML KGI+P +VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G      + +A++   +M  +G+  D+++Y T IDG  K   + +A  L   +    
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I +Y+ +++G C  G+++ A ++   +    +  D  TY+ +I+   +   M +A 
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732

Query: 361 DLFLDMEAKGVAPD 374
               +M  +G+ PD
Sbjct: 733 RFHDEMLQRGLVPD 746



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 208/399 (52%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
             + ++  G   +++TY+TLIN  CR G    A  L     +   E      P  + Y  
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNA 332

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+ GLCK G  D+AK++L++M    + P+  TYN+++   C  ++  EA+ +F EM  +G
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P++V+FS ++  L +NG + +A      M + G+ P+  +Y  L+DGFC  G ++ A 
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   M + GC  +V +Y+  +NG CK K    A  L++EM+ +G+ P   T+ TL  G 
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +++A  LF+ M R  +  D   Y T IDG CK G +  A EL+  +       D 
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY  +++G C SG L  A  L   +    +  ++VT N +I   C  G M KA++    
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M + G+ PD  ++NTL+ G ++     K   L++ M++R
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E +  F  L+  G   ++   + L+ GL RTG   +A  ++ E++ G  E  V       
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYT----- 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ LCK+   +     L  M+ K +  D+VTYN++I  +C      EA +L    
Sbjct: 260 -LNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P ++T++ I+  LCK GK + A  +L  M+Q+G+ PNA  YNTL+   C    +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+E+F  M   G   ++ S+S LI    +N  +  AL  + EM   GI P  V Y  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +  A K+ DEM   G   D   Y TF++GLCK     +A  LF  +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI G CK G +  A  LF ++ R  L  D VTYN +I   C  G+M +A +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+ DM  K + PD +++ T++ G   +    + + L  +M E+
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 43  EEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
           E +I+    FG V     +IY  ++    +   + +  E    ++ K ++  +   N ++
Sbjct: 174 ESLISTCFYFGSV----GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLL 229

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            G       + A  ++ E++  G++ NV T +++++ LCK+ K E     L  M   GV 
Sbjct: 230 GGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVF 289

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            +   YNTL++ +C  G V  A +L  S  S G +  + +Y+ ++ G CK  + + A  +
Sbjct: 290 ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDV 349

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             EML  G+ P   TYNTL + +     +  A ++FDEM R GV  D  ++ + I  L +
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVV 341
           NG++ +AL  FR +       D   Y+ LIDG C++G L  A ++    L RG  + DVV
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM-DVV 468

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TYN  ++ LC       A  LF +M  +G+ PD   F TL+ G  ++    K + L   M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 402 DERN 405
              N
Sbjct: 529 VRTN 532


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G  PNV T++  I  L R G    A  +F  M +        C PD V YT 
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LC  G ++ AKEL ++MK     PD V Y +++  F    D +  K  + +M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+VVTF++++D LCK    +EA    ++M + G+ PN   YNTL+ G    GR+  A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L  +MES+G +   ++Y   I+ + K+ E   A+  + +M +KGI P +V  N     L
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EA+ L   +    CE D+
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              + LID L K+GR+  AW++F  +    L   VVTYN ++  L  +G++ KA +LF  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  K  +P+ ++FNTL+    +N+E    +++  +M
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 210/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   GC P+++TY+ LI+ LC  G    A  LF +M   NG      KPD V
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM-KANGH-----KPDQV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY T++D     G +D  KE   QM+     PDVVT+  ++   C A D +EA   F  M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN+ T++ ++  L + G++E+A +LL+ M  +GV+P A+ Y T +D F  +G  
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E F  M++ G   N+ + +  +    +   +  A ++++ +   G+ P  VTYN +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++ QV+ A  L  EM R+G   D     + ID L K G + EA ++F  ++ +K 
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+ GL K GR++ A ELF S+       + +++N ++   C + +++ A  
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALK 633

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  M      PD + +NT++ G I+ N+ +      H++
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 207/402 (51%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +   +  K++  G   N  +Y+ LI+ L ++G    AL ++  M++         KP   
Sbjct: 175 QMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG------LKPSLK 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++  L K+   +    LL +M+D  + P+V T+   IR    A   +EA  +F  M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P++VT++V++D LC  G++E A +L   M   G +P+  +Y TL+D F   G +
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  KE +  ME+ G   +V +++IL++  CK ++ + A + +  M  +GI P + TYNTL
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A KL D M+  GV    + Y TFID   K+G   +A+E F  ++    
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L + GRL+ A  +F+ L    L  D VTYN+M+      G++D+A +
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M   G  PD +  N+L+    +     +  ++  RM +
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 6/310 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +K  GC P+  T++ L+    ++G       L++EMI+        CKPDA+
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAI 859

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I  L K   +DKA +    +   +  P   TY  +I G        EA RLF EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G +PN   F+++++   K G  E A QL + M+  G+RP+   Y  L+D  CL GRV
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            + A   F  ++S G   +  +Y+ +ING  K++ +E AL+LY+EM ++GI P + TYN+L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             + L     VE+A ++++E+Q  G+  D + Y   I G   +     A  +++ + +  C
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099

Query: 302  ELDIRSYSCL 311
              +I +Y+ L
Sbjct: 1100 NPNIGTYAQL 1109



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 186/354 (52%), Gaps = 7/354 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            +++++A G  P+V+T++ L++ LC+      A   F+ M       G++  P+   Y T
Sbjct: 354 FWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ----GIL--PNLHTYNT 407

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL + G ++ A +LL  M+   + P   TY + I  F  + ++ +A   F +M  +G
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN+V  +  +  L + G++ EA  +   + + G+ P++  YN +M  +   G+V+ A 
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M   GC+ +V   + LI+   K   ++ A  ++  M    + PTVVTYNTL  GL
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V++A +LF+ M     + +T ++ T +D  CKN  +  AL++F  + ++ C+ D+
Sbjct: 588 GKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDV 647

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +Y+ +I GL K  ++  A+  FH L +  +  D VT   ++  L   G++  A
Sbjct: 648 LTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDA 700



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 207/440 (47%), Gaps = 44/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF  +    C PN I+++TL++  C+     +AL +F +M   +      CKPD +
Sbjct: 595  KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVL 648

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA------- 114
             Y T+I GL KE  V+ A     Q+K K+++PD VT  +++ G        +A       
Sbjct: 649  TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 115  --------KRLFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELM-------- 156
                     R F E +  G  V+  +    +  +EL  NG   E S L+ L+        
Sbjct: 708  MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 157  ------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
                         ++G+ P    YN L+          +A +LF  M+++GC  + F+++
Sbjct: 768  ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +L+  + K+ +I     LY EM+S+  KP  +TYN +   L + + +++A   F ++   
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                    Y   IDGL K G + EA+ LF  +    C+ +   ++ LI+G  K G  + A
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +LF  +    +  D+ +Y I++  LC  G++D+A   F ++++ G+ PD +A+N ++ G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 385  CIRNNETSKVVELLHRMDER 404
              ++    + + L + M  R
Sbjct: 1008 LGKSQRMEEALALYNEMRNR 1027



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 5/357 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            L+  LC+    + A  +F++     G       P    Y  +I  L +  + +KA +L  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
             MK+    PD  T+N ++     +    E   L+ EM+ +  +P+ +T+++++  L K+ 
Sbjct: 813  DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +++A      ++    RP    Y  L+DG    GR+  A  LF  M   GCK N   ++
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILINGY K  + E A  L+  M+++GI+P + +Y  L   L    +V+ A   F+E++  
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL K+  + EAL L+  +R      D+ +Y+ L+  L  +G ++ A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
              ++  L    L  DV TYN +I         + A+ ++ +M   G  P+   +  L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 32/413 (7%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-----LFEEMINGNGEF----- 52
            A   F +LK     P+ +T  TL+ GL + G    A++     +++     N  F     
Sbjct: 666  AFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 53   -GVVCKPD---AVIYTT--IIDGLCKEG---------FVDKAKELL-LQMKDK-----NI 91
             G + + +   A+I+    +++G+C+E               +EL   Q+ DK      I
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            +P + +YN +I      + + +A  LF +M + G  P+  TF++++    K+GK+ E  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            L + MI    +P+A  YN ++     +  +++A + F  + S   +    +Y  LI+G  
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            K   +E A+ L+ EM   G KP    +N L  G  +I   E A +LF  M   G+  D  
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +Y   +D LC  G + EAL  F  L+    + D  +Y+ +I+GL KS R++ A  L++ +
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                ++ D+ TYN ++  L   G +++A  ++ +++  G+ PD   +N L+ G
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 156/325 (48%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           + + D   Y TI   L   G + +   +L +M+      +  +YN +I     +    EA
Sbjct: 152 IIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEA 211

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M+ +G++P++ T+S +M  L K    E    LL+ M  +G+RPN + +   +  
Sbjct: 212 LEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRV 271

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               G+++ A E+F  M+  GC  ++ +Y++LI+  C   ++E A  L+ +M + G KP 
Sbjct: 272 LGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPD 331

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            V Y TL     +   ++   + + +M+  G   D   +   +D LCK     EA   F 
Sbjct: 332 QVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD 391

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      ++ +Y+ LI GL ++GR++ A +L  ++    +     TY   I      G
Sbjct: 392 VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSG 451

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFN 379
           +  KA + F  M+AKG+ P+ VA N
Sbjct: 452 ETGKAVETFEKMKAKGIVPNIVACN 476



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF ++  +GC+PN   ++ LING  + G T  A  LF+ M+N         +PD  
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG------IRPDLK 964

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT ++D LC  G VD+A     ++K   ++PD + YN +I G   +    EA  L+ EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ T++ +M  L   G +E+A ++ E +   G+ P+ F YN L+ G+ L+   
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              A  ++ +M   GC  N+ +Y+ L N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 1/299 (0%)

Query: 105 FCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           F   +D  E      E M + + + ++ T+  I   L   G + + + +L  M + G   
Sbjct: 131 FLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           NA+ YN L+     +G    A E++  M S G K ++ +YS L+    K ++ E  + L 
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM   G++P V T+      L    +++ A+++F  M   G   D   Y   ID LC  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G +  A ELF  ++    + D   Y  L+D     G L    E +  +     + DVVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            I++  LC     D+A   F  M  +G+ P+   +NTL+ G +R       ++LL  M+
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA   F +LK+ G +P+ I Y+ +INGL ++     AL L+ EM N     G+V  PD  
Sbjct: 981  EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR----GIV--PDLY 1034

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y +++  L   G V++AK +  +++   + PDV TYN++IRG+  + +   A  ++  M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 122  MDQGVQPNVVTFSVIMDE 139
            M  G  PN+ T++ + ++
Sbjct: 1095 MVDGCNPNIGTYAQLPNQ 1112



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 4/175 (2%)

Query: 233 PTVV-TYNT--LFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           PTV+ T  T    +    +H +VE    +F+ MQ+  +  D   Y T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
              +   +R     L+  SY+ LI  L +SG    A E++  +    L   + TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           AL      +    L  +ME  G+ P+   F   +    R  +  +  E+  RMD+
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 6/378 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F+++   G  P+ + Y+TLI+G C+ G    A   F EM + +        PD +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD------ITPDVL 387

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II G C+ G + +A +L  +M  K + PD VT+  +I G+C A    +A R+   M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNVVT++ ++D LCK G ++ A++LL  M +IG++PN F YN++++G C +G +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L    E+ G   +  +Y+ L++ YCK+ E++ A  +  EML KG++PT+VT+N L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E   KL + M   G+A +   + + +   C    +  A  +++ +     
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D ++Y  L+ G CK+  +K AW LF  +        V TY+++I       K  +A +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687

Query: 362 LFLDMEAKGVAPDCVAFN 379
           +F  M  +G+A D   F+
Sbjct: 688 VFDQMRREGLAADKEIFD 705



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 9/389 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  +F +    G   NV +Y+ +I+ +C+ G    A +L   M + G         PD +
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-------TPDVI 282

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+++G C+ G +DK  +L+  MK K + P+   Y S+I   C      EA+  F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P+ V ++ ++D  CK G +  AS+    M    + P+   Y  ++ GFC  G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   G + +  +++ LINGYCK   ++ A  +++ M+  G  P VVTY TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   ++ A +L  EM + G+  + + Y + ++GLCK+G I EA++L         
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ L+D  CKSG +  A E+   +    L   +VT+N++++  C  G ++    
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           L   M AKG+AP+   FN+L+   CIRNN
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNN 611



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 208/384 (54%), Gaps = 7/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH-TIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +F K+  +G   +V + +  +  L +  + T  A+ +F E      E GV    + 
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF----PEVGVCW--NV 246

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I  +C+ G + +A  LLL M+ K   PDV++Y++V+ G+C   + ++  +L   
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN   +  I+  LC+  K+ EA +    MI+ G+ P+  VY TL+DGFC  G 
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EM  KG++P  VT+  
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I +Y+ +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA 
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  +M  KG+ P  V FN LM G
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNG 570



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 165/297 (55%), Gaps = 6/297 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G EP+ +T++ LING C+ GH   A  +   MI         C P+ 
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 456

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YTT+IDGLCKEG +D A ELL +M    + P++ TYNS++ G C + +  EA +L  E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+  + VT++ +MD  CK+G+M++A ++L+ M+  G++P    +N LM+GFCL G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +   ++L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G+ P   TY  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           L  G  +   ++ A+ LF EM+  G +     Y   I G  K    +EA E+F  +R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 208/395 (52%), Gaps = 15/395 (3%)

Query: 11  KAFGCEPNV--ITYSTLIN-GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTI 66
           K +G +P V  + +  L++ GL R      A  +FE+M+N    +G+V   D+  +Y T 
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFEKMLN----YGLVLSVDSCNVYLTR 219

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           +   C +     A  +  +  +  +  +V +YN VI   C      EA  L + M  +G 
Sbjct: 220 LSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+V+++S +++  C+ G++++  +L+E+M + G++PN+++Y +++   C   ++  A+E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            F  M   G   +   Y+ LI+G+CK  +I  A   + EM S+ I P V+TY  +  G  
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +I  +  A KLF EM   G+  D+  +   I+G CK G++ +A  +   +    C  ++ 
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LIDGLCK G L  A EL H + +  L  ++ TYN +++ LC  G +++A  L  + 
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           EA G+  D V + TLM    ++ E  K  E+L  M
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           A  ++ +ML+ G+  +V + N     L  + ++   A  +F E    GV  +  +Y   I
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             +C+ G I EA  L   + +     D+ SYS +++G C+ G L   W+L   + R  L 
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +   Y  +I  LC   K+ +A + F +M  +G+ PD V + TL+ G  +  +     + 
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373

Query: 398 LHRMDERN 405
            + M  R+
Sbjct: 374 FYEMHSRD 381



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDA 60
           +   L   + A G  PN  T+++L+   C   +   A  ++++M + G G       PD 
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDG 631

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G CK   + +A  L  +MK K  +  V TY+ +I+GF       EA+ +F +
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M  +G+  +   F    D   K  + +     ++ +I+
Sbjct: 692 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 208/388 (53%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E NV T + ++N LC+       +    +M  G G F      D V Y T+I+  C+E
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYCRE 305

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V++A +LL     + + P ++TYN+++ G C     + AK + IEM+  G+ PN  T+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++ E+C+   + EA ++ + M + GV P+   +++L+      G + +A   F  ME 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +   Y+ILI+G+C+N  +  AL +  EML++G    VVTYNT   GL +      
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF+EM   G+  D + + T I G CK+G + +AL LF  +     + D  +Y+ LID
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK+G +  A EL+  + R  +I D ++Y  +++  C+ G + +A +L   M  KG+ P
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V  NTL+ G  R+ +  K  E L +M
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F ++   G  P+++++S+LI  L R GH   AL  F EM       G+V  PD 
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PDN 432

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +IDG C+ G +  A ++  +M  +    DVVTYN+ + G C      +A  LF E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+  TF+ ++   CK+G M++A  L E M++  ++P+   YNTL+DGFC  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + RAKEL+  M       +  SY  ++NG+C +  +  AL+L  +ML KGI+P +VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G      + +A++   +M  +G+  D+++Y T IDG  K   + +A  L   +    
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +I +Y+ +++G C  G+++ A ++   +    +  D  TY+ +I+   +   M +A 
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732

Query: 361 DLFLDMEAKGVAPD 374
               +M  +G+ PD
Sbjct: 733 RFHDEMLQRGLVPD 746



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 212/399 (53%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
             + ++  G   +++TY+TLIN  CR G    A     +++N     G+  +P  + Y  
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF----QLLNSFSSRGM--EPGLLTYNA 332

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+ GLCK G  D+AK++L++M    + P+  TYN+++   C  ++  EA+ +F EM  +G
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P++V+FS ++  L +NG + +A      M + G+ P+  +Y  L+DGFC  G ++ A 
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   M + GC  +V +Y+  +NG CK K    A  L++EM+ +G+ P   T+ TL  G 
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +++A  LF+ M R  +  D   Y T IDG CK G +  A EL+  +       D 
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY  +++G C SG L  A  L   +    +  ++VT N +I   C  G M KA++    
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M + G+ PD  ++NTL+ G ++     K   L++ M++R
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E +  F  L+  G   ++   + L+ GL RTG   +A  ++ E++ G  E  V       
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYT----- 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ LCK+   +     L  M+ K +  D+VTYN++I  +C      EA +L    
Sbjct: 260 -LNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P ++T++ I+  LCK GK + A  +L  M+Q+G+ PNA  YNTL+   C    +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+E+F  M   G   ++ S+S LI    +N  +  AL  + EM   GI P  V Y  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +  A K+ DEM   G   D   Y TF++GLCK     +A  LF  +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI G CK G +  A  LF ++ R  L  D VTYN +I   C  G+M +A +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+ DM  K + PD +++ T++ G   +    + + L  +M E+
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 43  EEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
           E +I+    FG V     +IY  ++    +   + +  E    ++ K ++  +   N ++
Sbjct: 174 ESLISTCFYFGSV----GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLL 229

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            G       + A  ++ E++  G++ NV T +++++ LCK+ K E     L  M   GV 
Sbjct: 230 GGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVF 289

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            +   YNTL++ +C  G V  A +L  S  S G +  + +Y+ ++ G CK  + + A  +
Sbjct: 290 ADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDV 349

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             EML  G+ P   TYNTL + +     +  A ++FDEM R GV  D  ++ + I  L +
Sbjct: 350 LIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVV 341
           NG++ +AL  FR +       D   Y+ LIDG C++G L  A ++    L RG  + DVV
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM-DVV 468

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TYN  ++ LC       A  LF +M  +G+ PD   F TL+ G  ++    K + L   M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 402 DERN 405
              N
Sbjct: 529 VRTN 532


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  220 bits (561), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 203/401 (50%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA    +K+   G   +  TY++LI G CR  +   A  +F  M N        C  + 
Sbjct: 221 VEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG------CLRNE 274

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I G C+   VD+A +L  QM + N  P V TY  +I   C      EA  +F E
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++  QPNV T++V++  LC++   ++A ++L  M++ G+ P+   YN L+DG+C  G 
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A E+   MES  C  N  +Y+ LI G+C+ K I  A+SL  +ML + ++P VVTYN 
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   +  A+KL   M   G+  D W Y  FID LCK G + EA  LF +L+   
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +   YS LIDG CK G++     L   +     + + +TYN +I   C +    +A 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M  + + P    +  L+   ++++E  +  ++  +M
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 192/402 (47%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF+++    C P V TY+ +I  LC+ G    ALN+F+EM   +      C+P+  
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH------CQPNVH 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  LC++   D AK++L  M +K + P VVTYN++I G+C    S  A  +   M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PN  T++ ++   C+   + +A  LL  M++  ++PN   YN L+ G C  G +
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   + ++YS+ I+  CK   +E A SL+  +  KGIK   V Y+TL
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +V     L D+M   G   ++  Y + IDG CK     EA  L   +     
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E    +Y+ LID L K      A ++F  +       DV  Y   IHA C+ G++  A  
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   M AKG+ PD + +   +    R         +L RM E
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 201/436 (46%), Gaps = 71/436 (16%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+TY+ LI+G C+ G +  AL +   M + N      C P+A  Y  +I G C+ 
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN------CSPNARTYNELILGFCRG 427

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + KA  LL +M ++ + P+VVTYN +I G C   D   A +L   M + G+ P+  T+
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTY 487

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           SV +D LCK G +EEA  L E + + G++ N  +Y+TL+DG+C  G+V+  + L   M S
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N  +Y+ LI+GYCK K  + A  L   M+ + I+P   TY  L   L +  + ++
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA------------------------ 289
           A  +FD+M   G   D + Y  FI   C +G + +A                        
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667

Query: 290 -----------LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA-------------- 324
                        + + +  + CE    +YSCLI  L  +   +++              
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 325 ------W---------ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
                 W         +LF  +       +  TY   I  LC  G ++ AH LF  M+ K
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787

Query: 370 GVAPDCVAFNTLMLGC 385
           G +P+   +N+L LGC
Sbjct: 788 GQSPNEDIYNSL-LGC 802



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 146/299 (48%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+ K + L+M D  + P++ T N+++ G+C   +  EA+    +++  G+  +  T++ 
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C+N  ++ A+ +   M   G   N   Y  L+ GFC   RV+ A +LF  M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C   V +Y+++I   C+      AL+++ EM  K  +P V TY  L   L E    + A 
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           K+ + M   G+      Y   IDG CK G    ALE+   +    C  + R+Y+ LI G 
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           C+   +  A  L H +    L  +VVTYNI+IH  C +G +  A+ L   M   G+ PD
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 185/412 (44%), Gaps = 35/412 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF  LK  G + N + YSTLI+G C+ G       L ++M++        C P+++
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG------CVPNSI 555

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++IDG CKE    +A+ L+  M  ++I P   TY  +I      ++ ++A  +F +M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V  ++  +   C +G++++A  L+  M   G+ P+  +Y   +D +   G +
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675

Query: 182 NRAKELFVSMESMGCKHNVFSYSILIN--GYCKNKEI----------------------- 216
           + A  +   M  +GC+ + ++YS LI      K KE+                       
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWR 735

Query: 217 ----EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               E  L L+ +M   G  P   TY     GL ++  +E A +LFD M+  G + +   
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y + +   C+ G   EA+     +   +    + S   L+ GL   G  + A  +F S  
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFL 855

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +     D + + ++I  L   G  DK  DLF  ME +G       ++ L+ G
Sbjct: 856 QCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 144/292 (49%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +E K +++EM+D  V PN+ T + +++  CK G + EA   +  ++Q G+  + F Y +L
Sbjct: 186 DEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSL 245

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G+C    V+ A  +F+SM + GC  N  SY+ LI+G+C+ + ++ AL L+S+M     
Sbjct: 246 ILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNC 305

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            PTV TY  +   L ++ +   A  +F EM       +   Y   I  LC++    +A +
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKK 365

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   +        + +Y+ LIDG CK G    A E+   +       +  TYN +I   C
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
               + KA  L   M  + + P+ V +N L+ G  +  +     +LL  M+E
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNE 477



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 12/307 (3%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL---------MIQ 158
           + DS+E     +EM+ + +   V  F   +   C N  +   S+ L +         M+ 
Sbjct: 139 STDSSENALFVLEML-RSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLD 197

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKEIE 217
             V PN F  NT+++G+C  G V  A EL+VS +   G   + F+Y+ LI GYC+NK ++
Sbjct: 198 DMVTPNIFTLNTMVNGYCKLGNVVEA-ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVD 256

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +++  M +KG     V+Y  L  G  E  +V+ A KLF +M           Y   I
Sbjct: 257 AANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVII 316

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             LC+ G   EAL +F+ +    C+ ++ +Y+ LI  LC+      A ++ + +    LI
Sbjct: 317 FALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLI 376

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             VVTYN +I   C  G    A ++   ME+   +P+   +N L+LG  R     K + L
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSL 436

Query: 398 LHRMDER 404
           LH+M ER
Sbjct: 437 LHKMLER 443



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 35/244 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV------------------------- 37
           A  +  ++   GCEP+  TYS LI  L       V                         
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRV 737

Query: 38  ----ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                L+LF +M     E G  C P+A  Y   I GLCK G ++ A  L   MK+K  +P
Sbjct: 738 DYEFTLDLFGKM----AEHG--CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +   YNS++   C      EA R    M++    P++ +  +++  L   G  E+A ++ 
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
              +Q     +  V+  L+DG    G  ++  +LF  ME+ GC+ +  +YS+LI G+   
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911

Query: 214 KEIE 217
           +EI+
Sbjct: 912 QEID 915



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 35/280 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+ A G  P+ + Y+  I+   R G    A  + + M        V C+P   
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM------HEVGCEPSYY 695

Query: 62  IYTTIID---------------------GLCKEGFVDKAK--------ELLLQMKDKNIN 92
            Y+ +I                      G+    F +  +        +L  +M +    
Sbjct: 696 TYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCA 755

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TY   I G C       A RLF  M ++G  PN   ++ ++   C+ G   EA + 
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRW 815

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L++MI+    P+      L+ G    G   +AK +F S       ++   + +LI+G  K
Sbjct: 816 LDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLK 875

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
               +    L+  M ++G +    TY+ L  G   I +++
Sbjct: 876 KGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +L  FG  PNV+ Y+TLI+G C+ G    A +LF EM    G+ G+V   +   YT 
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLVA--NERTYTV 238

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+GL K G   +  E+  +M++  + P++ TYN V+   C    + +A ++F EM ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V  N+VT++ ++  LC+  K+ EA+++++ M   G+ PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+C+  +  GA  +  EM  +GIKP+ VTY  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+++    CE + 
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I G CK G    A +L   +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 539 MIDSGIDPS 547



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 203/384 (52%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V ++  LI G C  G    + +L  E+     EFG    P+ VIYTT+IDG CK+G ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KAK+L  +M    +  +  TY  +I G        +   ++ +M + GV PN+ T++ +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           ++LCK+G+ ++A Q+ + M + GV  N   YNTL+ G C   ++N A ++   M+S G  
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C   ++  ALSL  ++ S+G+ P++VTYN L  G         A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+  G+      Y   ID   ++  + +A++L  ++  L    D+ +YS LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G++  A  LF S+       + V YN MI   C +G   +A  L  +ME K +AP+  +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +  ++    +  ++ +   L+ +M
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKM 539



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 188/346 (54%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   +  +I G C+ G ++K+ +LL+++ +   +P+VV Y ++I G C   +  +AK LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G+  N  T++V+++ L KNG  ++  ++ E M + GV PN + YN +M+  C  
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR   A ++F  M   G   N+ +Y+ LI G C+  ++  A  +  +M S GI P ++TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  G   + ++ +A  L  +++  G++     Y   + G C+ G    A ++ + +  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +    +Y+ LID   +S  ++ A +L  S+    L+ DV TY+++IH  C  G+M++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF  M  K   P+ V +NT++LG  +   + + ++LL  M+E+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 41/326 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLING--------------------------------- 28
           +A  LF ++   G   N  TY+ LING                                 
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 29  --LCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
             LC+ G T  A  +F+EM     E GV C  + V Y T+I GLC+E  +++A +++ QM
Sbjct: 276 NQLCKDGRTKDAFQVFDEM----RERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K   INP+++TYN++I GFC      +A  L  ++  +G+ P++VT+++++   C+ G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A+++++ M + G++P+   Y  L+D F  +  + +A +L +SME +G   +V +YS+L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+C   ++  A  L+  M+ K  +P  V YNT+ +G  +     RA KL  EM+   +
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 267 AADTWAYRTFIDGLCKNGYIVEALEL 292
           A +  +YR  I+ LCK     EA  L
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERL 535



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 152/269 (56%), Gaps = 6/269 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G   N++TY+TLI GLCR     + LN   ++++     G+   P+ +
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCRE----MKLNEANKVVDQMKSDGI--NPNLI 339

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C  G + KA  L   +K + ++P +VTYN ++ GFC   D++ A ++  EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ VT+++++D   ++  ME+A QL   M ++G+ P+   Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  LF SM    C+ N   Y+ +I GYCK      AL L  EM  K + P V +Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              L +  + + A +L ++M   G+   T
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 170/379 (44%), Gaps = 54/379 (14%)

Query: 79  AKELLLQMKDKNINPDVVT--------------------YNSVIRGFCYANDSNEAKRLF 118
           A+ LLLQ+    I+    T                    Y  +I  +  +   N +   F
Sbjct: 58  AQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYF 117

Query: 119 IEMMDQGVQP----------------------------------NVVTFSVIMDELCKNG 144
            EM+D G  P                                  +V +F +++   C+ G
Sbjct: 118 NEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAG 177

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++E++  LL  + + G  PN  +Y TL+DG C  G + +AK+LF  M  +G   N  +Y+
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LING  KN   +    +Y +M   G+ P + TYN +   L +  + + AF++FDEM+  
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV+ +   Y T I GLC+   + EA ++   ++      ++ +Y+ LIDG C  G+L  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   L    L   +VTYNI++   C  G    A  +  +ME +G+ P  V +  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 385 CIRNNETSKVVELLHRMDE 403
             R++   K ++L   M+E
Sbjct: 418 FARSDNMEKAIQLRLSMEE 436



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 33/197 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A +L   LK+ G  P+++TY+ L++G CR G T  A  + +EM                
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415

Query: 50  -------------------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                               E G+V  PD   Y+ +I G C +G +++A  L   M +KN
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLV--PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             P+ V YN++I G+C    S  A +L  EM ++ + PNV ++  +++ LCK  K +EA 
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 151 QLLELMIQIGVRPNAFV 167
           +L+E MI  G+ P+  +
Sbjct: 534 RLVEKMIDSGIDPSTSI 550



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF  +    CEPN + Y+T+I G C+ G +  AL L +EM            P+  
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE------LAPNVA 514

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            Y  +I+ LCKE    +A+ L+ +M D  I+P     + + R     NDS+ + +
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA---KNDSHVSSK 566


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 227/468 (48%), Gaps = 66/468 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  LF ++   G  PN +TYS LI+  CR G    AL+   EM               I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444

Query: 47  NGNGEFGVVC--------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG+ +FG +               +P  V YT+++ G C +G ++KA  L  +M  K I 
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + T+ +++ G   A    +A +LF EM +  V+PN VT++V+++  C+ G M +A + 
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G+ P+ + Y  L+ G CLTG+ + AK     +    C+ N   Y+ L++G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E ALS+  EM+ +G+   +V Y  L  G  +    +  F L  EM   G+  D   
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG------------- 319
           Y + ID   K G   EA  ++  +    C  +  +Y+ +I+GLCK+G             
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744

Query: 320 -----------------------RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                                   ++ A EL +++ +G L+A+  TYN++I   C  G++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFCRQGRI 803

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++A +L   M   GV+PDC+ + T++    R N+  K +EL + M E+
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 210/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L     +P+V+TY TL+ GLC+     + L + +EM+       +   P   
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML------CLRFSPSEA 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +++++GL K G +++A  L+ ++ D  ++P++  YN++I   C     +EA+ LF  M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PN VT+S+++D  C+ GK++ A   L  M+  G++ + + YN+L++G C  G +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+     M +   +  V +Y+ L+ GYC   +I  AL LY EM  KGI P++ T+ TL
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF    +  A KLF+EM    V  +   Y   I+G C+ G + +A E  + +     
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY  LI GLC +G+   A      L +G    + + Y  ++H  C +GK+++A  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +M  +GV  D V +  L+ G +++ +      LL  M +R
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 204/401 (50%), Gaps = 9/401 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  + + G  P+V  Y+ +I  LC     +  L+  +EMI      G  C  + V 
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCE----LKDLSRAKEMIAHMEATG--CDVNIVP 264

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDGLCK+  V +A  +   +  K++ PDVVTY +++ G C   +      +  EM+
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                P+    S +++ L K GK+EEA  L++ ++  GV PN FVYN L+D  C   + +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ LF  M  +G + N  +YSILI+ +C+  +++ ALS   EM+  G+K +V  YN+L 
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   +  A     EM    +      Y + + G C  G I +AL L+  +      
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             I +++ L+ GL ++G ++ A +LF+ +    +  + VTYN+MI   C +G M KA + 
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV---VELLHR 400
             +M  KG+ PD  ++  L+ G     + S+    V+ LH+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 182/383 (47%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  FG  PN+  Y+ LI+ LC+      A  LF+ M    G+ G+  +P+ V
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGL--RPNDV 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +ID  C+ G +D A   L +M D  +   V  YNS+I G C   D + A+    EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P VVT++ +M   C  GK+ +A +L   M   G+ P+ + + TL+ G    G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M     K N  +Y+++I GYC+  ++  A     EM  KGI P   +Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    Q   A    D + +     +   Y   + G C+ G + EAL + + +     
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+  Y  LIDG  K    K+ + L   +    L  D V Y  MI A    G   +A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M  +G  P+ V +  ++ G
Sbjct: 704 IWDLMINEGCVPNEVTYTAVING 726



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 203/411 (49%), Gaps = 47/411 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++   G  P++ T++TL++GL R G    A+ LF EM   N       KP+ V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRV 543

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C+EG + KA E L +M +K I PD  +Y  +I G C    ++EAK +F++ 
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV------------------- 161
           + +G  + N + ++ ++   C+ GK+EEA  + + M+Q GV                   
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                           +P+  +Y +++D    TG    A  ++  M + GC  N  +Y+ 
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV--ERAFKLFDEMQR 263
           +ING CK   +  A  L S+M      P  VTY   F+ +    +V  ++A +L + + +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILK 781

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G+ A+T  Y   I G C+ G I EA EL   +       D  +Y+ +I+ LC+   +K 
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           A EL++S+    +  D V YN +IH  C  G+M KA +L  +M  +G+ P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 171/384 (44%), Gaps = 5/384 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           +  LI    R+   +  + +F+ MI       V   P+    + ++ GL K      A E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITK-----VSLLPEVRTLSALLHGLVKFRHFGLAME 213

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L   M    I PDV  Y  VIR  C   D + AK +   M   G   N+V ++V++D LC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K  K+ EA  + + +    ++P+   Y TL+ G C         E+   M  +    +  
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + S L+ G  K  +IE AL+L   ++  G+ P +  YN L   L +  +   A  LFD M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + G+  +   Y   ID  C+ G +  AL     +     +L +  Y+ LI+G CK G +
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A      +    L   VVTY  ++   C+ GK++KA  L+ +M  KG+AP    F TL
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R       V+L + M E N
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWN 537



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 31/304 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA      L    CE N I Y+ L++G CR G    AL++ +EM+    +  +VC     
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   KPD VIYT++ID   K G   +A  +   M ++   
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG-KMEEASQ 151
           P+ VTY +VI G C A   NEA+ L  +M      PN VT+   +D L K    M++A +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   +++ G+  N   YN L+ GFC  GR+  A EL   M   G   +  +Y+ +IN  C
Sbjct: 775 LHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  +++ A+ L++ M  KGI+P  V YNTL  G     ++ +A +L +EM R G+  +  
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893

Query: 272 AYRT 275
             RT
Sbjct: 894 TSRT 897



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 53/260 (20%)

Query: 195 GCKHNVFSYSILING--------------------------------------------- 209
           G  H+  S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158

Query: 210 -------YCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
                  Y +++ +   + ++  M++K  + P V T + L  GL +      A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  D + Y   I  LC+   +  A E+   +    C+++I  Y+ LIDGLCK  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  +   L    L  DVVTY  +++ LC   + +   ++  +M     +P   A ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  +  +  + + L+ R+
Sbjct: 339 VEGLRKRGKIEEALNLVKRV 358


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 205/391 (52%), Gaps = 13/391 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+T++ LI G C+      A  +F+EMI  N      C+PD  +Y  +IDG CKE
Sbjct: 41  GIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNR-----CQPDCFLYGVLIDGYCKE 95

Query: 74  GFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE-MMDQGVQPNVV 131
             +D+A ELL +M+ ++ I PDVV YNS++ G C +N   EA +   E M+ QG  P VV
Sbjct: 96  LRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVV 155

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++ ++   CK  KM+ A  +   M++  ++P    Y+ ++DG    GRV  A  +   M
Sbjct: 156 TYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREM 215

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E++GC+ NV  Y+ LI+G CK+  ++ A +LY  M   G  P   TY TL        + 
Sbjct: 216 ETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRT 275

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A  LFD + R     D   Y   + GLC+   + +A  LFR +R+     D  +Y+ L
Sbjct: 276 ETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 334

Query: 312 IDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           + G  +SGR + A+ +   L      +A+++TYN +I   C +  M     LF +M  +G
Sbjct: 335 LHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGM----VLFYEMRQRG 390

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +APD   ++ L+   + + E  +  +L   M
Sbjct: 391 IAPDFATYSALIDRLLGSGEIRRAFDLCEEM 421



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   + ++ID L K   +  A   L  M D  I+PDVVT+ ++IRGFC       A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 118 FIEMMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGF 175
           F EM+     QP+   + V++D  CK  +M+ A +LL E+ ++  ++P+  +YN+++DG 
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 176 CLTGRVNRA-KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           C + R   A K L  +M   GC   V +Y+ LI G CK K+++ A+++++ ML + I+PT
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +V+Y+ +  GL +  +V  A+++  EM+  G   +   Y T IDGLCK+G++ +A  L+R
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++      + R+Y+ LID  C++ R + A  LF  + R     DV  Y  ++  LC + 
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRER 307

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++D A  LF +M   GV+ D  A+N L+ G  R+  + +   +L  +
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEEL 354



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 14/234 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  GCE NV+ Y+TLI+GLC++G    A  L+  ++  +G F     P+  
Sbjct: 207 DAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY-RIMKRSGAF-----PNQR 260

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID  C+    + A  L   ++D     DV  Y +V+ G C     ++A+ LF EM
Sbjct: 261 TYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTAVVSGLCRERRLDDARALFREM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCL-TG 179
              GV  +   ++V++    ++G+ EEA ++L EL    G   N   YNT++ G CL +G
Sbjct: 320 RLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESG 379

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            V     LF  M   G   +  +YS LI+    + EI  A  L  EML+ G+ P
Sbjct: 380 MV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSP 428


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +K  G +PNV TY+  I   CRT     A +L+E M+      GV+   D V 
Sbjct: 223 ARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVT 276

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + ++ GLC++G   +A  L  +M      P+ VTY ++I     A    E   L  EM+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  ++VT++ +MD L K GK +E    L   +   + PN   Y  L+D  C    V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++ + ME      NV ++S +ING+ K   ++ A      M  +GI P VVTY TL 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    + A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  +Y+ LIDGL K+G +  A++    L    ++ D V YN+ I+ LC  GK  +A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M   G+ PD   +NT+++   R  ET+K ++LLH M
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY TLI+ L + G     L+L  EM++     GVV   D V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D L K+G  D+ K+ L      N++P+ VTY  +I   C A++ +EA+++ +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVVTFS +++   K G +++A++   +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+    V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I   C+ G    A +L H +    +  +++TYN ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M + G +P  +    ++  C ++     ++++   M
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 195/400 (48%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+  +   G   +V+T S L+ GLCR G    A  LF EM        V   P+ V
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK------VGAAPNHV 310

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L K G   +   LL +M  + +  D+VTY +++        ++E K      
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PN VT++V++D LCK   ++EA Q+L  M +  + PN   ++++++GF   G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E    M+  G   NV +Y  LI+G+ K +  + AL +Y +ML +G+K      ++L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  LF +    G++ D   Y T IDGL K G +  A +  + L     
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC  G+ K A      +    L  D  TYN MI + C  G+  KA  
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+   + P+ + +NTL+ G        K   LL+ M
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 192/438 (43%), Gaps = 76/438 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF      G   + + Y+TLI+GL + G    A    +E+++ N        PDAV
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN------MLPDAV 555

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC  G   +AK  L +M++  + PD  TYN++I   C   ++ +A +L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF--------------- 166
               ++PN++T++ ++  L   G +E+A  LL  M+  G  P++                
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 167 --------------------VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                               VYNTL+   C  G   +A  +   M   G   +  +++ L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK+  ++ A + Y++ML + I P + T+NTL  GL  + ++  A  +  EM++ G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y     G  K    VEA+ L+       CE+  + +                  
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGF------------------ 830

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                     +  V TYN +I      G M +A +LF DM+ +GV P    ++ L+ G  
Sbjct: 831 ----------VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 387 RNNETSKVVELLHRMDER 404
           R    ++V + L  M E+
Sbjct: 881 RIRNGTEVKKCLKDMKEK 898



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 10/351 (2%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P  V Y  ++  L        A  +L +M  + +  D VT N+++ G C   +      
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLC--RNGQVDAA 154

Query: 117 LFIEMMDQGVQP---NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
             +     G+ P   +  T S++  ++   G    A  + + M   G+  +   YNTL+ 
Sbjct: 155 AALADRAGGITPWMSSAGTLSLL--DIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  G+V+ A+ +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVT + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E L L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+ +Y+ L+D L K G+     +         L  + VTY ++I ALC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +D+A  + L+ME K ++P+ V F++++ G ++     K  E    M ER
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 29/324 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           +A  L  ++K    +PN+ITY+TL+ GL  TG    A  L  EM++       +      
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 58  -------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                     D  +Y T++  LC  G   KA  +L +M    I 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +T+N++I G C ++  + A   + +M+ Q + PN+ TF+ ++  L   G++ EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ LI+ + K
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+  G +     
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 273 YRTFIDGLCKNGYIVEALELFRTL 296
                    K G   +A  L + L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G EPN +TY  L  G  +  + + A+ L+ EM+ G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    K G + +AKEL   M+ + ++P   TY+ ++ G+    +  E K+   +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            ++G  P+  T S I     K G   +A +LL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P V TY+ LI+   + G    A  LF++M     + GV   P +
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM----QKRGV--HPTS 869

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  ++ G  +     + K+ L  MK+K  +P   T + + R F     + +A+RL 
Sbjct: 870 CTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 6/378 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA   F+++   G  P+ + Y+TLI+G C+ G    A   F EM + +        PD +
Sbjct: 777  EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD------ITPDVL 830

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT II G C+ G + +A +L  +M  K + PD VT+  +I G+C A    +A R+   M
Sbjct: 831  TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  G  PNVVT++ ++D LCK G ++ A++LL  M +IG++PN F YN++++G C +G +
Sbjct: 891  IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 950

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +L    E+ G   +  +Y+ L++ YCK+ E++ A  +  EML KG++PT+VT+N L
Sbjct: 951  EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 1010

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              G      +E   KL + M   G+A +   + + +   C    +  A  +++ +     
Sbjct: 1011 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 1070

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              D ++Y  L+ G CK+  +K AW LF  +        V TY+++I       K  +A +
Sbjct: 1071 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 1130

Query: 362  LFLDMEAKGVAPDCVAFN 379
            +F  M  +G+A D   F+
Sbjct: 1131 VFDQMRREGLAADKEIFD 1148



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 9/389 (2%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
            A  +F +    G   NV +Y+ +I+ +C+ G    A +L   M + G         PD +
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-------TPDVI 725

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y+T+++G C+ G +DK  +L+  MK K + P+   Y S+I   C      EA+  F EM
Sbjct: 726  SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 785

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + QG+ P+ V ++ ++D  CK G +  AS+    M    + P+   Y  ++ GFC  G +
Sbjct: 786  IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 845

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +LF  M   G + +  +++ LINGYCK   ++ A  +++ M+  G  P VVTY TL
Sbjct: 846  VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 905

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              GL +   ++ A +L  EM + G+  + + Y + ++GLCK+G I EA++L         
Sbjct: 906  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              D  +Y+ L+D  CKSG +  A E+   +    L   +VT+N++++  C  G ++    
Sbjct: 966  NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025

Query: 362  LFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            L   M AKG+AP+   FN+L+   CIRNN
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 208/384 (54%), Gaps = 7/384 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH-TIVALNLFEEMINGNGEFGVVCKPDA 60
            EA  +F K+  +G   +V + +  +  L +  + T  A+ +F E      E GV    + 
Sbjct: 636  EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF----PEVGVCW--NV 689

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  +I  +C+ G + +A  LLL M+ K   PDV++Y++V+ G+C   + ++  +L   
Sbjct: 690  ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M  +G++PN   +  I+  LC+  K+ EA +    MI+ G+ P+  VY TL+DGFC  G 
Sbjct: 750  MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EM  KG++P  VT+  
Sbjct: 810  IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 870  LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             + +I +Y+ +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA 
Sbjct: 930  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 361  DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++  +M  KG+ P  V FN LM G
Sbjct: 990  EILKEMLGKGLQPTIVTFNVLMNG 1013



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 165/297 (55%), Gaps = 6/297 (2%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  LF ++   G EP+ +T++ LING C+ GH   A  +   MI         C P+ 
Sbjct: 846  VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 899

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V YTT+IDGLCKEG +D A ELL +M    + P++ TYNS++ G C + +  EA +L  E
Sbjct: 900  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                G+  + VT++ +MD  CK+G+M++A ++L+ M+  G++P    +N LM+GFCL G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +   ++L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G+ P   TY  
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
            L  G  +   ++ A+ LF EM+  G +     Y   I G  K    +EA E+F  +R
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 208/395 (52%), Gaps = 15/395 (3%)

Query: 11  KAFGCEPNV--ITYSTLIN-GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTI 66
           K +G +P V  + +  L++ GL R      A  +FE+M+N    +G+V   D+  +Y T 
Sbjct: 612 KDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFEKMLN----YGLVLSVDSCNVYLTR 662

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           +   C +     A  +  +  +  +  +V +YN VI   C      EA  L + M  +G 
Sbjct: 663 LSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 720

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+V+++S +++  C+ G++++  +L+E+M + G++PN+++Y +++   C   ++  A+E
Sbjct: 721 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 780

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            F  M   G   +   Y+ LI+G+CK  +I  A   + EM S+ I P V+TY  +  G  
Sbjct: 781 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +I  +  A KLF EM   G+  D+  +   I+G CK G++ +A  +   +    C  ++ 
Sbjct: 841 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LIDGLCK G L  A EL H + +  L  ++ TYN +++ LC  G +++A  L  + 
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           EA G+  D V + TLM    ++ E  K  E+L  M
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           A  ++ +ML+ G+  +V + N     L  + ++   A  +F E    GV  +  +Y   I
Sbjct: 637 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 696

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             +C+ G I EA  L   + +     D+ SYS +++G C+ G L   W+L   + R  L 
Sbjct: 697 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 756

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +   Y  +I  LC   K+ +A + F +M  +G+ PD V + TL+ G  +  +     + 
Sbjct: 757 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 816

Query: 398 LHRMDERN 405
            + M  R+
Sbjct: 817 FYEMHSRD 824



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDA 60
            +   L   + A G  PN  T+++L+   C   +   A  ++++M + G G       PD 
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDG 1074

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  ++ G CK   + +A  L  +MK K  +  V TY+ +I+GF       EA+ +F +
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 1134

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
            M  +G+  +   F    D   K  + +     ++ +I+
Sbjct: 1135 MRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 229/507 (45%), Gaps = 110/507 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +PNV+ Y+TL++G  + G    A ++  EMI+     GV  +P+ +
Sbjct: 333 EAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA----GV--QPNKI 386

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +I GLCK G + +A +LL +M      PD  TY+ +++G     D + A  L  EM
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY------------- 168
            + G+ PN  T+ ++++ LC+NG+ +EA  LLE MI  G++PNAF+Y             
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 169 ----------------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                 N+L+ G    GR+  A+E +  ++  G   + F+YS L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER------------- 253
           I+GYCK + +E A  L  +ML+ G+KP   TY  L  G F+ +  E+             
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 254 ----------------------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                                 AF +  E++++G+  D   Y + I GLCK   + +A+ 
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +     E  I  Y+ LIDG C+SG +  A  +F S+    L+ + VTY  +I   C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC-------------------------- 385
            +G +  A DL+ DM  +G+APD   +N L  GC                          
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL 806

Query: 386 --------IRNNETSKVVELLHRMDER 404
                    +     +  +LLH M +R
Sbjct: 807 FSTLVRGFCKRGRLQETEKLLHVMMDR 833



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAF----GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           +A  L  KLK F    G  P+V TYST +   C+      A  +FEEM   +      C 
Sbjct: 224 DAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRD------CA 277

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            + V Y  +I GLC+ G V++A     +M D  ++PD  TY +++ G C      EAK L
Sbjct: 278 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKAL 337

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM   G++PNVV ++ ++D   K GK  EA  +L  MI  GV+PN  +Y+ L+ G C 
Sbjct: 338 LDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK 397

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++ RA +L   M  +G + + F+Y  L+ G+ ++ + +GA  L +EM + GI P   T
Sbjct: 398 IGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  +  GL +  + + A  L +EM   G+  + + Y   I G  K G+I  A E    + 
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  Y+ LI GL   GR++ A E +  + +  L+ D  TY+ +IH  C    ++
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           KA  L   M   G+ P+   +  L+ G  ++N+  KV  +L  M
Sbjct: 578 KADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 180/377 (47%), Gaps = 23/377 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +++  G  P+  TYS LI+G C+T +   A  L ++M+N         KP+A 
Sbjct: 543 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG------LKPNAD 596

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K    +K   +L  M      PD   Y  VIR    + +   A  +  E+
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 656

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++  +S ++  LCK   ME+A  LL+ M + G+ P    YN L+DGFC +G +
Sbjct: 657 EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 716

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA+ +F S+ + G   N  +Y+ LI+G CKN +I  A  LY +ML +GI P    YN L
Sbjct: 717 SRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVL 776

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +E+A  L +EM   G A  +  + T + G CK G + E  +L   +   + 
Sbjct: 777 ATGCSDAADLEQALFLTEEMFNRGYAHVSL-FSTLVRGFCKRGRLQETEKLLHVMMDREI 835

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             + ++   +I    K+G+L  A  +F  L +                  +    D+   
Sbjct: 836 VPNAQTVENVITEFGKAGKLCEAHRVFAELQQ---------------KKASQSSTDRFSL 880

Query: 362 LFLDMEAKG-VAPDCVA 377
           LF DM  KG + P C A
Sbjct: 881 LFTDMINKGLIPPKCDA 897



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 19/408 (4%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP--------DA-------- 60
           P+   ++ L   LC   H   A  L  +MI  +    +V           DA        
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172

Query: 61  ---VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
               +   ++D   K G V  A +++L M D  + P     N +++    A+      +L
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL 232

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G+ P+V T+S  ++  CK    + A ++ E M +     N   YN ++ G C 
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G V  A      M   G   + F+Y  L+NG CK   ++ A +L  EM   G+KP VV 
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G  +  +   AF + +EM   GV  +   Y   I GLCK G +  A +L   + 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D  +Y  L+ G  +      A+EL + +    ++ +  TY IMI+ LC +G+  
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A +L  +M ++G+ P+   +  L++G  +    S   E L  M + N
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 10/347 (2%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +  P A  +  +   LC      +A  LL QM   + +P +V   S+ R      DS+  
Sbjct: 110 IAPPSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLV-LASIQRAI---QDSDAR 165

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                      V        V++D   KNG +  A+Q++ +M  +G+ P     N L+  
Sbjct: 166 SPSPSPSHSTAV------LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKD 219

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                 +    +L   ME  G   +V++YS  +  +CK ++ + A  ++ EM  +     
Sbjct: 220 LLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMN 279

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYN +  GL     VE AF   +EM  +G++ D + Y   ++GLCK G + EA  L  
Sbjct: 280 EVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLD 339

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     + ++  Y+ L+DG  K G+   A+++ + +    +  + + Y+ +I  LC  G
Sbjct: 340 EMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIG 399

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++ +A  L  +M   G  PD   ++ LM G  ++ +     ELL+ M
Sbjct: 400 QLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 235/473 (49%), Gaps = 76/473 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++K  G  P+V T++  I   CRT     AL L   M++        C+ +AV
Sbjct: 129 QAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG------CQLNAV 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
            Y T++ G  +E +  +A EL   M    I PDV T+N ++   C   +  E++RL    
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKV 242

Query: 118 --------------FIE-------------MMD----QGVQPNVVTFSVIMDELCKNGKM 146
                         FI+             M+D    +G+ P+VVT++ ++  LCKN  +
Sbjct: 243 LKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNV 302

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            EA + L  ++  G+ P+ F YNTL+DG+C  G +  A+++       G   + F+Y  L
Sbjct: 303 VEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSL 362

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING C+N EI+ AL+L++  L KG+KPTV+ YN L  GL +   + +A ++ +EM  +G 
Sbjct: 363 INGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGC 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEALEL---------------FRTL-----RILKCEL--- 303
           ++D W Y   I+GLCK G + +A  L               F TL     + LK E    
Sbjct: 423 SSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQ 482

Query: 304 ------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
                       D+ +Y+ +++GL K+ + +   E F ++     + + +TYNI+  +LC
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLC 542

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             GK+++A DL  ++  KG+ PD V+F T++ G   N +     +L  RM E+
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 206/392 (52%), Gaps = 8/392 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+TY+TLI GLC+  + + A     +++NG  E      PD   Y T+IDG CK 
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE------PDGFTYNTLIDGYCKM 334

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +  A+++L     K   PD  TY S+I G C  ++ + A  LF   + +G++P V+ +
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++  LC+ G + +A Q++  M + G   + + YN +++G C  G V+ A  L     +
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +VF+++ LI+GYCK  ++E  + + ++M S G+ P V+TYN++  GL +  + E 
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             + F+ M   G   +   Y    + LCK G + EAL+L   +       D  S++ +I 
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVV-TYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           G   +G LK A++LF  +     ++    TYNIMI+A      +     LFL+M A G A
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 373 PDCVAFNTLMLG-CIRNNETSKVVELLHRMDE 403
           PD   +  ++ G CI  N  S    LL  +++
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 180/364 (49%), Gaps = 7/364 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  TY +LINGLC+      AL LF      N   G   KP  ++Y  +I GLC+E
Sbjct: 351 GFVPDEFTYCSLINGLCQNDEIDRALALF------NAALGKGLKPTVILYNMLIKGLCQE 404

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A +++ +M +   + D+ TYN VI G C     ++A  L  + + +G  P+V TF
Sbjct: 405 GLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTF 464

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK  KME   Q+L  M   GV P+   YN++++G     +     E F +M  
Sbjct: 465 NTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE 524

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N  +Y+IL    CK  ++  AL L  E+L+KGI P  V++ T+  G      ++ 
Sbjct: 525 KGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKG 584

Query: 254 AFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A++LF  M +++ V+  T  Y   I+   +   +    +LF  +    C  D  +Y  +I
Sbjct: 585 AYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMI 644

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG C +G     ++    +     I  + T+  +I+ LC   ++ +A D+   M   G+ 
Sbjct: 645 DGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIV 704

Query: 373 PDCV 376
           P+ V
Sbjct: 705 PEVV 708



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 200/407 (49%), Gaps = 12/407 (2%)

Query: 1   MEAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---INGNGEFGVVC 56
           ++A  +F K+K   G + +++TY  +I  L   G+ +   N+  E    I+ +   GV  
Sbjct: 21  LKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGV-- 78

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
                 Y   +    ++G V +A ++  +M   N  P V++YN+++     +    +A +
Sbjct: 79  ------YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHK 132

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F+ M + G+ P+V TF++ +   C+  +   A +LL  M+  G + NA  Y T++ GF 
Sbjct: 133 VFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFY 192

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
                  A ELF  M  +G   +V +++ L++  CK  E++ +  L +++L KG+   + 
Sbjct: 193 EENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF 252

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+N    GL     +  A  + D + R G+  D   Y T I GLCKN  +VEA +    L
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E D  +Y+ LIDG CK G L+ A ++         + D  TY  +I+ LC + ++
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+A  LF     KG+ P  + +N L+ G  +     + +++++ M E
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 42/305 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +  ++   GC  ++ TY+ +INGLC+ G    A NL  + I      G V  PD 
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK----GYV--PDV 461

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + T+IDG CK+  ++   ++L +M    + PDV+TYNSV+ G   A  + +    F  
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN +T++++ + LCK GK+ EA  L++ ++  G+ P+   + T++ GF   G 
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 181 VNRA------------------------------------KELFVSMESMGCKHNVFSYS 204
           +  A                                    ++LF+ M + GC  + ++Y 
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYR 641

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ++I+G+C     +       EM+ KG  P++ T+  +   L   H+V  A  +   M  +
Sbjct: 642 VMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHN 701

Query: 265 GVAAD 269
           G+  +
Sbjct: 702 GIVPE 706



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 7/232 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  K+ + G  P+VITY++++NGL +       +  FE M+         C P+ + Y  
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG------CVPNKITYNI 536

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ- 124
           + + LCK G V++A +L+ ++ +K I PD V++ ++I GF    D   A +LF  M +Q 
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V     T++++++   +   +    +L   M   G  P+ + Y  ++DGFC+TG  +  
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +  + M   G   ++ ++  +IN  C    +  A+ +   M+  GI P VV
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +K  G +PNV TY+  I   CRT     A +L+E M+      GV+   D V 
Sbjct: 223 ARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVT 276

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + ++ GLC++G   +A  L  +M      P+ VTY ++I     A    E   L  EM+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  ++VT++ +MD L K GK +E    L   +   + PN   Y  L+D  C    V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++ + ME      NV ++S +ING+ K   ++ A      M  +GI P VVTY TL 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    + A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  +Y+ LIDGL K+G +  A++    L    ++ D V YN+ I+ LC  GK  +A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M   G+ PD   +NT+++   R  ET+K ++LLH M
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY TLI+ L + G     L+L  EM++     GVV   D V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR----GVVM--DLV 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D L K+G  D+ K+ L      N++P+ VTY  +I   C A++ +EA+++ +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVVTFS +++   K G +++A++   +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+    V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I   C+ G    A +L H +    +  +++TYN ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M + G +P  +    ++  C ++     ++++   M
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 195/400 (48%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+  +   G   +V+T S L+ GLCR G    A  LF EM        V   P+ V
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK------VGAAPNHV 310

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L K G   +   LL +M  + +  D+VTY +++        ++E K      
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PN VT++V++D LCK   ++EA Q+L  M +  + PN   ++++++GF   G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E    M+  G   NV +Y  LI+G+ K +  + AL +Y +ML +G+K      ++L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  LF +    G++ D   Y T IDGL K G +  A +  + L     
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC  G+ K A      +    L  D  TYN MI + C  G+  KA  
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+   + P+ + +NTL+ G        K   LL+ M
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 76/418 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF      G   + + Y+TLI+GL + G    A    +E+++ N        PDAV
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN------MLPDAV 555

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC  G   +AK  L +M++  + PD  TYN++I   C   ++ +A +L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF--------------- 166
               ++PN++T++ ++  L   G +E+A  LL  M+  G  P++                
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 167 --------------------VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                               VYNTL+   C  G   +A  +   M   G   +  +++ L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK+  ++ A + Y++ML + I P + T+NTL  GL  + ++  A  +  EM++ G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y     G  K    VEA+ L+       CE+  + +                  
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGF------------------ 830

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                     +  V TYN +I      G M +A +LF DM+ +GV P    ++ L+ G
Sbjct: 831 ----------VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 193/424 (45%), Gaps = 29/424 (6%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------ING---NGE 51
           +K  G  PNV+TY TLI+G  +      AL ++ +M               +NG   NG+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 52  F-----------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS 100
                       G     D V YTT+IDGL K G +  A +   ++ D+N+ PD V YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
            I   C      EAK    EM + G++P+  T++ ++   C+ G+  +A +LL  M    
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++PN   YNTL+ G   TG V +AK L   M S G   +  ++  ++    +++ ++  L
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++  M++ G+   +  YNTL   L       +A  + +EM   G+A DT  +   I G 
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK+ ++  A   +  +       +I +++ L+ GL   GR+  A  +   + +  L  + 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           +TY+I+           +A  L+ +M  KG  P    +N L+    +    ++  EL   
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 401 MDER 404
           M +R
Sbjct: 860 MQKR 863



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 37/350 (10%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           ++  P  V YN ++      +D   A  +  EM  +GV  + VT + ++  LC+NG+++ 
Sbjct: 97  RSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 149 ASQLLEL------------------MIQIGVRPNAFV----------------YNTLMDG 174
           A+ L +                     ++G  P A                  YNTL+ G
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           FC  G+V+ A+ +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+   
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVT + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E L L  
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +      +D+ +Y+ L+D L K G+     +         L  + VTY ++I ALC   
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +D+A  + L+ME K ++P+ V F++++ G ++     K  E    M ER
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 29/282 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           +A  L  ++K    +PN+ITY+TL+ GL  TG    A  L  EM++       +      
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 58  -------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                     D  +Y T++  LC  G   KA  +L +M    I 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +T+N++I G C ++  + A   + +M+ Q + PN+ TF+ ++  L   G++ EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ LI+ + K
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
              +  A  L+ +M  +G+ PT  TY+ L  G +++ + +++
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 99/189 (52%), Gaps = 6/189 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   G  P+ IT++ LI G C++ H   A   + +M++ N        P+  
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN------ISPNIA 765

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++ GL   G + +A  +L++M+   + P+ +TY+ +  G    ++  EA RL+ EM
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V T++ ++ +  K G M +A +L + M + GV P +  Y+ L+ G+    R 
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLARE 885

Query: 182 NRAKELFVS 190
            +++  + +
Sbjct: 886 QKSQNTYFT 894


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 204/406 (50%), Gaps = 10/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+  F   P+  TY++LI G CR      A  +F+ M+         C P++V
Sbjct: 215 EAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG------CNPNSV 268

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC EG + +A ++L +M +K I P V TY   I   C     ++A  L   M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V T++ I+  L + GKME A  +   M++ G+ PN   YN L++  C  GR 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++F  ME  G   N  +Y+ +I G     +IE A+ ++++ML  G  PTVVTYNTL
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +   +   +  A +    M+      D   Y   I G CK G +  A   F    +LKC
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFF--YEMLKC 506

Query: 302 ELDIR--SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +     +Y+ +IDG CK G++ +A  LF  +      A + TYN +I  L    +  +A
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
                 M  +G+ P+ + + +L+ G  +N  T+   ++ H M+++N
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  ++ ++ + G +P+++T++T+IN LC+ G    A+ +F ++   +     +C PDA 
Sbjct: 180 SAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD-----LC-PDAF 233

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G C+   +DKA E+  +M     NP+ VTY+++I G C      EA  +  EM
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM 293

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P V T++V +  LC  G++++A  L+  M + G  P+   Y  ++ G    G++
Sbjct: 294 TEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM 353

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  ++  M   G   N  +Y+ LIN  C       AL ++  M   G      TYN +
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF +  +E+A  +F++M + G +     Y T I    K GY+  A      ++   C
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D R+Y  LI G CK G+L  A   F+ + +  +  +  TY  MI   C +GK+D A  
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  ME  G +     +N ++ G  + N  S+  +   +M E+
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 206/400 (51%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +   GC P+V TY+ +I+GL R G   +A+ ++ +M+      G+V  P+ V
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE----GLV--PNTV 373

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ LC EG    A ++   M+      +  TYN +I+G    +D  +A  +F +M
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P VVT++ ++ E  K G +  A++ L +M +    P+   Y  L+ GFC  G++
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F  M   G   N ++Y+ +I+GYCK  +I+ ALSL+  M   G   ++ TYN +
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + ++   A K   +M   G+  +T  Y + I+GLCKN     A ++F  +    C
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNC 613

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI GLC+ G++  A      L        + TY+ ++  LC +G+ ++A  
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQ 669

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+ KG++P    + +L++   ++ +    +E+ + M
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 20/385 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ K+   G  PN +TY+ LIN LC  G   +AL +F+ M  G+G        +A  
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWM-EGHGTLA-----NAQT 409

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI-----RGFCYANDSNEAKRL 117
           Y  II GL     ++KA  +  +M     +P VVTYN++I     RG+      N A R 
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYL-----NNATRF 464

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M +   +P+  T+  ++   CK GK++ A+     M++ G+ PN + Y  ++DG+C 
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+++ A  LF  ME  GC  ++ +Y+ +I+G  K      A    ++M  +G++P  +T
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTIT 584

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y +L  GL +      AFK+F EM++     +   Y + I GLC+ G +  A  L     
Sbjct: 585 YTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN-- 642

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              CE  I +YS L+ GLC+ GR   A +L  ++    L   +  Y  ++ A C   K+D
Sbjct: 643 --GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVD 700

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A ++F  M  KG  P    +  L+
Sbjct: 701 CALEIFNLMAVKGFQPHLFIYKVLI 725



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 176/353 (49%), Gaps = 10/353 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K   CEP+  TY  LI+G C+ G    A + F EM+    + G+   P+   
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEML----KCGI--SPNQWT 514

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG CKEG +D A  L  +M++   +  + TYN++I G    N  +EA++   +M 
Sbjct: 515 YTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMT 574

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+QPN +T++ +++ LCKN     A ++   M +    PNA  Y +L+ G C  G+V+
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ L       GC+  + +YS L++G C+      A  L   M  KG+ P++  Y +L 
Sbjct: 635 AAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           +   +  +V+ A ++F+ M   G     + Y+  I  LC      EAL +F++L   +  
Sbjct: 691 VAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWN 750

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
            D+  ++ L+DGL + G   +  +  + +        + TY I+   L   GK
Sbjct: 751 SDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 10/373 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+   G  P V+TY+TLI    + G+   A      M   N      C+PD  
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN------CEPDER 478

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK G +D A     +M    I+P+  TY ++I G+C     + A  LF  M
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   ++ T++ I+  L K  +  EA +    M + G++PN   Y +L++G C     
Sbjct: 539 EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++F  ME   C  N  +Y+ LI G C+  +++ A      +   G +PT+ TY+TL
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTL 654

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L + M+  G++     Y + +   CK+  +  ALE+F  + +   
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGF 714

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  +  Y  LI  LC   R + A  +F SL +    +D++ + +++  L  +G  D    
Sbjct: 715 QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMK 774

Query: 362 LFLDMEAKGVAPD 374
               ME++   P 
Sbjct: 775 FLYLMESRNCTPS 787



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 174/376 (46%), Gaps = 35/376 (9%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T++  L K   V  A+ +  Q+    + P ++T+N++I   C      EA  +F ++ 
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + P+  T++ ++   C+N K+++A ++ + M++ G  PN+  Y+TL++G C  GR+ 
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G +  V++Y++ I+  C    ++ A++L   M  KG  P+V TY  + 
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GLF   ++E A  ++ +M + G+  +T  Y   I+ LC  G    AL++F  +      
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI----------------- 345
            + ++Y+ +I GL     ++ A  +F+ + +      VVTYN                  
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464

Query: 346 ------------------MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
                             +I   C  GK+D A   F +M   G++P+   +  ++ G  +
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 388 NNETSKVVELLHRMDE 403
             +    + L  RM+E
Sbjct: 525 EGKIDVALSLFERMEE 540



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 143/270 (52%)

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           +F+ ++ +L K   +  A  +   +   GV+P+   +NT+++  C  G+V  A  +F  +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
                  + F+Y+ LI G+C+N++++ A  ++  M+  G  P  VTY+TL  GL    ++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A  + +EM   G+    + Y   I  LC  G + +A+ L R++    C   +++Y+ +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I GL ++G++++A  ++H + +  L+ + VTYN +I+ LC +G+   A  +F  ME  G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +   +N ++ G    ++  K + + ++M
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 149/325 (45%), Gaps = 33/325 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
            A + F ++   G  PN  TY+ +I+G C+ G   VAL+LFE M                
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554

Query: 46  ---INGN--GEFGVVC--------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                GN   E    C        +P+ + YT++I+GLCK    + A ++  +M+ KN  
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TY S+I G C     + A+RL     + G +P + T+S ++  LC+ G+  EASQL
Sbjct: 615 PNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQL 670

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M + G+ P+  +Y +L+   C + +V+ A E+F  M   G + ++F Y +LI   C 
Sbjct: 671 VENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCG 730

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               E AL+++  +L K     ++ +  L  GL +    +   K    M+          
Sbjct: 731 VSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHT 790

Query: 273 YRTFIDGLCKNGYIVEALELFRTLR 297
           Y      L K G  +   ++   LR
Sbjct: 791 YIILARELSKVGKSIGTDQIGNRLR 815



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 108/202 (53%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           ++S++ L+    K   +  A ++Y+++ S G+KP+++T+NT+   L +  +V+ A  +F+
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           ++ +  +  D + Y + I G C+N  + +A E+F  +    C  +  +YS LI+GLC  G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R+  A ++   +    +   V TY + I +LC  G++D A +L   M  KG +P    + 
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            ++ G  R  +    + + H+M
Sbjct: 342 AIISGLFRAGKMELAIGMYHKM 363



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 259 DEMQR-----HGVAADT--------WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           DE++R     HG+++          +++ T +  L K   +  A  ++  +     +  +
Sbjct: 138 DELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSL 197

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ +I+ LCK G+++ A  +F+ + +  L  D  TY  +I   C + K+DKA ++F  
Sbjct: 198 LTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDR 257

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M   G  P+ V ++TL+ G        + +++L  M E+
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEK 296


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 214/406 (52%), Gaps = 12/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +K+ G  PN  TY+ L+ G C+ G    A N+ E M   N        PD  
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVW 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLC EG +++A +L  +M++  + PDVV+YN++I G    +  +EA +L  EM
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PN VT ++++   CK GKM++AS  +  M + G  P+   YNTL++G+C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 182 NRAKELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             A   F +M+ MG K+   +  + + ++   C+ K++E A  L S    +G     V+Y
Sbjct: 435 GEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL +G F+   V+RA KL+DEM+   +   T  Y   I GLC+ G   +A+     L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  +Y+ ++ G C+ G ++ A++  + +       DV T NI++  LC +G ++K
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF    +KG A D V +NTL+    +         LL  M+E+
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 202/391 (51%), Gaps = 6/391 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G  PNV T++ +I G C       A+    E +N  G++   C PD V Y TI+D LCK
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAV----EFLNVMGKYN--CSPDNVTYNTILDALCK 255

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G +  A++LL+ MK + + P+  TYN ++ G+C      EA  +   M    + P+V T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++ LC  G++EEA +L + M  + + P+   YNTL++G     +++ A +L   M 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G K N  +++I++  YCK  +++ A +  ++M   G  P  VTYNTL  G  +   + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+  DEM R  +  D+    T +  LC+   + EA +L  + R     +D  SY  LI
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G  K G +  A +L+  +    +I   VTYN +I  LC  GK ++A     ++   G+ 
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD   +NT++ G  R  +  K  +  ++M E
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVE 586



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++     P+V++Y+TLING         A  L EEM     E GV  KP+AV
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM----SEKGV--KPNAV 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++   CKEG +D A   + +M++   +PD VTYN++I G+C A +  EA R   EM
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++ + VT + I+  LC+  K+EEA +LL    + G   +   Y TL+ G+   G V
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA +L+  M+      +  +Y+ +I G C+  + E A+S  +E+L  G+ P   TYNT+
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      VE+AF+  ++M  +    D +     + GLC  G + +AL+LF T      
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +Y+ LI  LCK GRL  A+ L   +    L  D  TYN +I AL   G++ +A +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 362 LFLDMEAKGVAPDCV 376
               M  KG  P  V
Sbjct: 685 FMSKMLEKGXLPXQV 699



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 176/388 (45%), Gaps = 38/388 (9%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE- 113
           +  P   +  T I    + G    A ++  +MK   + P+++T N+++        S+  
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 114 --AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             ++  F + +  G+ PNV TF++++   C   K ++A + L +M +    P+   YNT+
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK------------------- 212
           +D  C  GR+  A++L + M+S G   N  +Y+IL+ GYCK                   
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 213 ----------------NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                              IE A  L  EM +  + P VV+YNTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L +EM   GV  +   +   +   CK G + +A      +       D  +Y+ LI+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G +  A+     + R  +  D VT N ++  LC + K+++A+ L      +G   D V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++ TL++G  ++    + ++L   M E+
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEK 517



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 3/317 (0%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS- 150
           +P     ++ I  +  +   + A ++F +M    ++PN++T + +++ L +       S 
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 151 --QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
             +     I++G+ PN   +N ++ G+CL  +   A E    M    C  +  +Y+ +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
             CK   +  A  L  +M S+G+ P   TYN L  G  ++  ++ A  + + M ++ +  
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D W Y   I+GLC  G I EA +L   +  LK   D+ SY+ LI+G  +  ++  A++L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +    +  + VT+NIM+   C +GKMD A +    ME  G +PDCV +NTL+ G  + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 389 NETSKVVELLHRMDERN 405
               +    +  M  +N
Sbjct: 432 GNMGEAFRTMDEMGRKN 448



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 52/368 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A+   TK++  G  P+ +TY+TLING C+ G+   A    +EM   N +   V      
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 56  ---CKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              C+                     D V Y T+I G  K+G VD+A +L  +MK+K I 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTYN +I G C    + +A     E+++ G+ P+  T++ I+   C+ G +E+A Q 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+ F  N L+ G C+ G + +A +LF +  S G   +  +Y+ LI   CK
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG------- 265
              ++ A +L SEM  K + P   TYN +   L +  ++  A +   +M   G       
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700

Query: 266 ----------------VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
                             + + AY  +I  LC  G   +A+ +F   +     +D  +Y 
Sbjct: 701 QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 310 CLIDGLCK 317
            L+DGL K
Sbjct: 761 NLMDGLIK 768


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +K  G +PNV TY+  I   CRT     A +L+E M+      GV+   D V 
Sbjct: 223 ARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVT 276

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + ++ GLC++G   +A  L  +M      P+ VTY ++I     A    E   L  EM+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  ++VT++ +MD L K GK +E    L   +   + PN   Y  L+D  C    V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++ + ME      NV ++S +ING+ K   ++ A      M  +GI P VVTY TL 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    + A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  +Y+ LIDGL K+G +  A++    L    ++ D V YN+ I+ LC  GK  +A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M   G+ PD   +NT+++   R  ET+K ++LLH M
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY TLI+ L + G     L+L  EM++     GVV   D V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D L K+G  D+ K+ L      N++P+ VTY  +I   C A++ +EA+++ +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVVTFS +++   K G +++A++   +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+    V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I   C+ G    A +L H +    +  +++TYN ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M + G +P  +    ++  C ++     ++++   M
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 195/400 (48%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+  +   G   +V+T S L+ GLCR G    A  LF EM        V   P+ V
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK------VGAAPNHV 310

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L K G   +   LL +M  + +  D+VTY +++        ++E K      
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PN VT++V++D LCK   ++EA Q+L  M +  + PN   ++++++GF   G +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E    M+  G   NV +Y  LI+G+ K +  + AL +Y +ML +G+K      ++L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  LF +    G++ D   Y T IDGL K G +  A +  + L     
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC  G+ K A      +    L  D  TYN MI + C  G+  KA  
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+   + P+ + +NTL+ G        K   LL+ M
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 192/438 (43%), Gaps = 76/438 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF      G   + + Y+TLI+GL + G    A    +E+++ N        PDAV
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN------MLPDAV 555

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC  G   +AK  L +M++  + PD  TYN++I   C   ++ +A +L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF--------------- 166
               ++PN++T++ ++  L   G +E+A  LL  M+  G  P++                
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 167 --------------------VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                               VYNTL+   C  G   +A  +   M   G   +  +++ L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK+  ++ A + Y++ML + I P + T+NTL  GL  + ++  A  +  EM++ G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y     G  K    VEA+ L+       CE+  + +                  
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGF------------------ 830

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                     +  V TYN +I      G M +A +LF DM+ +GV P    ++ L+ G  
Sbjct: 831 ----------VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 387 RNNETSKVVELLHRMDER 404
           R    ++V + L  M E+
Sbjct: 881 RIRNGTEVKKCLKDMKEK 898



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 37/350 (10%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           ++  P  V YN ++      +D   A  +  EM  +GV  + VT + ++  LC+NG+++ 
Sbjct: 97  RSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 149 ASQLLEL------------------MIQIGVRPNAFV----------------YNTLMDG 174
           A+ L +                     ++G  P A                  YNTL+ G
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           FC  G+V+ A+ +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+   
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVT + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E L L  
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +      +D+ +Y+ L+D L K G+     +         L  + VTY ++I ALC   
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +D+A  + L+ME K ++P+ V F++++ G ++     K  E    M ER
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 29/324 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           +A  L  ++K    +PN+ITY+TL+ GL  TG    A  L  EM++       +      
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 58  -------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                     D  +Y T++  LC  G   KA  +L +M    I 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +T+N++I G C ++  + A   + +M+ Q + PN+ TF+ ++  L   G++ EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ LI+ + K
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+  G +     
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 273 YRTFIDGLCKNGYIVEALELFRTL 296
                    K G   +A  L + L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G EPN +TY  L  G  +  + + A+ L+ EM+ G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    K G + +AKEL   M+ + ++P   TY+ ++ G+    +  E K+   +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            ++G  P+  T S I     K G   +A +LL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P V TY+ LI+   + G    A  LF++M     + GV   P +
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM----QKRGV--HPTS 869

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  ++ G  +     + K+ L  MK+K  +P   T + + R F     + +A+RL 
Sbjct: 870 CTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 205/402 (50%), Gaps = 10/402 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   + A   +PNV++Y+ L+ GLC+      A  L  +MI+  G       PD V Y+T
Sbjct: 32  LLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRS----TPDMVTYST 87

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G CK G V++++ELL ++  + + PD + Y  V+   C +    EA  L  EM+  G
Sbjct: 88  LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAG 147

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P ++TF+ ++   C+   +E A  LL+ M   GV+ +   YNTLMDG C  GR+  A+
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   M++ GC  +V +YS  + G CK+ ++  A  +  +M      P VVTYNT+  GL
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267

Query: 246 FEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            +  +++ A ++ ++M    G   +   Y T +DGLCK G   EA  +   +    C  D
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS L++GLCK+G+++ A E    +       + VTY  ++H LC+ G++ +A  +  
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 365 DM-----EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M           P    +N L+ G  +       ++   RM
Sbjct: 388 EMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 201/349 (57%), Gaps = 3/349 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C P++V +  +++G  K+G     + LL  M  ++I P+VV+YN ++ G C     +EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 116 RLFIEMMDQGVQ--PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
            L  +M+ +G +  P++VT+S ++   CK GK+EE+ +LL+ +I  G+RP+A +Y  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C + R+  A EL   M   GC   + +++ LI+G C+ K +E A SL  +M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVTYNTL  GL +  +++ A +L + M+  G A D  AY +F+ GLCK+G +++A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCA 352
             +R    + ++ +Y+ ++DGLCKSG++  A E+   +        +VV Y+ ++  LC 
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G+  +A  +   M   G  PD V +++L+ G  +  +  + VE +  M
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 179/313 (57%), Gaps = 12/313 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P +IT++TLI+G CR  +  +A +L ++M       GV  K D V Y T++DGLCK 
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKM----AASGV--KADVVTYNTLMDGLCKA 200

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A++LL +MK     PDVV Y+S + G C +    +A ++  +M D    PNVVT+
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTY 260

Query: 134 SVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           + I+D LCK+GK++ A +++E M    G   N   Y+T++DG C  GR   A+ +  +M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC+ +V +YS L+NG CK  +IE A+    EM  +G KP  VTY +L  GL    ++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 253 RAFKLFDEMQRHG-----VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
            A ++ +EM   G            Y   I GLCK G I +AL+ F+ +R   C+ D  S
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 308 YSCLIDGLCKSGR 320
           YS +++GL +SGR
Sbjct: 441 YSTIVEGLARSGR 453



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 186/365 (50%), Gaps = 12/365 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  L  ++ + G  P+ + Y+ ++  LC++     AL L EEMI         C P  +
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAG------CCPTLI 153

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G C+E  ++ A  LL +M    +  DVVTYN+++ G C A    EA++L   M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV +S  +  LCK+GK+ +A Q+LE M      PN   YNT++DG C +G++
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273

Query: 182 NRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A E+   M S  GC  NV  YS +++G CK    + A S+   M   G +P VVTY++
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL---- 296
           L  GL +  ++E A +   EM   G   +   Y + + GLC  G + EA  +   +    
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393

Query: 297 -RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                C   + +Y+ LI GLCK+GR+  A + F  +       D V+Y+ ++  L   G+
Sbjct: 394 GGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453

Query: 356 MDKAH 360
             +A 
Sbjct: 454 ALQAE 458



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 166/305 (54%), Gaps = 20/305 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  K+ A G + +V+TY+TL++GLC+ G    A  L E M          C PD V 
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG------CAPDVVA 224

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y++ + GLCK G V  A ++L QM+D + +P+VVTYN+++ G C +   + A    +EMM
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEMM 280

Query: 123 DQ-----GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +Q     G   NVV +S ++D LCK G+ +EA  ++E M + G RP+   Y++L++G C 
Sbjct: 281 EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-----K 232
            G++  A E    M   GCK N  +Y  L++G C    +  A  +  EM S G       
Sbjct: 341 AGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCP 400

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P+V TYN L  GL +  +++ A K F  M+  G   D  +Y T ++GL ++G  ++A  +
Sbjct: 401 PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMI 460

Query: 293 FRTLR 297
              +R
Sbjct: 461 LSEVR 465



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 42/321 (13%)

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MD+ G  PN VTF+ +++   K G+  +  +LLE M    ++PN   YN L++G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 181 VNRAKELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK------ 232
            + A+EL   M S G +   ++ +YS L++GYCK  ++E +  L  E++S+G++      
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 233 -----------------------------PTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
                                        PT++T+NTL  G      +E A  L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            GV AD   Y T +DGLCK G + EA +L   ++   C  D+ +YS  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLM 382
           A ++   +       +VVTYN ++  LC  GK+D A ++   M  + G   + V ++T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 383 LGCI---RNNETSKVVELLHR 400
            G     R  E   V+E + R
Sbjct: 301 DGLCKLGRTQEARSVMEAMAR 321



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 127/231 (54%), Gaps = 10/231 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +  +++    +PNV+TY+T+++GLC++G    AL + E+M + +G     C  + 
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG-----CGLNV 293

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++DGLCK G   +A+ ++  M      PDVVTY+S++ G C A    EA     E
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR-----PNAFVYNTLMDGF 175
           M  +G +PN VT+  ++  LC  G++ EA +++E M   G       P+   YN L+ G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           C  GR++ A + F  M S GC  +  SYS ++ G  ++     A  + SE+
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 131/248 (52%), Gaps = 2/248 (0%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M + G  PN+  +N L++GF   GR    + L  +M +   + NV SY+ L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 216 IEGALSLYSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              A  L  +M+S+G +  P +VTY+TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              +  LCK+  + EALEL   +    C   + +++ LI G C+   L++A  L   +  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             + ADVVTYN ++  LC  G++ +A  L   M+A G APD VA+++ + G  ++ +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 394 VVELLHRM 401
             ++L +M
Sbjct: 241 AHQVLEQM 248



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +++ L++G  K GR      L  ++    +  +VV+YN ++  LC   +  +A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 361 DLFLDMEAKG--VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +L  DM ++G    PD V ++TL+ G  +  +  +  ELL  +  R 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG 112


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 211/430 (49%), Gaps = 39/430 (9%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F K    G  PN+I +S+LINGLC+ G    A  + EEM+          KP+   +T +
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW------KPNVYTHTAL 339

Query: 67  IDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IDGLCK+G+ +KA  L L++ +  N  P+V TY  +I G+C     N A+ L I M +QG
Sbjct: 340 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG 399

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++D  CK G    A +L++LM + G  PN F YN ++DG C  GR   A 
Sbjct: 400 LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY 459

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L       G   +  +Y+ILI+ +C+  + + AL+++S M   G++P + TYN L    
Sbjct: 460 KLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATF 519

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               +VE + KLF+E    G+      Y + I G C++G+I  A++ F  +R   C+ D 
Sbjct: 520 CRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL-------------------------PRGVLIAD- 339
            +Y  LI GLC   +L  A +L+ ++                            ++I + 
Sbjct: 580 ITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILER 639

Query: 340 ------VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                 + T N +I  LC++ K+  A   F  +  K +  D +        C  +N+ + 
Sbjct: 640 LEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFAL 699

Query: 394 VVELLHRMDE 403
           V +L  R+ +
Sbjct: 700 VSDLSERISK 709



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 7/386 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  +Y  ++ G CR G         ++MI    E G     D    T +I    ++GFV
Sbjct: 226 PDSTSYKLMVVGYCRMGRISDVDRWLKDMI----ERGYAV--DNATCTLMISTFSEKGFV 279

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A     +     +NP+++ ++S+I G C      +A  +  EM+ +G +PNV T + +
Sbjct: 280 NRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTAL 339

Query: 137 MDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +D LCK G  E+A +L L+L+     +PN + Y  +++G+C   ++NRA+ L + M+  G
Sbjct: 340 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG 399

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+G+CK      A  L   M  +G  P + TYN +  GL +  +   A+
Sbjct: 400 LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY 459

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           KL     + G+ AD   Y   I   C+     +AL +F  +  +  + D+ +Y+ LI   
Sbjct: 460 KLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATF 519

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+  +++ + +LF       L+    TY  MI   C DG +  A   F  M   G  PD 
Sbjct: 520 CRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + +  L+ G    ++  +  +L   M
Sbjct: 580 ITYGALISGLCNESKLDEACQLYETM 605



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 172/348 (49%), Gaps = 1/348 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+ + ++++I+GLCK G + +A E+L +M  K   P+V T+ ++I G C    + +A RL
Sbjct: 296 PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL 355

Query: 118 FIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           F++++     +PNV T++ +++  CK  K+  A  LL  M + G+ PN   Y  L+DG C
Sbjct: 356 FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHC 415

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G   RA EL   M   G   N+F+Y+ +I+G CK      A  L    L  G+    V
Sbjct: 416 KAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKV 475

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L          ++A  +F  M + G+  D   Y   I   C+   + E+ +LF   
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             L       +Y+ +I G C+ G +  A + FH +       D +TY  +I  LC + K+
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A  L+  M   G++P  V   TL     +  +++  + +L R++++
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 182/388 (46%), Gaps = 24/388 (6%)

Query: 17  PNVITYS---TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           PN +T+    T++  L +   ++V+L+ F  +I G  +F    +   V  TT ++     
Sbjct: 97  PNSLTHEQVITVVASLAQEAGSVVSLSFFNWVI-GFSKFRHFMRLYIVCATTFLNN---- 151

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D+A E++  M               +R F       EA  + IEM + G+       
Sbjct: 152 DNLDRATEVMQCM---------------VRSFSEIGKLKEAVNMVIEMQNHGLVLKARIL 196

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D     G ++ A ++ + M+   V P++  Y  ++ G+C  GR++        M  
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  + +++I+ + +   +  A   + + +  G+ P ++ +++L  GL +I  +++
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQ 316

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLI 312
           AF++ +EM R G   + + +   IDGLCK G+  +A  LF + +R    + ++ +Y+C+I
Sbjct: 317 AFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMI 376

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +G CK  +L  A  L   +    L+ +  TY  +I   C  G   +A++L   M  +G  
Sbjct: 377 NGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFT 436

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHR 400
           P+   +N ++ G  +     +  +LL R
Sbjct: 437 PNIFTYNAIIDGLCKKGRFPEAYKLLRR 464



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F K++ +GC+P+ ITY  LI+GLC       A  L+E MI+ NG       P  V
Sbjct: 562 SAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMID-NG-----LSPCEV 615

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T+    CK+G    A  +L +++ K     + T N++IR  C       A   F ++
Sbjct: 616 TRVTLAYEYCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKVGVAALFFHKL 672

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           +D+ +  + +T +       ++ K    S L E
Sbjct: 673 LDKDLNVDRITLAAFTTACYESNKFALVSDLSE 705



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 42/95 (44%)

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           C++    + G+LK A  +   +    L+      N +I    A G +D A  +F +M  +
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V PD  ++  +++G  R    S V   L  M ER
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIER 257


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 208/413 (50%), Gaps = 29/413 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM--------------- 45
           +EA ALF ++KA GC P+V+TY++LI+G  + G       L  EM               
Sbjct: 217 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNAL 276

Query: 46  INGNGEFGVVCKP--------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           IN   +FG + K               + V ++T +D  CKEG V +A +L  QM+ + +
Sbjct: 277 INCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGM 336

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P+  TY S++ G C A   ++A  L  EM+ QG+ PNVVT++V++D LCK GK+ EA  
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADN 396

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +L LM + GV+ N  +Y TL+ G  +     RA +L   M++ G + +V  Y  LI G C
Sbjct: 397 VLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLC 456

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+++++ A SL  +M   G++P  V Y T+   LF+  +   A  L  ++   G   +  
Sbjct: 457 KDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVV 516

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   IDGLCK G I EA+  F  +R L  + ++++Y+ LIDG CK G L  A  L + +
Sbjct: 517 TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM 576

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               +  D V Y  +I        +  A  L   M   G+  D   +   + G
Sbjct: 577 IDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISG 629



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 199/388 (51%), Gaps = 6/388 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV T++ +I+ LC+ G  + A  LF  M        + C PD V Y ++IDG  K G +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMK------AMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++ ++L+ +M+      DVVTYN++I  F       +A   F EM  QGV  NVVTFS  
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK G ++EA +L   M   G+ PN F Y +L+DG C  GR++ A  L   M   G 
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV +Y+++++G CK  ++  A ++ S M   G+K   + Y TL  G F  +  ERA  
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L ++M+  G+  D   Y T I GLCK+  + EA  L   +       +   Y+ ++D L 
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G+   A  L H +       +VVTY  +I  LC  G + +A   F  M   G+ P+  
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           A+  L+ G  +    +K + L++ M ++
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDK 579



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G  PN  TY++L++G C+ G    A+ L +EM++     G+V  P+ V
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVV 376

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLCKEG V +A  +L  M+   +  + + Y ++I G    N+S  A  L  +M
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +V  +  ++  LCK+ K++EA  LL  M   G+RPN  +Y T+MD     G+ 
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   +   G + NV +Y  LI+G CK   I  A+S +++M   G+ P V  Y  L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I  + +A  L +EM   G++ D   Y + IDG  K   + +A  L   +     
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+  Y+C I G C    ++ A  +   +    +  D   YN +I      G M++A  
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASS 676

Query: 362 LFLDMEA 368
           L  +ME+
Sbjct: 677 LQNEMES 683



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 196/402 (48%), Gaps = 10/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++     PN  T + ++  L R     +   LF+          ++  P+  
Sbjct: 152 DAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD----------LLPVPNVF 201

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ L ++MK    +PDVVTYNS+I G+    D  E ++L  EM
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +VVT++ +++   K G+ME+A      M + GV  N   ++T +D FC  G V
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   G   N F+Y+ L++G CK   ++ A+ L  EM+ +G+ P VVTY  +
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V  A  +   M+R GV A+   Y T I G   N     AL+L   ++    
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ELD+  Y  LI GLCK  ++  A  L H +    L  + V Y  ++ AL   GK  +A  
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   +   G  P+ V +  L+ G  +    S+ +   ++M E
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 162/293 (55%), Gaps = 4/293 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A R    +    V PN  T + I+  L +N +     +L +L+      PN F +N +
Sbjct: 151 DDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIV 206

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  G +  A+ LFV M++MGC  +V +Y+ LI+GY K  ++E    L SEM   G 
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGC 266

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              VVTYN L     +  ++E+A+  F EM+R GV A+   + TF+D  CK G + EA++
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMK 326

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R+     +  +Y+ L+DG CK+GRL  A  L   +    L+ +VVTY +M+  LC
Sbjct: 327 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 386

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +GK+ +A ++   ME  GV  + + + TL+ G   NN + + ++LL++M  +
Sbjct: 387 KEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNK 439



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 182/382 (47%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A + F ++K  G   NV+T+ST ++  C+ G    A+ LF +M + G         P+ 
Sbjct: 288 KAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG-------MMPNE 340

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT+++DG CK G +D A  LL +M  + + P+VVTY  ++ G C      EA  +   
Sbjct: 341 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSL 400

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV+ N + ++ ++     N   E A  LL  M   G+  +  +Y TL+ G C   +
Sbjct: 401 MERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQK 460

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ AK L   M   G + N   Y+ +++   K  +   A++L  ++L  G +P VVTY  
Sbjct: 461 VDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCA 520

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +   +  A   F++M+  G+  +  AY   IDG CK G + +A+ L   +    
Sbjct: 521 LIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKG 580

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             LD   Y+ LIDG  K   L+ A+ L   +    L  D+  Y   I   C    M +A 
Sbjct: 581 MSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEAR 640

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            +  +M   G+ PD   +N L+
Sbjct: 641 GVLSEMIGTGITPDKTVYNCLI 662



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 6/193 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+   G +PNV+TY  LI+GLC+ G    A++ F +M     E G+   P+  
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM----RELGL--DPNVQ 551

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDG CK G ++KA  L+ +M DK ++ D V Y S+I G+    +  +A  L  +M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  ++  +   C    M+EA  +L  MI  G+ P+  VYN L+  +   G +
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 182 NRAKELFVSMESM 194
             A  L   MES+
Sbjct: 672 EEASSLQNEMESV 684


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 202/389 (51%), Gaps = 6/389 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+T++ +++   R G    A+ L + M++         KP  V Y +++ GL + G  
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG------IKPGLVTYNSVLKGLLRNGRW 245

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DKA+E+   M    + PDV ++N +I GFC A +  EA R + EM  + V P+VV+FS +
Sbjct: 246 DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCL 305

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    + G+M+ A++ L  M + G+ P+  +Y  ++ GFC  G +  A  +   M + GC
Sbjct: 306 IGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGC 365

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK + +  A  L +EM  +G+ P + T+ TL  G      +E+A +
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            FD +    +  D   Y T IDG+C+ G + +A EL+  +   +   +  +YS LID  C
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G++  A+     +    ++ +++TYN +I   C  G + K       M    V PD +
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLI 545

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +NTL+ G ++  +  +   LL  M+  N
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENEN 574



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  + A G  P+V +++ LI G CR G    AL  ++EM       G    PD V
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM------RGRRVTPDVV 300

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I    + G +D A E L +M++  + PD V Y  VI GFC A    EA R+  EM
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++ +++ LCK  ++ +A +LL  M + GV P+   + TL+ G+C  G +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A + F ++     + ++ +Y+ LI+G C+  ++  A  L+ +M S+ I P  VTY+ L
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  QV+ AF   DEM   G+  +   Y + I G C++G + +  +    +R  K 
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI G  K G++  A+ L   +    +  D VTYN++I      G M +A  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++  M A+G+ PD   + +++ G +    + K  +L   M
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEM 640



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 200/382 (52%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL   + + G +P ++TY++++ GL R G    A  +F  M       GV   PD   
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM----DACGVA--PDVRS 266

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I G C+ G +++A     +M+ + + PDVV+++ +I  F    + + A     EM 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ P+ V +++++   C+ G M EA ++ + M+  G  P+   YNTL++G C   R++
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+EL   M+  G   ++ +++ LI+GYC++  IE AL  +  +  + ++P +VTYNTL 
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G+     + +A +L+D+M    +  +   Y   ID  C+ G +  A      +      
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +I +Y+ +I G C+SG +    +    +    ++ D++TYN +IH    +GKM +A +L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
              ME + V PD V +N ++ G
Sbjct: 567 LKIMENENVQPDAVTYNMIISG 588



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 192/373 (51%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +++     P+V+++S LI    R G    A     EM     EFG++  PD V
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM----REFGLM--PDGV 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C+ G + +A  +  +M      PDVVTYN+++ G C     ++A+ L  EM
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV P++ TF+ ++   C++G +E+A Q  + +    +RP+   YNTL+DG C  G +
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL+  M S     N  +YSILI+ +C+  +++ A +   EM++KGI P ++TYN++
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V +  +   +M+   V  D   Y T I G  K G + EA  L + +     
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV 575

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I G    G ++ A  ++  +    +  D  TY  MI+     G   K+  
Sbjct: 576 QPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQ 635

Query: 362 LFLDMEAKGVAPD 374
           L  +M  KG+APD
Sbjct: 636 LHDEMLQKGLAPD 648



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 170/293 (58%), Gaps = 8/293 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++ AFGC P+V+TY+TL+NGLC+       L+  EE++N   E GV   PD 
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR----LSDAEELLNEMKERGV--PPDL 404

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +TT+I G C++G ++KA +    + D+ + PD+VTYN++I G C   D  +A  L+ +
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + PN VT+S+++D  C+ G+++ A   L+ M+  G+ PN   YN+++ G+C +G 
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V++ ++    M       ++ +Y+ LI+GY K  ++  A +L   M ++ ++P  VTYN 
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584

Query: 241 LFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           +  G F +H  ++ A  ++ +M   G+  D + Y + I+G    G   ++ +L
Sbjct: 585 IISG-FSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 172/316 (54%), Gaps = 4/316 (1%)

Query: 92  NPDVVTY--NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N +V TY  N ++  +C      E   +  EM  + V P+VVT +V++D   + G +E A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             L++ M+  G++P    YN+++ G    GR ++A+E+F +M++ G   +V S+++LI G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAA 268
           +C+  E+E AL  Y EM  + + P VV+++ L IGLF    +++ A +   EM+  G+  
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCL-IGLFTRRGEMDHAAEYLREMREFGLMP 332

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y   I G C+ G ++EAL +   +    C  D+ +Y+ L++GLCK  RL  A EL 
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           + +    +  D+ T+  +IH  C DG ++KA   F  +  + + PD V +NTL+ G  R 
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452

Query: 389 NETSKVVELLHRMDER 404
            +  K  EL   M  R
Sbjct: 453 GDLGKANELWDDMHSR 468



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 149/312 (47%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P    ++ +IR +  +    EA   F  ++D  V       + ++  L + G     +  
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
             L++      N +  N ++  +C T +      +   ME      +V +++++++   +
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E A++L   M+SKGIKP +VTYN++  GL    + ++A ++F  M   GVA D  +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I G C+ G + EAL  ++ +R  +   D+ S+SCLI    + G +  A E    + 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L+ D V Y ++I   C  G M +A  +  +M A G  PD V +NTL+ G  +    S
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 393 KVVELLHRMDER 404
              ELL+ M ER
Sbjct: 387 DAEELLNEMKER 398



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 80/183 (43%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L + S +L+    P    ++ L     +  +   AF+ F  +  H V     A    +  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           L + G+     + +R +     E++  + + ++   CK+ +      +   + +  +  D
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVT+N+M+ A    G ++ A  L   M +KG+ P  V +N+++ G +RN    K  E+  
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253

Query: 400 RMD 402
            MD
Sbjct: 254 AMD 256


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 207/368 (56%), Gaps = 18/368 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     KL A G   + ++Y TLINGLC+ G T  AL L   +       G + + +AV
Sbjct: 156 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVD------GKLVQLNAV 209

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+IDG+ K+  V+ A +L  +M  K I+PDVVTY+++IRGF       +A  LF +M
Sbjct: 210 MYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+V TF++++D  CK G++++A  +L++M+   ++PN   +NTL+DGFC   ++
Sbjct: 270 ILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKM 329

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K +F  M   G K NV +Y  L++GYC  K++  A  +++ M  +G+   V +YN +
Sbjct: 330 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I +V++A KLF EM    +  D   Y + IDGLCK+G I  A +L   +     
Sbjct: 390 INGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQ 449

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+ +++ L    +LK          +G+   ++ T  I+I  LC  GK++ A  
Sbjct: 450 PPNIITYNSILNALLT--KLK---------DQGIQ-PNMHTDTILIKGLCQSGKLEAARK 497

Query: 362 LFLDMEAK 369
           +F D+  K
Sbjct: 498 VFEDLLVK 505



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 212/402 (52%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +LF  L           ++ ++  L ++ H    L+L ++M     EF  +  P+ V 
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQM-----EFEGI-NPNFVT 105

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I+  C+ G +  A  +L ++      PD++T N+ I+GFC     ++A     +++
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   + V++  +++ LCK G+   A QLL  +    V+ NA +YNT++DG      VN
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L+  M +     +V +YS LI G+    +++ A+ L+++M+ + IKP V T+N L 
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  ++++A  + D M    +  +   + T +DG CK+  + E   +F  +     +
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y  L+DG C   ++  A ++F+++ +  + A+V +YNIMI+  C   K+DKA  L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F++M  K + PD V +N+L+ G  ++ + S   +L++ M +R
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 192/369 (52%), Gaps = 6/369 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN +T++ LIN  C+ G    A ++  +++    E      PD +   T I G C +
Sbjct: 98  GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYE------PDIITLNTFIKGFCLK 151

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A     ++     + D V+Y ++I G C   ++  A +L   +  + VQ N V +
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D + K+  + +A  L   M+   + P+   Y+ L+ GF + G++  A +LF  M  
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMIL 271

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              K +V++++IL++G+CK   ++ A ++   M+ + IKP V T+NTL  G  +  +++ 
Sbjct: 272 ENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKE 331

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              +F  M + G+  +   Y + +DG C    + +A ++F T+       ++ SY+ +I+
Sbjct: 332 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMIN 391

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK  ++  A +LF  +    +I DVVTYN +I  LC  GK+  A  L  +M  +G  P
Sbjct: 392 GFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPP 451

Query: 374 DCVAFNTLM 382
           + + +N+++
Sbjct: 452 NIITYNSIL 460


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 210/385 (54%), Gaps = 9/385 (2%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +G   N  +Y+ +I  LCR G    A  L  +M     +F     PD V Y+T+IDG C 
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-----DFRS-STPDVVSYSTVIDGYCH 305

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G + KA +L+  M+ K + P+  TYNS+I   C    S EA+++  EMM Q + P+ V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++    K G +  A++  + M+   + P+   Y TL+ GF   G+V   + LF  M 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S G K +  +Y+ LI+ YCK  E+  A SL++EM+  G+ P +VTY  L  GL +  +++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D  +Y+ +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D  C+ G +  A +L   +    L   VVT+N++++  C  G ++    L   M  KG+ 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 373 PDCVAFNTLM-LGCIRN--NETSKV 394
           PD + +NTLM   CIRN  N T+K+
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKI 630



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 202/384 (52%), Gaps = 6/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ +    P+ + Y+TLI+G  + GH   A   F+EM++          PD +
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK------ISPDYI 399

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G  + G V + + L  +M  + + PD VTY ++I  +C A +   A  L  EM
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN+VT+  ++D LCK+G+++ A++LL+ M + G++ N  +YN++++G C  G +
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   ME  G   +  +Y+ +I+ YC+  +I+ A  L  EML +G++PTVVT+N L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +E   +L   M   G+  D   Y T +   C    +    ++++ +R    
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI G CK+  LK AW L+  +     +  V +YN +I       K+ +A +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGC 385
           LF +M   G+  D   +N  +  C
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMC 723



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 197/384 (51%), Gaps = 8/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L  ++      P+V++YST+I+G C  G    AL L ++M I G        KP+ 
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG-------LKPNR 328

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y +II  LCK G   +A+++L +M  + I PD V Y ++I GF        A + F E
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+ +T++ ++    + GK+ E   L   MI  G++P+   Y TL+D +C  G 
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  L   M  MG   N+ +Y  LI+G CK+ E++ A  L  EM  KG++  V  YN+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G+ +   +E+A KL  EM+  G+  D   Y T ID  C+ G I +A +L + +    
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +  + +++ L++G C  G L+    L   +    ++ D +TYN ++   C    M+   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++  M  +GVAPD   +N L+ G
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKG 652



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 12/390 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA--VIYTTIIDGLCKEG 74
           PN I +      L   GH   A  L +++++    +G+V   D+     + I +    EG
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS----YGLVVTVDSCNAFLSRIANN--SEG 241

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            ++ A ++  +     I+ +  +YN +I   C      EA RL ++M  +   P+VV++S
Sbjct: 242 -IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS 297

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D  C  G++++A +L++ M   G++PN + YN+++   C  G+   A+++   M S 
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               +   Y+ LI+G+ K   +  A   + EMLSK I P  +TY TL  G  +  +V   
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             LF EM   G+  D   Y T ID  CK G +V A  L   +  +    +I +Y  LIDG
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G L  A EL   + +  L  +V  YN M++ +C  G +++A  L  +ME  G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + + T++    R  +  K  +LL  M +R
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 12/396 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN I Y+T+ING C+ G    A  L +EM     E GV  K D ++++T+I GLC++G
Sbjct: 107 CFPNEIMYTTVINGFCKAGQVDQAFELLDEM----KERGV--KMDVLLHSTLIQGLCRKG 160

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-----MDQGVQPN 129
            +D+A E    M ++  +P+V+TYN+V+ G C AN  +EA  LF +M        G +P+
Sbjct: 161 RIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPD 219

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+++S ++D LCK  ++++A +  + M  +G  PN   Y++L+DG C   R +   EL +
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M+  G   N+  ++ +++   KN E E A   +  +L  G KP VVTYN    GL +  
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A+++  EM    V  D   Y + IDG CK G + +A ++F  + + +C     ++ 
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L+ G  +  + + A+ +   +     I  + TYN+++  +C    ++ A +++  M+ K
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              PDC  +  L+    R     +  E L  M+  N
Sbjct: 460 KRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 196/376 (52%), Gaps = 3/376 (0%)

Query: 9   KLKAFG--CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           + K+ G  C PNVITY+T++NGLC+      AL LF++M     E    C+PD + Y+T+
Sbjct: 168 QFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDM-EKRYEASHGCEPDVISYSTV 226

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ID LCK   VDKA E   +M+     P+VVTY+S+I G C  +  +E   L + M ++G 
Sbjct: 227 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGF 286

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
             N++ F+ ++  L KN + E+A Q  E +++ G +PN   YN  + G C  GRV+ A  
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYR 346

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           + + M       +V +YS +I+G+CK   ++ A  +++ M+     P  VT+ TL  G  
Sbjct: 347 ILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 406

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           E  +   AF++ ++M   G       Y   +D +C    +  ALE++  ++  K + D  
Sbjct: 407 EHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCN 466

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI  LC++ R+  A E    +    ++ +    + ++  LC  G++D+A  +  ++
Sbjct: 467 TYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNV 526

Query: 367 EAKGVAPDCVAFNTLM 382
              G  P    F  L+
Sbjct: 527 VEVGCQPLGETFKILV 542



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 200/397 (50%), Gaps = 12/397 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + N  T + L+N   +      A  L +E      E   +C P+ ++YTT+I+G CK 
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE------ELEPLCFPNEIMYTTVINGFCKA 124

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD+A ELL +MK++ +  DV+ ++++I+G C     +EA   F  M ++   PNV+T+
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITY 183

Query: 134 SVIMDELCKNGKMEEASQLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           + +++ LCK  +++EA +L + M        G  P+   Y+T++D  C   RV++A E F
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M ++GC  NV +YS LI+G CK       L L   M  KG    ++ +N +   L++ 
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            + E+A + F+ + + G   +   Y   + GLCK G + EA  +   +   K   D+ +Y
Sbjct: 304 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S +IDG CK+GR+  A ++F  +     I   VT+  ++H      K  +A  +  DM  
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G  P    +N LM      +     +E+ H+M  + 
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 192/414 (46%), Gaps = 51/414 (12%)

Query: 2   EAAALFTKLK-----AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC 56
           EA  LF  ++     + GCEP+VI+YST+I+ LC+      A   F+ M        V C
Sbjct: 198 EALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM------RAVGC 251

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------- 91
            P+ V Y+++IDGLCK     +  ELLL MK+K                           
Sbjct: 252 APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 311

Query: 92  ----------NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
                      P+VVTYN  + G C A   +EA R+ +EM++  V P+V+T+S I+D  C
Sbjct: 312 FFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFC 371

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G+M++A  +   M+     P+   + TL+ GF    +   A  +   M + G    + 
Sbjct: 372 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 431

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y++L++  C    +E AL +Y +M  K  +P   TY  L   L    +V+ A +  D M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +   V  +       ++ LCK G + EA  +   +  + C+    ++  L++ L     L
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL----YL 547

Query: 322 KIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           +  WE    L R    +AD  TY++ +  +C  GK D+A ++   M  KGV PD
Sbjct: 548 RKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPD 601



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 194/451 (43%), Gaps = 68/451 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRT------------------GHTIVALNLFE 43
           +A   F +++A GC PNV+TYS+LI+GLC+                   G  I+  N   
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297

Query: 44  EMINGNGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
             +  N E    C           KP+ V Y   + GLCK G VD+A  +LL+M +  + 
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+TY+S+I GFC A   ++A  +F  MM     P+ VTF  ++    ++ K  EA ++
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI----- 207
            E M+  G  P    YN LMD  C    V  A E++  M+    + +  +Y+ LI     
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 208 ---------------------NG---------YCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                                NG          CK  E++ A S+   ++  G +P   T
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +  L   L+   + E A KL   ++  G  AD   Y   +  +CK G   EA+E+   + 
Sbjct: 538 FKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV 594

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     D  +Y  ++  LC   R++ A   F  +        +VTY ++I   C+    D
Sbjct: 595 LKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMAD 654

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           +A  +F  M A G  P      TL   C+R+
Sbjct: 655 EAFRIFEAMVAAGFTPQAQTMRTLS-SCLRD 684



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 38/316 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +FT++    C P+ +T+ TL++G      +  A  + E+M+N     G +  P   
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA----GFI--PGLQ 431

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D +C    V+ A E+  +MK K   PD  TY  +I+  C A   +EAK     M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------------ 163
               V PN      +++ LCK G+++EA  +L+ ++++G +P                  
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 164 --------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                         +A  Y+  +   C  G+ + A E+   M   G + +  +Y  ++  
Sbjct: 552 EAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C    +E A++ + +M S+G  P +VTY  L          + AF++F+ M   G    
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQ 671

Query: 270 TWAYRTFIDGLCKNGY 285
               RT    L   GY
Sbjct: 672 AQTMRTLSSCLRDAGY 687


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 200/373 (53%), Gaps = 6/373 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  PNV+ Y+TLI+G C+ G       LF +M    GE  VV   +   YT +I+
Sbjct: 189 QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM----GELDVVA--NQYTYTVLIN 242

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G  K G      EL  +MK   I P+V TYNS+I   C     N A  LF EM ++GV  
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++ ++  LC+  ++ EA +L+  M + G+ PN   YNTL+DG+C  G +++A  LF
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 362

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M+S G   ++ +Y+ILI G+ + K   G   +  EM ++G+ P+ VTY  L   L   
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             +E+AF+++  M++ G+ AD + Y   I GLC  G + EA +LF++L  +  + +   Y
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +I G CK G    A  L   +    ++ +V +YN  I  LC D K  +A  L  DM  
Sbjct: 483 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIE 542

Query: 369 KGVAPDCVAFNTL 381
            G+ P    +N +
Sbjct: 543 LGLKPSISIWNMI 555



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 207/421 (49%), Gaps = 42/421 (9%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V+ +  +IN   R+     AL  F +MI      G+V  P +  +  ++  L K  F +
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGR----GLV--PGSNTFNNLLILLIKSNFFE 147

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA  +  + K  N+  DV ++  +I+G C     ++   +  +M + G+ PNVV ++ ++
Sbjct: 148 KAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 206

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  CKNG +E   QL   M ++ V  N + Y  L++GF   G      EL+  M+  G  
Sbjct: 207 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 266

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV++Y+ +I   C + ++  A  L+ EM  +G+   VVTYNTL  GL +  +V  A +L
Sbjct: 267 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 326

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR------------ILKC---- 301
              M+R G++ +  +Y T IDG C  G + +A  LF  ++            IL      
Sbjct: 327 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 386

Query: 302 ------------ELDIR-------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
                       E++ R       +Y+ L+D L +S  ++ A++++ S+ +  L+AD+  
Sbjct: 387 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 446

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           Y ++IH LC  G M +A  LF  ++   + P+ V +NT++ G  +   + + + LL  M 
Sbjct: 447 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMG 506

Query: 403 E 403
           E
Sbjct: 507 E 507



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 154/291 (52%), Gaps = 6/291 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+ K+K  G  PNV TY+++I   C  G    A  LF+EM     E GV C  + V Y T
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM----RERGVAC--NVVTYNT 309

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC+E  V +A+ L+ +MK   ++P++++YN++I G+C   + ++A  LF +M   G
Sbjct: 310 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 369

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P++ T+++++    +       + ++  M   G+ P+   Y  LMD    +  + +A 
Sbjct: 370 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 429

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++ SME  G   +++ Y +LI+G C   +++ A  L+  +    +KP  V YNT+  G 
Sbjct: 430 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 489

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            +     RA +L  EM  +G+  +  +Y + I  LCK+    EA  L + +
Sbjct: 490 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +++  G   NV+TY+TLI GLC+    + A  L   M            P+ + 
Sbjct: 288 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLIS 341

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C  G +DKA  L  QMK    +P + TYN +I GF  A +S     +  EM 
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 401

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ VT++++MD L ++  +E+A Q+   M + G+  + ++Y  L+ G C+ G + 
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            A +LF S++ M  K N   Y+ +I GYCK      AL L  EM   G+ P V +YN+
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 156/310 (50%), Gaps = 1/310 (0%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           V+ + ++I     +    +A   F +M+ +G+ P   TF+ ++  L K+   E+A ++  
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
              +  V+ + + +  ++ G C  G +++  E+   ME MG   NV  Y+ LI+G CKN 
Sbjct: 155 -ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +IE    L+ +M    +     TY  L  G F++   +   +L+++M+  G+  + + Y 
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + I   C +G +  A ELF  +R      ++ +Y+ LI GLC+  R+  A  L   + R 
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  ++++YN +I   C+ G +DKA  LF  M++ G +P    +N L+ G      ++ V
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 395 VELLHRMDER 404
            +++  M+ R
Sbjct: 394 TDMVREMEAR 403


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 213/401 (53%), Gaps = 8/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDA 60
           EA AL  ++KA GC P+V+TY++LI+G  + G         EE+    GE  G  C+PD 
Sbjct: 212 EARALLARMKAIGCSPDVVTYNSLIDGYGKCGE-------LEEVEKLVGEMRGCGCRPDV 264

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +++  CK G +++A     +MK + +  +VVT+++ +  FC      EA +LF +
Sbjct: 265 VTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQ 324

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN VT++ ++D  CK G++++A  L   M+Q GV  N   Y  L+DG C  G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A+++F  ME  G + N   Y+ LI+G+   K  E ALSL SEM  KG++  V  Y  
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL  + +++ A  L ++M   G+  +   Y   +D   K     EA+ L + +    
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +I +Y  L+DGLCK+G +  A   F+ +    L  +V  Y  ++  LC +G++DKA 
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  KG++ D V   +LM G ++         L  +M
Sbjct: 565 LLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 195/402 (48%), Gaps = 10/402 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +L A    PNV T++ +I+ LC+ G    A  L   M        + C PD V 
Sbjct: 182 AWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMK------AIGCSPDVVT 231

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++IDG  K G +++ ++L+ +M+     PDVVTYN+++  FC       A   F EM 
Sbjct: 232 YNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMK 291

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  NVVTFS  +D  CKNG + EA +L   M   G++PN   Y  L+DG C  GR++
Sbjct: 292 REGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLD 351

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G   NV +Y++L++G CK  ++  A  ++  M   GI+   + Y TL 
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F     ERA  L  EM+  G+  D   Y   I GLC    + EA  L   +     +
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK 471

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ ++D   K+ +   A  L   +       ++VTY  ++  LC  G +D+A   
Sbjct: 472 PNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH 531

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F  M   G+ P+  A+  L+ G  +N    K V LL  M ++
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDK 573



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 207/432 (47%), Gaps = 43/432 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  +++  GC P+V+TY+ L+N  C+ G    A + F EM       GV+   + V
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM----KREGVMA--NVV 300

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++T +D  CK G V +A +L  QM+ K + P+ VTY  ++ G C A   ++A  L  EM
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV  NVVT++V++D LCK GK+ EA  +  LM + G+R N  +Y TL+ G  +    
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYC------------------------------ 211
            RA  L   M+  G + +V  Y  LI G C                              
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 212 -----KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                K ++   A++L  +M+  G +P +VTY  L  GL +   ++ A   F++M   G+
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +  AY   +DGLCKNG + +A+ L   +      LD    + L+DG  K G L+ A+ 
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFA 600

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    L  D+  Y   +   C    + +A ++  +M   G+ PD V +N L+  C 
Sbjct: 601 LKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQ 660

Query: 387 R--NNETSKVVE 396
           +  N E + +++
Sbjct: 661 KLGNMEEAAILQ 672



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G +PN +TY+ L++G C+ G    AL L  EM+       VV      
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVV------ 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLCKEG V +A+++   M+   I  + + Y ++I G     +S  A  L  EM
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G++ +V  +  ++  LC   K++EA  LL  M + G++PN  +Y  +MD      + 
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G + N+ +Y  L++G CK   I+ A+S +++M+  G++P V  Y  L
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++++A  L DEM   G++ D     + +DG  K G + +A  L   +     
Sbjct: 551 VDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+  Y+C + G C    ++ A E+   +    +  D V YN +I+     G M++A  
Sbjct: 611 QLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAI 670

Query: 362 LFLDMEA 368
           L  +ME+
Sbjct: 671 LQNEMES 677



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 176/342 (51%), Gaps = 4/342 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +  T++  L   G +D A   L ++++  + P+  T N ++        S  A RLF   
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLF--- 186

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +Q   PNV TF++++D LCK G + EA  LL  M  IG  P+   YN+L+DG+   G +
Sbjct: 187 -EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL 245

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              ++L   M   GC+ +V +Y+ L+N +CK   +E A S ++EM  +G+   VVT++T 
Sbjct: 246 EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTF 305

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V  A KLF +M+  G+  +   Y   +DG CK G + +AL L   +     
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L++ +Y+ L+DGLCK G++  A ++F  + R  + A+ + Y  +IH        ++A  
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALS 425

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M+ KG+  D   +  L+ G     +  +   LL++MDE
Sbjct: 426 LLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 4/279 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T + I+  L +    E A +L E +      PN F +N ++D  C  G +  A+
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEAR 214

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+++GC  +V +Y+ LI+GY K  E+E    L  EM   G +P VVTYN L    
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++ERA+  F EM+R GV A+   + TF+D  CKNG + EA++LF  +R+   + + 
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNE 334

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+CL+DG CK+GRL  A  L + + +  +  +VVTY +++  LC +GK+ +A D+F  
Sbjct: 335 VTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL 394

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ME  G+  + + + TL+ G      + + + LL  M ++
Sbjct: 395 MERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDK 433



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 108/193 (55%), Gaps = 6/193 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+   G  PN++TY  L++GLC+ G    A++ F +M+    + G+  +P+  
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV----DLGL--EPNVQ 545

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLCK G +DKA  LL +M DK ++ D V   S++ G     +  +A  L  +M
Sbjct: 546 AYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  ++  +   C    ++EA ++L  MI+ G+ P+A VYN L++     G +
Sbjct: 606 INSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665

Query: 182 NRAKELFVSMESM 194
             A  L   MES+
Sbjct: 666 EEAAILQNEMESL 678


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 210/385 (54%), Gaps = 9/385 (2%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +G   N  +Y+ +I  LCR G    A  L  +M     +F     PD V Y+T+IDG C 
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-----DFRS-STPDVVSYSTVIDGYCH 305

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G + KA +L+  M+ K + P+  TYNS+I   C    S EA+++  EMM Q + P+ V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++    K G +  A++  + M+   + P+   Y TL+ GF   G+V   + LF  M 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S G K +  +Y+ LI+ YCK  E+  A SL++EM+  G+ P +VTY  L  GL +  +++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D  +Y+ +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D  C+ G +  A +L   +    L   VVT+N++++  C  G ++    L   M  KG+ 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 373 PDCVAFNTLM-LGCIRN--NETSKV 394
           PD + +NTLM   CIRN  N T+K+
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKI 630



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 201/384 (52%), Gaps = 6/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ +    P+ + Y+TLI+G  + GH   A   F+EM++          PD +
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK------ISPDYI 399

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G  + G V + + L  +M  + + PD VTY ++I  +C A +   A  L  EM
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN+VT+  ++D LCK+G+++ A++LL+ M + G++ N  +YN++++G C  G +
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   ME  G   +  +Y+ +I+ YC+  +I+ A  L  EML +G++PTVVT+N L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +E   +L   M   G+  D   Y T +   C    +    ++++ +R    
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI G CK+  LK AW L+  +     +  V +YN +I       K  +A +
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGC 385
           LF +M   G+  D   +N  +  C
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMC 723



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 197/384 (51%), Gaps = 8/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L  ++      P+V++YST+I+G C  G    AL L ++M I G        KP+ 
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG-------LKPNR 328

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y +II  LCK G   +A+++L +M  + I PD V Y ++I GF        A + F E
Sbjct: 329 YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDE 388

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+ +T++ ++    + GK+ E   L   MI  G++P+   Y TL+D +C  G 
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  L   M  MG   N+ +Y  LI+G CK+ E++ A  L  EM  KG++  V  YN+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G+ +   +E+A KL  EM+  G+  D   Y T ID  C+ G I +A +L + +    
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +  + +++ L++G C  G L+    L   +    ++ D +TYN ++   C    M+   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++  M  +GVAPD   +N L+ G
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKG 652



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 12/390 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA--VIYTTIIDGLCKEG 74
           PN I +      L   GH   A  L +++++    +G+V   D+     + I +    EG
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS----YGLVVTVDSCNAFLSRIANN--SEG 241

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            ++ A ++  +     I+ +  +YN +I   C      EA RL ++M  +   P+VV++S
Sbjct: 242 -IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS 297

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D  C  G++++A +L++ M   G++PN + YN+++   C  G+   A+++   M S 
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               +   Y+ LI+G+ K   +  A   + EMLSK I P  +TY TL  G  +  +V   
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             LF EM   G+  D   Y T ID  CK G +V A  L   +  +    +I +Y  LIDG
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G L  A EL   + +  L  +V  YN M++ +C  G +++A  L  +ME  G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + + T++    R  +  K  +LL  M +R
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDR 567


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 207/399 (51%), Gaps = 9/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + E+M +G+G     C  +  +   
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHG-----CAANTTLCNI 325

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A + L  M     +PD ++Y +V++G C A    +AK L  EM+ + 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A+ L+E M + G   N   YN L++GFC+ GRV+ A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF SM    CK N  +Y+ L+ G C  + ++ A  L +EML K   P VVT+N L    
Sbjct: 446 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A +L ++M  HG   +   Y T +DG+ K+    EALEL   L       DI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS +I  L +  R++ A ++FH +    +    V YN ++ ALC     D A D F  
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M + G  P+ + + TL+ G    +   +  +LL  +  R
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 661



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  +  + G  P+V   + LI  LCR G T  A  +                 D  
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV------DVF 114

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G C+ G +D A+ L+  M    + PD  TY  +IRG C      EA  L  +M
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VVT++V+++ +CK+    +A ++L+ M   G  PN   YN +++G C  GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P  VT++ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +    C
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY+ ++ GLC++ R + A EL   + R     + VT+N  I  LC  G +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G   + V +N L+ G          +EL + M
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 200/437 (45%), Gaps = 47/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR G    A  L   M            PDA 
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---------PVAPDAY 146

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II GLC  G V +A  LL  M  +   P VVTY  ++   C +    +A  +  EM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
             +G  PN+VT++VI++ +C+ G++++A + L  +   G +P+   Y T++ G       
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 175 ----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                       FC  G V RA ++   M   GC  N    +I+
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK   ++ A    + M S G  P  ++Y T+  GL    + E A +L  EM R   
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   + TFI  LC+ G I +A  L   +    CE++I +Y+ L++G C  GR+  A E
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF+S+P      + +TY  ++  LC   ++D A +L  +M  K  AP+ V FN L+    
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 387 RNNETSKVVELLHRMDE 403
           +     + +EL+ +M E
Sbjct: 504 QKGLMDEAIELVEQMME 520



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 172/336 (51%), Gaps = 10/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + ++GC P+ I+Y+T++ GLCR      A  L +EM+  N      C P+ V
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN------CPPNEV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I  LC++G +++A  L+ QM +     ++VTYN+++ GFC     + A  LF  M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN +T++ ++  LC   +++ A++LL  M+Q    PN   +N L+  FC  G +
Sbjct: 452 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   GC  N+ +Y+ L++G  K+   E AL L   ++S G+ P +VTY+++
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSI 568

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +VE A K+F  +Q  G+      Y   +  LCK      A++ F  +    C
Sbjct: 569 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 628

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y  LI+GL     LK   +L   L  RGVL
Sbjct: 629 MPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 38/342 (11%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+ +R     +D  EA RL      +G  P+V   + ++  LC+ G+  +A+++L    +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G   + F YNTL+ G+C  G+++ A+ L  SM       + ++Y+ +I G C    +  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           ALSL  +ML +G +P+VVTY  L   + +     +A ++ DEM+  G   +   Y   I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF------HSLP 332
           G+C+ G + +A E    L     + D  SY+ ++ GLC + R +   ELF      + +P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 333 -------------RGVLI----------------ADVVTYNIMIHALCADGKMDKAHDLF 363
                        RG ++                A+    NI+I+ +C  G++D A    
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +M + G +PD +++ T++ G  R        ELL  M  +N
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 214/406 (52%), Gaps = 12/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +K+ G  PN  TY+ L+ G C+ G    A N+ E M   N        PD  
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVW 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLC EG +++A +L  +M++  + PDVV+YN++I G    +  +EA +L  EM
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PN VT ++++   CK GKM++AS  +  M + G  P+   YNTL++G+C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 182 NRAKELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             A   F +M+ MG K+   +  + + ++   C+ K++E A  L S    +G     V+Y
Sbjct: 435 GEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL +G F+   V+RA KL+DEM+   +   T  Y   I GLC+ G   +A+     L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  +Y+ ++ G C+ G ++ A++  + +       DV T NI++  LC +G ++K
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  LF    +KG A D V +NTL+    +         LL  M+E+
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 195/375 (52%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++     P+V++Y+TLING         A  L EEM     E GV  KP+AV
Sbjct: 331 EAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM----SEKGV--KPNAV 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++   CKEG +D A   + +M++   +PD VTYN++I G+C A +  EA R   EM
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++ + VT + I+  LC+  K+EEA +LL    + G   +   Y TL+ G+   G V
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA +L+  M+      +  +Y+ +I G C+  + E A+S  +E+L  G+ P   TYNT+
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      VE+AF+  ++M  +    D +     + GLC  G + +AL+LF T      
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGK 624

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +Y+ LI  LCK GRL  A+ L   +    L  D  TYN +I AL   G++ +A +
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 362 LFLDMEAKGVAPDCV 376
               M  KG  PD V
Sbjct: 685 FMSKMLEKGNLPDQV 699



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 202/391 (51%), Gaps = 6/391 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G  PNV T++ +I G C       A+    E +N  G++   C PD V Y TI+D LCK
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAV----EFLNVMGKYN--CSPDNVTYNTILDTLCK 255

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G +  A++LL+ MK + + P+  TYN ++ G+C      EA  +   M    + P+V T
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWT 315

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++ LC  G++EEA +L + M  + + P+   YNTL++G     +++ A +L   M 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G K N  +++I++  YCK  +++ A +  ++M   G  P  VTYNTL  G  +   + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+  DEM R  +  D+    T +  LC+   + EA +L  + R     +D  SY  LI
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G  K G +  A +L+  +    +I   VTYN +I  LC  GK ++A     ++   G+ 
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           PD   +NT++ G  R  +  K  +  ++M E
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVE 586



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 176/388 (45%), Gaps = 38/388 (9%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE- 113
           +  P   +  T I    + G    A ++  +MK   + P+++T N+++        S+  
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 114 --AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             ++  F + +  G+ PNV TF++++   C   K ++A + L +M +    P+   YNT+
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK------------------- 212
           +D  C  GR+  A++L + M+S G   N  +Y+IL+ GYCK                   
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 213 ----------------NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                              IE A  L  EM +  + P VV+YNTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L +EM   GV  +   +   +   CK G + +A      +       D  +Y+ LI+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G +  A+     + R  +  D VT N ++  LC + K+++A+ L      +G   D V
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++ TL++G  ++    + ++L   M E+
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEK 517



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 166/368 (45%), Gaps = 52/368 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A+   TK++  G  P+ +TY+TLING C+ G+   A    +EM   N +   V      
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 56  ---CKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              C+                     D V Y T+I G  K+G VD+A +L  +MK+K I 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTYN +I G C    + +A     E+++ G+ P+  T++ I+   C+ G +E+A Q 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+ F  N L+ G C+ G + +A +LF +  S G   +  +Y+ LI   CK
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT-- 270
              ++ A +L SEM  K + P   TYN +   L +  ++  A +   +M   G   D   
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700

Query: 271 ---------------------WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
                                 AY  +I  LC  G   +A+ +F   +     +D  +Y 
Sbjct: 701 QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 310 CLIDGLCK 317
            L+DGL K
Sbjct: 761 NLMDGLIK 768



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 3/317 (0%)

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS- 150
           +P     ++ I  +  +   + A ++F +M    ++PN++T + +++ L +       S 
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 151 --QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
             +     I++G+ PN   +N ++ G+CL  +   A E    M    C  +  +Y+ +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
             CK   +  A  L  +M S+G+ P   TYN L  G  ++  ++ A  + + M ++ +  
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D W Y   I+GLC  G I EA +L   +  LK   D+ SY+ LI+G  +  ++  A++L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +    +  + VT+NIM+   C +GKMD A +    ME  G +PDCV +NTL+ G  + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 389 NETSKVVELLHRMDERN 405
               +    +  M  +N
Sbjct: 432 GNMGEAFRTMDEMGRKN 448


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 8/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L  +++  GC P+V++Y+T+I+G C  G     + L +EM + G        KP+ 
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG-------LKPNL 180

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y++II  LCK G V + +++L +M  + + PD V Y ++I GFC   ++  A +LF E
Sbjct: 181 YTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSE 240

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + P+ + FS ++  L  +GK+ EA +L   MI+ G  P+   Y  L+DG+C  G 
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M  +G   NV +Y+ L +G CK+ E++ A  L  EM  KG++  + TYNT
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +   + +A KL +EM+  G+  DT  Y T +D   K G +V+A EL R +    
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +  + +++ L++GLC SG+L+    L   +    ++ +  TYN ++   C    M  + 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
           +++  M A+GV PD   +N L+ G
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKG 504



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 211/385 (54%), Gaps = 7/385 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F++    G   N  +Y+ L+N L R G    A +L   M     EF   C PD V YTT
Sbjct: 97  VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM-----EFKG-CIPDVVSYTT 150

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IIDG C  G + K  +L+ +M+ K + P++ TY+S+I   C +    E +++  EMM +G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P+ V ++ ++D  CK G  + A +L   M    + P++  ++ L+ G   +G+V  A 
Sbjct: 211 VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEAD 270

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF  M   G + +  +Y+ LI+GYCK  E++ A  L+++M+  G+ P VVTY  L  GL
Sbjct: 271 KLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGL 330

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +++ A +L  EM R G+  +   Y T ++GLCK G I++A++L   ++      D 
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L+D   K+G +  A EL   +    L   VVT+N++++ LC  GK++    L   
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 366 MEAKGVAPDCVAFNTLMLG-CIRNN 389
           M  KG+ P+   +N++M   CIRNN
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNN 475



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 193/342 (56%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++ L + G + +A  LL++M+ K   PDVV+Y ++I G+C+  +  +  +L  EM 
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++PN+ T+S I+  LCK+GK+ E  ++L  M++ GV P+  +Y TL+DGFC  G   
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  ME+     +  ++S LI G   + ++  A  L++EM+ KG +P  VTY  L 
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ ++++AF L ++M + G+  +   Y    DGLCK+G +  A EL   +     +
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L+I +Y+ +++GLCK+G +  A +L   +    L  D +TY  ++ A    G+M KA +L
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL 412

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M  +G+ P  V FN LM G   + +      LL  M E+
Sbjct: 413 LREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 6/360 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF++++A    P+ I +S LI GL  +G  + A  LF EMI    E      PD V 
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE------PDEVT 287

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDG CK G + KA  L  QM    + P+VVTY ++  G C + + + A  L  EM 
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMC 347

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+Q N+ T++ I++ LCK G + +A +L+E M + G+ P+   Y TLMD +  TG + 
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A+EL   M   G +  V ++++L+NG C + ++E    L   ML KGI P   TYN++ 
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                 + +  + +++  M   GV  D+  Y   I G CK   + EA  L + +   +  
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L   SY+ LI G  K  +L  A +LF  + R  L+A    YN+ +     +G M+   +L
Sbjct: 528 LTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 196/379 (51%), Gaps = 6/379 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   +  ++   G  P+ + Y+TLI+G C+ G+T  A  LF EM     E   +  PD+
Sbjct: 197 VEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM-----EAREIV-PDS 250

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + ++ +I GL   G V +A +L  +M  K   PD VTY ++I G+C   +  +A  L  +
Sbjct: 251 IAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQ 310

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ PNVVT++ + D LCK+G+++ A++LL  M + G++ N   YNT+++G C  G 
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A +L   M+  G   +  +Y+ L++ Y K  E+  A  L  EML +G++PTVVT+N 
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    ++E   +L   M   G+  +   Y + +   C    +  + E++R +    
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQG 490

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LI G CK+  +K AW L   +          +YN +I       K+ +A 
Sbjct: 491 VVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEAR 550

Query: 361 DLFLDMEAKGVAPDCVAFN 379
            LF +M  +G+      +N
Sbjct: 551 QLFEEMRREGLVASAEIYN 569



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 175/303 (57%), Gaps = 7/303 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  PNV+TY+ L +GLC++G    A  L  EM     +  +       
Sbjct: 303 KAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS------ 356

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI++GLCK G + +A +L+ +MK+  ++PD +TY +++  +    +  +A+ L  EM
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+QP VVTF+V+M+ LC +GK+E+  +LL+ M++ G+ PNA  YN++M  +C+   +
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             + E++  M + G   +  +Y+ILI G+CK + ++ A  L+ EM+ K    T  +YN L
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNAL 536

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+  ++  A +LF+EM+R G+ A    Y  F+D   + G +   LEL     I KC
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE-AIEKC 595

Query: 302 ELD 304
            LD
Sbjct: 596 LLD 598



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 195/395 (49%), Gaps = 9/395 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV-IYTTIIDG 69
           K +G +P+V  +      L   G    A   F++++N    +GV     +  +Y T +  
Sbjct: 33  KDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLN----YGVALSAGSCNLYLTCLSS 86

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
             K   +    ++  +     +  +  +YN ++          EA  L + M  +G  P+
Sbjct: 87  --KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV+++ I+D  C  G++++  QL++ M   G++PN + Y++++   C +G+V   +++  
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   +   Y+ LI+G+CK    + A  L+SEM ++ I P  + ++ L  GL    
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V  A KLF+EM + G   D   Y   IDG CK G + +A  L   +  +    ++ +Y+
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            L DGLCKSG L  A EL H + R  L  ++ TYN +++ LC  G + +A  L  +M+  
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ PD + + TLM    +  E  K  ELL  M +R
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR 419


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 211/405 (52%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++KA G  P ++T+ +LI  LC    T  AL +F +MI+      +  KPDA 
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMID------MKVKPDAF 123

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +I  LCK   +D A     +M      PD VTY  ++     A    +  ++F EM
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 183

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P +VT++ +++  CK G++++A  L+  +   G  P+  +Y+TL+DG C   R 
Sbjct: 184 LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ELF    + G   +V  Y+  I+G CK  +++ A +++ +M+  G  P  V+YN +
Sbjct: 244 DEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA-LELFRTLRILK 300
              L + ++V  A +L D+                +DGLCK+  + EA + L R L    
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +YS +IDGLCK+ RL  A+ +   + R   + DVVTY  +I A C  G++D+A 
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +LF  M  +G A D VA+N L+ G  R  +  + + ++  M  R 
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 194/426 (45%), Gaps = 40/426 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + N  T ++L+      G    A  +F++      E   + +PD   Y T+I G CK 
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKD------ELVTLFRPDDFTYGTLIRGFCKA 65

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             + +A  LL +MK   I P +VT+ S+IR  C  N +++A ++F +M+D  V+P+   +
Sbjct: 66  EQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLY 125

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V++  LCK  K++ A+   E M+Q G  P+   Y  L+       +  +  ++F  M S
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    + +Y+ ++NGYCK   I+ ALSL   +   G  P+   Y+TL  GL +  + + 
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 254 AFKLFD---------------------------------EMQRHGVAADTWAYRTFIDGL 280
           A +LF+                                 +M   G A D  +Y   I  L
Sbjct: 246 ARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIAD 339
           CK+  + EA EL       KC   +   + L+DGLCKS R++ A  +    L  G     
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPS 365

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVTY+ +I  LC   ++D A+ +   M   G  PD V +  ++    +     +  EL  
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 425

Query: 400 RMDERN 405
           RM ER 
Sbjct: 426 RMHERG 431



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 156/296 (52%), Gaps = 44/296 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  +LK  G  P+   YSTLI+GLC+      A  LFE M  G+ +       D +
Sbjct: 210 QALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE-MAAGDVQ-------DVI 261

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+ I GLCK G +D+AK + ++M +    PD V+YN +I   C  N  +EAK L  + 
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------- 162
           M++   P V   +V++D LCK+ ++EEA  +LE M++ G R                   
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381

Query: 163 -----------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                            P+   Y  ++D FC  GR++ A+ELF  M   GC  +V +Y+I
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           LI GYC+  +++ A+++  EM  +GI+P VV+ +T+  GL +  +VE A  L ++M
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 7/93 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   GC  +V+ Y+ LI G CR      A+ + EEM  G G      +P+ V
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEM-AGRG-----IQPNVV 472

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
             +TI+DGLCKE  V++A+ L+ +M  +++ PD
Sbjct: 473 SLSTIVDGLCKESRVEEARLLMEKMNFESL-PD 504



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 56/139 (40%)

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           R G   +T+   + ++    +G   EA  +F+   +     D  +Y  LI G CK+ ++ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  L   +    +   +VT+  +I  LC     DKA  +F  M    V PD   +  ++
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 383 LGCIRNNETSKVVELLHRM 401
               + N+         RM
Sbjct: 130 GHLCKINKLDLAASYFERM 148


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 208/401 (51%), Gaps = 9/401 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++KA G  P ++T+ +LI  LC    T  AL +F +MI+      +  KPDA +YT 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMID------MKVKPDAFLYTV 54

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LCK   +D A     QM      PD VTY  ++     A    +  ++F EM+ +G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P +VT++ +++  CK G++++A  L+  +   G  P+  +Y+TL+DG C   R   A+
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF    + G   +V  Y+  I+G CK  +++ A +++ +M+  G  P  V+YN +   L
Sbjct: 175 ELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 232

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA-LELFRTLRILKCELD 304
            + ++V  A +L D+                +DGLCK+  + EA + L R L        
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +YS +IDGLCK+ RL  A+ +   + R   + DVVTY  +I A C  G++D+A +LF 
Sbjct: 293 VVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M  +G A D VA+N L+ G  R  +  + + ++  M  R 
Sbjct: 353 RMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 137/266 (51%), Gaps = 44/266 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  +LK  G  P+   YSTLI+GLC+      A  LFE M  G+ +       D +
Sbjct: 137 QALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-MAAGDVQ-------DVI 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+ I GLCK G +D+AK + ++M +    PD V+YN +I   C  N  +EAK L  + 
Sbjct: 189 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 248

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------- 162
           M++   P V   +V++D LCK+ ++EEA  +LE M++ G R                   
Sbjct: 249 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADR 308

Query: 163 -----------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                            P+   Y  ++D FC  GR++ A+ELF  M   GC  +V +Y+I
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNI 368

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGI 231
           LI GYC+  +++ A+++  EM  +GI
Sbjct: 369 LIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 207/382 (54%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  K+   G   N+ TY+  I GLC  G    A+ L    ++G   + V   PD 
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL----VDGMRAYAV---PDV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLCK+    +A   L +M ++   PD  TYN++I G+C  +   EA  L  +
Sbjct: 256 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ VT+  +++ LC  G +E A +L       G++P+  VYN+L+ G CL G 
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  P V T+NT
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +Y+ LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A+
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 555

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            LF  +E KG +     FNTL+
Sbjct: 556 LLFQKLEEKGYSATADTFNTLI 577



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      PN+  ++ +++ LC+ G  + A  L  ++I       +       
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF------ 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   I GLC+ G + +A  L+  M+   + PDVVTYN++IRG C  +   EA      M
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+QG  P+  T++ I+D  CK   ++EA++LL+  +  G  P+   Y +L++G C  G V
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA ELF   ++ G K ++  Y+ L+ G C    I  AL + +EM  +G  P + TYN +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  +  A  + ++    G   D + + T IDG CK   +  AL+L   +     
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +++GLCK+G++    E F  +       + +TYNI+I   C   KM++A  
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + + M  +G+ PD V+FNTL+ G  RN +      L  +++E+
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 201/400 (50%), Gaps = 11/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ A G  P++ T++  +   C T    +AL L   + +            AV
Sbjct: 103 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----------AV 152

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G    A++L  QM   ++ P++  +N V+   C   D  EA  L  ++
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 212

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  N+ T+++ +  LC+ G++ EA +L++ M    V P+   YNTL+ G C     
Sbjct: 213 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMP 271

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M + GC  + F+Y+ +I+GYCK   ++ A  L  + + KG  P  VTY +L
Sbjct: 272 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     VERA +LF+E Q  G+  D   Y + + GLC  G I+ AL++   +    C
Sbjct: 332 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI++Y+ +I+GLCK G +  A  + +       + DV T+N +I   C   K+D A  
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 451

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G+APD + +N+++ G  +  + ++V E    M
Sbjct: 452 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 9/386 (2%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
            + Y T++ GL   GHT  A  LF++M++ +        P+   +  ++  LCK G V +
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLE 204

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A  LL ++  + ++ ++ TYN  IRG C A    EA RL   M    V P+VVT++ ++ 
Sbjct: 205 AGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIR 263

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCK    +EA   L  M+  G  P+ F YNT++DG+C    V  A EL       G   
Sbjct: 264 GLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 323

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  +Y  LING C   ++E AL L++E  +KGIKP +V YN+L  GL     +  A ++ 
Sbjct: 324 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 383

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSCLIDGLCK 317
           +EM   G   D   Y   I+GLCK G I +A  +     I+K  L D+ +++ LIDG CK
Sbjct: 384 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCK 442

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
             +L  A +L   +    +  D +TYN +++ LC  GK+++ ++ F +M  KG  P+ + 
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDE 403
           +N L+    R+N+  +  +++ +M +
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQ 528



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   GC P+  TY+T+I+G C+      A  L ++ +      G V  PD V
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC EG V++A EL  + + K I PD+V YNS+++G C       A ++  EM
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ T++++++ LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P  +TYN L
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L     
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ LI        + +A ++F  +      AD  TY ++I   C    +D+A+ 
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++M  KG  P    F  ++     N+   + V ++H M
Sbjct: 627 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 666



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L       G  P+ +TY +LINGLC  G    AL LF E     G      KPD V
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKG-----IKPDIV 361

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y +++ GLC +G +  A +++ +M ++  +PD+ TYN VI G C   + ++A  +  + 
Sbjct: 362 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 421

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V TF+ ++D  CK  K++ A QL+E M + G+ P+   YN++++G C  G+V
Sbjct: 422 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 481

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ P  V++NTL
Sbjct: 482 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 541

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E A+ LF +++  G +A    + T I        +  A ++F  +     
Sbjct: 542 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 601

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A  
Sbjct: 602 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 661

Query: 362 LFLDMEAKGVAPDCV 376
           +   M   GV P+ V
Sbjct: 662 IIHIMVKIGVVPEVV 676



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 190/413 (46%), Gaps = 38/413 (9%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P A  Y  I+D L    + D+A +
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMD------LFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFC------------------------------YAN-D 110
           + ++M    ++PD+ T+   +R FC                              YA+  
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           +++A++LF +M+   V PN+  F+ ++  LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            + G C  GR+  A  L   M +     +V +Y+ LI G CK    + A+     M+++G
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P   TYNT+  G  +I  V+ A +L  +    G   D   Y + I+GLC  G +  AL
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ELF   +    + DI  Y+ L+ GLC  G +  A ++ + +       D+ TYNI+I+ L
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G +  A  +  D   KG  PD   FNTL+ G  +  +    ++L+ RM E
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 5/323 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    + G +  A +   +M      P    YN+++     A   ++A ++++ M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P++ T ++ +   C   +   A +LL  +   G    A  Y T++ G    G  
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 167

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+   + TYN  
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   R +    C
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +IDG CK   ++ A EL         + D VTY  +I+ LCA+G +++A +
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF + +AKG+ PD V +N+L+ G
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKG 369



 Score = 45.4 bits (106), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 6/156 (3%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++  A   F+ M          AY   +D L    Y  +A +++  +       D+ +++
Sbjct: 65  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 124

Query: 310 CLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             +   C + R  IA  L  +LP RG      V Y  ++  L A G    A  LF  M  
Sbjct: 125 IRLRSFCLTARPHIALRLLRALPHRGA-----VAYCTVVCGLYAHGHTHDARQLFDQMLH 179

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             V P+  AFN ++    +  +  +   LL ++ +R
Sbjct: 180 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 215


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 207/382 (54%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  K+   G   N+ TY+  I GLC  G    A+ L    ++G   + V   PD 
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL----VDGMRAYAV---PDV 258

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLCK+    +A   L +M ++   PD  TYN++I G+C  +   EA  L  +
Sbjct: 259 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ VT+  +++ LC  G +E A +L       G++P+  VYN+L+ G CL G 
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  P V T+NT
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +Y+ LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A+
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            LF  +E KG +     FNTL+
Sbjct: 559 LLFQKLEEKGYSATADTFNTLI 580



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      PN+  ++ +++ LC+ G  + A  L  ++I       +       
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF------ 225

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   I GLC+ G + +A  L+  M+   + PDVVTYN++IRG C  +   EA      M
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+QG  P+  T++ I+D  CK   ++EA++LL+  +  G  P+   Y +L++G C  G V
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA ELF   ++ G K ++  Y+ L+ G C    I  AL + +EM  +G  P + TYN +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  +  A  + ++    G   D + + T IDG CK   +  AL+L   +     
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +++GLCK+G++    E F  +       + +TYNI+I   C   KM++A  
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + + M  +G+ PD V+FNTL+ G  RN +      L  +++E+
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 201/400 (50%), Gaps = 11/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ A G  P++ T++  +   C T    +AL L   + +            AV
Sbjct: 106 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----------AV 155

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G    A++L  QM   ++ P++  +N V+   C   D  EA  L  ++
Sbjct: 156 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 215

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  N+ T+++ +  LC+ G++ EA +L++ M    V P+   YNTL+ G C     
Sbjct: 216 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMP 274

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M + GC  + F+Y+ +I+GYCK   ++ A  L  + + KG  P  VTY +L
Sbjct: 275 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 334

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     VERA +LF+E Q  G+  D   Y + + GLC  G I+ AL++   +    C
Sbjct: 335 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 394

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI++Y+ +I+GLCK G +  A  + +       + DV T+N +I   C   K+D A  
Sbjct: 395 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 454

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G+APD + +N+++ G  +  + ++V E    M
Sbjct: 455 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 204/385 (52%), Gaps = 9/385 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y T++ GL   GHT  A  LF++M++ +        P+   +  ++  LCK G V +A
Sbjct: 155 VAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLEA 208

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             LL ++  + ++ ++ TYN  IRG C A    EA RL   M    V P+VVT++ ++  
Sbjct: 209 GLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 267

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK    +EA   L  M+  G  P+ F YNT++DG+C    V  A EL       G   +
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
             +Y  LING C   ++E AL L++E  +KGIKP +V YN+L  GL     +  A ++ +
Sbjct: 328 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 387

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSCLIDGLCKS 318
           EM   G   D   Y   I+GLCK G I +A  +     I+K  L D+ +++ LIDG CK 
Sbjct: 388 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCKR 446

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            +L  A +L   +    +  D +TYN +++ LC  GK+++ ++ F +M  KG  P+ + +
Sbjct: 447 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 506

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           N L+    R+N+  +  +++ +M +
Sbjct: 507 NILIENFCRSNKMEEASKVIVKMSQ 531



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   GC P+  TY+T+I+G C+      A  L ++ +      G V  PD V
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC EG V++A EL  + + K I PD+V YNS+++G C       A ++  EM
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ T++++++ LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P  +TYN L
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L     
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ LI        + +A ++F  +      AD  TY ++I   C    +D+A+ 
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++M  KG  P    F  ++     N+   + V ++H M
Sbjct: 630 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 669



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L       G  P+ +TY +LINGLC  G    AL LF E     G      KPD V
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKG-----IKPDIV 364

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y +++ GLC +G +  A +++ +M ++  +PD+ TYN VI G C   + ++A  +  + 
Sbjct: 365 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 424

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V TF+ ++D  CK  K++ A QL+E M + G+ P+   YN++++G C  G+V
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 484

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ P  V++NTL
Sbjct: 485 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E A+ LF +++  G +A    + T I        +  A ++F  +     
Sbjct: 545 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 604

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A  
Sbjct: 605 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 664

Query: 362 LFLDMEAKGVAPDCV 376
           +   M   GV P+ V
Sbjct: 665 IIHIMVKIGVVPEVV 679



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 191/413 (46%), Gaps = 38/413 (9%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M      F   C P A  Y  I+D L    + D+A +
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERM----DLFA--CPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFC------------------------------YAN-D 110
           + ++M    ++PD+ T+   +R FC                              YA+  
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 169

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           +++A++LF +M+   V PN+  F+ ++  LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            + G C  GR+  A  L   M +     +V +Y+ LI G CK    + A+     M+++G
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P   TYNT+  G  +I  V+ A +L  +    G   D   Y + I+GLC  G +  AL
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 348

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ELF   +    + DI  Y+ L+ GLC  G +  A ++ + +       D+ TYNI+I+ L
Sbjct: 349 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G +  A  +  D   KG  PD   FNTL+ G  +  +    ++L+ RM E
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 5/342 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    + G +  A +   +M      P    YN+++     A   ++A ++++ M
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P++ T ++ +   C   +   A +LL  +   G    A  Y T++ G    G  
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 170

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+   + TYN  
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   R +    C
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +IDG CK   ++ A EL         + D VTY  +I+ LCA+G +++A +
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF + +AKG+ PD V +N+L+ G          +++++ M E
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 6/156 (3%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++  A   F+ M          AY   +D L    Y  +A +++  +       D+ +++
Sbjct: 68  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 127

Query: 310 CLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             +   C + R  IA  L  +LP RG      V Y  ++  L A G    A  LF  M  
Sbjct: 128 IRLRSFCLTARPHIALRLLRALPHRGA-----VAYCTVVCGLYAHGHTHDARQLFDQMLH 182

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             V P+  AFN ++    +  +  +   LL ++ +R
Sbjct: 183 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 218


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 212/416 (50%), Gaps = 41/416 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +K+ G  PN  TY+ L+ G CR G    A  + E M   N        P   
Sbjct: 266 EARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN------LLPTVW 319

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++G C +G +D+A  +  +M+  N+ PDVVTYN++I G     DS+E   L  EM
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ N VT+++I+  +CK G M EA+  L+ M + G+ P+   YNTL+  +C  G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 182 NRAKELFVSMESMGCKHNVF-----------------------------------SYSIL 206
            +A  +   M S G K + +                                   SY IL
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I GY K+++ + AL+L+ EM  + I P+ +TYN++  GL +  +V++A    +EM  +G+
Sbjct: 500 ILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL 559

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   I G C  G + +A +    +     + D+ + + L+ GLC+ G L+ A +
Sbjct: 560 VPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALK 619

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           LF++L       DVVTYN +I +LC +GK + A+DL  +MEAK + PD   +  ++
Sbjct: 620 LFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVII 675



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 201/424 (47%), Gaps = 41/424 (9%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            G  PN  +++ LI G C       AL    + +N   EFG  C PD V Y TI+D L K
Sbjct: 207 LGVVPNTNSFNILIYGYCLESKVKDAL----DWVNKMSEFG--CVPDTVSYNTILDALLK 260

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              + +A++LLL MK K ++P+  TYN ++ G+C      EA ++   M    + P V T
Sbjct: 261 RRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWT 320

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++  C +GK++EA ++ + M ++ V P+   YNTL+DG       +    L   M+
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD 380

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G K N  +Y+I++   CK   +  A +   +M   G+ P  VTYNTL     +  ++ 
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLC----------------KNGYIVE-------- 288
           +AF++ DEM   G+  DTW   T +  LC                K GYI++        
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500

Query: 289 -----------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
                      AL L+  ++  +      +Y+ +I GLC+S ++  A +  + +    L+
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV 560

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D  TYNI+IH  C +G ++KA     +M      PD    N L+ G  R     K ++L
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 398 LHRM 401
            + +
Sbjct: 621 FNTL 624



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 210/401 (52%), Gaps = 3/401 (0%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F K+K     PN++T +TL+N L R   +   L L  +++  + + GVV  P+   
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSIL-LARQVLKDSIKLGVV--PNTNS 215

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I G C E  V  A + + +M +    PD V+YN+++          EA+ L ++M 
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN  T+++++   C+ G ++EA++++E+M +  + P  + YN L++GFC  G+++
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   ME M    +V +Y+ LI+G  + ++     SL  EM  KG+K   VTYN + 
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             + +   +  A    D+M+ +G++ D   Y T I   CK G + +A  +   +     +
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D  + + ++  LC   +L  A+ L  S  +   I D V+Y I+I     D K D+A +L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +M+ + + P  + +N+++ G  ++ +  + ++ L+ M E
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 209/452 (46%), Gaps = 65/452 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++     P+V+TY+TLI+G  +   +    +L EEM     + GV C  +AV
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM----DKKGVKC--NAV 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+  +CK+G + +A   L +M++  ++PD VTYN++I  +C A    +A R+  EM
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL---------------------------- 153
             +G++ +  T + I+  LC   K++EA  LL                            
Sbjct: 450 TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKG 509

Query: 154 -------ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                  + M +  + P+   YN+++ G C + +V++A +    M   G   +  +Y+I+
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+C    +E A   ++EM+    KP V T N L  GL     +E+A KLF+ +   G 
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK 629

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y T I  LCK G    A +L   +   K   D  +Y  +I  L  +GR+K A E
Sbjct: 630 DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689

Query: 327 ---------LFH----SLPRG--VLIADV--------VTYNIMIHALCADGKMDKAHDLF 363
                    + H     L +G  VL ++V        + Y+  I+ LC   K   A  LF
Sbjct: 690 FTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLF 749

Query: 364 LDMEAKGVAPDCVAFNTLMLGCI-RNNETSKV 394
           +++  +GVA +   +  LM G I R   TSK 
Sbjct: 750 VEVTKEGVALNKYTYLNLMEGLIKRRKSTSKA 781



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 154/315 (48%), Gaps = 3/315 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK---NGKMEEA 149
           P     ++ I  +   +  + A ++F +M     +PN++T + +M+ L +   +  +  A
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            Q+L+  I++GV PN   +N L+ G+CL  +V  A +    M   GC  +  SY+ +++ 
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             K + ++ A  L  +M SKG+ P   TYN L  G   +  ++ A K+ + M R+ +   
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            W Y   ++G C +G I EA  +   +  +    D+ +Y+ LIDG  +       + L  
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  +  + VTYNI++  +C  G M +A      ME  G++PDCV +NTL+    +  
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437

Query: 390 ETSKVVELLHRMDER 404
           +  K   ++  M  +
Sbjct: 438 KMGKAFRMMDEMTSK 452



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 6/175 (3%)

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---NGYIVE 288
           +P+    +T      ++ Q   A ++F++M+R     +     T ++ L +   +  I+ 
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A ++ +    L    +  S++ LI G C   ++K A +  + +     + D V+YN ++ 
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR---NNETSKVVELLHR 400
           AL     + +A DL LDM++KG++P+   +N L+ G  R     E +KV+E++ R
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTR 311


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 206/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  KL  FGCE ++++Y+ ++ GLC          L +EM+       V C P+ V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E+L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + +EA +LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP  V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +  C
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +++   +  D V +N ++    +  ET + ++    M
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   GC P    Y  ++   CR+G    ++ + E M +  G     C  D  
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKG-----CTLDTG 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C++G VD+A  LL ++       D+V+YN+V++G C A    + + L  EM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M + G  P+  +Y T++DG C  G +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ ++ G C  +  + A  L SEM  K      VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA----NEILNRMPSYGL--KPNVVCYNT 326

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC      +A+ELL +M  K+   D VT+N ++  FC     +    L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C  GR   A+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + E A +L + M   G++ +T  Y +    L + G + + +++F  ++      D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK      A + F  +     + +  TY ++I  L ++G   +A +L  +
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 366 MEAKG 370
           + ++G
Sbjct: 627 LCSRG 631



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 7/335 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G +PNV+ Y+T++ GLC       A  L  EM   +      C  D V 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD------CPLDDVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++D  C+ G VD+  ELL QM      PDV+TY +VI GFC     +EA  L   M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN V++++++  LC  G+  +A +L+  MIQ G  PN   +NTL++  C  G V 
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A EL   M   GC  ++ SYS +I+G  K  + E AL L + M++KGI P  + Y+++ 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +V +  ++FD ++   + +D   Y   I  LCK      A++ F  +    C 
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
            +  +Y+ LI GL   G  K A EL   L  RG L
Sbjct: 599 PNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 3/342 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++ G C+ G   +            + P+  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P    + VI++  C++G    + ++LE M   G   +    N +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   +   GC+ ++ SY+ ++ G C  K       L  EM+     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L      ER  ++  +M  HG   D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++  Y+ ++ GLC + R K A EL   + +     D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +L   M + G  PD + + T++ G  +     + V LL  M 
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I+P+ + Y+S+          N+  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAKELFVSMESMG 195
               A+EL   + S G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV ++ ++   C+ G   + +    L   + V PNA+ +  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC      Y +++   C++     ++ +   M +KG        N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I +++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI  LC++G  +   E+   +       D+  Y  +I  +C +G ++ A+++   M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G+ P+ V +NT++ G        +  ELL  M +++
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K  G  PN+ T + +++   +   T +A  L+ EM      F +  +    
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM------FRMNIRSSLY 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LCKEG + KAKE +  M+   + P+VVTYN++I G C       A+ +F  M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
            D+G++P+  T++  +  LCK G++EEAS L+  M++ G+ PNA  YN L+DG+C     
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337

Query: 177 ------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                         + GR+  A  +   M   G   +  +++IL
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           INGYC+  + + A  L  EM+ KGI+PT+VTY +L   L + ++++ A  LF ++Q+ G+
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   IDG C NG I  A +L + +  +K   D  +Y+ L+ G C+ G+++ A +
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   + R  +  D ++YN +I      G M  A  +  +M   G  P  + +N L+ G  
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 387 RNNETSKVVELLHRM 401
           +N E     ELL  M
Sbjct: 578 KNQEGEHAEELLKEM 592



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 175/348 (50%), Gaps = 41/348 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +K  G EP+  TY++ I+GLC+ G    A  L  +M+ G    G+V  P+AV 
Sbjct: 270 ARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG----GLV--PNAVT 323

Query: 63  YTTIIDGLCKEGFVDKA-----------------------------------KELLLQMK 87
           Y  +IDG C +G +DKA                                     ++ +M+
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           +K + PD VT+N +I G+C   D+  A  L  EM+ +G+QP +VT++ ++  L K  +M+
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMK 443

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  L   + Q G+ P+  V+N L+DG C  G ++RA +L   M++M    +  +Y+ L+
Sbjct: 444 EADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLM 503

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            GYC+  ++E A  L  EM  +GIKP  ++YNTL  G  +   ++ AF++ DEM   G  
Sbjct: 504 QGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFD 563

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
                Y   I GLCKN     A EL + +       D  +Y  +I+ +
Sbjct: 564 PTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 192/384 (50%), Gaps = 41/384 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      ++  G +PNV+TY+T+I+G C  G    A  +F+ M +   E      PD  
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE------PDCY 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y + I GLCKEG +++A  L+ +M +  + P+ VTYN++I G+C   D ++A     EM
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           + +G+  ++VT+++ +  L   G+M +A  +++ M + G+ P+A  +N L++G+C     
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA 407

Query: 177 ---------------------------LTGRVNRAKE---LFVSMESMGCKHNVFSYSIL 206
                                      + G+ NR KE   LF  ++  G   ++  ++ L
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+C N  I+ A  L  EM +  + P  +TYNTL  G     +VE A +L DEM+R G+
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D  +Y T I G  K G + +A  +   +     +  I +Y+ LI GLCK+   + A E
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587

Query: 327 LFHSLPRGVLIADVVTYNIMIHAL 350
           L   +    +  D  TY  +I A+
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 179/343 (52%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            +I+  ++   C+    ++A E    +K+K   P++ T N ++  F   N +  A  L+ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM    ++ ++ TF+++++ LCK GK+++A + +  M  +GV+PN   YNT++ G CL G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +  RA+ +F +M+  G + + ++Y+  I+G CK   +E A  L  +ML  G+ P  VTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G      +++A+   DEM   G+ A    Y  FI  L   G + +A  + + +R  
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +++ LI+G C+ G  K A+ L   +    +   +VTY  +I+ L    +M +A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             LF  ++ +G+ PD + FN L+ G   N    +  +LL  MD
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 138/251 (54%), Gaps = 6/251 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  G  P+ +T++ LING CR G    A  L +EM+      G   +P  V
Sbjct: 374 DADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV------GKGIQPTLV 427

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  L K   + +A  L  +++ + + PD++ +N++I G C   + + A +L  EM
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  V P+ +T++ +M   C+ GK+EEA QLL+ M + G++P+   YNTL+ G+   G +
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN+E E A  L  EM+SKGI P   TY ++
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607

Query: 242 FIGLFEIHQVE 252
              +  +  +E
Sbjct: 608 IEAMETVDDLE 618



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 114/240 (47%)

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +++ L+  +C   + N A E F  ++  G   N+ + + +++ + K    + A  LY+
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM    I+ ++ T+N +   L +  ++++A +    M+  GV  +   Y T I G C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
               A  +F+T++    E D  +Y+  I GLCK GRL+ A  L   +  G L+ + VTYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I   C  G +DKA+    +M +KG+    V +N  +              ++  M E+
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 257 LFDEMQ--RHGV-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           +FDE+   R  V A  T  +   +   C+     EALE F  ++      +I + + ++ 
Sbjct: 130 IFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLS 189

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              K  R ++AW L+  + R  + + + T+NIMI+ LC +GK+ KA +    ME  GV P
Sbjct: 190 LFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKP 249

Query: 374 DCVAFNTLMLG-CIR 387
           + V +NT++ G C+R
Sbjct: 250 NVVTYNTIIHGHCLR 264


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 207/399 (51%), Gaps = 9/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + E+M +G+G     C  +  +   
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHG-----CAANTTLCNI 356

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A + L  M     +PD ++Y +V++G C A    +AK L  EM+ + 
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A+ L+E M + G   N   YN L++GFC+ GRV+ A 
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF SM    CK N  +Y+ L+ G C  + ++ A  L +EML K   P VVT+N L    
Sbjct: 477 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A +L ++M  HG   +   Y T +DG+ K+    EALEL   L       DI
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS +I  L +  R++ A ++FH +    +    V YN ++ ALC     D A D F  
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M + G  P+ + + TL+ G    +   +  +LL  +  R
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 692



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 200/437 (45%), Gaps = 47/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR G    A  L   M            PDA 
Sbjct: 127 DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---------PVAPDAY 177

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II GLC  G V +A  LL  M  +   P VVTY  ++   C +    +A  +  EM
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
             +G  PN+VT++VI++ +C+ G++++A + L  +   G +P+   Y T++ G       
Sbjct: 238 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 297

Query: 175 ----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                       FC  G V RA ++   M   GC  N    +I+
Sbjct: 298 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 357

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK   ++ A    + M S G  P  ++Y T+  GL    + E A +L  EM R   
Sbjct: 358 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 417

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   + TFI  LC+ G I +A  L   +    CE++I +Y+ L++G C  GR+  A E
Sbjct: 418 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF+S+P      + +TY  ++  LC   ++D A +L  +M  K  AP+ V FN L+    
Sbjct: 478 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534

Query: 387 RNNETSKVVELLHRMDE 403
           +     + +EL+ +M E
Sbjct: 535 QKGLMDEAIELVEQMME 551



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 193/399 (48%), Gaps = 9/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA L  +  + G  P+V   + LI  LCR G T  A  +                 D   
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV------DVFA 146

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++ G C+ G +D A+ L+  M    + PD  TY  +IRG C      EA  L  +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G QP+VVT++V+++ +CK+    +A ++L+ M   G  PN   YN +++G C  GRV+
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P  VT++ L 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                   VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +    C 
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  SY+ ++ GLC++ R + A EL   + R     + VT+N  I  LC  G +++A  L
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M   G   + V +N L+ G          +EL + M
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 172/336 (51%), Gaps = 10/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + ++GC P+ I+Y+T++ GLCR      A  L +EM+  N      C P+ V
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN------CPPNEV 422

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I  LC++G +++A  L+ QM +     ++VTYN+++ GFC     + A  LF  M
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN +T++ ++  LC   +++ A++LL  M+Q    PN   +N L+  FC  G +
Sbjct: 483 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   GC  N+ +Y+ L++G  K+   E AL L   ++S G+ P +VTY+++
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSI 599

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +VE A K+F  +Q  G+      Y   +  LCK      A++ F  +    C
Sbjct: 600 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 659

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y  LI+GL     LK   +L   L  RGVL
Sbjct: 660 MPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 38/333 (11%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A  S  A RL      +G  P+V   + ++  LC+ G+  +A+++L    + G   + F 
Sbjct: 87  ATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 146

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YNTL+ G+C  G+++ A+ L  SM       + ++Y+ +I G C    +  ALSL  +ML
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +G +P+VVTY  L   + +     +A ++ DEM+  G   +   Y   I+G+C+ G + 
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF------HSLP--------- 332
           +A E    L     + D  SY+ ++ GLC + R +   ELF      + +P         
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 333 ----RGVLI----------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
               RG ++                A+    NI+I+ +C  G++D A     +M + G +
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           PD +++ T++ G  R        ELL  M  +N
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 206/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  KL  FGCE ++++Y+ ++ GLC          L +EM+       V C P+ V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I  LC+ G  ++  E+L QM +    PD+  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV ++ ++  LC   + +EA +LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP  V+Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +  C
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SYS +IDGL K+G+ + A EL + +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +++   +  D V +N ++    +  ET + ++    M
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++   GC P    Y  ++   CR+G    ++ + E M +  G     C  D  
Sbjct: 129 DALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM-HAKG-----CTLDTG 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +++ +C++G VD+A  LL ++       D+V+YN+V++G C A    + + L  EM
Sbjct: 183 NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+VTF+ ++  LC+NG  E   ++L  M + G  P+  +Y T++DG C  G +
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M S G K NV  Y+ ++ G C  +  + A  L SEM  K      VT+N L
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V+R  +L ++M  HG   D   Y T I+G CK G I EA+ L +++    C
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ ++ GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +PD ++++T++ G  +  +T + +ELL+ M
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P++  Y+T+I+G+C+ GH  VA     E++N    +G+  KP+ V Y T
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA----NEILNRMPSYGL--KPNVVCYNT 326

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC      +A+ELL +M  K+   D VT+N ++  FC     +    L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+V+T++ +++  CK G ++EA  LL+ M   G +PN   Y  ++ G C  GR   A+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   GC  N  +++ LIN  CK   +E A+ L  +ML  G  P +++Y+T+  GL
Sbjct: 447 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 506

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  + E A +L + M   G++ +T  Y +    L + G + + +++F  ++      D 
Sbjct: 507 GKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDA 566

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I  LCK      A + F  +     + +  TY ++I  L ++G   +A +L  +
Sbjct: 567 VLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626

Query: 366 MEAKG 370
           + ++G
Sbjct: 627 LCSRG 631



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 171/335 (51%), Gaps = 7/335 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G +PNV+ Y+T++ GLC       A  L  EM   +      C  D V 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD------CPLDDVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++D  C+ G VD+  ELL QM      PDV+TY +VI GFC     +EA  L   M 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN V++++++  LC  G+  +A +L+  MIQ G  PN   +NTL++  C  G V 
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A EL   M   GC  ++ SYS +I+G  K  + E AL L + M++KGI P  + Y+++ 
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +V +  ++FD ++   + +D   Y   I  LCK      A++ F  +    C 
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
            +  +Y+ LI GL   G  K A EL   L  RG L
Sbjct: 599 PNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 3/342 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++ G C+ G   +            + P+  T+  V+RG C      +A  +  E
Sbjct: 80  VAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P    + VI++  C++G    + ++LE M   G   +    N +++  C  G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L   +   GC+ ++ SY+ ++ G C  K       L  EM+     P +VT+NT
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L      ER  ++  +M  HG   D   Y T IDG+CK G++  A E+   +    
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++  Y+ ++ GLC + R K A EL   + +     D VT+NI++   C +G +D+  
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +L   M + G  PD + + T++ G  +     + V LL  M 
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L +++   GC PN +T++TLIN LC+ G    A+ L ++M +NG       C PD
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+T+IDGL K G  ++A ELL  M +K I+P+ + Y+S+          N+  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V ++ ++  LCK  + + A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAKELFVSMESMG 195
               A+EL   + S G
Sbjct: 616 LAKEAQELLSELCSRG 631



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV ++ ++   C+ G   + +    L   + V PNA+ +  ++ G C  GR+  A E+  
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   GC      Y +++   C++     ++ +   M +KG        N +   + E  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            V+ A  L  ++   G  AD  +Y   + GLC      +  EL   +  + C  +I +++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI  LC++G  +   E+   +       D+  Y  +I  +C +G ++ A+++   M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G+ P+ V +NT++ G        +  ELL  M +++
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 207/382 (54%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  K+   G   N+ TY+  I GLC  G    A+ L    ++G   + V   PD 
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL----VDGMRAYAV---PDV 256

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLCK+    +A   L +M ++   PD  TYN++I G+C  +   EA  L  +
Sbjct: 257 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 316

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ VT+  +++ LC  G +E A +L       G++P+  VYN+L+ G CL G 
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 376

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  P V T+NT
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 436

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +Y+ LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A+
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 556

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            LF  +E KG +     FNTL+
Sbjct: 557 LLFQKLEEKGYSATADTFNTLI 578



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      PN+  ++ +++ LC+ G  + A  L  ++I       +       
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF------ 223

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   I GLC+ G + +A  L+  M+   + PDVVTYN++IRG C  +   EA      M
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+QG  P+  T++ I+D  CK   ++EA++LL+  +  G  P+   Y +L++G C  G V
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA ELF   ++ G K ++  Y+ L+ G C    I  AL + +EM  +G  P + TYN +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  +  A  + ++    G   D + + T IDG CK   +  AL+L   +     
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +++GLCK+G++    E F  +       + +TYNI+I   C   KM++A  
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + + M  +G+ PD V+FNTL+ G  RN +      L  +++E+
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 201/400 (50%), Gaps = 11/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ A G  P++ T++  +   C T    +AL L   + +            AV
Sbjct: 104 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----------AV 153

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G    A++L  QM   ++ P++  +N V+   C   D  EA  L  ++
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 213

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  N+ T+++ +  LC+ G++ EA +L++ M    V P+   YNTL+ G C     
Sbjct: 214 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMP 272

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M + GC  + F+Y+ +I+GYCK   ++ A  L  + + KG  P  VTY +L
Sbjct: 273 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 332

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     VERA +LF+E Q  G+  D   Y + + GLC  G I+ AL++   +    C
Sbjct: 333 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI++Y+ +I+GLCK G +  A  + +       + DV T+N +I   C   K+D A  
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 452

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G+APD + +N+++ G  +  + ++V E    M
Sbjct: 453 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 9/386 (2%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
            + Y T++ GL   GHT  A  LF++M++ +        P+   +  ++  LCK G V +
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNLAAFNKVLHALCKRGDVLE 205

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A  LL ++  + ++ ++ TYN  IRG C A    EA RL   M    V P+VVT++ ++ 
Sbjct: 206 AGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIR 264

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCK    +EA   L  M+  G  P+ F YNT++DG+C    V  A EL       G   
Sbjct: 265 GLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVP 324

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  +Y  LING C   ++E AL L++E  +KGIKP +V YN+L  GL     +  A ++ 
Sbjct: 325 DQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVM 384

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSCLIDGLCK 317
           +EM   G   D   Y   I+GLCK G I +A  +     I+K  L D+ +++ LIDG CK
Sbjct: 385 NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA-IMKGYLPDVFTFNTLIDGYCK 443

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
             +L  A +L   +    +  D +TYN +++ LC  GK+++ ++ F +M  KG  P+ + 
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDE 403
           +N L+    R+N+  +  +++ +M +
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQ 529



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++   GC P+  TY+T+I+G C+      A  L ++ +      G V  PD V
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC EG V++A EL  + + K I PD+V YNS+++G C       A ++  EM
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ T++++++ LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P  +TYN L
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L     
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ LI        + +A ++F  +      AD  TY ++I   C    +D+A+ 
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++M  KG  P    F  ++     N+   + V ++H M
Sbjct: 628 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 667



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L       G  P+ +TY +LINGLC  G    AL LF E     G      KPD V
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA-QAKG-----IKPDIV 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y +++ GLC +G +  A +++ +M ++  +PD+ TYN VI G C   + ++A  +  + 
Sbjct: 363 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V TF+ ++D  CK  K++ A QL+E M + G+ P+   YN++++G C  G+V
Sbjct: 423 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKV 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ P  V++NTL
Sbjct: 483 NEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTL 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E A+ LF +++  G +A    + T I        +  A ++F  +     
Sbjct: 543 IYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 602

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A  
Sbjct: 603 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 662

Query: 362 LFLDMEAKGVAPDCV 376
           +   M   GV P+ V
Sbjct: 663 IIHIMVKIGVVPEVV 677



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 190/413 (46%), Gaps = 38/413 (9%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P A  Y  I+D L    + D+A +
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMD------LFACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFC------------------------------YAN-D 110
           + ++M    ++PD+ T+   +R FC                              YA+  
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           +++A++LF +M+   V PN+  F+ ++  LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            + G C  GR+  A  L   M +     +V +Y+ LI G CK    + A+     M+++G
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P   TYNT+  G  +I  V+ A +L  +    G   D   Y + I+GLC  G +  AL
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ELF   +    + DI  Y+ L+ GLC  G +  A ++ + +       D+ TYNI+I+ L
Sbjct: 347 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G +  A  +  D   KG  PD   FNTL+ G  +  +    ++L+ RM E
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 5/323 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    + G +  A +   +M      P    YN+++     A   ++A ++++ M
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P++ T ++ +   C   +   A +LL  +   G    A  Y T++ G    G  
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 168

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+   + TYN  
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   R +    C
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +IDG CK   ++ A EL         + D VTY  +I+ LCA+G +++A +
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF + +AKG+ PD V +N+L+ G
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKG 370



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 6/156 (3%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++  A   F+ M          AY   +D L    Y  +A +++  +       D+ +++
Sbjct: 66  RLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHT 125

Query: 310 CLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
             +   C + R  IA  L  +LP RG      V Y  ++  L A G    A  LF  M  
Sbjct: 126 IRLRSFCLTARPHIALRLLRALPHRGA-----VAYCTVVCGLYAHGHTHDARQLFDQMLH 180

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             V P+  AFN ++    +  +  +   LL ++ +R
Sbjct: 181 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 216


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 211/383 (55%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ A    P++ITY+TLI+G C+ G+   +  + E M   + E      P  +
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE------PSLI 285

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++ GL K G V+ A+ +L +MKD    PD  T++ +  G+     +  A  ++   
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D GV+ N  T S++++ LCK GK+E+A ++L   +  G+ PN  +YNT++DG+C  G +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+    +ME  G K +  +Y+ LI  +C+  E+E A    ++M  KG+ P+V TYN L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G    ++ ++ F +  EM+ +G   +  +Y T I+ LCK   ++EA  + R +     
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              +R Y+ LIDG C  G+++ A+     + +  +  ++VTYN +I  L   GK+ +A D
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L L++  KG+ PD   +N+L+ G
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISG 608



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF  L+  G  P+  + + L++ L +T    V +N+F  ++  +       +P   
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    K   V K  EL  +MK   I P V  YN +I G C     N+A++LF EM
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+++T++ ++D  CK G  E++ ++ E M    + P+   +NTL+ G    G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   M+ +G   + F++SIL +GY  N++ E AL +Y   +  G+K    T + L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E+A ++       G+  +   Y T IDG C+ G +V A      +     
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+CLI   C+ G ++ A +  + +    +   V TYNI+I       + DK  D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           +  +ME  G  P+ V++ TL+
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLI 501



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 198/391 (50%), Gaps = 10/391 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + N  T S L+N LC+ G    A    EE++      G+V  P+ VIY T+IDG C++
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKA----EEILGREMAKGLV--PNEVIYNTMIDGYCRK 402

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +  A+  +  M+ + + PD + YN +IR FC   +   A++   +M  +GV P+V T+
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++    +  + ++   +L+ M   G  PN   Y TL++  C   ++  A+ +   ME 
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    V  Y++LI+G C   +IE A     EML KGI+  +VTYNTL  GL    ++  
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L  E+ R G+  D + Y + I G    G +   + L+  ++    +  +++Y  LI 
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI- 641

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LC    +++   LF  +    L  D++ YN ++H     G M+KA +L   M  K +  
Sbjct: 642 SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D   +N+L+LG ++  +  +V  L+  M+ R
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 34/426 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE------------------ 43
           +A  +  +  A G  PN + Y+T+I+G CR G  + A    E                  
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431

Query: 44  -------EMINGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                  EM N   E   +      P    Y  +I G  ++   DK  ++L +M+D    
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VV+Y ++I   C  +   EA+ +  +M D+GV P V  +++++D  C  GK+E+A + 
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M++ G+  N   YNTL+DG  +TG+++ A++L + +   G K +VF+Y+ LI+GY  
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++  ++LY EM   GIKPT+ TY+ L I L     +E   +LF EM    +  D   
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LKPDLLV 667

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   +     +G + +A  L + +      LD  +Y+ LI G  K G+L     L   + 
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  +  TYNI++   C       A+  + +M+ KG   D    N L+ G ++    S
Sbjct: 728 AREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG-LKEEWRS 786

Query: 393 KVVELL 398
           K  E++
Sbjct: 787 KEAEIV 792



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 38/364 (10%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K+K  G  P+V TY+ LI G  R        ++ +EM   NG       P+ V Y T+I+
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM-EDNGTM-----PNVVSYGTLIN 502

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK   + +A+ +   M+D+ ++P V  YN +I G C      +A R   EM+ +G++ 
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N+VT++ ++D L   GK+ EA  LL  + + G++P+ F YN+L+ G+   G V R   L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622

Query: 189 VSMESMGCKHNVFSYSILI---------------------------NG----YCKNKEIE 217
             M+  G K  + +Y +LI                           NG    Y  + ++E
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L  +M+ K I     TYN+L +G  ++ ++     L DEM    +  +   Y   +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C+    + A   +R ++     LD+   + L+ GL +  R K A E+  S   G ++
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA-EIVISEMNGRML 801

Query: 338 ADVV 341
            DV 
Sbjct: 802 GDVT 805



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 147/279 (52%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA  LF  + ++G+ P+  + ++++D L K  +      +   +++   RP+ F+Y   
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +        V +  ELF  M+      +VF Y++LI+G CK K +  A  L+ EML++ +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P+++TYNTL  G  +    E++FK+ + M+   +      + T + GL K G + +A  
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           + + ++ L    D  ++S L DG   + + + A  ++ +     +  +  T +I+++ALC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            +GK++KA ++     AKG+ P+ V +NT++ G  R  +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 10/280 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   ++  G  P V  Y+ LI+G C  G    A    +EM+    E  +V     
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT---- 566

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+IDGL   G + +A++LLL++  K + PDV TYNS+I G+ +A +      L+ E
Sbjct: 567 --YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P + T+ +++  LC    +E   +L     ++ ++P+  VYN ++  + + G 
Sbjct: 625 MKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M       +  +Y+ LI G  K  ++    SL  EM ++ ++P   TYN 
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  G  E+     A+  + EMQ  G   D       + GL
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 102/211 (48%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +LF ++ + G   +  S ++L++   K K+    ++++  +L    +P+   Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                 ++  V +  +LF+ M+   +    + Y   IDGLCK   + +A +LF  +   +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +Y+ LIDG CK+G  + ++++   +    +   ++T+N ++  L   G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           ++  +M+  G  PD   F+ L  G   N + 
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 9/225 (4%)

Query: 184 AKELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            KELF   S+ S   KH+ FSY   S+L+N   ++K I  A  L+  + ++GI P+  + 
Sbjct: 92  PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSL 147

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L   L +  Q      +F  +         + Y   I    K   + + LELF  ++ 
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    +  Y+ LIDGLCK  R+  A +LF  +    L+  ++TYN +I   C  G  +K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +   M+A  + P  + FNTL+ G  +         +L  M +
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 6/396 (1%)

Query: 8   TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII 67
           TK+   GC P  +T + LING C+ G    AL   ++ I    E      PD V Y T +
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE------PDQVTYNTFV 307

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
             LC+ G V  A +++  M  +  +PDV TYN+VI       + +EAK +  +M+D+G  
Sbjct: 308 HCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 367

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  TF+ ++  LC   ++EEA  L   +   G+ P+ + +N L++  C  G  +    L
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M+S GC  +  +Y+ILI+  C   ++  AL L  EM S G   + VTYNT+   L +
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             ++E A ++FD+M  HG++     + T IDGLCK   I +A EL   +     +    +
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ ++   CK G LK A ++  ++       DVVTY  +I+ LC  G+   A  L   M 
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            KG+ P   A+N ++    R N     + L   M E
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 201/386 (52%), Gaps = 6/386 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K  A G EP+ +TY+T ++ LC+ GH   AL + + M+    +      PD  
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD------PDVF 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+ L K G +D+AK ++ QM D+   PD  T+N++I   C  N   EA  L  E+
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V TF+++++ LCK G      +L E M   G  P+   YN L+D  C  G++
Sbjct: 397 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKL 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   MES GC  +  +Y+ +I+  CK   IE A  ++ +M + GI  + VT+NTL
Sbjct: 457 VNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A +L ++M + G+      Y + +   CK G + +A ++  T+     
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E+D+ +Y  LI+GLCK+GR ++A +L   +    +      YN +I +L     +  A  
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIR 387
           LF +M   G  PD + +  +  G  R
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCR 662



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 202/397 (50%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +++ ++   G +P+V+T +TLI  LCR      A+ + EEM +          PD   +T
Sbjct: 181 SVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH------AVAPDETTFT 234

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +P  VT N +I G+C      +A     + +  
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ VT++  +  LC+NG +  A ++++LM+Q G  P+ F YNT+++     G ++ A
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  +  +++ LI   C    +E AL L  E+  KG+ P V T+N L   
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++       +LF+EM+  G A D   Y   ID LC  G +V AL+L + +    C   
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +ID LCK  R++ A E+F  +    +    VT+N +I  LC   ++D A +L  
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M  +G+ P  + +N+++    +  +  K  ++L  M
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 188/398 (47%), Gaps = 5/398 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +++  G E       + +    R      A++L    +N    FGV  + D  +Y 
Sbjct: 110 GLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLN---TFGV--QADTAVYN 164

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +++ L +   +   + +  +M D+ I PDVVT N++I+  C A+    A  +  EM   
Sbjct: 165 HLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH 224

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V P+  TF+ +M    + G +E A ++   M++ G  P     N L++G+C  GRV  A
Sbjct: 225 AVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDA 284

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
                   + G + +  +Y+  ++  C+N  +  AL +   ML +G  P V TYNT+   
Sbjct: 285 LGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 344

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  +++ A  + ++M   G   DT  + T I  LC    + EAL+L R L +     D
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++ LI+ LCK G   +   LF  +       D VTYNI+I  LC+ GK+  A DL  
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +ME+ G     V +NT++    +     +  E+  +MD
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 7/247 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++++ GC  + +TY+T+I+ LC+      A  +F++M + +G         AV 
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM-DAHG-----ISRSAVT 512

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+IDGLCK   +D A EL+ QM  + + P  +TYNS++  +C   D  +A  +   M 
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G + +VVT+  +++ LCK G+ + A +LL  M   G+RP    YN ++        + 
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            A  LF  M  +G   +  +Y I+  G C+    I+ A     EM++KG  P   ++  L
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 692

Query: 242 FIGLFEI 248
             GL  +
Sbjct: 693 AEGLLNL 699



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 1/278 (0%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+   +  I+ +L   G  +    L+  M + G    A V  + ++ +    R + A +L
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146

Query: 188 FVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
             + + + G + +   Y+ L+N   +   ++   S+Y+EM  +GI+P VVT NTL   L 
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
             HQV  A  + +EM  H VA D   + T + G  + G I  AL +   +    C     
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           + + LI+G CK GR++ A              D VTYN  +H LC +G +  A  +   M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +G  PD   +NT++    +N E  +   ++++M +R
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 364



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +AA +   + A G E +V+TY TLINGLC+ G T VAL L   M I G        +P  
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG-------IRPTP 615

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFI 119
             Y  +I  L +   +  A  L  +M +    PD +TY  V RG C       EA    +
Sbjct: 616 KAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLV 675

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           EM+++G  P   +F ++ + L   G  +     +EL+I+
Sbjct: 676 EMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 714



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 2/200 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L+    +  + E AL + +  L++    P+   Y  +   L      +    L  EM+R 
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRT-LRILKCELDIRSYSCLIDGLCKSGRLKI 323
           G  A     R+F++   +     +A++L R  L     + D   Y+ L++ L +  R+K+
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
              +++ +    +  DVVT N +I ALC   ++  A  +  +M +  VAPD   F TLM 
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 384 GCIRNNETSKVVELLHRMDE 403
           G I        + +  +M E
Sbjct: 239 GFIEEGSIEAALRVKTKMME 258


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 215/403 (53%), Gaps = 36/403 (8%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING--------NGEFGVVCK------ 57
           A G EP+V+ ++ +I  LC +G+   AL  F+E+ +         N     +CK      
Sbjct: 213 ARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEE 272

Query: 58  --------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKD---KNINPDVVTYNS 100
                         P    YT+++DG  K G +D+A   LLQ+K+   +   PD VTY S
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA---LLQLKEAVERGFIPDAVTYTS 329

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           +I G C      E    F EM ++G +P+ VT++ ++D   K   + +A ++   M+Q G
Sbjct: 330 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
              +   YN ++DG C  GRV  A   F++ME  GC   V +YS L++G+C    +  A+
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+  ML +G +P +V+YN +  GL    ++ +A+  F+++ +  +  D + + +F+ GL
Sbjct: 450 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGL 509

Query: 281 CKN-GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           C+    + + +ELF ++       ++ SYS L+DG+C++G L++  E+FH +    +  D
Sbjct: 510 CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPD 569

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           VV +N +I  LC  G++D+A ++F ++E +  APD  ++ +L+
Sbjct: 570 VVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLL 611



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 207/409 (50%), Gaps = 13/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  +    GCEP+ +TY+  I+GLC+      A  L ++M          C P  V
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK------CLPTTV 112

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGL K G +D+A  +L QM +K  +P + TY  VI G   A    EA+R+F++M
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ----IGVRPNAFVYNTLMDGFCL 177
           +  G +P+   ++ ++  L K GK++EA   L  M++     GV P+  ++N ++   C 
Sbjct: 173 LGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 178 TGRVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           +G +  A   F  + +S+   H  F+++ L+   CK +  E A++   +M  +   PT+ 
Sbjct: 233 SGNLEDALAYFDELDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY +L  G  ++ +++ A     E    G   D   Y + IDGLCK G + E  E F  +
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           R    E D  +Y+ LIDG  K+  +  A  ++  + +   +   VTYNI++  LC  G++
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +A+  FL ME +G     V ++ LM G       S  VEL  RM +R 
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 218/445 (48%), Gaps = 49/445 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A+  ++   G  P + TY+ +I+GL + G    A  +F +M+ GNG     C+PDA 
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML-GNG-----CRPDAF 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD----KNINPDVVTYNSVIR-------------- 103
           +YT +I GL K G +D+A   L QM +    + + PDVV +N VIR              
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 104 --------------------GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
                                 C A  + EA     +M ++   P + T++ ++D   K 
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           G+++EA   L+  ++ G  P+A  Y +++DG C  GRV    E F  M + G + +  +Y
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+G+ K K I  A  +Y +ML  G   + VTYN +  GL +  +V  A+  F  M+ 
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G  A    Y   +DG C  G +  A+ELFR +    CE ++ SY+ +I GLC++G+L  
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD---LFLDMEAKGVAPDCVAFNT 380
           A+  F  L +  L  DV T+N  +H LC   ++D   D   LF  M ++G +P+  +++ 
Sbjct: 483 AYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYSI 540

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           LM G  R       +E+ H M  R 
Sbjct: 541 LMDGICRAGGLEVTLEIFHEMVSRG 565



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 203/384 (52%), Gaps = 20/384 (5%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           + L+NGLC+TG    A+ L +EM          C PD V +T +I+GLC+E  +D+A  +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEM---------PCSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
           L +       PD VTYN  I G C A   ++A +L  +M ++   P  VT++ ++D L K
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            G+++EA  +LE M++ G  P    Y  ++DG    GRV  A+ +FV M   GC+ + F 
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 203 YSILINGYCKNKEIEGALSLYSEML----SKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           Y+ LI+G  K  +++ AL   ++M+    ++G++P VV +N +   L     +E A   F
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           DE+    +    + +   +  LCK     EA+   + +   +C   + +Y+ L+DG  K 
Sbjct: 244 DELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 319 GRLKIA-WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           GRL  A  +L  ++ RG  I D VTY  +I  LC  G++++  + F +M  +G  PD V 
Sbjct: 303 GRLDEALLQLKEAVERG-FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +  L+ G ++    +K++   HR+
Sbjct: 362 YAALIDGFMK----AKMIPKAHRV 381



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 8/301 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E    F +++  G EP+ +TY+ LI+G  +      A  ++ +M+      G V     V
Sbjct: 342 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQS----GTVVS--TV 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+DGLCK G V +A    L M+++     VVTY++++ GFC   + + A  LF  M
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT-GR 180
           +D+G +PN+V++++I+  LC+ GK+ +A    E ++Q  + P+ + +N+ + G C     
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V    ELF SM S G   N+ SYSIL++G C+   +E  L ++ EM+S+G+ P VV +NT
Sbjct: 516 VGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L    +V+ A ++F E++R   A D W+Y + +D L +   + EA  L   +++  
Sbjct: 576 LIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQG 634

Query: 301 C 301
           C
Sbjct: 635 C 635



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 125/233 (53%), Gaps = 8/233 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A F  ++  GC   V+TYS L++G C  G+   A+ LF  M++        C+P+ V
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG------CEPNLV 465

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIE 120
            Y  II GLC+ G + KA     ++  + + PDV T+NS + G C   D+  +   LF  
Sbjct: 466 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFES 525

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ QG  PN+ ++S++MD +C+ G +E   ++   M+  GV P+  V+NTL+   C+ GR
Sbjct: 526 MVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGR 585

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           V+ A E+F  +E      + +SY  L++   + + +E A  L   M  +G  P
Sbjct: 586 VDEALEVFRELERRSAP-DAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 3/200 (1%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L+NG CK  +++ A+ L  EM      P +V +  +  GL    +++ AF + +   R
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G   D   Y  FIDGLCK   + +A +L + +   KC     +Y+ L+DGL K+GRL  
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A  +   +        + TY ++I  L   G++++A  +F+DM   G  PD   +  L+ 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 384 GCIRNNETSKVVELLHRMDE 403
           G  +  +  + +  L++M E
Sbjct: 190 GLAKIGKLDEALVYLNQMVE 209



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           DT      ++GLCK G +  A+ L   L  + C  D+ +++ +I+GLC+  RL  A+ + 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
               R     D VTYN+ I  LC   ++D A  L   M+ K   P  V +  L+ G ++ 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 389 NETSKVVELLHRMDERN 405
               + + +L +M E+ 
Sbjct: 125 GRLDEAMAILEQMVEKG 141



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D R  + L++GLCK+G+L  A  L   +P      D+V + ++I+ LC + ++D+A  +
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
                  G  PD V +N  + G  +        +LL +MDE+ 
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 106


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 213/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++A   +P+++TYS LI+GLC+ G    A+ L++EM      F  +  P++ 
Sbjct: 344 EALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC-----FNRIF-PNSF 397

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ I+ GLC++G +  A+     +   N+ PDV  YN +I G+    D  EA RL+  +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+ + P++VTF+ ++   CKN K+ EA +LLE +   G+ P+A  Y TLM+ +C  G +
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+  EL + M     +  V +Y+++I G CK +++E ++ L  +M +KG+ P  +TYNT+
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   + +AF+L D+M  H +      Y   IDGLC+ G + +A  +  +L+    
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L   +Y+ +I   C  G  + A ++FH +        +  Y+ +I+ LC    +++A  
Sbjct: 638 NLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKY 697

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            F  M + GV+PD   F  ++    R      V ELL  M
Sbjct: 698 YFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 206/404 (50%), Gaps = 5/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++  G +P+++TY  +  G    G    A  + ++M+   G      KPD V
Sbjct: 238 EALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG-----LKPDLV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G C+ G +++A  L   +       +V+ Y+ ++   C     +EA +L  EM
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               +QP++VT+S+++  LCK GK+++A QL + M    + PN+F ++ ++ G C  G +
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+  F S+     + +V  Y+I+I+GY K  ++E A+ LY  +  K I P++VT+N+L
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V  A +L + ++ HG+      Y T ++  C+ G I +  EL   + +   
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +Y+ +I GLCK  +L+ + +L   +    L  D +TYN +I   C    M KA +
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  DM    + P    +N L+ G  R  +      +L  + +RN
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN 636



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 200/391 (51%), Gaps = 6/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+++TY+ LI G C+ G+   AL L  ++++   +  V+      +Y+ ++  LCK 
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVI------LYSVLLSSLCKR 339

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD+A +LL +M+  N+ PD+VTY+ +I G C      +A +L+ EM    + PN    
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S I+  LC+ G + +A    + +I   +RP+  +YN ++DG+   G V  A  L+  +  
Sbjct: 400 SGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRD 459

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                ++ +++ LI G+CKN+++  A  L   +   G++P+ VTY TL     E   + +
Sbjct: 460 KAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK 519

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             +L  EM    +      Y   I GLCK   + E+++L   +R      D  +Y+ +I 
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+  ++ A+EL   +    L     TYN++I  LC  G ++ A  + + ++ + +  
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             VA+ T++       +  + V++ H+M E+
Sbjct: 640 TKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 204/398 (51%), Gaps = 10/398 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K+K     P++ TY++L+  L    HT +  +++ + I  +G         A 
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYND-IKDSG-----TPQSAR 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + I+DGLC +     A   L Q   K   P VV++N+++  +C    ++ AK  F  M
Sbjct: 152 TSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMM 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+  ++++++  L   G MEEA +L   M + G++P+   Y  +  GF L G +
Sbjct: 212 LKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLM 271

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A+E+   M    G K ++ +Y++LI G+C+   IE AL L  ++LS G +  V+ Y+ 
Sbjct: 272 SGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSV 331

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  QV+ A +L  EM+ + +  D   Y   I GLCK G + +A++L++ +   +
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  ++S ++ GLC+ G L  A   F SL    L  DV  YNIMI      G +++A 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            L+  +  K + P  V FN+L+ G  +N +  +   LL
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +K  G EP+ +TY+TL+N  C  G+      L  EM   + E      P  
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE------PTV 536

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I GLCK+  ++++ +LL  M+ K + PD +TYN++I+ FC A D  +A  L  +
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   ++P   T++V++D LC+ G +E+A ++L  +    +      Y T++   C+ G 
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGD 656

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             RA ++F  M   G + ++  YS +IN  CK   I  A   +  MLS G+ P    +  
Sbjct: 657 AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEM 716

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +         V   F+L   M + G+  D
Sbjct: 717 MLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ +  AL +  +M  + ++P++ TYN+L   L+ +   +  + ++++++  G       
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
               +DGLC      +A+   R     +    + S++ ++   CK G   +A   F  + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +  ++ D  +YNI+IH L   G M++A +L  DME +G+ PD V +  +  G
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 205/381 (53%), Gaps = 14/381 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +F  +    C+P+V TY TL++GLC+      A++L +EM I+G       C P  
Sbjct: 187 DAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG-------CFPSP 239

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+GLCK+G + +  +L+  M  K   P+ VTYN++I G C      +A  L   
Sbjct: 240 VTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDR 299

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PNVVT+  I++ L K G+  + +++L LM + G   N +VY+ L+ G    G+
Sbjct: 300 MVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGK 359

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF  M    C+ N   YS +I+G C++ + + AL + SEM +   KP   TY++
Sbjct: 360 SQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSS 419

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G FE     +A +++ +M +H    +   Y   I GLCK+G + EA+ ++  +    
Sbjct: 420 LMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKG 479

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKM 356
           C+ D+ +Y  +I+GL  +G ++ A +L++ +    P      DVVTYNI+++ALC    +
Sbjct: 480 CKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ--PDVVTYNILLNALCKQSSI 537

Query: 357 DKAHDLFLDMEAKGVAPDCVA 377
            +A DL   M  +G  PD V 
Sbjct: 538 SRAIDLLNSMLDRGCDPDLVT 558



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 209/402 (51%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF ++   F C+  V ++++++N + + G    AL  +  +I   G  GV   P+ 
Sbjct: 113 KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVI---GAKGVNISPNV 169

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  +I  +CK G VD A ++   M      PDV TY +++ G C A+  +EA  L  E
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ VTF+V+++ LCK G +   ++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 230 MQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTYN 239
           + +A  L   M S  C  NV +Y  +ING  K  + ++GA  L + M  +G       Y+
Sbjct: 290 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL-ALMEERGYHVNEYVYS 348

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GLF+  + + A +LF EM       +T  Y   IDGLC++G   EALE+   +   
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C+ +  +YS L+ G  ++G    A E++  + +     + V Y+++IH LC DGK+ +A
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++  M  KG  PD VA+ +++ G          ++L + M
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEM 510



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 133/239 (55%), Gaps = 8/239 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++ A +   ++  G   N   YS LI+GL + G +  A+ LF+EM          C+ + 
Sbjct: 326 LDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKE------CELNT 379

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y+ +IDGLC++G  D+A E+L +M +    P+  TY+S+++GF  A + ++A  ++ +
Sbjct: 380 IVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKD 439

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       N V +SV++  LCK+GK++EA  +   M+  G +P+   Y ++++G    G 
Sbjct: 440 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGL 499

Query: 181 VNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           V  A +L+  M  +    + +V +Y+IL+N  CK   I  A+ L + ML +G  P +VT
Sbjct: 500 VEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 29/278 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++    CE N I YS +I+GLCR G    AL +  EM N        CKP+A 
Sbjct: 362 EAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR------CKPNAY 415

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++++ G  + G   KA E+   M   N   + V Y+ +I G C      EA  ++ +M
Sbjct: 416 TYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQM 475

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI--QIGVRPNAFVYNTLMDGFCLTG 179
           + +G +P+VV +  +++ L   G +E+A QL   M+  +   +P+   YN L++  C   
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSI---------------------LINGYCKNKEIEG 218
            ++RA +L  SM   GC  ++ +  I                     L+    K + + G
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLG 595

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           A  +   ML K + P   T+  +   L    +V+ A +
Sbjct: 596 ASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 207/411 (50%), Gaps = 18/411 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF + +   C PN  TY +LI+GLC+ G    A  L +EM     + G+   P   
Sbjct: 16  QAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM----RDRGI--PPGVA 66

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  +I GLCK G    A      +      PD++T+N ++     +    EA ++F E 
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ES 125

Query: 122 MDQGVQ--PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M    Q  PNVVT++ +++ LCK+GK++ A +LL+LM + G  PN   Y+ L++G C  G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R ++   L   M   G + +V  Y+ L+NG CK++ ++ AL L   M+  G  PTVVTYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L        QV+RAF+L   M   G   D   Y T I GLC++  + +A  L + +   
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAW------ELFHSLPRGVLIADVVTYNIMIHALCAD 353
           +C  D+ +YS +IDGLCK  R+   W      E+   + +     +  TY ++I  LC  
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            K  +A  L   M    V PD  +F+ ++    ++++     ++   M ER
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 227/444 (51%), Gaps = 45/444 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +    C P++IT++ L++ L ++G    A  +FE M   +      C P+ V
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVV 137

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+GLCK+G +D+A ELL  M +    P+V+TY+ ++ G C A  +++   L  EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QP+V+ ++ +++ LCK+ +++EA +L++LMI+ G  P    YN+LM+ FC + +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   M   GC  +V +Y+ +I G C++  ++ A +L  +M++    P V+TY+T+
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 242 FIGLFEIHQVERAFKL------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             GL +  +V+  +KL       + M++ G   +   Y   I+GLC+     +AL L R 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIA----------- 338
           +   +   D+ S+S +I  LCKS  L  A+++F  +      P  V  A           
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 339 -----------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
                             V TYN ++  LC  G++++A  +   M  K   PD  ++  L
Sbjct: 438 VDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R +   +  EL   ++ + 
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 205/386 (53%), Gaps = 13/386 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GC PNVITYS L+ GLC+ G T     L +EM     +      PD ++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIM 208

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+++GLCK   +D+A EL+  M      P VVTYNS++  FC +   + A RL   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  P+V+ ++ ++  LC++ ++++A  LL+ M+     P+   Y+T++DG C   RV+
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 183 R------AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
                  A E+   M+  GC  N  +Y+++I G C+ ++ + AL+L   M+   + P + 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +++ +   L + H ++ A+K+F  M       +  AY   IDGL K G + +A+ +F  L
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-L 447

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            +      + +Y+ ++DGLC  GR++ A  +   +       D  +Y  +I  LC    +
Sbjct: 448 MVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           ++A++LF  +EAKG A +   +N L+
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 210/409 (51%), Gaps = 13/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G  P V  ++ +I GLC+ G    AL  F+ +       G  C PD +
Sbjct: 48  QAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA------GTKCTPDII 101

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +  ++D L K G V++A ++   M       P+VVTY +VI G C     + A  L   
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G  PNV+T+SV+++ LCK G+ ++   LL+ M + G +P+  +YNTL++G C + R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A EL   M   GC   V +Y+ L+  +C++K+++ A  L   M  +G  P V+ YNT
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI------VEALELFR 294
           +  GL    +++ A  L  +M       D   Y T IDGLCK+  +        A E+  
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  +  +Y+ +I+GLC++ + + A  L   +    ++ D+ +++++I +LC   
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +D A+ +F  M  +   P+ VA+  L+ G  +  E  K V +   M E
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 179/336 (53%), Gaps = 13/336 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   GC P V+TY++L+   CR+     A  L + M     E G  C PD +
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM----SERG--CPPDVI 277

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--YANDSN---EAKR 116
            Y T+I GLC++  +D A+ LL QM      PDV+TY+++I G C  +  D++   EA  
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337

Query: 117 LFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
             +EMM Q G  PN  T++V+++ LC+  K ++A  LL  MI   V P+   ++ ++   
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +  ++ A ++F  M    CK N  +Y+ LI+G  K  E++ A+ ++ E++ +  +P V
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGV 456

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN++  GL  + ++E A ++ + M       D  +Y   I GLC+   + EA ELF+ 
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +      +++  Y+ L++ LCK  RL  A  + + L
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 8/233 (3%)

Query: 1   MEAAA-LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +EAA  +   +K  GC PN  TY+ +I GLCR   +  AL L   MI+      VV  PD
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PD 386

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              ++ +I  LCK   +D A ++   M ++   P+ V Y ++I G     + ++A R+F 
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF- 445

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+M +  +P V T++ ++D LC  G++EEA +++E MI     P+   Y  L+ G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            V  A ELF ++E+ G    V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 200/373 (53%), Gaps = 6/373 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  PNV+ Y+TLI+G C+ G       LF +M    GE  VV   +   YT +I+
Sbjct: 176 QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM----GELDVVA--NQYTYTVLIN 229

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G  K G      EL  +MK   I P+V TYNS+I   C     N A  LF EM ++GV  
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++ ++  LC+  ++ EA +L+  M + G+ PN   YNTL+DG+C  G +++A  LF
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 349

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M+S G   ++ +Y+ILI G+ + K   G   +  EM ++G+ P+ VTY  L   L   
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             +E+AF+++  M++ G+ AD + Y   I GLC  G + EA +LF++L  +  + +   Y
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +I G CK G    A  L   +    ++ +V +YN  I  LC D K  +A  L  DM  
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIE 529

Query: 369 KGVAPDCVAFNTL 381
            G+ P    +N +
Sbjct: 530 LGLKPSISIWNMI 542



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 206/421 (48%), Gaps = 42/421 (9%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V+ +  +IN   R+     AL    +MI      G+V  P +  +  ++  L K  F +
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGR----GLV--PGSNTFNNLLILLIKSNFFE 134

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA  +  + K  N+  DV ++  +I+G C     ++   +  +M + G+ PNVV ++ ++
Sbjct: 135 KAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 193

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  CKNG +E   QL   M ++ V  N + Y  L++GF   G      EL+  M+  G  
Sbjct: 194 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 253

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV++Y+ +I   C + ++  A  L+ EM  +G+   VVTYNTL  GL +  +V  A +L
Sbjct: 254 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 313

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR------------ILKC---- 301
              M+R G++ +  +Y T IDG C  G + +A  LF  ++            IL      
Sbjct: 314 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 373

Query: 302 ------------ELDIR-------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
                       E++ R       +Y+ L+D L +S  ++ A++++ S+ +  L+AD+  
Sbjct: 374 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 433

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           Y ++IH LC  G M +A  LF  ++   + P+ V +NT++ G  +   + + + LL  M 
Sbjct: 434 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMG 493

Query: 403 E 403
           E
Sbjct: 494 E 494



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 154/291 (52%), Gaps = 6/291 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+ K+K  G  PNV TY+++I   C  G    A  LF+EM     E GV C  + V Y T
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM----RERGVAC--NVVTYNT 296

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLC+E  V +A+ L+ +MK   ++P++++YN++I G+C   + ++A  LF +M   G
Sbjct: 297 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 356

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P++ T+++++    +       + ++  M   G+ P+   Y  LMD    +  + +A 
Sbjct: 357 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 416

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++ SME  G   +++ Y +LI+G C   +++ A  L+  +    +KP  V YNT+  G 
Sbjct: 417 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 476

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            +     RA +L  EM  +G+  +  +Y + I  LCK+    EA  L + +
Sbjct: 477 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +++  G   NV+TY+TLI GLC+    + A  L   M            P+ + 
Sbjct: 275 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLIS 328

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C  G +DKA  L  QMK    +P + TYN +I GF  A +S     +  EM 
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 388

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ VT++++MD L ++  +E+A Q+   M + G+  + ++Y  L+ G C+ G + 
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            A +LF S++ M  K N   Y+ +I GYCK      AL L  EM   G+ P V +YN+
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 1/310 (0%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           V+ + ++I     +    +A     +M+ +G+ P   TF+ ++  L K+   E+A ++  
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
              +  V+ + + +  ++ G C  G +++  E+   ME MG   NV  Y+ LI+G CKN 
Sbjct: 142 -ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +IE    L+ +M    +     TY  L  G F++   +   +L+++M+  G+  + + Y 
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + I   C +G +  A ELF  +R      ++ +Y+ LI GLC+  R+  A  L   + R 
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  ++++YN +I   C+ G +DKA  LF  M++ G +P    +N L+ G      ++ V
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 380

Query: 395 VELLHRMDER 404
            +++  M+ R
Sbjct: 381 TDMVREMEAR 390


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 208/387 (53%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+T++ +++   R G    A+ L + M++         KP  V Y +++ GLC+ G  
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG------LKPGIVTYNSVLKGLCRSGMW 181

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DKA E+  +M D  + PDV ++  +I GFC   +  EA +++ EM  +G++P++V+FS +
Sbjct: 182 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 241

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    + GKM+ A   L  M   G+ P+  +Y  ++ GFC  G ++ A  +   M   GC
Sbjct: 242 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 301

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK + +  A  L +EM  +G+ P + T+ TL  G     ++++A +
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LFD M    +  D   Y T IDG+C+ G + +A +L+  +   +   +  +YS LID  C
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G+++ A+     +    ++ +++TYN +I   C  G + K       M    V+PD +
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            +NTL+ G I+ ++     +LL+ M++
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEK 508



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 221/403 (54%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++  FG  P+V +++ LI G CR G    AL +++EM +         KPD V
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLV 236

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I    + G +D A   L +M+   + PD V Y  VI GFC A   ++A R+  EM
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++ +++ LCK  ++ +A  LL  M + GV P+   + TL+ G+C+ G++
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +LF +M +   + ++ +Y+ LI+G C+  +++ A  L+ +M S+ I P  VTY+ L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  QVE AF   DEM   G+  +   Y + I G C++G + +  +  + + + K 
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI G  K  ++  A++L + + +  +  DVVTYN++I+     G + +A  
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M AKG+ PD   + +++ G +    + +  +L   M +R
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 193/369 (52%), Gaps = 6/369 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ +++  G +P+++++S LI    R G    A+    EM      FG+V  PD V
Sbjct: 218 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC----FGLV--PDGV 271

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C+ G +  A  +  +M      PDVVTYN+++ G C      +A+ L  EM
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV P++ TF+ ++   C  GK+++A QL + M+   +RP+   YNTL+DG C  G +
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +L+  M S     N  +YSILI+ +C+  ++E A     EM++KGI P ++TYN++
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V +  K   +M  + V+ D   Y T I G  K   + +A +L   +   K 
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 511

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ LI+G    G ++ A  +F  +    +  D  TY  MI+     G   +A  
Sbjct: 512 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 571

Query: 362 LFLDMEAKG 370
           L  +M  +G
Sbjct: 572 LHDEMLQRG 580



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 174/316 (55%), Gaps = 4/316 (1%)

Query: 92  NPDVVTY--NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N +V TY  N ++  +C A + ++   +  EM  + V P+VVT +V++D   + G  E A
Sbjct: 90  NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             L++ M+  G++P    YN+++ G C +G  ++A E+F  M+  G   +V S++ILI G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAA 268
           +C+  EIE AL +Y EM  +GIKP +V+++ L IGLF    +++ A     EM+  G+  
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y   I G C+ G + +AL +   +    C  D+ +Y+ L++GLCK  RL  A  L 
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           + +    +  D+ T+  +IH  C +GK+DKA  LF  M  + + PD V +NTL+ G  R 
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388

Query: 389 NETSKVVELLHRMDER 404
            +  K  +L   M  R
Sbjct: 389 GDLDKANDLWDDMHSR 404



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G   +A + +  + + N E       +      ++   CK    DK   ++ +M+ + 
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 125

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PDVVT+N ++     A D+  A  L   M+ +G++P +VT++ ++  LC++G  ++A 
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 185

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M   GV P+   +  L+ GFC  G +  A +++  M   G K ++ S+S LI  +
Sbjct: 186 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 245

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A++   EM   G+ P  V Y  +  G      +  A ++ DEM   G   D 
Sbjct: 246 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 305

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T ++GLCK   +++A  L   +R      D+ +++ LI G C  G+L  A +LF +
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +    L  D+VTYN +I  +C  G +DKA+DL+ DM ++ + P+ V ++ L+
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 417



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 150/265 (56%), Gaps = 6/265 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  +++  G  P++ T++TLI+G C  G    AL LF+ M+N         +PD 
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDI 375

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+IDG+C++G +DKA +L   M  + I P+ VTY+ +I   C      +A     E
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PN++T++ I+   C++G + +  + L+ M+   V P+   YNTL+ G+    +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +L   ME    + +V +Y++LING+  +  ++ A  ++ +M +KGI+P   TY +
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG 265
           +  G       + AF+L DEM + G
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 153/325 (47%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +E++  +   +  P    ++ +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G    A+    L+       N +  N ++  +C     ++   +   ME      +
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V +++++++   +  + E A++L   M+SKG+KP +VTYN++  GL      ++A+++F 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EM   GVA D  ++   I G C+ G I EAL++++ +R    + D+ S+SCLI    + G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           ++  A      +    L+ D V Y ++I   C  G M  A  +  +M   G  PD V +N
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 309

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  +         LL+ M ER
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRER 334


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 221/403 (54%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++  FG  P+V +++ LI G CR G    AL +++EM +         KPD V
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLV 297

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I    + G +D A   L +M+   + PD V Y  VI GFC A   ++A R+  EM
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++ +++ LCK  ++ +A  LL  M + GV P+   + TL+ G+C+ G++
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +LF +M +   + ++ +Y+ LI+G C+  +++ A  L+ +M S+ I P  VTY+ L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  QVE AF   DEM   G+  +   Y + I G C++G + +  +  + + + K 
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI G  K  ++  A++L + + +  +  DVVTYN++I+     G + +A  
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M AKG+ PD   + +++ G +    + +  +L   M +R
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 208/387 (53%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+T++ +++   R G    A+ L + M++         KP  V Y +++ GLC+ G  
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG------LKPGIVTYNSVLKGLCRSGMW 242

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DKA E+  +M D  + PDV ++  +I GFC   +  EA +++ EM  +G++P++V+FS +
Sbjct: 243 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 302

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    + GKM+ A   L  M   G+ P+  +Y  ++ GFC  G ++ A  +   M   GC
Sbjct: 303 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 362

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK + +  A  L +EM  +G+ P + T+ TL  G     ++++A +
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LFD M    +  D   Y T IDG+C+ G + +A +L+  +   +   +  +YS LID  C
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G+++ A+     +    ++ +++TYN +I   C  G + K       M    V+PD +
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            +NTL+ G I+ ++     +LL+ M++
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEK 569



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 196/373 (52%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ +++  G +P+++++S LI    R G    A+    EM      FG+V  PD V
Sbjct: 279 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC----FGLV--PDGV 332

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C+ G +  A  +  +M      PDVVTYN+++ G C      +A+ L  EM
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV P++ TF+ ++   C  GK+++A QL + M+   +RP+   YNTL+DG C  G +
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +L+  M S     N  +YSILI+ +C+  ++E A     EM++KGI P ++TYN++
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V +  K   +M  + V+ D   Y T I G  K   + +A +L   +   K 
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ LI+G    G ++ A  +F  +    +  D  TY  MI+     G   +A  
Sbjct: 573 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 632

Query: 362 LFLDMEAKGVAPD 374
           L  +M  +G APD
Sbjct: 633 LHDEMLQRGFAPD 645



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 174/316 (55%), Gaps = 4/316 (1%)

Query: 92  NPDVVTY--NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N +V TY  N ++  +C A + ++   +  EM  + V P+VVT +V++D   + G  E A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
             L++ M+  G++P    YN+++ G C +G  ++A E+F  M+  G   +V S++ILI G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAA 268
           +C+  EIE AL +Y EM  +GIKP +V+++ L IGLF    +++ A     EM+  G+  
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y   I G C+ G + +AL +   +    C  D+ +Y+ L++GLCK  RL  A  L 
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           + +    +  D+ T+  +IH  C +GK+DKA  LF  M  + + PD V +NTL+ G  R 
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449

Query: 389 NETSKVVELLHRMDER 404
            +  K  +L   M  R
Sbjct: 450 GDLDKANDLWDDMHSR 465



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R G   +A + +  + + N E       +      ++   CK    DK   ++ +M+ + 
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 186

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PDVVT+N ++     A D+  A  L   M+ +G++P +VT++ ++  LC++G  ++A 
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 246

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M   GV P+   +  L+ GFC  G +  A +++  M   G K ++ S+S LI  +
Sbjct: 247 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 306

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A++   EM   G+ P  V Y  +  G      +  A ++ DEM   G   D 
Sbjct: 307 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 366

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T ++GLCK   +++A  L   +R      D+ +++ LI G C  G+L  A +LF +
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +    L  D+VTYN +I  +C  G +DKA+DL+ DM ++ + P+ V ++ L+
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 478



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 152/269 (56%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  +++  G  P++ T++TLI+G C  G    AL LF+ M+N         +PD 
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDI 436

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+IDG+C++G +DKA +L   M  + I P+ VTY+ +I   C      +A     E
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PN++T++ I+   C++G + +  + L+ M+   V P+   YNTL+ G+    +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +L   ME    + +V +Y++LING+  +  ++ A  ++ +M +KGI+P   TY +
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G       + AF+L DEM + G A D
Sbjct: 617 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 153/325 (47%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +E++  +   +  P    ++ +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G    A+    L+       N +  N ++  +C     ++   +   ME      +
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V +++++++   +  + E A++L   M+SKG+KP +VTYN++  GL      ++A+++F 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EM   GVA D  ++   I G C+ G I EAL++++ +R    + D+ S+SCLI    + G
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 310

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           ++  A      +    L+ D V Y ++I   C  G M  A  +  +M   G  PD V +N
Sbjct: 311 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 370

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  +         LL+ M ER
Sbjct: 371 TLLNGLCKERRLLDAEGLLNEMRER 395


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 191/340 (56%), Gaps = 9/340 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+T+  +INGLC+ G    A ++ E+M      +G    P  + Y TIIDG CK G + 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDM----KAWGF--SPSVITYNTIIDGYCKAGKMF 281

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA  LL +M  K I+P+ +T+N +I GFC   +   AK++F EM  QG+QPNVVT++ ++
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LC NGK++EA  L + M  +G++PN   YN L++GFC    +  A+E+   +   G  
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +++ LI+ Y K   ++ A  L S ML  G+ P V TYN L +G      V+ A KL
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE---LDIRSYSCLIDG 314
             EM+ +G+ AD   Y   +D LCK G   +A+ L   + +++ +    +I +Y+ LI G
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKG 521

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            C  G+L+ A  L + +    LI +  TY+I+   +   G
Sbjct: 522 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 205/376 (54%), Gaps = 16/376 (4%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +L A  C P +++       L + G   V  ++++EMI      GV    + V +  +I+
Sbjct: 191 RLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRR--RIGV----NVVTFDVVIN 237

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLCK G   KA +++  MK    +P V+TYN++I G+C A    +A  L  EM+ + + P
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N +TF++++D  C++  +  A ++ E M + G++PN   YN+L++G C  G+++ A  L 
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M  MG K NV +Y+ LING+CK K ++ A  +  ++  +G+ P V+T+NTL     + 
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +++ AF L   M   GV  +   Y   I G C+ G + EA +L + +     + D+ +Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477

Query: 309 SCLIDGLCKSGRLKIAWELFHSLP---RGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
           + L+D LCK G  + A  L   +    +    A++VTYN++I   C  GK+++A+ L  +
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 537

Query: 366 MEAKGVAPDCVAFNTL 381
           M  KG+ P+   ++ L
Sbjct: 538 MLEKGLIPNRTTYDIL 553



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 207/398 (52%), Gaps = 10/398 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L ++GC  N I    L+    + G   +AL  F+      G++G   +  A+    ++  
Sbjct: 151 LGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRA----GDYGF--RLSALSCNPMLVS 203

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L KEG +   + +  +M  + I  +VVT++ VI G C      +A  +  +M   G  P+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+T++ I+D  CK GKM +A  LL+ M+   + PN   +N L+DGFC    V  AK++F 
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M+  G + NV +Y+ LING C N +++ AL L  +M   G+KP VVTYN L  G  +  
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            ++ A ++ D++ + G+A +   + T ID   K G + +A  L   +       ++ +Y+
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD---M 366
           CLI G C+ G +K A +L   +    L AD+VTYNI++ ALC  G+  KA  L  +   M
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM 503

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           E KG   + V +N L+ G     +  +   LL+ M E+
Sbjct: 504 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 541



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 158/290 (54%), Gaps = 9/290 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++ A    PN IT++ LI+G CR  +   A  +FEEM           +P+ V
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG------LQPNVV 335

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC  G +D+A  L  +M    + P+VVTYN++I GFC      EA+ +  ++
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNV+TF+ ++D   K G+M++A  L  +M+  GV PN   YN L+ GFC  G V
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPTVVTY 238
             A++L   ME  G K ++ +Y+IL++  CK  E   A+ L  EM     KG +  +VTY
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           N L  G     ++E A +L +EM   G+  +   Y    D + + G+I +
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 163/298 (54%), Gaps = 9/298 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +KA+G  P+VITY+T+I+G C+ G    A  L +EM+           P+ +
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEI 300

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +IDG C++  V  AK++  +M+ + + P+VVTYNS+I G C     +EA  L  +M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVVT++ +++  CK   ++EA ++L+ + + G+ PN   +NTL+D +   GR+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   NV +Y+ LI G+C+   ++ A  L  EM   G+K  +VTYN L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 242 FIGLFEIHQVERAFKLFDE---MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
              L +  +  +A +L DE   M++ G  A+   Y   I G C  G + EA  L   +
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 199/374 (53%), Gaps = 6/374 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F+ +   G  P++I++S+LI    R GH   AL  F +M       G+V  PD 
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS----GLV--PDN 360

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +I+G C+ G + +A E+  +M ++    DVV YN+++ G C      +A  LF E
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++GV P+  TF+ ++   CK G M +A  L  +M Q  ++P+   YN L+DGFC T  
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A EL+  M S     N  SY+IL+NGYC    +  A  L+ EM+ KGIKPT+VT NT
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G      + +A +   +M   GV  D+  Y T I+G  K  Y+ +A  L   +    
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D+ +Y+ +++G C+ GR++ A  +   +    +  D  TY  +I+   +   + +A 
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAF 660

Query: 361 DLFLDMEAKGVAPD 374
               +M  +G  PD
Sbjct: 661 RFHDEMLQRGFVPD 674



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G E NV T + ++N LC+  H I  +  F   +   G F      D V 
Sbjct: 169 AWEVYNEIARSGIELNVYTLNIMVNALCKD-HKIDDVKPFLIDMEQKGIFA-----DIVT 222

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+  C+EG + +A E++  M  K + P + TYN+VI G C       AK +F EM+
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEML 282

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T++ ++ E C+N    EA  +   M+  GV P+   +++L+      G ++
Sbjct: 283 SIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLD 342

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A   F  M++ G   +   Y+ILINGYC+N  +  AL +  +ML +G    VV YNT+ 
Sbjct: 343 QALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL 402

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A  LFDEM   GV  D   + T I G CK G + +AL LF  +     +
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +Y+ LIDG CK+  ++ A EL++ +    +  + ++Y I+++  C  G + +A  L
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +M  KG+ P  V  NT++ G  R+ + SK  E L +M
Sbjct: 523 WDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM 561



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 207/391 (52%), Gaps = 6/391 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   +++TY+TLIN  CR G    A  +   M +G G      KP    Y  +I+GLCK+
Sbjct: 215 GIFADIVTYNTLINAYCREGLLGEAFEVMNSM-SGKG-----LKPTLFTYNAVINGLCKK 268

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +AK +  +M    ++PD  TYN+++   C  N+  EAK +F +M+ +GV P++++F
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++    +NG +++A      M   G+ P+  +Y  L++G+C  G ++ A E+   M  
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  +V +Y+ ++NG CK K +  A +L+ EM+ +G+ P   T+ TL  G  +   + +
Sbjct: 389 QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK 448

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF  M +  +  D   Y   IDG CK   + +A EL+  +   K   +  SY+ L++
Sbjct: 449 ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G +  A+ L+  + R  +   +VT N +I   C  G + KA +    M ++GV P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D + +NTL+ G ++     K   L+++M+ +
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETK 599



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +F ++ + G  P+  TY+TL+   CR  + + A ++F +M++     GV   PD 
Sbjct: 272 VRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR----GV--SPDL 325

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + ++++I    + G +D+A      MK   + PD V Y  +I G+C     +EA  +  +
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++QG   +VV ++ I++ LCK   + +A+ L + M++ GV P+   + TL+ G C  G 
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  LF  M     K ++ +Y+ILI+G+CK  E+E A  L++EM+S+ I P  ++Y  
Sbjct: 446 MGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAI 505

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  V  AF+L+DEM R G+        T I G C++G + +A E    +    
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LI+G  K   +  A+ L + +    L  DVVTYN++++  C  G+M +A 
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  +G+ PD   + TL+ G +  +   +       M +R
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G +P + TY+ +INGLC+ G  + A  +F EM++      +   PD  
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS------IGLSPDTT 291

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++   C+     +AK++   M  + ++PD+++++S+I         ++A   F +M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+ V ++++++  C+NG M EA ++ + M++ G   +   YNT+++G C    +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   +  +++ LI+G+CK   +  ALSL+  M  K IKP +VTYN L
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++E+A +L++EM    +  +  +Y   ++G C  G++ EA  L+  +     
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + + + +I G C+SG L  A E    +    +  D +TYN +I+       MDKA  
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME KG+ PD V +N ++ G  R     +   +L +M ER
Sbjct: 592 LINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIER 634



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 35/385 (9%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
            C  D +++  +I    +   +++  +    ++ K     +   NS++ G       + A
Sbjct: 110 TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLA 169

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             ++ E+   G++ NV T +++++ LCK+ K+++    L  M Q G+  +   YNTL++ 
Sbjct: 170 WEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINA 229

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  G +  A E+  SM   G K  +F+Y+ +ING CK      A  +++EMLS G+ P 
Sbjct: 230 YCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPD 289

Query: 235 VVTYNTLFI------------GLFE--IHQ---------------------VERAFKLFD 259
             TYNTL +             +F   +H+                     +++A   F 
Sbjct: 290 TTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFR 349

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M+  G+  D   Y   I+G C+NG + EALE+   +    C LD+ +Y+ +++GLCK  
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKK 409

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            L  A  LF  +    ++ D  T+  +IH  C +G M KA  LF  M  K + PD V +N
Sbjct: 410 LLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYN 469

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
            L+ G  +  E  K  EL + M  R
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISR 494



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E  +SM S  C  +   + +LI  Y + +++      +  +  KG   ++   N+L  GL
Sbjct: 102 ESLISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGL 160

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++  V+ A+++++E+ R G+  + +     ++ LCK+  I +       +       DI
Sbjct: 161 VKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADI 220

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI+  C+ G L  A+E+ +S+    L   + TYN +I+ LC  G+  +A  +F +
Sbjct: 221 VTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNN---ETSKVV-ELLHR 400
           M + G++PD   +NTL++   RNN   E   +  ++LHR
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHR 319


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 207/411 (50%), Gaps = 18/411 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF + +   C PN  TY +LI+GLC+ G    A  L +EM     + G+   P   
Sbjct: 16  QAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM----RDRGI--PPGVA 66

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  +I GLCK G    A      +      PD++T+N ++     +    EA ++F E 
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ES 125

Query: 122 MDQGVQ--PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M    Q  PNVVT++ +++ LCK+GK++ A +LL+LM + G  PN   Y+ L++G C  G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R ++   L   M   G + +V  Y+ L+NG CK++ ++ AL L   M+  G  PTVVTYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L        QV+RAF+L   M   G   D   Y T I GLC++  + +A  L + +   
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAW------ELFHSLPRGVLIADVVTYNIMIHALCAD 353
           +C  D+ +YS +IDGLCK  R+   W      E+   + +     +  TY ++I  LC  
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            K  +A  L   M    V PD  +F+ ++    ++++     ++   M ER
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 227/444 (51%), Gaps = 45/444 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +    C P++IT++ L++ L ++G    A  +FE M   +      C P+ V
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVV 137

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I+GLCK+G +D+A ELL  M +    P+V+TY+ ++ G C A  +++   L  EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QP+V+ ++ +++ LCK+ +++EA +L++LMI+ G  P    YN+LM+ FC + +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   M   GC  +V +Y+ +I G C++  ++ A +L  +M++    P V+TY+T+
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 242 FIGLFEIHQVERAFKL------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             GL +  +V+  +KL       + M++ G   +   Y   I+GLC+     +AL L R 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIA----------- 338
           +   +   D+ S+S +I  LCKS  L  A+++F  +      P  V  A           
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 339 -----------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
                             V TYN ++  LC  G++++A  +   M  K   PD  ++  L
Sbjct: 438 VDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R +   +  EL   ++ + 
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 205/386 (53%), Gaps = 13/386 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   GC PNVITYS L+ GLC+ G T     L +EM     +      PD ++
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIM 208

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+++GLCK   +D+A EL+  M      P VVTYNS++  FC +   + A RL   M 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  P+V+ ++ ++  LC++ ++++A  LL+ M+     P+   Y+T++DG C   RV+
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 183 R------AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
                  A E+   M+  GC  N  +Y+++I G C+ ++ + AL+L   M+   + P + 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +++ +   L + H ++ A+K+F  M       +  AY   IDGL K G + +A+ +F  L
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-L 447

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            +      + +Y+ ++DGLC  GR++ A  +   +       D  +Y  +I  LC    +
Sbjct: 448 MVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           ++A++LF  +EAKG A +   +N L+
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 210/409 (51%), Gaps = 13/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G  P V  ++ +I GLC+ G    AL  F+ +       G  C PD +
Sbjct: 48  QAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA------GTKCTPDII 101

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +  ++D L K G V++A ++   M       P+VVTY +VI G C     + A  L   
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G  PNV+T+SV+++ LCK G+ ++   LL+ M + G +P+  +YNTL++G C + R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A EL   M   GC   V +Y+ L+  +C++K+++ A  L   M  +G  P V+ YNT
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI------VEALELFR 294
           +  GL    +++ A  L  +M       D   Y T IDGLCK+  +        A E+  
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  +  +Y+ +I+GLC++ + + A  L   +    ++ D+ +++++I +LC   
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +D A+ +F  M  +   P+ VA+  L+ G  +  E  K V +   M E
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE 450



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 179/336 (53%), Gaps = 13/336 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   GC P V+TY++L+   CR+     A  L + M     E G  C PD +
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM----SERG--CPPDVI 277

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--YANDSN---EAKR 116
            Y T+I GLC++  +D A+ LL QM      PDV+TY+++I G C  +  D++   EA  
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337

Query: 117 LFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
             +EMM Q G  PN  T++V+++ LC+  K ++A  LL  MI   V P+   ++ ++   
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +  ++ A ++F  M    CK N  +Y+ LI+G  K  E++ A+ ++ E++ +  +P V
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGV 456

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN++  GL  + ++E A ++ + M       D  +Y   I GLC+   + EA ELF+ 
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +      +++  Y+ L++ LCK  RL  A  + + L
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 8/233 (3%)

Query: 1   MEAAA-LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +EAA  +   +K  GC PN  TY+ +I GLCR   +  AL L   MI+      VV  PD
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PD 386

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              ++ +I  LCK   +D A ++   M ++   P+ V Y ++I G     + ++A R+F 
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF- 445

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+M +  +P V T++ ++D LC  G++EEA +++E MI     P+   Y  L+ G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            V  A ELF ++E+ G    V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/390 (34%), Positives = 212/390 (54%), Gaps = 14/390 (3%)

Query: 2   EAAALFTKLKAFG--CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EAA L   +   G  C PNV++Y+T+I+G  + G    A  LF +M+    + G+   P+
Sbjct: 233 EAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKML----DHGI--PPN 286

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V   ++IDGLCK   +DKA+ +L QM D++I P+  TYNS+I G+  +    EA R+  
Sbjct: 287 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 346

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G +PNVVT+S+++D LCK+G   EA ++   MIQ G +PNA  Y +L+ G+   G
Sbjct: 347 EMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406

Query: 180 RV---NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            +   N  K+L V     G +     ++I I  YCK   ++ A   +++M  +G  P +V
Sbjct: 407 NLVDMNNVKDLMV---QNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIV 463

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            Y T+  GL +I +++ A   F +M   G++ D   + T I G   +G   +A ELF  +
Sbjct: 464 AYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++ +++ +ID L K G++  A +LF  +PR     +VV+YN MIH     G++
Sbjct: 524 MDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 583

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            +   L  DM   G+ P  V FNTL+ G +
Sbjct: 584 GEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 206/396 (52%), Gaps = 4/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P+V +Y+TL+ GLC       A  L   M     E G  C P+ V YTT
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM----AEDGDNCPPNVVSYTT 257

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  KEG V KA  L  +M D  I P+VVT NSVI G C     ++A+ +  +M+D+ 
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++     +G+  EA ++L+ M + G RPN   Y+ L+D  C +G    A+
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM   G K N  +Y  L++GY     +    ++   M+  G++P    +N      
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAY 437

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +++ A   F++MQ+ G   D  AY T IDGLCK G + +A+  F  +       DI
Sbjct: 438 CKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDI 497

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ LI G    G+ + A ELF+ +    +  +V T+N MI  L  +GK+ +A  LF  
Sbjct: 498 ITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDL 557

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M   G  P+ V++NT++ G     E  +V++LL  M
Sbjct: 558 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 593



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 206/402 (51%), Gaps = 11/402 (2%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           AAL   +K  G     +T++ L+  LC    T  A+N+   ++    E G  C PD   Y
Sbjct: 165 AALGQIIKT-GLRAQAVTFTPLLRTLCAEKRTSDAMNI---VLRRMPELG--CTPDVFSY 218

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           TT++ GLC E   ++A EL+  M +   N  P+VV+Y +VI GF    D  +A  LF +M
Sbjct: 219 TTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKM 278

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ PNVVT + ++D LCK   M++A  +L+ MI   + PN   YN+L+ G+  +G+ 
Sbjct: 279 LDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQW 338

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G + NV +YS+LI+  CK+     A  +++ M+  G KP   TY +L
Sbjct: 339 TEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSL 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     + D M ++G+      +   I   CK G + EA   F  ++    
Sbjct: 399 LHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGF 458

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ +IDGLCK GRL  A   F  +    L  D++T+N +IH     GK +KA +
Sbjct: 459 MPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEE 518

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN---NETSKVVELLHR 400
           LF +M  +G+ P+   FN+++    +     E  K+ +L+ R
Sbjct: 519 LFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPR 560



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 28/352 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G  PNV+TYS LI+ LC++G    A  +F  MI  +G+     KP+A 
Sbjct: 340 EAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ-SGQ-----KPNAS 393

Query: 62  IYTTIIDGLCKEG-FVD--KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            Y +++ G   EG  VD    K+L++Q     + P    +N  I  +C     +EA   F
Sbjct: 394 TYGSLLHGYATEGNLVDMNNVKDLMVQ---NGMRPGRHVFNIEIYAYCKCGRLDEASLTF 450

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M  QG  P++V ++ ++D LCK G++++A      MI  G+ P+   +NTL+ GF L 
Sbjct: 451 NKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALH 510

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+  +A+ELF  M   G   NV +++ +I+   K  ++  A  L+  M   G KP VV+Y
Sbjct: 511 GKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSY 570

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NT+  G F   +V    KL D+M   G+      + T +DG+   G              
Sbjct: 571 NTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGL------------- 617

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
              + D+ +   LID  C+ GR++    LF  +       D +T NI +  +
Sbjct: 618 ---KPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 41/406 (10%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           +A+++F  M     +      PD   +  +I   C  G ++     L Q+    +    V
Sbjct: 124 LAVSMFNRMARAGAK---KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAV 180

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           T+  ++R  C    +++A  + +  M + G  P+V +++ ++  LC   K EEA++L+ +
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240

Query: 156 MIQIG--VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           M + G    PN   Y T++ GF   G V +A  LF  M   G   NV + + +I+G CK 
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A ++  +M+ + I P   TYN+L  G     Q   A ++  EM R G   +   Y
Sbjct: 301 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 360

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL------------------ 315
              ID LCK+G   EA E+F ++     + +  +Y  L+ G                   
Sbjct: 361 SMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQ 420

Query: 316 -----------------CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                            CK GRL  A   F+ + +   + D+V Y  +I  LC  G++D 
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A   F  M   G++PD + FNTL+ G   + +  K  EL + M +R
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDR 526


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKL--KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EA+ L  ++  +  GC  N +TY+ +I+ L R GH   A  L + M        +  K  
Sbjct: 261 EASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-------RLSKKAS 313

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +  Y  +I  L + GFV K + L ++M+++ I P +VTYN++I G   +     A+  F 
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+++T++ +++  CK G ++EA  LL  + + G+ P    YNTL+DG+C  G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  A+ L   M   GC  +V +Y+IL+NG  K + +  A   + EMLSKG++P    YN
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T       +    +AF+L + M   G+  DT  Y   IDGLCK G + +A +L   +   
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D  +Y+CLI   C+ G L  A +L + +    L   VVTY I+IH  C  G +  A
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  F  M   G+ P+ + +N L+    R   T       H M ER
Sbjct: 614 YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 193/380 (50%), Gaps = 6/380 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL  +++  G  P ++TY+ +I+GL ++     A   F EM       G++  PD + Y 
Sbjct: 335 ALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM----RAMGLL--PDLITYN 388

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++++G CK G + +A  LL  ++   + P V+TYN++I G+C      EA+RL  EM++Q
Sbjct: 389 SMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQ 448

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+V T++++M+   K   +  A +  + M+  G++P+ F YNT +    + G  ++A
Sbjct: 449 GCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKA 508

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +L   M   G   +  +Y+++I+G CK   ++ A  L  +M+S G++P  +TY  L   
Sbjct: 509 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHA 568

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             E   +  A KL + M   G+      Y   I   C+ G +  A   FR +  +  E +
Sbjct: 569 HCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPN 628

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LI  LC++GR  +A+  FH +    L  +  TY ++I   C +G    A  L+ 
Sbjct: 629 EITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYF 688

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
           +M   G+ PD    N L  G
Sbjct: 689 EMHQNGIPPDYCTHNALFKG 708



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 6/316 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   L+  G  P V+TY+TLI+G CR G    A  L EEM+         C PD  
Sbjct: 402 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG------CFPDVC 455

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K   +  A+E   +M  K + PD   YN+ I       D+++A +L   M
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+ VT++VI+D LCK G +++A  L   M+  G++P+   Y  L+   C  G +
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L   M S G + +V +Y+ILI+  C+   +  A   + +ML  GI+P  +TYN L
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +   A+  F EM   G+A + + Y   IDG C+ G   +A+ L+  +     
Sbjct: 636 IHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695

Query: 302 ELDIRSYSCLIDGLCK 317
             D  +++ L  G  K
Sbjct: 696 PPDYCTHNALFKGFDK 711



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 29/277 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---------- 51
           EA  L  ++   GC P+V TY+ L+NG  +  +  +A   F+EM++   +          
Sbjct: 437 EARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI 496

Query: 52  -----FGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 G   K              PD V Y  IIDGLCK G +  AK+L ++M    + 
Sbjct: 497 CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +TY  +I   C     +EA++L   M+  G+QP+VVT+++++   C+ G +  A   
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGW 616

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M+ +G+ PN   YN L+   C TGR   A   F  M   G   N ++Y++LI+G C+
Sbjct: 617 FRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 A+ LY EM   GI P   T+N LF G  + H
Sbjct: 677 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGH 713



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 38/362 (10%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ--GVQPNVVTFS 134
           D  + +  +M    I P +VTYN+++  F      +EA  L  EM  Q  G   N VT++
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           V++  L + G +E A++L++ M ++  + ++F YN L+      G V + + L + ME+ 
Sbjct: 285 VVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENE 343

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G    + +Y+ +I+G  K++++E A   ++EM + G+ P ++TYN++  G  +   ++ A
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L  +++R G+A     Y T IDG C+ G + EA  L   +    C  D+ +Y+ L++G
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463

Query: 315 LCKSGRLKIAWELFHS-LPRGV----------------------------------LIAD 339
             K   L +A E F   L +G+                                  +  D
Sbjct: 464 SHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            VTYN++I  LC  G +  A DL + M + G+ PDC+ +  L+         S+  +LL+
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLN 583

Query: 400 RM 401
            M
Sbjct: 584 GM 585



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 3/309 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PDV   N V+R    A   ++ + ++ EM+   ++P +VT++ ++D   K G+ +EAS
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEAS 263

Query: 151 QLLELMIQI--GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            LL+ M     G   N   YN ++      G +  A +L  SM  +  K + F+Y+ LI 
Sbjct: 264 MLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLIT 322

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +   ++   +L  EM ++GI PT+VTYN +  GL +  QVE A   F EM+  G+  
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y + ++G CK G + EAL L   LR       + +Y+ LIDG C+ G L+ A  L 
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +       DV TY I+++       +  A + F +M +KG+ PDC A+NT +   +  
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502

Query: 389 NETSKVVEL 397
            +T K  +L
Sbjct: 503 GDTHKAFQL 511


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 11   KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
            +  GC PN +TY+ +I GL R G    A  L E M        +  K  +  Y  +I GL
Sbjct: 1148 RGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-------RLSKKASSFTYNPLITGL 1200

Query: 71   CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
               G V K  +L L+M+++ I P VVTYN++I G   +     A+  F EM   G+ P+V
Sbjct: 1201 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 1260

Query: 131  VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +T++ +++  CK G ++EA  L   + + G+ P    YN L+DG+C  G +  A+ L   
Sbjct: 1261 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEE 1320

Query: 191  MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
            M   GC  NV +Y+IL+ G    + +  A   + EMLSKG++P    YNT       +  
Sbjct: 1321 MGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 1380

Query: 251  VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            + RAF+L + +   G+++DT  Y   I GLCK G + +A EL   +     + D  +Y+C
Sbjct: 1381 IARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 1440

Query: 311  LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
            LI   C+ G L+ A ++F+++    L+   VT+ ++IHA C  G +  A+  F  M  +G
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 1500

Query: 371  VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V P+ + +N L+    R   T       H M ER
Sbjct: 1501 VEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 1534



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 197/387 (50%), Gaps = 8/387 (2%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIY 63
            A+  ++   G EP+++TY+TL++   + G       L +EM   G+G     C P+ V Y
Sbjct: 1105 AVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSG-----CLPNDVTY 1159

Query: 64   TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
              +I GL ++G +++A EL+  M+  +      TYN +I G        +   L +EM +
Sbjct: 1160 NVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMEN 1218

Query: 124  QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +G+ P VVT++ ++  L ++G +E A      M  +G+ P+   YN+L++G+C  G +  
Sbjct: 1219 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKE 1278

Query: 184  AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
            A  LF  +   G    V +Y+ILI+GYC+  ++E A  L  EM  +G  P V TY  L  
Sbjct: 1279 ALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 1338

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            G   +  +  A + FDEM   G+  D +AY T I      G I  A EL   L +     
Sbjct: 1339 GSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISS 1398

Query: 304  DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            D  +Y+ LI GLCK+G LK A EL   +    L  D +TY  +IHA C  G + +A  +F
Sbjct: 1399 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 1458

Query: 364  LDMEAKGVAPDCVAFNTLMLG-CIRNN 389
             +M + G+ P  V F  ++   C R N
Sbjct: 1459 NNMISDGLLPSAVTFTVIIHAYCRRGN 1485



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 185/371 (49%), Gaps = 6/371 (1%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            G  P V+TY+ +I+GL ++G    A   F EM       G++  PD + Y ++++G CK 
Sbjct: 1220 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM----RAMGLL--PDVITYNSLLNGYCKA 1273

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            G + +A  L   ++   + P V+TYN +I G+C   D  EA+ L  EM +QG  PNV T+
Sbjct: 1274 GNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 1333

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +++M        +  A +  + M+  G++P+ F YNT +    + G + RA EL   +  
Sbjct: 1334 TILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLML 1393

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             G   +  +Y+ILI+G CK   ++ A  L  +M+S G++P  +TY  L     E   +  
Sbjct: 1394 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 1453

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
            A K+F+ M   G+      +   I   C+ G +  A   FR +     E +  +Y+ LI 
Sbjct: 1454 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 314  GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             LC+ GR ++A   FH +    L+A+  TY ++I   C  G  + A   + +M   G+ P
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 1573

Query: 374  DCVAFNTLMLG 384
            D +    L+ G
Sbjct: 1574 DYLTHKALLKG 1584



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 118  FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            F EM   GV P+V   + ++  L    + ++   + E M+++G+ P+   YNTL+D F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 178  TGRVNRAKELFVSMESM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPT 234
             GR ++   L   ME+   GC  N  +Y+++I G  +  ++E A  L   M LSK  K +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 1189

Query: 235  VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
              TYN L  GL     V++ + L  EM+  G+      Y   I GL ++G +  A   F 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 295  TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             +R +    D+ +Y+ L++G CK+G LK A  LF  L R  L   V+TYNI+I   C  G
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 355  KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +++A  L  +M  +G  P+   +  LM G +     +   E    M
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 6/197 (3%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            G   + +TY+ LI+GLC+TG+   A  L  +M++ NG      +PD + YT +I   C+ 
Sbjct: 1395 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS-NG-----LQPDCITYTCLIHAHCER 1448

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            G + +A+++   M    + P  VT+  +I  +C   +   A   F +M+++GV+PN +T+
Sbjct: 1449 GLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 1508

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +V++  LC+ G+ + AS     M++ G+  N + Y  L+DG C  G    A   +  M  
Sbjct: 1509 NVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQ 1568

Query: 194  MGCKHNVFSYSILINGY 210
             G   +  ++  L+ G+
Sbjct: 1569 NGIHPDYLTHKALLKGF 1585



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 38/202 (18%)

Query: 220  LSLYSEMLSKG-----------------------------------IKPTVVTYNTLFIG 244
            LS + EM S G                                   I+P++VTYNTL   
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 245  LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
              +  + ++   L  EM+  G     +   Y   I GL + G + EA EL   +R+ K +
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 1187

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                +Y+ LI GL   G +K  ++L   +    ++  VVTYN MIH L   G ++ A   
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 363  FLDMEAKGVAPDCVAFNTLMLG 384
            F +M A G+ PD + +N+L+ G
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNG 1269



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A   F K+   G EPN ITY+ LI+ LCR G T +A + F EM+    E G+V   +   
Sbjct: 1489 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML----ERGLVA--NKYT 1542

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
            YT +IDG CK G  + A     +M    I+PD +T+ ++++GF
Sbjct: 1543 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  +F  + + G  P+ +T++ +I+  CR G+   A   F +M+    E GV  +P+ +
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML----EEGV--EPNEI 1506

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I  LC+ G    A     +M ++ +  +  TY  +I G C   +  +A R + EM
Sbjct: 1507 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM 1566

Query: 122  MDQGVQPNVVTFSVIM 137
               G+ P+ +T   ++
Sbjct: 1567 HQNGIHPDYLTHKALL 1582


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 209/412 (50%), Gaps = 29/412 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           +A  LF  ++  G  PNV+TY+ LI+GLC+ G+   A    E+M+               
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323

Query: 49  NG--------EFGVVCK--------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG        E   V K        P+ V+Y T+IDG CK G +  A  +   M  K IN
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+ VT NS+I+GFC      +A+ +  EM+ +G   N   F+ I+  LC N + E A + 
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M+   +RPN  +  TL+ G C  G+ + A EL+  +   G   N+ + + LI+G CK
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L  +ML +G     +TYNTL  G  +  +VE  FKL  EM + G+  DT+ 
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I G+C+ G + EA+ L+   +      ++ +Y  +IDG CK+ +++   +LF  L 
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              L  + V YN +I A C +G   +A  L  DM +KG+ P    +++L+ G
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 64/435 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEFGVVC------------ 56
           G  PN +T +++I G C+ G    A  + EEM++       G F  +             
Sbjct: 381 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 440

Query: 57  ------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                       +P+  + TT++ GLCKEG    A EL  ++ +K    ++VT N++I G
Sbjct: 441 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 500

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            C   +  EA RL  +M+++G   + +T++ ++   CK GK+EE  +L   M++ G+ P+
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            F YN L+ G C  G+++ A  L+   +S     NV++Y ++I+GYCK  +IE    L++
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620

Query: 225 EML-----------------------------------SKGIKPTVVTYNTLFIGLFEIH 249
           E+L                                   SKGI PT  TY++L  G+  I 
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 680

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++E A  L DEM++ G+  +   Y   I G CK G + + + + + +       +  +Y+
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 740

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +IDG  KSG +K A +L H +    ++ D VTYN++ +  C +GK+++   +   M  +
Sbjct: 741 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQE 800

Query: 370 GVAPDCVAFNTLMLG 384
           G+  D + + TL+ G
Sbjct: 801 GLPLDEITYTTLVHG 815



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 193/371 (52%), Gaps = 6/371 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V  +ST IN  C+ G    A+ LF +M     + GV   P+ V Y  +I GLCK 
Sbjct: 241 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM----EKLGV--SPNVVTYNNLIHGLCKH 294

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A     +M    +N  ++TY+ +I G       NEA  +  E +++G  PN V +
Sbjct: 295 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 354

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK G + +A ++   M+  G+ PN+   N+++ GFC  G++ +A+ +   M S
Sbjct: 355 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 414

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C N   E AL    EML + ++P      TL  GL +  +   
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 474

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G  A+       I GLCK G + EA+ L + +      LD  +Y+ LI 
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G+++  ++L   + +  +  D  TYN++IH +C  GK+D+A +L+ + +++ + P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594

Query: 374 DCVAFNTLMLG 384
           +   +  ++ G
Sbjct: 595 NVYTYGVMIDG 605



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P     T ++  L K   ++K+  +   M+ + ++PDV  +++ I  FC      +A +L
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQL 268

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M   GV PNVVT++ ++  LCK+G ++EA +  E M++ GV      Y+ L++G   
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             + N A  +       G   N   Y+ LI+GYCK   +  AL +  +M+SKGI P  VT
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
            N++  G  +I Q+E+A  + +EM   G + +  A+ T I  LC N     AL   R + 
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     +    + L+ GLCK G+   A EL+  L      A++VT N +IH LC  G M 
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 508

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A  L   M  +G   D + +NTL+ GC +  +  +  +L   M
Sbjct: 509 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 160/320 (50%), Gaps = 6/320 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G   + ITY+TLI+G C+ G       L  EM+    E      PD  
Sbjct: 509 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE------PDTF 562

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G+C+ G +D+A  L  + K +++ P+V TY  +I G+C A+   E ++LF E+
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q ++ N V ++ ++   C+NG   EA +L + M   G+ P    Y++L+ G C  GR+
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK L   M   G   NV  Y+ LI GYCK  +++  +++  EM S  I P  +TY  +
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A KL  EM   G+  DT  Y    +G CK G I E  ++   +     
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802

Query: 302 ELDIRSYSCLIDGLCKSGRL 321
            LD  +Y+ L+ G  +   L
Sbjct: 803 PLDEITYTTLVHGWQQPSAL 822



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 3/289 (1%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  + ++GV P V T + ++  L K  ++E++  + E M Q GV P+ ++++T ++ FC
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFC 257

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+V  A +LF  ME +G   NV +Y+ LI+G CK+  ++ A     +M+  G+  T++
Sbjct: 258 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 317

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY+ L  GL ++ +   A  +  E    G   +   Y T IDG CK G + +AL +   +
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGK 355
                  +  + + +I G CK G+++ A  +    L RG  I +   +  +IH LC + +
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI-NPGAFTTIIHWLCMNSR 436

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + A     +M  + + P+     TL+ G  +  + S  VEL  R+ E+
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 6/175 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +++ G  P   TYS+LI+G+C  G    A  L +EM     + G++  P+ 
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEM----RKEGLL--PNV 701

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I G CK G +DK   +L +M   +I+P+ +TY  +I G+  + D   A +L  E
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           M+ +G+ P+ VT++V+ +  CK GK+EE  ++ + M Q G+  +   Y TL+ G+
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 200 VFSYSILINGYC---KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           V +  +LI+ YC   +N     A+ ++  + +KG+ PTV T   L   L + +++E+++ 
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F+ M R GV+ D + + T I+  CK G + +A++LF  +  L    ++ +Y+ LI GLC
Sbjct: 234 VFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G L  A+     + +  + A ++TY+++I+ L    K ++A+ +  +   KG  P+ V
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 377 AFNTLMLG 384
            +NTL+ G
Sbjct: 353 VYNTLIDG 360


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 220/443 (49%), Gaps = 54/443 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++T++    C PNV T+S LI+GLC++G+   AL+LF+EM     + G++  PDA  
Sbjct: 180 ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT----QRGIL--PDAFT 233

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-------- 114
           Y  +I GLC+   VD A  L  +MKD  + PD VT N+++ GFC  +  +EA        
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 115 ---------------------KR------LFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                                KR      L+ +M++  V+P+V  ++++M  L + GK+ 
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A +LL  M + GV P+   YN L+ GFC  G ++ A+ L + +    C  NV +YSILI
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM------ 261
           +G C+N     A  +++EM   G  P+ VT+N+L  GL +  Q+E+A  LF +M      
Sbjct: 414 SGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNP 473

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                  Q      D+ + +  ++ LC +G I +A  +   L        I +Y+ L++G
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK G    A++LF  +    L  D VTY  +I+ L    + + A+ +F  ME  G  PD
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 375 CVAFNTLMLGCIRNNETSKVVEL 397
              + T+M    R  E  +   L
Sbjct: 594 AAVYRTMMTWMCRRMELPRAFSL 616



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 214/450 (47%), Gaps = 54/450 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  ++ F C P+V TY+ +++ L +    ++AL ++  M+  N      C P+  
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN------CLPNVA 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +IDGLCK G V  A  L  +M  + I PD  TY  VI G C +   ++A RLF +M
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV P+ VT + +++  C   +++EA  LL L  + G   +   Y+ L+ G     R 
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              + L+  M     K +V+ Y+I++ G  +  ++  AL L +EM   G+ P  V YN L
Sbjct: 318 EDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +  A  L  E+ RH    +   Y   I G+C+NG   +A E+F  +  L C
Sbjct: 378 IKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGC 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL---------------PRGVL---------- 336
                +++ LIDGLCK+G+L+ A  LF+ +               P  VL          
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVE 497

Query: 337 -----------------IAD------VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
                            +AD      + TYNI+++  C  G  + A+ LF +M+ KG++P
Sbjct: 498 QLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSP 557

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V + TL+ G +R        ++  +M++
Sbjct: 558 DTVTYGTLINGLLRFQREEDAYKVFDQMEK 587



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 182/358 (50%), Gaps = 6/358 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           LK  G + +   +  LI    + G T  A+  F  M + +      C PD   Y  I+D 
Sbjct: 117 LKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFD------CTPDVYTYNMILDV 170

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L ++ F+  A  +  +M   N  P+V T++ +I G C + +  +A  LF EM  +G+ P+
Sbjct: 171 LIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPD 230

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T+ V++  LC++ ++++A +L + M   GV P+    N L++GFC+  RV+ A  L  
Sbjct: 231 AFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLR 290

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
             E  G   +V  YS LI G  + K  E    LY +M+   +KP V  Y  +  GL E  
Sbjct: 291 LFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAG 350

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V  A +L +EM   GV  DT  Y   I G C  G + EA  L   +    C  ++++YS
Sbjct: 351 KVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYS 410

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
            LI G+C++G  + A E+F+ + +       VT+N +I  LC  G+++KAH LF  ME
Sbjct: 411 ILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 204/451 (45%), Gaps = 88/451 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L    +  G   +V  YS LI GL R         L+ +MI  N       KPD  
Sbjct: 284 EAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN------VKPDVY 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT ++ GL + G V  A ELL +M +  + PD V YN +I+GFC     +EA+ L +E+
Sbjct: 338 LYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEI 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNV T+S+++  +C+NG   +A ++   M ++G  P+A  +N+L+DG C TG++
Sbjct: 398 SRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQL 457

Query: 182 NRAKELFVSME-----------SMGCKH-------------------------------- 198
            +A  LF  ME           S G  H                                
Sbjct: 458 EKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517

Query: 199 -----NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                 +++Y+IL+NG+CK     GA  L+ EM  KG+ P  VTY TL  GL    + E 
Sbjct: 518 SGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREED 577

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCE---------- 302
           A+K+FD+M+++G   D   YRT +  +C+   +  A  L+ + LR ++ +          
Sbjct: 578 AYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEG 637

Query: 303 -----------------------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
                                   D+  Y+  + GLC++ R+  A ++F  L    ++  
Sbjct: 638 YFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVIT 697

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
                 +I+ L  +G +D+A D+FL    KG
Sbjct: 698 PPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 146/293 (49%)

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           +++A   F  M D    P+V T+++I+D L +   +  A  +   M+++   PN   ++ 
Sbjct: 142 TDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSI 201

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+DG C +G V  A  LF  M   G   + F+Y ++I+G C++K ++ A  L+ +M   G
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG 261

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P  VT N L  G   + +V+ AF L    ++ G   D   Y   I GL +     +  
Sbjct: 262 VGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQ 321

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L+R +     + D+  Y+ ++ GL ++G+++ A EL + +    ++ D V YN++I   
Sbjct: 322 LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGF 381

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G + +A  L L++      P+   ++ L+ G  RN  T    E+ + M++
Sbjct: 382 CDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEK 434



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 35/285 (12%)

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +I D L     +E   Q LE +   G++ +   +  L+  +   G  ++A E F SM   
Sbjct: 96  LITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDF 155

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            C  +V++Y+++++   +   +  AL++Y+ M+     P V T++ L  GL +   V+ A
Sbjct: 156 DCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDA 215

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-------ILKCE----- 302
             LFDEM + G+  D + Y   I GLC++  + +A  LF  ++        + C      
Sbjct: 216 LHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275

Query: 303 -----------------------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
                                  LD+R YSCLI GL ++ R +    L+  +    +  D
Sbjct: 276 FCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPD 335

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           V  Y IM+  L   GK+  A +L  +M   GV PD V +N L+ G
Sbjct: 336 VYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKG 380


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 206/401 (51%), Gaps = 9/401 (2%)

Query: 6   LFTKLKAFG--CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           L  +++A G  C PN +TY+ +I GL R G+   A  L EEM        +  K  +  Y
Sbjct: 253 LLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-------RLSKKASSFTY 305

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
             +I GL   GFV K  +L L+M+++ I P VVTYN++I G   +     A+  F+EM  
Sbjct: 306 NPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRA 365

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G+ P+V+T++ +++  CK G  +EA  L   + + G+ P    YN L+DG+C  G +  
Sbjct: 366 MGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 425

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A+ L   M   GC  +V++Y+IL+ G      +      + EMLSKG++P    YNT   
Sbjct: 426 ARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRIC 485

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
               +  + ++F+L + +   G+++DT  Y   IDGLCK G + +A EL   +     + 
Sbjct: 486 AEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQP 545

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+CLI   C+ G L+ A + F+ +    L    VTY ++IHA C  G +  A+  F
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M  +GV P+ + +N L+    R   T       + M ER
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLER 646



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 198/387 (51%), Gaps = 6/387 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           +A+  ++   G EP+++TY+TL++   + G       L +EM       G  C P+ V Y
Sbjct: 216 SAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEM----EARGSSCLPNDVTY 271

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
             +I GL ++G++++A EL+ +M+         TYN +I G        +   L +EM +
Sbjct: 272 NVVIAGLARKGYLEEAAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMEN 330

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ P VVT++ ++  L ++G++E A      M  +G+ P+   YN+L++G+C  G    
Sbjct: 331 EGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKE 390

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  LF  +   G    V +Y+ILI+GYC+  ++E A  L  EM+ +G  P V TY  L  
Sbjct: 391 ALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMK 450

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G   +  +    + FDEM   G+  D +AY T I      G I ++ +L   + +     
Sbjct: 451 GSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISS 510

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+ LIDGLCK+G LK A EL   +    L  D +TY  +IHA C  G + +A   F
Sbjct: 511 DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFF 570

Query: 364 LDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            DM + G+ P  V +  ++   C R N
Sbjct: 571 NDMISDGLPPSAVTYTVIIHAYCRRGN 597



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 174/343 (50%), Gaps = 11/343 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V+TY+ +I+GL ++G    A   F EM       G++  PD + Y ++++G CK 
Sbjct: 332 GIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM----RAMGLL--PDVITYNSLLNGYCKA 385

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  L   ++   + P V+TYN +I G+C   D  EA+RL  EM++QG  P+V T+
Sbjct: 386 GNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTY 445

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++M        +    +  + M+  G+RP+ F YNT +      G ++++ +L   +  
Sbjct: 446 TILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIML 505

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ILI+G CK   ++ A  L  +M+S G++P  +TY  L     E   +  
Sbjct: 506 EGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLRE 565

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K F++M   G+      Y   I   C+ G +  A   FR +     E +  +Y+ LI 
Sbjct: 566 ARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 625

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            LC+ GR ++A+  F+ +    L+ +  TY ++I     DGK+
Sbjct: 626 ALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI-----DGKL 663



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 41/312 (13%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A F +++A G  P+VITY++L+NG C+ G+   AL LF ++            P  + 
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG------LAPTVLT 409

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDG C+ G +++A+ L  +M ++   PDV TY  +++G          +  F EM+
Sbjct: 410 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML 469

Query: 123 DQGVQPN-----------------------------------VVTFSVIMDELCKNGKME 147
            +G++P+                                    VT+++++D LCK G ++
Sbjct: 470 SKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLK 529

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A +L+  MI  G++P+   Y  L+   C  G +  A++ F  M S G   +  +Y+++I
Sbjct: 530 DAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVII 589

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           + YC+   +  A   + +ML +G++P  +TYN L   L  + + + A++ F EM   G+ 
Sbjct: 590 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLV 649

Query: 268 ADTWAYRTFIDG 279
            + + Y   IDG
Sbjct: 650 PNKYTYTLLIDG 661



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 160/318 (50%), Gaps = 9/318 (2%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M    + PDV   N V+R    A   ++   +  EM+  G++P++VT++ ++D   K G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 145 KMEEASQLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           + ++   LL+ M   G    PN   YN ++ G    G +  A EL   M  +  K + F+
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASSFT 304

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI G      ++    L  EM ++GI PTVVTYN +  GL +  Q+E A   F EM+
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   Y + ++G CK G   EAL LF  LR       + +Y+ LIDG C+ G L+
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 323 IAWELFHSLPRGVLIADVVTYNIMI---HALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            A  L   +     + DV TY I++   H +C+   +    + F +M +KG+ PDC A+N
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCS---LAMTREFFDEMLSKGLRPDCFAYN 481

Query: 380 TLMLGCIRNNETSKVVEL 397
           T +   I   + SK  +L
Sbjct: 482 TRICAEITLGDISKSFQL 499



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 179/385 (46%), Gaps = 44/385 (11%)

Query: 35  TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
           + + L+ F EM       GV   PD      ++  L      D    +  +M    I P 
Sbjct: 177 STLCLSAFREM----ASHGVA--PDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPS 230

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ--PNVVTFSVIMDELCKNGKMEEASQL 152
           +VTYN+++  F      ++   L  EM  +G    PN VT++V++  L + G +EEA++L
Sbjct: 231 IVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAEL 290

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M ++  + ++F YN L+ G    G V +  +L + ME+ G    V +Y+ +I+G  +
Sbjct: 291 VEEM-RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQ 349

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           + +IE A + + EM + G+ P V+TYN+L  G  +    + A  LF +++R G+A     
Sbjct: 350 SGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLT 409

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-L 331
           Y   IDG C+ G + EA  L   +    C  D+ +Y+ L+ G      L +  E F   L
Sbjct: 410 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML 469

Query: 332 PRGV----------------------------------LIADVVTYNIMIHALCADGKMD 357
            +G+                                  + +D VTYNI+I  LC  G + 
Sbjct: 470 SKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLK 529

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +L + M + G+ PDC+ +  L+
Sbjct: 530 DAEELMMQMISNGLQPDCITYTCLI 554



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 39/214 (18%)

Query: 220 LSLYSEMLSKG-----------------------------------IKPTVVTYNTLFIG 244
           LS + EM S G                                   I+P++VTYNTL   
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 245 LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             +  + ++   L  EM+  G +   +   Y   I GL + GY+ EA EL   +R+ K +
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-K 299

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +Y+ LI GL   G +K   +L   +    ++  VVTYN MIH L   G+++ A   
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 363 FLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVV 395
           F++M A G+ PD + +N+L+ G C   N+   ++
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALL 393


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 205/373 (54%), Gaps = 9/373 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+ TY+ +++GLC+ G    A +++E M+  N +      PD + Y T+I GLC+ 
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ------PDMITYGTMIHGLCRS 313

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD A  +  +M    + PDVV YNS+++GFC+A    EA + +  M   G++ NV ++
Sbjct: 314 TDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSY 372

Query: 134 SVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++  L   G +++A+ L EL+ +   + P+   ++T++ G C  G  N++ ++     
Sbjct: 373 NIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEAR 432

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           + G + + FSYS +I+G CK+  ++ A+ LY ++     KP    YN L  G  +  +  
Sbjct: 433 TSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFS 492

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +++ +M  +  +  T  Y T I GLCK    +EA    R +    C LD+ +Y  LI
Sbjct: 493 DAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK-GV 371
            GLC+  ++  A  L++ +    L  DVV +NI+IH LC+ GK+D+A  L  +M+ K   
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNC 612

Query: 372 APDCVAFNTLMLG 384
            P+ V +NTLM G
Sbjct: 613 CPNVVTYNTLMDG 625



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 205/439 (46%), Gaps = 39/439 (8%)

Query: 3   AAALFTKLKAF-GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A A F +L +F GC P V +++ L++   R      A   F  +   +G FG    P+  
Sbjct: 103 ALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASL--SHGAFGRRIAPNLQ 160

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LC  G +D+A  L   ++ + + PD +TY++++ GF   N  + A  L  EM
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGR 180
               VQP+ V ++ ++    +NG+ E+A ++ E +++  G  PN   YN ++DG C  G 
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGM 280

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +++  M +   + ++ +Y  +I+G C++ +++ A  +YSEM+  G+ P VV YN+
Sbjct: 281 FKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNS 340

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV---------------------AADTW-------- 271
           L  G     +V  A+K +D M   G+                     A D W        
Sbjct: 341 LLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDS 400

Query: 272 ------AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                  + T I GLC+ G+  ++L++    R    ELD  SYS +I GLCK GRL  A 
Sbjct: 401 LSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAV 460

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L+  +       +   YN +I+  C   K   A  ++  M     +P  + +NTL+ G 
Sbjct: 461 KLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGL 520

Query: 386 IRNNETSKVVELLHRMDER 404
            +  +  +       M E+
Sbjct: 521 CKAEKYLEASRFTREMLEK 539



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 212/422 (50%), Gaps = 42/422 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ ++ A   +P++ITY T+I+GLCR+     A  ++ EMI    + G+V  PD V
Sbjct: 283 EAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI----KTGLV--PDVV 336

Query: 62  IYTTIIDGLCKEG----------------------------------FVDKAKELL-LQM 86
           IY +++ G C  G                                   VDKA +L  L  
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLE 396

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           KD +++PD+VT++++I G C    +N++ ++  E    G + +  ++S ++  LCK+G++
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +L E +     +PN+ +YN L++GFC   + + A  ++  M    C     +Y+ L
Sbjct: 457 DDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTL 516

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK ++   A     EML KG    V TY +L  GL    +++ A  L++++   G+
Sbjct: 517 IHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAW 325
             D   +   I GLC  G + EA +L   ++    C  ++ +Y+ L+DG  ++G    A 
Sbjct: 577 QTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAA 636

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L+ ++    L+ D+++YN  I  LC+  +  +   L  +M A G+ P  + +N L+   
Sbjct: 637 SLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696

Query: 386 IR 387
           I+
Sbjct: 697 IK 698



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 215/442 (48%), Gaps = 46/442 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  L+  G  P+ ITYSTL++G  +      AL L +EM +         +PDAV
Sbjct: 177 RAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPS------YEVQPDAV 230

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  ++ G  + G  +KA  +  Q+ +D   +P++ TYN ++ G C      EA  ++  
Sbjct: 231 CYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWER 290

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+    QP+++T+  ++  LC++  ++ A+++   MI+ G+ P+  +YN+L+ GFC  GR
Sbjct: 291 MVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGR 350

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPTVVTY 238
           V  A + + SM   G + NV SY+I++ G      ++ A  L+ E+L K   + P +VT+
Sbjct: 351 VGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTF 408

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR---- 294
           +T+  GL E     ++ ++ +E +  G   D ++Y + I GLCK+G + +A++L+     
Sbjct: 409 STMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468

Query: 295 -------------------------TLRILK------CELDIRSYSCLIDGLCKSGRLKI 323
                                     +R+        C     +Y+ LI GLCK+ +   
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE 528

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A      +     + DV TY  +I  LC D K+D A  L+  +  KG+  D V  N L+ 
Sbjct: 529 ASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G     +  +  +LL  M E+N
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKN 610



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 147/282 (52%), Gaps = 7/282 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  + +  G E +  +YS++I+GLC+ G    A+ L+E++   +       KP++ IY  
Sbjct: 427 ILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS------FKPNSHIYNA 480

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G C+      A  +  QM + + +P  +TYN++I G C A    EA R   EM+++G
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              +V T+  ++  LC++ K++ A  L   ++  G++ +  ++N L+ G C  G+V+ A 
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEAS 600

Query: 186 ELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           +L   M E   C  NV +Y+ L++G+ +    + A SL+  +L  G+ P +++YNT   G
Sbjct: 601 QLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKG 660

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L   ++     +L +EM   G+      +   +  + K G I
Sbjct: 661 LCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +++++    C P  ITY+TLI+GLC+    + A     EM+         C  D  
Sbjct: 493 DAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG------CMLDVN 546

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC++  +D A  L  Q+ DK +  DVV +N +I G C A   +EA +L  EM
Sbjct: 547 TYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEM 606

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            ++    PNVVT++ +MD   + G  ++A+ L   +++ G+ P+   YNT + G C   R
Sbjct: 607 KEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNR 666

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                +L   M + G      +++IL+    K   I+
Sbjct: 667 TPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 99/173 (57%), Gaps = 7/173 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA+    ++   GC  +V TY +LI GLCR      AL L+ ++++         + D 
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG------LQTDV 580

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V++  +I GLC  G VD+A +LL +MK+K N  P+VVTYN+++ GF      ++A  L++
Sbjct: 581 VMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWM 640

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            +++ G+ P++++++  +  LC   +  E  QLL  M+  G+ P A  +N L+
Sbjct: 641 AILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 210/403 (52%), Gaps = 13/403 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA     ++  G  P+V+T++ +I G C+      A  +F+EMI  N      C+PD  
Sbjct: 113 DAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSN-----RCQPDCF 167

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +Y  +IDG CKE  +D+A ELL +M+ ++ I PDVV YNS++ G C +N   EA +   E
Sbjct: 168 LYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDE 227

Query: 121 -MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+ QG  P VVT++ ++   CK  KM+ A ++   M++  ++P    Y+ ++DG    G
Sbjct: 228 TMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAG 287

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  A  +   ME++GC+ NV  Y+ LI+G CK+  ++ A +LY  M   G  P   TY 
Sbjct: 288 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 347

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL        + E A  LFD + R     D   Y   + GLC+   + +A  LFR +R+ 
Sbjct: 348 TLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLA 406

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDK 358
               D  +Y+ L+ G  +S R + A+ +   L      +A+++TYN +I   C +  M  
Sbjct: 407 GVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGM-- 464

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              LF +M  +G+APD   ++ L+   + + E  +  +L   M
Sbjct: 465 --VLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEM 505



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 217/406 (53%), Gaps = 12/406 (2%)

Query: 3   AAALFTKLK--AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           AAA F + K  A    P  ++ S +I+  C++G    AL +   M++          P+ 
Sbjct: 42  AAARFLREKTAAGSIFPGFLS-SVVIDRACKSGDLRGALLILATMLHSG-----TPPPNQ 95

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             + ++ID L K   +  A   L  M+D  I+PDVVT+  +IRGFC       A  +F E
Sbjct: 96  HAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQE 155

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLT 178
           M+     QP+   + V++D  CK  +M+ A +LL E+ ++  ++P+  +YN+++DG C +
Sbjct: 156 MIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRS 215

Query: 179 GRVNRA-KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            R   A K L  +M   GC   V +Y+ LI G CK K+++ A+ +++ ML + I+PT+V+
Sbjct: 216 NRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVS 275

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ +  GL +  +V  A+++  EM+  G   +   Y T IDGLCK+G++ +A  L+R ++
Sbjct: 276 YSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMK 335

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 + R+Y+ LID  C++ R + A  LF  + R     DV  Y  ++  LC + ++D
Sbjct: 336 RSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLD 394

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  LF +M   GV+ D  A+N L+ G  R+    +   +L  + +
Sbjct: 395 DARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGD 440



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 14/234 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  GCE NV+ Y+TLI+GLC++G    A  L+  ++  +G F     P+  
Sbjct: 291 DAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY-RIMKRSGAF-----PNQR 344

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID  C+    + A  L   ++D     DV  Y +V+ G C     ++A+ LF EM
Sbjct: 345 TYATLIDTFCRNDRTETALGLFDHIRD-YCPLDVAMYTAVVSGLCRERRLDDARALFREM 403

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCL-TG 179
              GV  +   ++V++    ++ + EEA ++L EL    G   N   YNT++ G CL +G
Sbjct: 404 RLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESG 463

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            V     LF  M   G   +  +YS LI+    + EI  A  L  EML+ G+ P
Sbjct: 464 MV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSP 512



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 6/233 (2%)

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT-VV 236
           +G  N A        + G     F  S++I+  CK+ ++ GAL + + ML  G  P    
Sbjct: 37  SGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGTPPPNQH 96

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            + +L   L +  ++  A +  + M+  G+  D   +   I G CKN  +  A E+F+ +
Sbjct: 97  AFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEM 156

Query: 297 -RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADG 354
            +  +C+ D   Y  LIDG CK  R+  A EL   +     I  DVV YN ++  LC   
Sbjct: 157 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 216

Query: 355 KMDKAHDLFLD--MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  +A   FLD  M  +G +P  V + +L+ G  +  +    V + + M ER 
Sbjct: 217 RFLEAWK-FLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERK 268


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 209/412 (50%), Gaps = 29/412 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           +A  LF  ++  G  PNV+TY+ LI+GLC+ G+   A    E+M+               
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390

Query: 49  NG--------EFGVVCK--------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG        E   V K        P+ V+Y T+IDG CK G +  A  +   M  K IN
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+ VT NS+I+GFC      +A+ +  EM+ +G   N   F+ I+  LC N + E A + 
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M+   +RPN  +  TL+ G C  G+ + A EL+  +   G   N+ + + LI+G CK
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L  +ML +G     +TYNTL  G  +  +VE  FKL  EM + G+  DT+ 
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I G+C+ G + EA+ L+   +      ++ +Y  +IDG CK+ +++   +LF  L 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              L  + V YN +I A C +G   +A  L  DM +KG+ P    +++L+ G
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 197/400 (49%), Gaps = 29/400 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEFGVVC------------ 56
           G  PN +T +++I G C+ G    A  + EEM++       G F  +             
Sbjct: 448 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 507

Query: 57  ------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                       +P+  + TT++ GLCKEG    A EL  ++ +K    ++VT N++I G
Sbjct: 508 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 567

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            C   +  EA RL  +M+++G   + +T++ ++   CK GK+EE  +L   M++ G+ P+
Sbjct: 568 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 627

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            F YN L+ G C  G+++ A  L+   +S     NV++Y ++I+GYCK  +IE    L++
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 687

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+L++ ++   V YNTL            AFKL D+M+  G+   T  Y + I G+C  G
Sbjct: 688 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 747

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + +A  L   +R      ++  Y+ LI G CK G++     +   +    +  + +TY 
Sbjct: 748 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 807

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +MI      G M  A  L  +M  KG+ PD V +N L  G
Sbjct: 808 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG 847



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 193/371 (52%), Gaps = 6/371 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V  +ST IN  C+ G    A+ LF +M     + GV   P+ V Y  +I GLCK 
Sbjct: 308 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM----EKLGV--SPNVVTYNNLIHGLCKH 361

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A     +M    +N  ++TY+ +I G       NEA  +  E +++G  PN V +
Sbjct: 362 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 421

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK G + +A ++   M+  G+ PN+   N+++ GFC  G++ +A+ +   M S
Sbjct: 422 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 481

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C N   E AL    EML + ++P      TL  GL +  +   
Sbjct: 482 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 541

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G  A+       I GLCK G + EA+ L + +      LD  +Y+ LI 
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G+++  ++L   + +  +  D  TYN++IH +C  GK+D+A +L+ + +++ + P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 374 DCVAFNTLMLG 384
           +   +  ++ G
Sbjct: 662 NVYTYGVMIDG 672



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P     T ++  L K   ++K+  +   M+ + ++PDV  +++ I  FC      +A +L
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQL 335

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M   GV PNVVT++ ++  LCK+G ++EA +  E M++ GV      Y+ L++G   
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             + N A  +       G   N   Y+ LI+GYCK   +  AL +  +M+SKGI P  VT
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
            N++  G  +I Q+E+A  + +EM   G + +  A+ T I  LC N     AL   R + 
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     +    + L+ GLCK G+   A EL+  L      A++VT N +IH LC  G M 
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQ 575

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A  L   M  +G   D + +NTL+ GC +  +  +  +L   M
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 6/288 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+   G   + ITY+TLI+G C+ G       L  EM+    E      PD  
Sbjct: 576 EAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE------PDTF 629

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G+C+ G +D+A  L  + K +++ P+V TY  +I G+C A+   E ++LF E+
Sbjct: 630 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 689

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q ++ N V ++ ++   C+NG   EA +L + M   G+ P    Y++L+ G C  GR+
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK L   M   G   NV  Y+ LI GYCK  +++  +++  EM S  I P  +TY  +
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             G  +   ++ A KL  EM   G+  DT  Y    +G CK G I E 
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 138/252 (54%), Gaps = 17/252 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK-----PDAVIYTTIID 68
           G EP+  TY+ LI+G+CR G    A+NL+ E           CK     P+   Y  +ID
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE-----------CKSRDLVPNVYTYGVMID 671

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G CK   +++ ++L  ++  +N+  + V YN++IR +C   ++ EA +L  +M  +G+ P
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
              T+S ++  +C  G+ME+A  L++ M + G+ PN   Y  L+ G+C  G++++   + 
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S     N  +Y+++I+GY K+ +++ A  L  EM+ KGI P  VTYN L  G  + 
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851

Query: 249 HQVERAFKLFDE 260
            ++E   KL  E
Sbjct: 852 GKIEEG-KLLAE 862



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 3/289 (1%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  + ++GV P V T + ++  L K  ++E++  + E M Q GV P+ ++++T ++ FC
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFC 324

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+V  A +LF  ME +G   NV +Y+ LI+G CK+  ++ A     +M+  G+  T++
Sbjct: 325 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 384

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY+ L  GL ++ +   A  +  E    G   +   Y T IDG CK G + +AL +   +
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGK 355
                  +  + + +I G CK G+++ A  +    L RG  I +   +  +IH LC + +
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI-NPGAFTTIIHWLCMNSR 503

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + A     +M  + + P+     TL+ G  +  + S  VEL  R+ E+
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 88/154 (57%), Gaps = 6/154 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   +++ G  P   TYS+LI+G+C  G    A  L +EM     + G++  P+ 
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEM----RKEGLL--PNV 768

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I G CK G +DK   +L +M   +I+P+ +TY  +I G+  + D   A +L  E
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           M+ +G+ P+ VT++V+ +  CK GK+EE   L E
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 200 VFSYSILINGYC---KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           V +  +LI+ YC   +N     A+ ++  + +KG+ PTV T   L   L + +++E+++ 
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F+ M R GV+ D + + T I+  CK G + +A++LF  +  L    ++ +Y+ LI GLC
Sbjct: 301 VFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G L  A+     + +  + A ++TY+++I+ L    K ++A+ +  +   KG  P+ V
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 419

Query: 377 AFNTLMLG 384
            +NTL+ G
Sbjct: 420 VYNTLIDG 427


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 211/402 (52%), Gaps = 10/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +  + F +L      P +I +  ++  L +  H   A++L  +M + G        +P+ 
Sbjct: 48  DTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKG-------IEPNL 100

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V    +I+  C  G +  +  +L ++      PD +T N++++G C   +   +     +
Sbjct: 101 VTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDK 160

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG Q N V++  +++ LCK G+   A +LL ++     RP+  +Y+T++DG C    
Sbjct: 161 VVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKI 220

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN+A + F  M + G   NV +YS LI G+C   ++ GA SL +EM+ K I P V TYN 
Sbjct: 221 VNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNI 280

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  +V+ A KL  EM   G  AD   Y + +DGLCK+  + +A  LF  ++   
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + +  +Y+ LIDGLCK GRLK A +LF H L +G  I DV TYN+MI  LC +G  DKA
Sbjct: 341 IQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCI-DVRTYNVMISGLCKEGMFDKA 399

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +   ME  G  P+ V F+ ++      +E  K  +LLH M
Sbjct: 400 LAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 200/369 (54%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +++  G EPN++T + LIN  C  G    + ++  +++    + G   +PD + 
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKIL----KLGY--QPDTIT 137

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             T++ GLC +G V ++     ++  +    + V+Y +++ G C   ++  A +L   + 
Sbjct: 138 LNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIE 197

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+  +P+VV +S I+D LCK+  + +A      M   G+ PN   Y+TL+ GFCL G++ 
Sbjct: 198 DRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLM 257

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+ILI+  CK  +++ A  L +EM  KG    VVTYN++ 
Sbjct: 258 GAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVL 317

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +++A  LF +M++ G+  + + Y   IDGLCK G +  A +LF+ L +  C 
Sbjct: 318 DGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCC 377

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D+R+Y+ +I GLCK G    A  +   +     I + VT++I+I +L    + DKA  L
Sbjct: 378 IDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKL 437

Query: 363 FLDMEAKGV 371
              M AKG+
Sbjct: 438 LHGMIAKGL 446



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 35/255 (13%)

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   ME  G + N+ + +ILIN +C   ++  + S+  ++L  G +P  +T NTL  
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 143

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL    +V+R+    D++   G   +  +Y T ++GLCK G    A++L R +       
Sbjct: 144 GLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLI------------------------- 337
           D+  YS +IDGLCK   +  A++ F  +  RG+                           
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 338 ---------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
                     +V TYNI+I ALC +GK+ +A  L  +M  KG   D V +N+++ G  ++
Sbjct: 264 NEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKS 323

Query: 389 NETSKVVELLHRMDE 403
               K   L  +M +
Sbjct: 324 QNLDKATALFMKMKK 338



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 207 INGY-CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           I GY  K K    A+SL  +M  KGI+P +VT N L      + Q+  +F +  ++ + G
Sbjct: 71  ILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLG 130

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              DT    T + GLC  G +  +L     +     +++  SY  L++GLCK G  + A 
Sbjct: 131 YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAV 190

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   +       DVV Y+ +I  LC D  +++A+D F +M A+G+ P+ + ++TL+ G 
Sbjct: 191 KLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGF 250

Query: 386 IRNNETSKVVELLHRMDERN 405
               +      LL+ M  +N
Sbjct: 251 CLAGQLMGAFSLLNEMILKN 270



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 6/195 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A +L  ++      PNV TY+ LI+ LC+ G    A  L  EM +  G+       D 
Sbjct: 257 MGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEM-HHKGQ-----PADV 310

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y +++DGLCK   +DKA  L ++MK   I P+  TY ++I G C       A++LF  
Sbjct: 311 VTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQH 370

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +G   +V T++V++  LCK G  ++A  +   M   G  PNA  ++ ++        
Sbjct: 371 LLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDE 430

Query: 181 VNRAKELFVSMESMG 195
            ++A++L   M + G
Sbjct: 431 NDKAEKLLHGMIAKG 445


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 197/360 (54%), Gaps = 6/360 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +L    CEP VITY+ LI      G   VA+ L +EM++   E      PD + 
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE------PDTLT 245

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  II G+CKE  VDKA ELL  +  +   PD++TYN ++R        +E ++L  EM+
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PNVVT S+++  LC++GK+EEA  LL  M + G++P+A+ Y+ L+ GFC  GR++
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E    M S GC  ++ +Y+ ++ G C+  + + AL ++ ++   G  P V +YNTLF
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLF 425

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L+      RA ++  ++   G+  D   Y + I  LC++G + EA+EL   ++  +  
Sbjct: 426 SALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYR 485

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ SY+ ++ GLCK  R   A E+  ++       +  TY ++I  +   G   +A +L
Sbjct: 486 PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 208/403 (51%), Gaps = 9/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++K+ G  P+V+TY+ +I   C  G   +AL +FEE++  N      C+P  + 
Sbjct: 157 ANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN------CEPTVIT 210

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I+    +G +D A +LL +M  K + PD +TYN++IRG C     ++A  L   + 
Sbjct: 211 YTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS 270

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+++T+++++  L   GK  E  +L+  MI IG +PN   ++ L+   C  G+V 
Sbjct: 271 SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L  SM+  G K + + Y  LI G+C+   ++ A      M+S G  P +V YNT+ 
Sbjct: 331 EAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIM 390

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL    + ++A ++F+++   G   +  +Y T    L  +G    ALE+   L     +
Sbjct: 391 AGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LI  LC+ G +  A EL   +  G    +VV+YNI++  LC   + + A ++
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEV 510

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL---LHRMD 402
              M  KG  P+   +  L+ G   +   ++ +EL   LH M+
Sbjct: 511 LAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN 553



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 206/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+ +G +P+V  Y+ LI+G  +      A  + + M    G       PD V
Sbjct: 122 KATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRM-KSRGFL-----PDVV 174

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I   C  G +D A E+  ++   N  P V+TY  +I         + A +L  EM
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+ +T++ I+  +CK   +++A +LL  +   G +P+   YN L+      G+ 
Sbjct: 235 LSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKW 294

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  ++L   M S+GCK NV ++SILI   C++ ++E A++L   M  KG+KP    Y+ L
Sbjct: 295 SEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPL 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +++ A +  + M   G   D   Y T + GLC+ G   +ALE+F  L  + C
Sbjct: 355 IAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC 414

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ SY+ L   L  SG    A E+   L    +  D +TYN +I  LC DG +D+A +
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L +DM++    P+ V++N ++LG  + N  +  +E+L  M E+
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK 517



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 175/333 (52%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G  +++   L  M DK   PDV+    +I+GF  + +  +A R+ +E++++  +P+V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRV-MEILERYGKPDV 138

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++ ++    K  ++E A+++L+ M   G  P+   YN ++  FC  G+++ A E+F  
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +    C+  V +Y+ILI     +  I+ A+ L  EMLSKG++P  +TYN +  G+ +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V++AF+L   +   G   D   Y   +  L   G   E  +L   +  + C+ ++ ++S 
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G+++ A  L  S+    L  D   Y+ +I   C +G++D A +    M + G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD V +NT+M G  R  +  + +E+  ++DE
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++  C  G+ N +      M   G   +V   + LI G+  ++ I G  +   E+L + 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNI-GKATRVMEILERY 133

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
            KP V  YN L  G  + +Q+E A ++ D M+  G   D   Y   I   C  G +  AL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           E+F  L    CE  + +Y+ LI+     G + +A +L   +    L  D +TYN +I  +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C +  +DKA +L   + ++G  PD + +N L+   +   + S+  +L+  M
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 203/385 (52%), Gaps = 14/385 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  LF ++    C P+  TY TL++GLC+      A++L +EM I G       C P   
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG-------CFPSPA 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+GLCK+G   +  +L+  M  K   P+ VTYN++I G C     ++A  L   M
Sbjct: 253 TFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRM 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VT+  I++ L K G+  + +++L LM + G   N +VY+ L+ G    G+ 
Sbjct: 313 VSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKS 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF      GCK N   YS L++G C++++ + A+ + SEM  KG  P   T+++L
Sbjct: 373 EEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSL 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G FE+    +A +++ +M +   A +   Y   I GLCK+G ++EA+ ++  +    C
Sbjct: 433 MKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGC 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKMD 357
             D+ +YS +I GLC +G ++ A +L++ +    P      DV+TYNI+ +ALC    + 
Sbjct: 493 RPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQ--PDVITYNILFNALCKQSSIS 550

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A DL   M  +G  PD V  N  +
Sbjct: 551 RAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 207/402 (51%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF ++   F C+P V ++++++N + + G    AL  +  ++ G  +  ++  P+ 
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVV-GAKDMNIL--PNV 181

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  II  +CK G VD A EL  +M  +   PD  TY +++ G C  +  +EA  L  E
Sbjct: 182 LSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDE 241

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+  TF+V+++ LCK G     ++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 242 MQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 301

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTYN 239
           +++A  L   M S  C  N  +Y  +ING  K  + ++GA  L   M  +G       Y+
Sbjct: 302 LDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVL-MEERGYIVNEYVYS 360

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GLF+  + E A +LF E    G   +T  Y   +DGLC++    EA+++   +   
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  +  ++S L+ G  + G    A E++  + +     + V Y+++IH LC DGK+ +A
Sbjct: 421 GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEA 480

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++  M A G  PD VA+++++ G        + ++L + M
Sbjct: 481 MMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEM 522



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 43/341 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  +++  GC P+  T++ LINGLC+ G       L + M      F   C P+ V
Sbjct: 234 EAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM------FLKGCVPNEV 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------- 104
            Y T+I GLC +G +DKA  LL +M      P+ VTY ++I G                 
Sbjct: 288 TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLM 347

Query: 105 ---------FCYA---------NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                    + Y+           S EA RLF E MD+G + N V +S ++D LC++ K 
Sbjct: 348 EERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKP 407

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA ++L  M   G  PNAF +++LM GF   G  ++A E++  M  + C  N   YS+L
Sbjct: 408 DEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVL 467

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           I+G CK+ ++  A+ ++++ML+ G +P VV Y+++  GL +   VE A KL++EM     
Sbjct: 468 IHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP 527

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               D   Y    + LCK   I  A++L  ++    C+ D+
Sbjct: 528 DSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDL 568



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 6/339 (1%)

Query: 72  KEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLF---IEMMDQGVQ 127
           K    +KA EL  +M  +    P V ++NSV+     A   + A   +   +   D  + 
Sbjct: 119 KAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNIL 178

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PNV++F++I+  +CK G ++ A +L   M      P+A+ Y TLMDG C   R++ A  L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M+  GC  +  ++++LING CK  +      L   M  KG  P  VTYNTL  GL  
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             ++++A  L D M       +   Y T I+GL K G  ++   +   +      ++   
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358

Query: 308 YSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           YS L+ GL K G+ + A  LF  S+ +G  + + V Y+ ++  LC D K D+A  +  +M
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKL-NTVLYSALVDGLCRDRKPDEAMKILSEM 417

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             KG AP+   F++LM G      + K +E+   M + N
Sbjct: 418 TDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKIN 456



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 142/264 (53%), Gaps = 9/264 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++ A +   ++  G   N   YS L++GL + G +  A+ LF+E ++        CK + 
Sbjct: 338 LDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKG------CKLNT 391

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ ++DGLC++   D+A ++L +M DK   P+  T++S+++GF    +S++A  ++ +
Sbjct: 392 VLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKD 451

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       N V +SV++  LCK+GK+ EA  +   M+  G RP+   Y++++ G C  G 
Sbjct: 452 MTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGS 511

Query: 181 VNRAKELFVSMESM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           V  A +L+  M  +    + +V +Y+IL N  CK   I  A+ L + ML +G  P +VT 
Sbjct: 512 VEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTC 571

Query: 239 NTLFIGLFE-IHQVERAFKLFDEM 261
           N     L E +   +   K  DE+
Sbjct: 572 NIFLRMLREKLDPPQDGAKFLDEL 595



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 26/186 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  ++ K+ A GC P+V+ YS++I GLC  G    AL L+ EM+    +     +PD 
Sbjct: 478 MEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPD----SQPDV 533

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  + + LCK+  + +A +LL  M D+  +PD+VT N                 +F+ 
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN-----------------IFLR 576

Query: 121 MMDQGVQPNVVTFSVIMDELC----KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           M+ + + P     +  +DEL     K  +   AS+++E+M+Q  + P A  +  ++   C
Sbjct: 577 MLREKLDPP-QDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635

Query: 177 LTGRVN 182
              ++ 
Sbjct: 636 QPKKIQ 641


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 198/370 (53%), Gaps = 9/370 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF + +  G  P++ T S LIN  C   H  +A ++F  ++           PDA+   
Sbjct: 79  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFH------PDAITLN 132

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC  G + K      Q+  +    D V+Y ++I G C A ++    RL  ++   
Sbjct: 133 TLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 192

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV ++ I++ LCKN  + +A  +   MI  G+ P+   Y TL+ GFC+ G++  A
Sbjct: 193 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEA 252

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCK---NKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             L   M+      +V+++S+LI+   K    K ++ A+SL+ EM  K + P +VTYN+L
Sbjct: 253 FSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + H +ERA  L  EM+ HG+  D ++Y   +DGLCK G +  A E F+ L +  C
Sbjct: 313 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGC 372

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L++  Y+ +I+GLCK+G    A +L   +     + + +T+  +I AL    + DKA  
Sbjct: 373 HLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEK 432

Query: 362 LFLDMEAKGV 371
           +  +M A+G+
Sbjct: 433 ILREMIARGL 442



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 11/407 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A A F  +      P    ++ +++ L +       ++LF++    NG       PD  
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQ-FEPNG-----ITPDLC 94

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +I+  C +  +  A  +   +  +  +PD +T N++I+G C+  +  +      ++
Sbjct: 95  TLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQV 154

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG Q + V++  +++ LCK G+ +  ++LL  +    V+P+  +YNT+++  C    +
Sbjct: 155 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +++  M   G   +V +Y+ LI+G+C   +++ A SL +EM  K I P V T++ L
Sbjct: 215 GDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVL 274

Query: 242 FIGLFE---IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
              L +      V+ A  LF+EM+   +  D   Y + IDGLCKN ++  A+ L + ++ 
Sbjct: 275 IDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKE 334

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMD 357
              + D+ SY+ L+DGLCK GRL+IA E F H L +G  + +V  YN+MI+ LC  G   
Sbjct: 335 HGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHL-NVWPYNVMINGLCKAGLFG 393

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A DL   ME KG  P+ + F T++      +E  K  ++L  M  R
Sbjct: 394 EAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIAR 440



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 9/233 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +++++   G  P+V+TY+TLI+G C  G    A +L  EM   N        PD  
Sbjct: 216 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN------INPDVY 269

Query: 62  IYTTIIDGLCKEG---FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            ++ +ID L KEG    VD+A  L  +MK KN+ PD+VTYNS+I G C  +    A  L 
Sbjct: 270 TFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALL 329

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM + G+QP+V ++++++D LCK G++E A +  + ++  G   N + YN +++G C  
Sbjct: 330 KEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKA 389

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           G    A +L   ME  GC  N  ++  +I    +  E + A  +  EM+++G+
Sbjct: 390 GLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 97/206 (47%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            F ++ +++   KNK     +SL+ +    GI P + T + L         +  AF +F 
Sbjct: 58  TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            + + G   D     T I GLC  G I + L     +     +LD  SY  LI+GLCK+G
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAG 177

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
             K    L   L    +  DVV YN +I++LC +  +  A D++ +M  KG++PD V + 
Sbjct: 178 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 237

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           TL+ G     +  +   LL+ M  +N
Sbjct: 238 TLIHGFCIMGKMKEAFSLLNEMKLKN 263


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 211/396 (53%), Gaps = 7/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F +++  GC PNV+TY+TLI+G C+         L   M     E      P+ + 
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLE------PNLIS 277

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+GLC+EG + +   +L +M  +  + D VTYN++I+G+C   + ++A  +  EM+
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+T++ ++  +CK G M  A++ L+ M   G+ PN   Y TL+DGF   G +N
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   M   G   +V +Y+ LING+C   ++  A+++  +M  KG+ P VV+Y+T+ 
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    + V+ A ++  +M   G+  DT  Y + I G C+     EA +LF  +  +   
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP 517

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LI+  C  G L+ A +L + +    ++ DVVTY+++I+ L    +  +A  L
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            L +  +   P  V ++TL+  C  N E   VV L+
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENC-SNIEFKSVVSLI 612



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++      PNV TY+ LI G C  G+  VAL  F+ M          C P+ V 
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKG------CLPNVVT 242

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG CK   +D   ELL  M  K + P++++YN VI G C      E   +  EM 
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   + VT++ ++   CK G   +A  +   M++ G+ P+   Y +L+   C  G +N
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA E    M   G   N  +Y+ L++G+ +   +  A  +  EM+  G  P+VVTYN L 
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     ++  A  + ++M+  G+  D  +Y T + G C++  + EAL + R +     +
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIK 482

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +YS LI G C+  R K A +LF  + R  L  D  TY  +I+A C +G + KA  L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL 542

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KGV PD V ++ L+ G  +   T +   LL ++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 202/403 (50%), Gaps = 21/403 (5%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EPN+I+Y+ +INGLCR G       +  EM N  G        D V Y T+I G CKE
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEM-NKRG-----YSLDEVTYNTLIKGYCKE 323

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  +  +M    ++P V+TY S+I   C A + N A     +M  +G+ PN  T+
Sbjct: 324 GNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTY 383

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D   + G M EA ++L+ MI  G  P+   YN L++G C+ G++  A  +   M+ 
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE 443

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V SYS +++G+C++ +++ AL +  +M++KGIKP  +TY++L  G  E  + + 
Sbjct: 444 KGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE 503

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LFDEM R G+  D + Y   I+  C  G + +A++L   +       D+ +YS LI+
Sbjct: 504 ACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLIN 563

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH---------------ALCADGKMDK 358
           GL K  R + A  L   L     +   VTY+ +I                  C  G M +
Sbjct: 564 GLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  +F  M  K   PD  A+N ++ G  R  +  K   L   M
Sbjct: 624 ADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 201/373 (53%), Gaps = 23/373 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +  ++   G  P+VITY++LI+ +C+ G+   A    ++M + G      +C P+ 
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG------LC-PNE 380

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTT++DG  ++G++++A  +L +M D   +P VVTYN++I G C A    +A  +  +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED 440

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P+VV++S ++   C++  ++EA ++   M+  G++P+   Y++L+ GFC   R
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +LF  M  +G   + F+Y+ LIN YC   +++ A+ L++EM+ KG+ P VVTY+ 
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGY 285
           L  GL +  +   A +L  ++           Y T I+               G C  G 
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA ++F ++     + D  +Y+ +I G C+ G ++ A+ L+  + +   +   VT   
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680

Query: 346 MIHALCADGKMDK 358
           ++  L  +GK+++
Sbjct: 681 LVKTLHKEGKVNE 693



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 196/395 (49%), Gaps = 7/395 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTI-VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +A G  P V++Y+ +++   R+   I  A N+F+EM+           P+   Y  +I G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQ------VSPNVFTYNILIRG 214

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C  G +D A     +M+ K   P+VVTYN++I G+C     ++   L   M  +G++PN
Sbjct: 215 FCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPN 274

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +++++V+++ LC+ G+M+E S +L  M + G   +   YNTL+ G+C  G  ++A  +  
Sbjct: 275 LISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   +V +Y+ LI+  CK   +  A     +M  +G+ P   TY TL  G  +  
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            +  A+++  EM  +G +     Y   I+G C  G +V+A+ +   ++      D+ SYS
Sbjct: 395 YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYS 454

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            ++ G C+S  +  A  +   +    +  D +TY+ +I   C   +  +A DLF +M   
Sbjct: 455 TVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV 514

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ PD   +  L+       +  K ++L + M E+
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEK 549



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 179/348 (51%), Gaps = 1/348 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NE 113
           +C   + ++  ++    +   +DKA  ++   +     P V++YN+V+     +  + + 
Sbjct: 129 LCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+ +F EM+   V PNV T+++++   C  G ++ A +  + M + G  PN   YNTL+D
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C   +++   EL  SM   G + N+ SY+++ING C+   ++    + +EM  +G   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             VTYNTL  G  +     +A  +  EM RHG++     Y + I  +CK G +  A E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +R+     + R+Y+ L+DG  + G +  A+ +   +        VVTYN +I+  C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           GKM  A  +  DM+ KG+ PD V+++T++ G  R+ +  + + +  +M
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM 476



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 135/252 (53%), Gaps = 21/252 (8%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A A+   +K  G  P+V++YST+++G CR+     AL +  +M+          KPD 
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG------IKPDT 485

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y+++I G C++    +A +L  +M    + PD  TY ++I  +C   D  +A +L  E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNE 545

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD------- 173
           M+++GV P+VVT+SV+++ L K  +  EA +LL  +      P+   Y+TL++       
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605

Query: 174 --------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
                   GFC+ G +  A ++F SM     K +  +Y+++I+G+C+  +I  A SLY E
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKE 665

Query: 226 MLSKGIKPTVVT 237
           M+  G     VT
Sbjct: 666 MVKSGFLLHTVT 677



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 9/161 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL-----FEEMINGNGEFGVVC 56
           +A  L  ++   G  P+V+TYS LINGL +   T  A  L     +EE +  +  +  + 
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597

Query: 57  KPDAVI----YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           +  + I      ++I G C +G + +A ++   M +KN  PD   YN +I G C   D  
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIR 657

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +A  L+ EM+  G   + VT   ++  L K GK+ E + ++
Sbjct: 658 KAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVI 698



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 1/155 (0%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE-LFRTLRILKCELDIRSYS 309
           +++A  +    Q HG      +Y   +D   ++   +   E +F+ +   +   ++ +Y+
Sbjct: 150 IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYN 209

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI G C +G L +A   F  + +   + +VVTYN +I   C   K+D   +L   M  K
Sbjct: 210 ILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALK 269

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ P+ +++N ++ G  R     ++  +L  M++R
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKR 304


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 211/401 (52%), Gaps = 7/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++ + G   NV+  +TL+ G C+ G    AL LF++M N NG    +C P+ 
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM-NENG----IC-PNN 364

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  II+  CK G +DKA E+  QMK+K+I+P V   NS+IRG+  A    EA +LF E
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE 424

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  G+  NV T++ ++  LCK GKM EA  + E M++ GVRP+   YN ++ G C  G 
Sbjct: 425 AVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGD 483

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +FV M   G K N+ +YS+L++GY K  + E A  LY  M  + I P+  T N 
Sbjct: 484 MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNI 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +   +     ++ + G       Y   IDG  K G +  AL ++  +  + 
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +Y+ LI+G CKS  + +A ++   +    +  DV  Y  +I   C  G M  A 
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +++  G++P+ V +++++ G  +       + L  RM
Sbjct: 664 QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 216/400 (54%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF +  A G   NV TY++L++ LC+ G    A +++E+M+      GV  +P  V
Sbjct: 417 EASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRK----GV--RPSVV 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C++G +D A  + ++M +K + P+++TY+ ++ G+    D+  A  L+  M
Sbjct: 470 SYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  T ++I++ LCK G+  E+   L+ ++Q G  P    YN ++DGF   G V
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  ++  M  +G   NVF+Y+ LING+CK+  ++ AL +  EM +KGI+  V  Y  L
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCAL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +  A +L  E+Q  G++ +   Y + I G  K   +  AL L + +     
Sbjct: 650 IDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D++ Y+ LI GL K G+L  A EL+  +    ++ D++TY+++IH LC  G+++ A  
Sbjct: 710 PCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK 769

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  DM+ K + P    +NTL+ G  +     +   L + M
Sbjct: 770 ILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 210/430 (48%), Gaps = 28/430 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------- 49
           A  LF K+   G  PN +TY+ +I   C+ G+   A  ++ +M N +             
Sbjct: 348 ALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407

Query: 50  --------------GEFGVVCK-PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
                          +  V C   +   Y +++  LCKEG + +A  +  +M  K + P 
Sbjct: 408 GYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPS 467

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           VV+YN++I G C   D + A  +F+EM+++G++PN++T+SV+MD   K G  E A  L +
Sbjct: 468 VVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYD 527

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M    + P+ F  N +++G C  GR + +++    +   G      +Y+ +I+G+ K  
Sbjct: 528 RMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEG 587

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            +  AL++Y+EM   G+ P V TY  L  G  + + ++ A K+ DEM+  G+  D   Y 
Sbjct: 588 SVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYC 647

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             IDG C+ G +V A +L   L+ +    +   YS +I G  K   ++ A  L   +   
Sbjct: 648 ALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINE 707

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            +  D+  Y  +I  L  +GK+  A +L+ +M AKG+ PD + ++ L+ G     +    
Sbjct: 708 GIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENA 767

Query: 395 VELLHRMDER 404
            ++L  MD +
Sbjct: 768 QKILEDMDRK 777



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +++ K+   G  P+V++Y+ +I G C+ G    A  +F EM+    E G+  KP+ +
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML----EKGL--KPNLI 504

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++DG  K+G  + A  L  +M+ +NI P   T N +I G C A  ++E++    ++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +T++ I+D   K G +  A  +   M +IGV PN F Y  L++GFC +  +
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M++ G + +V  Y  LI+G+C+  ++  A  L SE+   G+ P  V Y+++
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +E A  L   M   G+  D   Y T I GL K G ++ A EL+  +     
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS LI GLC  G+L+ A ++   + R  +   V  YN +I     +G + +A  
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           L  +M  KG+ PD   ++ L+ G +++
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKD 831



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           K D    + +I    +EG +++A+    + K+K +  D   Y+ VI   C   DS  A  
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM D+G  P+ V F+ ++    K GKM EA ++   M+  G   N  V  TLM G+C
Sbjct: 281 LLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC 340

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G ++ A ELF  M   G   N  +Y+++I   CKN  ++ A  +Y++M +K I PTV 
Sbjct: 341 KQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVF 400

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
             N+L  G  +    E A KLFDE    G+ A+ + Y + +  LCK G + EA  ++  +
Sbjct: 401 NVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKM 459

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                   + SY+ +I G C+ G +  A  +F  +    L  +++TY++++      G  
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + A  L+  M  + +AP     N ++ G  +   TS+  + L ++
Sbjct: 520 EYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 148/283 (52%), Gaps = 6/283 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+     KL   G  P  +TY+ +I+G  + G    AL ++ EM     + GV   P+  
Sbjct: 556 ESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC----KIGV--SPNVF 609

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+G CK   +D A +++ +MK+K I  DV  Y ++I GFC   D   A +L  E+
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN V +S ++    K   ME A  L + MI  G+  +  +Y TL+ G    G++
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL+  M + G   ++ +YS+LI+G C   ++E A  +  +M  K + PTV  YNTL
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTL 789

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             G F+   ++ AF+L +EM   G+  D   Y   ++G  K+G
Sbjct: 790 ITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 193/404 (47%), Gaps = 11/404 (2%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A L    +    E +   ++ L+N   +T     A++ F  +I    E  +V  P   + 
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLI----EKDIV--PCLTVM 192

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
              +  L K   + +A+++  +M  K +  D  T + +IR         EA+  F E  +
Sbjct: 193 NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN 252

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-TGRVN 182
           +GV+ +   +S++++ +CK      A  LL  M   G  P+  ++  ++ G C+  G++ 
Sbjct: 253 KGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKML 311

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M S G   NV   + L+ GYCK  +++ AL L+ +M   GI P  VTY  + 
Sbjct: 312 EAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVII 371

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +   +++A++++++M+   ++   +   + I G  K     EA +LF     + C 
Sbjct: 372 EWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD--EAVACG 429

Query: 303 L-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y+ L+  LCK G++  A  ++  + R  +   VV+YN MI   C  G MD A+ 
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +F++M  KG+ P+ + ++ LM G  +  +T     L  RM   N
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN 533



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 1   MEAA-ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           MEAA  L  ++   G   ++  Y+TLI+GL + G  + A  L+ EM+      G++  PD
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK----GIM--PD 747

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y+ +I GLC +G ++ A+++L  M  K + P V  YN++I G     +  EA RL  
Sbjct: 748 LITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHN 807

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKM 146
           EM+D+G+ P+  T+ ++++   K+G +
Sbjct: 808 EMLDKGLVPDDTTYDILVNGKVKDGNL 834


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 212/400 (53%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+K  GC PNV TY+ LI+GL R G   VA+ ++ +M+      G+V  P AV
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD----GLV--PTAV 378

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+ L  EG  + A  +   M   +  P+  TYN +I+GFC      +A  +F +M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+T+++I+    K G M  A +LLE+M   G++ + + Y  L+ GF   G++
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   NV +Y+ +INGY    +++ AL+L+ +M+  G  P+  TYN +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + +++  A     +M + G+  +   Y +FIDGLCKNG    A ++F  ++    
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LIDGLC+ G+ + A  L   L  G    +V TY  ++  LC  G+  +A  
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDAERL---LDDGCE-PNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+ KG+ P    +  L++G  +N E    +++   M
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +  +G  P+  TY++LI G C+ G+  +A  +F+ M+         C P++V
Sbjct: 220 EAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG------CDPNSV 273

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLC EG +++A ++L +M DK I P V  Y   I   C A  S EA +L  +M
Sbjct: 274 TYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKM 333

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNV T++ ++  L ++GK E A  +   M+  G+ P A  Y+ L++   + GR 
Sbjct: 334 KKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRF 393

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M S     N  +Y+++I G+C    I+ A +++ +ML  G  P V+TYN +
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+   +  A +L + M+ +G+  DTW Y   I G  + G +  A  LF  +     
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ +I+G     ++  A  LF  +     +    TYN+MI       ++ +A +
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               M  +G+ P+ + + + + G  +N  TS   ++ H M +R+
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 205/437 (46%), Gaps = 45/437 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   GC+PN +TYS LINGLC  G    A+++ EEMI+   E      P    
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIE------PTVHA 309

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT  I  LC  G   +A +LL +MK +   P+V TY ++I G         A  ++ +M+
Sbjct: 310 YTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKML 369

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P  VT+S ++++L   G+ E A  + E M+     PN   YN ++ GFC  G + 
Sbjct: 370 ADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQ 429

Query: 183 RAKELFVSMESMGCKHNVFSYSI-----------------------------------LI 207
           +A  +F  M   G   NV +Y+I                                   LI
Sbjct: 430 KATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLI 489

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G+ +  ++E A SL++EM+  GI P VVTYN +  G   + +V+ A  LF +M   G  
Sbjct: 490 SGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV 549

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             +  Y   I G  K   I EA      +       ++ +Y+  IDGLCK+GR  +A+++
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKI 609

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           FH + +     ++ TY+ +I  LC +G+ + A  L  D    G  P+   + TL+ G   
Sbjct: 610 FHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCG 665

Query: 388 NNETSKVVELLHRMDER 404
                +  +L+  M ++
Sbjct: 666 KGRCYEADQLVESMKKK 682



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 188/388 (48%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+ T++ +I  LC  G    A     E+I G+      C PD   YT++I G CK 
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEA-----ELIMGHIFHYGAC-PDTFTYTSLIIGHCKN 250

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A E+  +M     +P+ VTY+++I G C      EA  +  EM+D+G++P V  +
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++ +  LC  G+  EA +LL  M + G  PN   Y  L+ G    G+   A  ++  M +
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G      +YS LIN        E AL+++  MLS    P   TYN +  G   I  +++
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +FD+M + G + +   Y   I    K GY+  A+ L   ++    +LD  +Y+ LI 
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G  + G+L+ A+ LF+ +    +  +VVTYN +I+      K+D A  LF  M   G  P
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +N ++ G  + N  S+      +M
Sbjct: 551 SSGTYNMMISGFSKTNRISEAENFCGKM 578



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 190/368 (51%), Gaps = 10/368 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+F ++   G  PNVITY+ +I+   + G+   A+ L E M+ GNG      K D  
Sbjct: 430 KATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE-MMKGNG-----LKLDTW 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G  + G ++ A  L  +M +  I+P+VVTYN++I G+      ++A  LF +M
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  T+++++    K  ++ EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRT 603

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++F  M+      N+ +YS LI+G C+  + E A      +L  G +P V TY TL
Sbjct: 604 SLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTL 659

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +   A +L + M++ G+      YR  + G CKN  +  AL++F ++     
Sbjct: 660 VRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGF 719

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  +  Y  LI  LCK+   + A  +F ++ +    +D V + +++  L  +G+ D + +
Sbjct: 720 QPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLE 779

Query: 362 LFLDMEAK 369
           L   ME++
Sbjct: 780 LLHVMESR 787



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 155/306 (50%), Gaps = 10/306 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +LF ++   G  PNV+TY+ +ING         AL LF +M+    E G V  P + 
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV----ESGNV--PSSG 553

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G  K   + +A+    +M  + + P+V+TY S I G C    ++ A ++F EM
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   PN+ T+S ++D LC+ G+ E+A +LL+     G  PN   Y TL+ G C  GR 
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRC 669

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L  SM+  G + +   Y  L+ G CKN E+E AL ++  M++ G +P +  Y  L
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKAL 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L + +  ++A  +F  M +    +D   +   +DGL K G    +LEL   +    C
Sbjct: 730 ICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNC 789

Query: 302 ELDIRS 307
            L+ ++
Sbjct: 790 TLNFQT 795



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 146/288 (50%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
            + ++IEM++ G++PN+ TF+ ++  LC  GK++EA  ++  +   G  P+ F Y +L+ 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G ++ A E+F  M   GC  N  +YS LING C    +E A+ +  EM+ KGI+P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           TV  Y    + L +  +   A KL  +M++ G   +   Y   I GL ++G    A+ ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             +          +YS LI+ L   GR + A  +F  +     + +  TYN++I   C+ 
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G + KA  +F  M   G +P+ + +N ++    +    +  + LL  M
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM 473



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 118/226 (52%), Gaps = 12/226 (5%)

Query: 188 FVSMESMGCKHNVF----SYSILINGYCKNK-EIEGALSLYSEM-LSKGIKPTVVTYNTL 241
           FVSM +   +  +F    +  IL+   C+N+ E++  + + SE+  +     T+ +++TL
Sbjct: 114 FVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTL 173

Query: 242 FI--GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA-LELFRTLRI 298
            I  G F++  + R   ++ EM   G+  + + +   I  LC  G + EA L +      
Sbjct: 174 LIQLGKFDMDGLGR--DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHY 231

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C  D  +Y+ LI G CK+G L +A+E+F  + +     + VTY+ +I+ LC++G++++
Sbjct: 232 GACP-DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A D+  +M  KG+ P   A+   ++       + + V+LL +M +R
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKR 336



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 9/160 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +K  G +P+   Y  L+ G C+      AL +F+ M+    +    C  D  
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ---PCLSD-- 725

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCK  F  KA+ +   M  K+ N D V +  ++ G     +++ +  L   M
Sbjct: 726 -YKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
             +    N  T  ++  EL   G   E  Q+ +   Q+G+
Sbjct: 785 ESRNCTLNFQTRVMLARELSALGCSIEIPQISK---QLGI 821


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 210/404 (51%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A + F  +      P VI ++ +++      H   A++L   + + G        +PD 
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKG-------IQPDF 105

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
                +++  C  G ++    +L ++  +   P  +T+ ++I+G C     N+A     +
Sbjct: 106 FTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDK 165

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG++ + V++  +++ +CK G    A +L+  +     +PN  +YNT++D  C    
Sbjct: 166 LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQL 225

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  LF  M + G   NV SY+I+I G+CK+K ++ AL+L+ EM  K + PT+VTY +
Sbjct: 226 VSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGS 285

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++   ++L DEM   G+ AD   Y + IDGLCKNG++  A+ LF  ++  +
Sbjct: 286 LMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXR 345

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +++ L+DGLCK GRLK A E+F  L       DV  YN+MI+  C  G +++A 
Sbjct: 346 --FDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEAL 403

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   ME  G  P  V F  ++      +E  K  +LLH M  R
Sbjct: 404 TMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIAR 447



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 188/369 (50%), Gaps = 8/369 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +L+  G +P+  T + L+N  C  G      ++  +++    +      P  + 
Sbjct: 89  AVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQ------PHTIT 142

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+I GLC +G V+KA     ++  + I  D V+Y ++I G C   D+  A +L  ++ 
Sbjct: 143 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 202

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  ++ I+D LCK   + EA  L   M   G+  N   YN ++ GFC +  V+
Sbjct: 203 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVD 262

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M        + +Y  L++G CK+  I     L  EM  +GI   V+TYN+L 
Sbjct: 263 EALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLI 322

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   ++RA  LF++M+      D   +   +DGLCK G + +A E+F+ L   + +
Sbjct: 323 DGLCKNGHLDRAIALFNKMK--DXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYD 380

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD+  Y+ +I+G CK G L+ A  +   +     I   VT+ I+I+AL    + DKA  L
Sbjct: 381 LDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKL 440

Query: 363 FLDMEAKGV 371
             +M A+G+
Sbjct: 441 LHEMIARGL 449



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 140/292 (47%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A   F  M+     P V+ F+ I+D          A  L   +   G++P+ F  N L
Sbjct: 52  DDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNIL 111

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           M+ FC  G++N    +   +   G + +  +++ LI G C   ++  AL  + ++L++GI
Sbjct: 112 MNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 171

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K   V+Y TL  G+ +I     A KL  ++       +   Y T ID LCK   + EA  
Sbjct: 172 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 231

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +       ++ SY+ +I G CKS  +  A  LF  + +  ++  +VTY  ++  LC
Sbjct: 232 LFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLC 291

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G++    +L  +M  +G+  D + +N+L+ G  +N    + + L ++M +
Sbjct: 292 KSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKD 343



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A   F SM  M     V  ++ +++ +   K    A+SL   +  KGI+P   T N 
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L      + Q+   F +  ++ + G    T  + T I GLC  G + +AL     L    
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  SY  LI+G+CK G  + A +L   +   +   +V  YN +I ALC    + +A+
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            LF +M AKG++ + V++N ++ G  ++    + + L   M ++N
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKN 275


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 206/399 (51%), Gaps = 9/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + E+M +G+G     C  +  +   
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHG-----CAANTTLCNI 325

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A + L  M     +PD ++Y +V++G C A    +AK L  EM+ + 
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A+ L+E M + G   N   YN L++GFC+ GRV+ A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF SM    CK N  +Y+ L+ G C  + ++ A  L +EML K   P VVT+N L    
Sbjct: 446 ELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A +L ++M  HG   +   Y T +DG+  +    EALEL   L       DI
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS +I  L +  R++ A ++FH +    +    V YN ++ ALC     D A D F  
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M + G  P+ + + TL+ G    +   +  +LL  +  R
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSR 661



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  +  + G  P+V   + LI  LCR G T  A  +                 D  
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV------DVF 114

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G C+ G +D A+ L+  M    + PD  TY  +IRG C      EA  L  +M
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VVT++V+++ +CK+    +A ++L+ M   G  PN   YN +++G C  GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P  VT++ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +    C
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY+ ++ GLC++ R + A EL   + R     + VT+N  I  LC  G +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G   + V +N L+ G          +EL + M
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 200/437 (45%), Gaps = 47/437 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR G    A  L   M            PDA 
Sbjct: 96  DAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---------PVAPDAY 146

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II GLC  G V +A  LL  M  +   P VVTY  ++   C +    +A  +  EM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
             +G  PN+VT++VI++ +C+ G++++A + L  +   G +P+   Y T++ G       
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 175 ----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                       FC  G V RA ++   M   GC  N    +I+
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK   ++ A    + M S G  P  ++Y T+  GL    + E A +L  EM R   
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   + TFI  LC+ G I +A  L   +    CE++I +Y+ L++G C  GR+  A E
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF+S+P      + +TY  ++  LC   ++D A +L  +M  K  AP+ V FN L+    
Sbjct: 447 LFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 387 RNNETSKVVELLHRMDE 403
           +     + +EL+ +M E
Sbjct: 504 QKGLMDEAIELVEQMME 520



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 171/336 (50%), Gaps = 10/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + ++GC P+ I+Y+T++ GLCR      A  L +EM+  N      C P+ V
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN------CPPNEV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I  LC++G +++A  L+ QM +     ++VTYN+++ GFC     + A  LF  M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN +T++ ++  LC   +++ A++LL  M+Q    PN   +N L+  FC  G +
Sbjct: 452 ---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   GC  N+ +Y+ L++G   +   E AL L   ++S G+ P +VTY+++
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSI 568

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +VE A K+F  +Q  G+      Y   +  LCK      A++ F  +    C
Sbjct: 569 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 628

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y  LI+GL     LK   +L   L  RGVL
Sbjct: 629 MPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 38/342 (11%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+ +R     +D  EA RL      +G  P+V   + ++  LC+ G+  +A+++L    +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G   + F YNTL+ G+C  G+++ A+ L  SM       + ++Y+ +I G C    +  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           ALSL  +ML +G +P+VVTY  L   + +     +A ++ DEM+  G   +   Y   I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF------HSLP 332
           G+C+ G + +A E    L     + D  SY+ ++ GLC + R +   ELF      + +P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 333 -------------RGVLI----------------ADVVTYNIMIHALCADGKMDKAHDLF 363
                        RG ++                A+    NI+I+ +C  G++D A    
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +M + G +PD +++ T++ G  R        ELL  M  +N
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 208/397 (52%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +++  G +PNV T++  I  L R G    A  + + M +        C PD V YT
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 297

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +ID LC    +D AKE+  +MK     PD VTY +++  F    D +  K+ + EM   
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VVTF++++D LCK G   EA   L++M   G+ PN   YNTL+ G     R++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ELF +MES+G K   ++Y + I+ Y K+ +   AL  + +M +KGI P +V  N     
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  +   A ++F  ++  G+  D+  Y   +    K G I EA++L   +    CE D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LI+ L K+ R+  AW++F  +    L   VVTYN ++  L  +GK+ +A +LF 
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M  KG  P+ + FNTL     +N+E +  +++L +M
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 200/402 (49%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K++ FG   N  +Y+ LI+ L ++     A+ ++  MI          +P   
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQ 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++++ GL K   +D    LL +M+   + P+V T+   IR    A   NEA  +   M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VVT++V++D LC   K++ A ++ E M     +P+   Y TL+D F     +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  K+ +  ME  G   +V +++IL++  CK      A      M  +GI P + TYNTL
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +H+++ A +LF  M+  GV    + Y  FID   K+G  V ALE F  ++    
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L K+GR + A ++F+ L    L+ D VTYN+M+      G++D+A  
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M   G  PD +  N+L+    + +   +  ++  RM E
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 202/421 (47%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   GC P+V+TY+ LI+ LC       A  +FE+M  G        KPD V
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH------KPDRV 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++D       +D  K+   +M+     PDVVT+  ++   C A +  EA      M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-------- 173
            DQG+ PN+ T++ ++  L +  ++++A +L   M  +GV+P A+ Y   +D        
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449

Query: 174 ---------------------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                           GR   AK++F  ++ +G   +  +Y+++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  Y K  EI+ A+ L SEM+  G +P V+  N+L   L++  +V+ A+K+F  M+   +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y T + GL KNG I EA+ELF  +    C  +  +++ L D LCK+  + +A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +     + DV TYN +I  L  +G++ +A   F  M+ K V PD V   TL+ G +
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVV 688

Query: 387 R 387
           +
Sbjct: 689 K 689



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 177/344 (51%), Gaps = 9/344 (2%)

Query: 3    AAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF K  K  G +P + TY+ LI GL       +A ++F + +   G     C PD  
Sbjct: 768  ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ-VKSTG-----CIPDVA 821

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++D   K G +D+  EL  +M       + +T+N VI G   A + ++A  L+ ++
Sbjct: 822  TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881

Query: 122  M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M D+   P   T+  ++D L K+G++ EA QL E M+  G RPN  +YN L++GF   G 
Sbjct: 882  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             + A  LF  M   G + ++ +YS+L++  C    ++  L  + E+   G+ P VV YN 
Sbjct: 942  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 241  LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  GL + H++E A  LF+EM+   G+  D + Y + I  L   G + EA +++  ++  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 300  KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
              E ++ +++ LI G   SG+ + A+ ++ ++  G    +  TY
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 46/444 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A   F K+K  G  PN++  +  +  L + G    A  +F     G  + G+V  PD+
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY----GLKDIGLV--PDS 503

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++    K G +D+A +LL +M +    PDV+  NS+I     A+  +EA ++F+ 
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +  ++P VVT++ ++  L KNGK++EA +L E M+Q G  PN   +NTL D  C    
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++   M  MGC  +VF+Y+ +I G  KN +++ A+  + +M  K + P  VT  T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 682

Query: 241 LFIGLFEIHQVERAFK---------------LFDE------MQRHGVA-ADTWAYRTFID 278
           L  G+ +   +E A+K               LF E      +   G+  A +++ R   +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742

Query: 279 GLCKNG---------------YIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLK 322
           G+C++G                +  A  LF    + L  +  + +Y+ LI GL ++  ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           IA ++F  +     I DV TYN ++ A    GK+D+  +L+ +M       + +  N ++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862

Query: 383 LGCIRNNETSKVVELLHR-MDERN 405
            G ++       ++L +  M +R+
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRD 886



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 24/383 (6%)

Query: 18   NVITYST--LINGLCRTGHTIV---------------ALNLFEEMINGNGEFGVVCKPDA 60
            N +++S   + NG+CR G +I+               A  LFE+      + GV  +P  
Sbjct: 731  NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKL 785

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  +I GL +   ++ A+++ LQ+K     PDV TYN ++  +  +   +E   L+ E
Sbjct: 786  PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M     + N +T ++++  L K G +++A  L  +LM      P A  Y  L+DG   +G
Sbjct: 846  MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905

Query: 180  RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            R+  AK+LF  M   GC+ N   Y+ILING+ K  E + A +L+  M+ +G++P + TY+
Sbjct: 906  RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             L   L  + +V+     F E++  G+  D   Y   I+GL K+  + EAL LF  ++  
Sbjct: 966  VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025

Query: 300  K-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    D+ +Y+ LI  L  +G ++ A ++++ + R  L  +V T+N +I      GK + 
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085

Query: 359  AHDLFLDMEAKGVAPDCVAFNTL 381
            A+ ++  M   G +P+   +  L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 48/440 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF  +   GC PN IT++TL + LC+     +AL +  +M++      + C PD  
Sbjct: 591  EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD------MGCVPDVF 644

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA------------- 108
             Y TII GL K G V +A     QMK K + PD VT  +++ G   A             
Sbjct: 645  TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703

Query: 109  --NDSNEAKRLFIE------MMDQGVQPNVVTFS-----------------VIMDELCKN 143
              N +++   LF E      + + G+  N V+FS                  I+   CK+
Sbjct: 704  LYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKH 762

Query: 144  GKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
              +  A  L E   + +GV+P    YN L+ G      +  A+++F+ ++S GC  +V +
Sbjct: 763  NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822

Query: 203  YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-DEM 261
            Y+ L++ Y K+ +I+    LY EM +   +   +T+N +  GL +   V+ A  L+ D M
Sbjct: 823  YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882

Query: 262  QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
                 +     Y   IDGL K+G + EA +LF  +    C  +   Y+ LI+G  K+G  
Sbjct: 883  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942

Query: 322  KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
              A  LF  + +  +  D+ TY++++  LC  G++D+    F +++  G+ PD V +N +
Sbjct: 943  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002

Query: 382  MLGCIRNNETSKVVELLHRM 401
            + G  +++   + + L + M
Sbjct: 1003 INGLGKSHRLEEALVLFNEM 1022



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 47/421 (11%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  +  K+   GC P+V TY+T+I GL + G    A+  F +M         +  PD V 
Sbjct: 627  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 679

Query: 63   YTTIIDGLCKEGFVDKAKEL----LLQMKDKNIN----------------PDVVTYN--- 99
              T++ G+ K   ++ A ++    L    D+  N                 + V+++   
Sbjct: 680  LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739

Query: 100  --------------SVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNG 144
                           +IR  C  N+ + A+ LF +   D GVQP + T+++++  L +  
Sbjct: 740  VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +E A  +   +   G  P+   YN L+D +  +G+++   EL+  M +  C+ N  +++
Sbjct: 800  MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859

Query: 205  ILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            I+I+G  K   ++ AL LY +++S +   PT  TY  L  GL +  ++  A +LF+ M  
Sbjct: 860  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            +G   +   Y   I+G  K G    A  LF+ +       D+++YS L+D LC  GR+  
Sbjct: 920  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979

Query: 324  AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME-AKGVAPDCVAFNTLM 382
                F  L    L  DVV YN++I+ L    ++++A  LF +M+ ++G+ PD   +N+L+
Sbjct: 980  GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039

Query: 383  L 383
            L
Sbjct: 1040 L 1040



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 9/347 (2%)

Query: 42   FEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNS 100
            F E +  NG    +C+    I   II   CK   V  A+ L  +  KD  + P + TYN 
Sbjct: 735  FSERLVANG----ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790

Query: 101  VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
            +I G   A+    A+ +F+++   G  P+V T++ ++D   K+GK++E  +L + M    
Sbjct: 791  LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850

Query: 161  VRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGA 219
               N   +N ++ G    G V+ A +L+   M          +Y  LI+G  K+  +  A
Sbjct: 851  CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910

Query: 220  LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
              L+  ML  G +P    YN L  G  +  + + A  LF  M + GV  D   Y   +D 
Sbjct: 911  KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970

Query: 280  LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLI 337
            LC  G + E L  F+ L+      D+  Y+ +I+GL KS RL+ A  LF+ +   RG+  
Sbjct: 971  LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI-T 1029

Query: 338  ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             D+ TYN +I  L   G +++A  ++ +++  G+ P+   FN L+ G
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 174/381 (45%), Gaps = 11/381 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-----------GVVCKP 58
           LK+F    +  +Y   + G     HT    N   E +  +G+              + K 
Sbjct: 92  LKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR 151

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y TI   L  +G + +A   L +M++     +  +YN +I     +    EA  ++
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+ +G +P++ T+S +M  L K   ++    LL+ M  +G++PN + +   +      
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++N A E+   M+  GC  +V +Y++LI+  C  ++++ A  ++ +M +   KP  VTY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL     +   ++   + + EM++ G   D   +   +D LCK G   EA +    +R 
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +Y+ LI GL +  RL  A ELF ++    +     TY + I      G    
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451

Query: 359 AHDLFLDMEAKGVAPDCVAFN 379
           A + F  M+ KG+AP+ VA N
Sbjct: 452 ALETFEKMKTKGIAPNIVACN 472



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            P   TY  LI+GL ++G    A  LFE M+    ++G  C+P+  IY  +I+G  K G  
Sbjct: 889  PTACTYGPLIDGLSKSGRLYEAKQLFEGML----DYG--CRPNCAIYNILINGFGKAGEA 942

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            D A  L  +M  + + PD+ TY+ ++   C     +E    F E+ + G+ P+VV +++I
Sbjct: 943  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002

Query: 137  MDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++ L K+ ++EEA  L  E+    G+ P+ + YN+L+    + G V  A +++  ++  G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062

Query: 196  CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             + NVF+++ LI GY  + + E A ++Y  M++ G  P   TY  L
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 7/208 (3%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF  +  +GC PN   Y+ LING  + G    A  LF+ M+    + GV  +PD  
Sbjct: 909  EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLK 962

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y+ ++D LC  G VD+      ++K+  +NPDVV YN +I G   ++   EA  LF EM
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 122  -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               +G+ P++ T++ ++  L   G +EEA ++   + + G+ PN F +N L+ G+ L+G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILIN 208
               A  ++ +M + G   N  +Y  L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 206/400 (51%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ A G  P+  T++  +   C TG   VAL L   +     E G   KP A 
Sbjct: 124 QAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL----SERGCDAKPAA- 178

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G    A+ L  +M  +++ PDV T+N+V+   C   D  E+  L  ++
Sbjct: 179 -YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKV 237

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  N  T ++ +  LC++G++EEA  L+E M    V P+   YNTLM G C   +V
Sbjct: 238 LKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKV 296

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +    M + GC  + F+Y+ +I+GYCK+  ++ A  L  + + KG  P  VTY +L
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +ERA +LF+E Q   +  D   Y + + GLC+ G I+ AL++   +    C
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ +I+GLCK G +  A  + +       + DV T+N +I   C   K+D A  
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G+APD + +N+++ G  +  +  +V E    M
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 208/399 (52%), Gaps = 7/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   L   GC+     Y T++ GL   GH   A +LF+EM+ G   F     PD   
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEML-GRDVF-----PDVAT 213

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++  LC++G V ++  LL ++  + ++ +  T N  IRG C      EA  L +E M
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL-VERM 272

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+VVT++ +M  LCK+ K++EA+Q L  M+  G  P+ F YNT++DG+C +G + 
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL       G   +  +Y  LING C   +IE AL L++E  +K +KP +V YN+L 
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     +  A ++ +EM   G   D W Y   I+GLCK G I +A  +     +    
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +++ LIDG CK  +L  A +L   +    +  DV+TYN +++ LC  GK  + ++ 
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F +M  KG  P+ + +N L+    + N+  +   ++ RM
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 200/382 (52%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME+ AL  K+   G   N  T +  I GLC  G    A+ L E M       G    PD 
Sbjct: 228 MESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-------GAYVAPDV 280

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ GLCK+  V +A + L +M ++   PD  TYN++I G+C +    EA  L  +
Sbjct: 281 VTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD 340

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ VT+  +++ LC  G +E A +L        ++P+  VYN+L+ G C  G 
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 400

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   M   GC  ++++Y+I+ING CK   I  A  + ++ + KG  P V T+NT
Sbjct: 401 ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A D   Y + ++GLCK G   E  E F  + +  
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +Y+ LI+  CK  +L+ A  +   + +  L+ D V++N +IH  C +G +D A+
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY 580

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            LF  ++ KG +     FN L+
Sbjct: 581 LLFQKLDEKGYSATADTFNILI 602



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 215/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA    ++   GC P+  TY+T+I+G C++G    A  L ++ +      G V  PD V
Sbjct: 298 EAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFK----GFV--PDRV 351

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC EG +++A EL  + + K++ PD+V YNS+++G C       A ++  EM
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P++ T+++I++ LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M + G   +V +Y+ ++NG CK  + +     + EM+ KG +P  +TYN L
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +I+Q+E A  +   M + G+  D  ++ T I G C+NG +  A  LF+ L     
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ LI        +++A ++F  +       D+ TY I++  LC    +D+A+ 
Sbjct: 592 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYA 651

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +M +KG  P    F  ++     N+  S+ V ++H M
Sbjct: 652 HLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 202/402 (50%), Gaps = 11/402 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ A+   P+V+TY+TL+ GLC+      A      M+N        C PD  
Sbjct: 264 EAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG------CIPDDF 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIIDG CK G + +A ELL     K   PD VTY S+I G C   D   A  LF E 
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P++V ++ ++  LC+ G +  A Q++  M++ G  P+ + YN +++G C  G +
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +       G   +VF+++ LI+GYCK  +++ AL L   M + GI P V+TYN++
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + +   + F+EM   G   +   Y   I+  CK   + EA  +   +R+ + 
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI--VRMCQD 554

Query: 302 EL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L  D  S++ LI G C++G L  A+ LF  L      A   T+NI+I A  +   M  A
Sbjct: 555 GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 614

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +F +M +KG  PD   +  L+ G  +     +    L  M
Sbjct: 615 EKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEM 656



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 190/397 (47%), Gaps = 11/397 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F ++  F C P    Y+ +++ L    +   A  ++  M+      GV   PDA  +T  
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA----GVA--PDARTHTVR 147

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           +   C  G    A  LL  + ++  +     Y +V+RG         A+ LF EM+ + V
Sbjct: 148 LKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDV 207

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+V TF+ ++  LC+ G + E+  LL  +++ G+  N F  N  + G C  GR+  A  
Sbjct: 208 FPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVA 267

Query: 187 LFVSMESMGC--KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           L   +E MG     +V +Y+ L+ G CK+ +++ A      M+++G  P   TYNT+  G
Sbjct: 268 L---VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG 324

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +   ++ A +L  +    G   D   Y + I+GLC  G I  ALELF   +    + D
Sbjct: 325 YCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y+ L+ GLC+ G +  A ++ + +       D+ TYNI+I+ LC  G +  A  +  
Sbjct: 385 LVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMN 444

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   KG  PD   FNTL+ G  +  +    ++L+ RM
Sbjct: 445 DAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 481



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 21/330 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGH-TIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           GC P++ TY+ +INGLC+ G+ +  A+ + + ++ G         PD   + T+IDG CK
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY-------LPDVFTFNTLIDGYCK 467

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              +D A +L+ +M    I PDV+TYNSV+ G C A  + E    F EM+ +G +PN +T
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++++++  CK  ++EEAS ++  M Q G+ P+A  +NTL+ GFC  G ++ A  LF  ++
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G      +++ILI  Y     ++ A  ++ EM+SKG KP + TY  L  GL +   V+
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVD 647

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-----------RILKC 301
           RA+    EM   G       +   ++ L  N  + EA+ +   +            IL  
Sbjct: 648 RAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILST 707

Query: 302 E-LDIRSYSCLIDGLCKSGRLKI-AWELFH 329
           +  +I +   L++ L K G +   A+E+ H
Sbjct: 708 DKKEIAAPKILVEELMKKGHISYRAYEVLH 737



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 170/348 (48%), Gaps = 3/348 (0%)

Query: 58  PDAV--IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           PD++  +Y   I    + G +  A +   +M      P    YN+++     A   ++A 
Sbjct: 67  PDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAH 126

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           ++++ M+  GV P+  T +V +   C  G+   A +LL  + + G       Y T++ G 
Sbjct: 127 KVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGL 186

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
              G    A+ LF  M       +V +++ +++  C+  ++  + +L +++L +G+    
Sbjct: 187 YAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANK 246

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T N    GL E  ++E A  L + M  + VA D   Y T + GLCK+  + EA +    
Sbjct: 247 FTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGR 305

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  D  +Y+ +IDG CKSG L+ A EL         + D VTY  +I+ LCA+G 
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +++A +LF + +AK + PD V +N+L+ G  R       +++++ M E
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 413



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 155/345 (44%), Gaps = 4/345 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT--YNSVIRGFCYANDSNEAKRLFIE 120
           Y  +I  L   G +D     L   +  ++ PD +   Y + I+ +  A     A   F  
Sbjct: 38  YRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P    ++ IMD L      ++A ++   M+  GV P+A  +   +  FCLTGR
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L  S+   GC     +Y  ++ G   +     A  L+ EML + + P V T+N 
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +   V  +  L  ++ + G++A+ +    +I GLC++G + EA+ L   +    
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYV 276

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ L+ GLCK  +++ A +    +     I D  TYN +I   C  G + +A 
Sbjct: 277 AP-DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +L  D   KG  PD V + +L+ G     +  + +EL +    ++
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 203/381 (53%), Gaps = 9/381 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ T++T+I+GLCR G    A ++ +++      +G+   P    Y ++IDG CK+G  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDI----KAWGLA--PSVATYNSLIDGYCKKGGA 242

Query: 77  DKAKE---LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
                   LL +M +  I+P  VT+  +I G+C  +++  A R+F EM  QG+  +VVT+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  GK+EE  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              + +V  Y+ILI+GY +  ++E A+++   M  KGI P V TYN L  G         
Sbjct: 363 RNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L DEM+  G+ AD   Y   I  LC  G + +A++L   +  +  E +  +Y+ +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A+DL  +M  K + P
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 374 DCVAFNTLMLGCIRNNETSKV 394
           + + + T+  G +    T  +
Sbjct: 543 NGITYETIKEGMMEKGYTPDI 563



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 182/362 (50%), Gaps = 14/362 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN---LFEEMINGNGEFGVVCKP 58
           +A  +   +KA+G  P+V TY++LI+G C+ G      +   L +EM+    E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            AV +  +I+G CK      A  +  +MK + I   VVTYNS+I G C      E  +L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN +TF  ++   CK G M +A+  ++ M +  V P+  +Y  L+DG+   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRL 382

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+  VVTY
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +   ++ +Y+  I   C+ G++  A +L + +    L+ + +TY  +      +G M+K
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEK 557

Query: 359 AH 360
            +
Sbjct: 558 GY 559



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 169/357 (47%), Gaps = 3/357 (0%)

Query: 50  GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN 109
           GE     +P       ++ GL     VD A++       + ++PD+ T+N+VI G C   
Sbjct: 146 GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIG 205

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG---KMEEASQLLELMIQIGVRPNAF 166
              +A  +  ++   G+ P+V T++ ++D  CK G    M     LL+ M++ G+ P A 
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV 265

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            +  L++G+C       A  +F  M+  G   +V +Y+ LI+G C   ++E  + L  EM
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              G+ P  +T+  +  G  +   +  A    D M    V  D   Y   IDG  + G +
Sbjct: 326 EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKM 385

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A+ +   +       ++ +Y+CLI G  +SG  + A  L   +    + ADVVTYN++
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           I ALC  G++ KA  L  +M   G+ P+ + +NT++ G           E+  RM++
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 142/284 (50%), Gaps = 9/284 (3%)

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +P+  + + ++  L    +++ A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPTVVTYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI PT VT+  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E ++L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  ++ C++ G CK G +  A +    +    +  DVV Y I+I      GKM+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  KG++P+   +N L+ G  R+ +      LL  M E+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 6/192 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+   +   G  PNV TY+ LI G  R+G    A  L +EM     E G+  + D V
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM----KEKGI--EADVV 440

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC +G V KA +LL +M +  + P+ +TYN++I+GFC   +   A  +   M
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                + NVVT++V +   C+ GKM+EA+ LL  M+   + PN   Y T+ +G    G  
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560

Query: 182 NRAKELFVSMES 193
              +   VS  S
Sbjct: 561 PDIRGCTVSQAS 572



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 183 RAKELFVSMESMGCKHNVFSYSI--LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           RA + F+       +H   + S+  L+ G    K ++ A   +   L + + P + T+NT
Sbjct: 137 RAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNT 196

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL  I Q+ +A  +  +++  G+A     Y + IDG CK G    A  ++    +LK
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLK 253

Query: 301 --CELDIR----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
              E  I     ++  LI+G CK+     A  +F  + +  + A VVTYN +I  LC++G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+++   L  +ME  G++P+ + F  ++ G  +    +   + +  M ERN
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G EP+ +TY+T ++GLC+ GH   AL + + M+    +      PD   Y T+I+ L 
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLS 348

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K G +D+AK ++ QM D+   PD  T+N++I      N   EA  L  E+  +G+ P+V 
Sbjct: 349 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVY 408

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+++++ LCK G      +L E M   G  P+   YN L+D  C  G++  A +L   M
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           ES GC  +  +Y+ +I+  CK   IE A  ++ +M ++GI  + VT+NTL  GL +  ++
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRI 528

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A +L ++M + G+  +   Y + +   CK G I +A ++  T+     E+D+ +Y  L
Sbjct: 529 DDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTL 588

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I+GLCK+GR ++A +L   +    +      YN +I +L     +  A +LF +M   G 
Sbjct: 589 INGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGE 648

Query: 372 APDCVAF 378
            PD + +
Sbjct: 649 PPDALTY 655



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 8/402 (1%)

Query: 4   AALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AAL  K K    GC P  +T + LING C+ G    AL   ++ I    E      PD V
Sbjct: 250 AALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE------PDQV 303

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T + GLC+ G V  A +++  M  +  +PDV TYN+VI       + +EAK +  +M
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+  TF+ ++  L    ++EEA  L   +   G+ P+ + +N L++  C  G  
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 423

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    LF  M+S GC  +  +Y+ILI+  C   ++  AL L +EM S G   + VTYNT+
Sbjct: 424 HLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTI 483

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A ++FD+M   G++     + T IDGLCK   I +A EL   +     
Sbjct: 484 IDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 543

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ ++   CK G +K A ++  ++       DVVTY  +I+ LC  G+   A  
Sbjct: 544 QPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALK 603

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   M  KG+ P   A+N ++    R N     + L   M E
Sbjct: 604 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 199/397 (50%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +++ ++   G +P+V+T +TLI  LCR      A+ + EEM       GV   PD   +T
Sbjct: 183 SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM----SSHGVA--PDETTFT 236

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +P  VT N +I G+C      +A     + +  
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ VT++  +  LC+NG +  A ++++LM+Q G  P+ F YNT+++     G ++ A
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M   GC  +  +++ LI        +E AL L  E+  KG+ P V T+N L   
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++       +LF+EM+  G   D   Y   ID LC  G +  AL+L   +    C   
Sbjct: 417 LCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRS 476

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ +ID LCK  R++ A E+F  +    +    VT+N +I  LC   ++D A +L  
Sbjct: 477 TVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIE 536

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M  +G+ P+ + +N+++    +     K  ++L  M
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 200/389 (51%), Gaps = 6/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG + + + ++ L+N L       +  +++ EM  G G      +PD V   T+I  LC+
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEM-TGRG-----IQPDVVTLNTLIKALCR 209

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
              V  A  +L +M    + PD  T+ ++++GF        A R+  +MM+ G  P  VT
Sbjct: 210 AHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVT 269

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            +V+++  CK G++E+A   ++  I  G  P+   YNT + G C  G V+ A ++   M 
Sbjct: 270 VNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLML 329

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +VF+Y+ +IN   KN E++ A  + ++M+ +G  P   T+NTL + L   +++E
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLE 389

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L  E+   G++ D + +   I+ LCK G     + LF  ++   C  D  +Y+ LI
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           D LC  G+L  A +L + +         VTYN +I ALC   ++++A ++F  M+A+G++
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              V FNTL+ G  +        EL+ +M
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQM 538



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 165/319 (51%), Gaps = 7/319 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +L   G  P+V T++ LIN LC+ G   + + LFEEM +        C PD V
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------CTPDEV 443

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC  G +  A +LL +M+        VTYN++I   C      EA+ +F +M
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  + VTF+ ++D LCK  ++++A++L+E M++ G++PN   YN+++  +C  G +
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNI 563

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL L   M  KGI+PT   YN +
Sbjct: 564 KKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPV 623

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+     LC+  G I EA +    +    
Sbjct: 624 IQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG 683

Query: 301 CELDIRSYSCLIDGLCKSG 319
              +  S+  L +GL   G
Sbjct: 684 FMPEFSSFRMLAEGLLNLG 702



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 189/396 (47%), Gaps = 20/396 (5%)

Query: 25  LINGLCRTGHTIVA------------LNLFEEMIN------GNGEFGVVCKPDAVIYTTI 66
           L+  + R GH + A            L  F++ ++       N  FGV  + D V++  +
Sbjct: 111 LVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGV--QADTVVFNHL 168

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ++ L +   +   + +  +M  + I PDVVT N++I+  C A+    A  +  EM   GV
Sbjct: 169 LNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGV 228

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            P+  TF+ +M    + G +E A ++   M++ G  P     N L++G+C  GRV  A  
Sbjct: 229 APDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG 288

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
                 + G + +  +Y+  ++G C+N  +  AL +   ML +G  P V TYNT+   L 
Sbjct: 289 YIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 348

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +  +++ A  + ++M   G   DT  + T I  L     + EAL+L R L +     D+ 
Sbjct: 349 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVY 408

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +++ LI+ LCK G   +   LF  +       D VTYNI+I  LC+ GK+  A DL  +M
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           E+ G     V +NT++    +     +  E+  +MD
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 3/280 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+   +  I+ +L   G  +    L+  M + G +  A V  + ++ +    R + A +L
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146

Query: 188 FVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ++    ++ G + +   ++ L+N   +  +++   S+Y+EM  +GI+P VVT NTL   
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L   HQV  A  + +EM  HGVA D   + T + G  + G I  AL +   +    C   
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             + + LI+G CK GR++ A              D VTYN  +H LC +G +  A  +  
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M  +G  PD   +NT++    +N E  +   ++++M +R
Sbjct: 327 LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 366



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +AA +   + A G E +V+TY TLINGLC+ G T VAL L   M I G        +P  
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG-------IRPTP 617

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFI 119
             Y  +I  L +   +  A  L  +M +    PD +TY  V R  C       EA    +
Sbjct: 618 KAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLV 677

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           EM+++G  P   +F ++ + L   G  +     +EL+I+
Sbjct: 678 EMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 716



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 4/202 (1%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           L+    +  + E AL + +  L++    P+   Y  +   L      +    L  EM+R 
Sbjct: 59  LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTL---RILKCELDIRSYSCLIDGLCKSGRL 321
           G        R+F++   +     +A++L            + D   ++ L++ L +  +L
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           K+   +++ +    +  DVVT N +I ALC   ++  A  +  +M + GVAPD   F TL
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTL 238

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           M G I        + +  +M E
Sbjct: 239 MQGFIEEGSIEAALRVKAKMME 260


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 205/383 (53%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V++Y  +++G CR G     L L +E+  G G      KPD  
Sbjct: 260 EAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL-KGKG-----LKPDEY 313

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  II  LCK G V +A++LL  M+   + PD V Y +VI GFC   + + A +LF EM
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P++VT++ ++  +CK+GKM EA ++   M+  G+ P+   Y  L+DG+C  G +
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G   NV +Y+ L +G CKN EI+ A  L  EM  KG++P V TYNT+
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +I  +E+  KL +EM   G   DT  Y T +D  CK G + +A EL R +   + 
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +++ L++G C SG L+    L   +    ++ +  T+N ++   C    M    +
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M  +GV PD   +N L+ G
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKG 636



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 198/374 (52%), Gaps = 6/374 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   ++ +G  P+ + Y+T+I+G C+ G+   A  LF+EM            PD 
Sbjct: 329 VEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK------IVPDI 382

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT++I G+CK G + +A+E+  +M  K + PD VTY ++I G+C A +  EA  +  +
Sbjct: 383 VTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQ 442

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ PNVVT++ + D LCKNG+++ A++LL  M + G++PN + YNT+++G C  G 
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +  +L   M+  G   +  +Y+ L++ YCK  E+  A  L   ML+K ++PT+VT+N 
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G      +E   +L + M   G+  +   + + +   C    +    E+++ +    
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LI G CK+  +K AW L   +          TY+ +I       K  +A 
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682

Query: 361 DLFLDMEAKGVAPD 374
            LF +M   G+  +
Sbjct: 683 KLFEEMRKHGLVAE 696



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 216/400 (54%), Gaps = 9/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +    G   N ++ + +++ LC+ G    A NL  +M +  G F     PD V 
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTD-RGNF-----PDVVS 279

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ G C+ G +DK  +L+ ++K K + PD   YN++I   C   +  EA++L   M 
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR 339

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P+ V ++ ++   CK G +  A +L + M +  + P+   Y +++ G C +G++ 
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV 399

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E+F  M   G + +  +Y+ LI+GYCK  E++ A S++++M+ KG+ P VVTY  L 
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +++ A +L  EM R G+  + + Y T ++GLCK G I + ++L   + +    
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ L+D  CK G +  A EL   +    L   +VT+N++++  C  G ++    L
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579

Query: 363 FLDMEAKGVAPDCVAFNTLMLG-CIRNN--ETSKVVELLH 399
              M  KG+ P+   FN+LM   CI+NN   T+++ + +H
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 210/385 (54%), Gaps = 7/385 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGL-CRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           +EA  LF KL  +G   +V + +  ++ L C      +A+ +FEE      E GV    +
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEF----PELGVCW--N 241

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V    ++  LC+ G V +A  LL+QM D+   PDVV+Y  V+ G+C   + ++  +L  
Sbjct: 242 TVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+  +G++P+   ++ I+  LCKNG++ EA QLL  M + GV P+  VY T++ GFC  G
Sbjct: 302 ELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A +LF  M       ++ +Y+ +I+G CK+ ++  A  +++EML KG++P  VTY 
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYT 421

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  +  +++ AF + ++M + G+  +   Y    DGLCKNG I  A EL   +   
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++ +Y+ +++GLCK G ++   +L   +       D +TY  ++ A C  G+M KA
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLG 384
           H+L   M  K + P  V FN LM G
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNG 566



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 164/291 (56%), Gaps = 6/291 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  ++   G  PNV+TY+ L +GLC+ G   VA  L  EM           +P+  
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG------LQPNVY 488

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI++GLCK G +++  +L+ +M      PD +TY +++  +C   +  +A  L   M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ +QP +VTF+V+M+  C +G +E+  +L+E M++ G+ PNA  +N+LM  +C+   +
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E++ +M   G   +  +Y+ILI G+CK + ++ A  L+ EM+ KG   T  TY+ L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
             G ++  +   A KLF+EM++HG+ A+   Y  F+D   + G     LEL
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 203/402 (50%), Gaps = 14/402 (3%)

Query: 6   LFTKL-----KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           LFT++     K +G  P  + +      L   G  + A  LF +++     +GVV   D+
Sbjct: 155 LFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKLL----RYGVVVSVDS 208

Query: 61  V-IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
             ++ + +   C    +  A ++  +  +  +  + V+ N V+   C      EA  L +
Sbjct: 209 CNLFLSRLS--CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLV 266

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M D+G  P+VV++ V++   C+ G++++  +L++ +   G++P+ ++YN ++   C  G
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V  A++L   M   G   +   Y+ +I+G+CK   +  A  L+ EM  K I P +VTY 
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYT 386

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           ++  G+ +  ++  A ++F+EM   G+  D   Y   IDG CK G + EA  +   +   
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++ +Y+ L DGLCK+G + +A EL H + R  L  +V TYN +++ LC  G +++ 
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  +M+  G  PD + + TLM    +  E +K  ELL  M
Sbjct: 507 VKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 38  ALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           + +LF EM I    ++G       +++      L + GFV +A++L  ++    +   V 
Sbjct: 152 SFHLFTEMLIYTYKDWG----SHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVD 207

Query: 97  TYNSVI-RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           + N  + R  C       A ++F E  + GV  N V+ ++++  LC+ GK+ EA  LL  
Sbjct: 208 SCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQ 267

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G  P+   Y  ++ G+C  G +++  +L   ++  G K + + Y+ +I   CKN E
Sbjct: 268 MTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE 327

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A  L   M   G+ P  V Y T+  G  ++  V  A KLFDEM+R  +  D   Y +
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I G+CK+G +VEA E+F  + +   E D  +Y+ LIDG CK+G +K A+ + + + +  
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           L  +VVTY  +   LC +G++D A++L  +M  KG+ P+   +NT++ G  +     + V
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507

Query: 396 ELLHRMD 402
           +L+  MD
Sbjct: 508 KLMEEMD 514



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 41/277 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G +PNV TY+T++NGLC+ G+    + L EEM +  G +     PD + 
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM-DLAGFY-----PDTIT 524

Query: 63  YTTIIDGLCKEGFVDKAKELL-------LQ----------------------------MK 87
           YTT++D  CK G + KA ELL       LQ                            M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           +K I P+  T+NS+++ +C  N+      ++  M D+GV P+  T+++++   CK   M+
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  L + M++ G    A  Y+ L+ GF    +   A++LF  M   G       Y I +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           +   +    E  L L  E +++      V Y   FIG
Sbjct: 705 DVNYEEGNWEITLELCDEFMTELSGTIFVVYICFFIG 741


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 205/405 (50%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKL--KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EA+ L  ++  +  G   N +T++ +I+ L R GH   A+ L + M        +  K  
Sbjct: 255 EASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-------RLSKKAS 307

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +  Y  +I  L + GFV KA+ L ++M+++ I P VVTYN++I G      +  A+  F 
Sbjct: 308 SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA 367

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+V+T++ +++  CK G ++EA  LL  + + G+ P    YNTL+DG+C  G
Sbjct: 368 EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +  A+ L   M   GC  +V +Y+IL+NG  K + +  A   + EMLSKG++P    YN
Sbjct: 428 DLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T       +     AF+L + M   G+  DT  Y   IDGLCK G + +A  L   +   
Sbjct: 488 TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD 547

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D  +Y+CLI   C+ G L+ A +L + +    L   VVTY I++H  C  G +  A
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSA 607

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  F  M   G+ P+ + +N L+        T       H M ER
Sbjct: 608 YGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLER 652



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  +++  G  P V+TY+ +I+GL +      A   F EM       G++  PD +
Sbjct: 326 KAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM----RAMGLL--PDVI 379

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++++  CK G + +A  LL  ++   + P V+TYN++I G+C   D  EA+RL  EM
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG  P+V T++++M+   K   +  A +  + M+  G++P+ F YNT +         
Sbjct: 440 VEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSST 499

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   +  +Y+++I+G CK   ++ A  L ++M+S G++P  +TY  L
Sbjct: 500 PMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E   +  A KL + M   G+      Y   +   C+ G +  A   FR +  +  
Sbjct: 560 IHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGI 619

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E +  +Y+ LI  LC +GR  +A+  FH +    L  +  TY ++I   C +G    A  
Sbjct: 620 EPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR 679

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L+ +M   G+ PD    N L  G
Sbjct: 680 LYFEMHQNGIPPDYCTHNALFKG 702



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 29/277 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---FGV---V 55
           EA  L  ++   GC P+V TY+ L+NG  +  +  +A   F+EM++   +   F     +
Sbjct: 431 EARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 56  CK-----------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        PD V Y  IIDGLCK G +  AK L  +M    + 
Sbjct: 491 CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQ 550

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +TY  +I   C      EA++L   M+  G+QP+VVT+++++   C+ G +  A   
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGW 610

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M+ +G+ PN   YN L+   C+TGR   A   F  M   G   N ++Y++LI+G C+
Sbjct: 611 FRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCR 670

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
                 A+ LY EM   GI P   T+N LF G  E H
Sbjct: 671 EGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGH 707



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 38/343 (11%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ--GVQPNVVTFS 134
           D  + +  +M    + P +VTYN+++  F      +EA  L  EM  Q  G   N VTF+
Sbjct: 219 DDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFN 278

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           V++  L + G +E A +L++ M ++  + ++F YN L+      G V +A+ L + ME+ 
Sbjct: 279 VVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENE 337

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G    V +Y+ +I+G  K ++ E A   ++EM + G+ P V+TYN+L     +   ++ A
Sbjct: 338 GIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEA 397

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L  +++R G+A     Y T IDG C+ G + EA  L   +    C  D+ +Y+ L++G
Sbjct: 398 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNG 457

Query: 315 LCKSGRLKIAWELFHS-LPRGV----------------------------------LIAD 339
             K   L +A E F   L +G+                                  +  D
Sbjct: 458 SRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPD 517

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            VTYN++I  LC  G +  A  L   M + G+ PDC+ +  L+
Sbjct: 518 TVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLI 560



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 3/292 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PDV   N V+R    A   ++ + ++ EM+   V+P +VT++ ++D   K G+ +EAS
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 151 QLLELMIQI--GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            LL+ M     G   N   +N ++      G +  A +L  SM  +  K + F+Y+ LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLIT 316

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +   +  A +L  EM ++GI PTVVTYN +  GL +  Q E A   F EM+  G+  
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y + ++  CK G + EAL L   LR       + +Y+ LIDG C+ G L  A  L 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
             +       DV TY I+++       +  A + F +M +KG+ PDC A+NT
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L+ +  +   G+ P V   N +   L +  + +    ++ EM +  V      Y T +D 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 280 LCKNGYIVEALELFRTLRILKC--ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             K G   EA  L + +        L+  +++ +I  L + G L+ A +L  S+ R    
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKK 305

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           A   TYN +I AL   G + KA  L ++ME +G+ P  V +N ++ G ++
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK 355


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 218/435 (50%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +K  G  P+V   + +++   ++  T  A  L+ EM      F +  K   V
Sbjct: 139 DAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM------FRMRIKSSVV 192

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LCKEG + KAKE +  M+   I P+VVTYN++I G+C       A+ +F  M
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG-- 179
             +GV+P+  T+   +  +CK GK+EEAS +LE M +IG+RP A  YNTL+DG+C  G  
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312

Query: 180 ---------------------------------RVNRAKELFVSMESMGCKHNVFSYSIL 206
                                            +++ A  +   M   G   +  +Y+IL
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           INGYC+   ++ A +L+ EM+SKGI+PT VTY +L   L +  ++++A  LF+++ R G+
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   IDG C NG +  A  + + +  +K   D  +++ L+ G C+ G+++ A E
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    +  D ++YN +I      G M  A  +  +M + G  P  + +N L+ G  
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLC 552

Query: 387 RNNETSKVVELLHRM 401
           +N E     +LL  M
Sbjct: 553 KNEEGDHAEQLLKEM 567



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 188/387 (48%), Gaps = 35/387 (9%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           GV+     V+Y  +I   C+    D A E    MK K + P V   N ++  F  +N + 
Sbjct: 114 GVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTE 173

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A  L+ EM    ++ +VVTF+++++ LCK GK+++A + + LM  +G++PN   YNT++
Sbjct: 174 KAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTII 233

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G+C  GRV  A+ +F  M+  G K + ++Y   I+G CK  ++E A  +  +M   G++
Sbjct: 234 HGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFD--------------------------------- 259
           PT VTYNTL  G      +E AF   D                                 
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353

Query: 260 --EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM   G+  D+  Y   I+G C+ G + +A  L   +     +    +Y+ LI  L K
Sbjct: 354 IKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            GR+K A +LF  + R  +  D++ +N +I   CA+G MD+A  +  +M+   V PD V 
Sbjct: 414 RGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVT 473

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           FNTLM G  R  +     EL+  M  R
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSR 500



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 33/310 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA+ +  K+K  G  P  +TY+TLI+G C  G+  +A +  ++M+               
Sbjct: 279 EASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLI 338

Query: 50  -------------------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                               E G+V  PD+V Y  +I+G C+ G V KA  L  +M  K 
Sbjct: 339 HALFLDCKMDEADGIIKEMSEKGLV--PDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I P  VTY S+I          +A  LF +++ +G+ P+++ F+ ++D  C NG M+ A 
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            +L+ M Q+ V P+   +NTLM G C  G+V  A+EL   M+S G K +  SY+ LI+GY
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K  +++ A  +  EMLS G  PT++TYN L  GL +  + + A +L  EM   G+  + 
Sbjct: 517 SKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576

Query: 271 WAYRTFIDGL 280
             Y + I+G+
Sbjct: 577 NTYLSLIEGI 586


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 214/435 (49%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K  G  P + T ++L++   +   T  A  L+ EM      F +  K    
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM------FRLRIKSSVY 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LCKEG + KAK+ +  M+   + P++VTYN+++ G+C +     A  +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG-- 179
             Q ++P+  T+  ++  +CK G++EEAS++ E M+Q G+RP+A +YNTL+DGFC  G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 180 ---------------------------------RVNRAKELFVSMESMGCKHNVFSYSIL 206
                                            R + A+ +   ++  G   +  +Y+IL
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           INGYC+    + A  L+ EML+ GIKPT  TY +L   L + ++++ A  LF ++   GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   IDG C N  +  A EL + +  +K   D  +++ ++ G C+ G+++ A E
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  + R  +  D +++N +I      G +  A  +  +M   G  P  + +N L+ G  
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 387 RNNETSKVVELLHRM 401
           +N E     ELL  M
Sbjct: 583 KNQEGDLAEELLKEM 597



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++++  +I   C     D+A E    MK+K + P + T NS++  F   N +  A  L+ 
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM    ++ +V TF+++++ LCK GK+++A   +  M   GV+PN   YNT++ G+C +G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  A  +  +M+    + + F+Y  LI+G CK   +E A  ++ EM+ KG++P+ V YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G      ++ A    DEM + G++     Y + I  L       EA  + + ++  
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +Y+ LI+G C+    K A+ L   +    +     TY  ++H L    +M +A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            DLF  + ++GV PD + FN L+ G   N+      ELL  MD
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMD 493



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 166/316 (52%), Gaps = 6/316 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F ++   G  P+ + Y+TLI+G C  G+  +A    +EM+           P   
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMS 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I  L  E   D+A+ ++ ++++K I+PD +TYN +I G+C   ++ +A  L  EM
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P   T++ ++  L K  +M+EA  L + +   GV P+A ++N L+DG C    V
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M+ M    +  +++ ++ G+C+  ++E A  L+ EM  +GIKP  +++NTL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      ++ AF++ +EM   G       Y   + GLCKN     A EL + +     
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 302 ELDIRSYSCLIDGLCK 317
             D  +Y  LI+G+ K
Sbjct: 603 TPDDTTYFTLIEGIAK 618



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 133/248 (53%), Gaps = 6/248 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G  P+ ITY+ LING CR  +   A  L +EM+          KP   
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG------IKPTKK 432

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+++  L K+  + +A +L  ++  + + PD + +N++I G C  ++   A  L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+ VTF+ IM   C+ GK+EEA +L + M + G++P+   +NTL+ G+   G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G    V +Y+ L+ G CKN+E + A  L  EM+SKG+ P   TY TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 242 FIGLFEIH 249
             G+ +++
Sbjct: 613 IEGIAKVN 620



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 116/241 (48%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           ++ V++ L+   C   R + A E F +M+  G    + + + L++ + K    E A  LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +EM    IK +V T+N +   L +  ++++A      M+  GV  +   Y T + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G +  A  +  T++  K E D  +Y  LI G+CK GRL+ A ++F  + +  L    V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I   C  G +D A     +M  KG++P    +N+L+        T +   ++  + E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 404 R 404
           +
Sbjct: 390 K 390



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K  G +P+ I+++TLI+G  R G    A  +  EM++          P  +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVL 572

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
            Y  ++ GLCK    D A+ELL +M  K + PD  TY ++I G    N  +E K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 214/435 (49%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K  G  P + T ++L++   +   T  A  L+ EM      F +  K    
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM------FRLRIKSSVY 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LCKEG + KAK+ +  M+   + P++VTYN+++ G+C +     A  +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG-- 179
             Q ++P+  T+  ++  +CK G++EEAS++ E M+Q G+RP+A +YNTL+DGFC  G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 180 ---------------------------------RVNRAKELFVSMESMGCKHNVFSYSIL 206
                                            R + A+ +   ++  G   +  +Y+IL
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           INGYC+    + A  L+ EML+ GIKPT  TY +L   L + ++++ A  LF ++   GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   IDG C N  +  A EL + +  +K   D  +++ ++ G C+ G+++ A E
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  + R  +  D +++N +I      G +  A  +  +M   G  P  + +N L+ G  
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 387 RNNETSKVVELLHRM 401
           +N E     ELL  M
Sbjct: 583 KNQEGDLAEELLKEM 597



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++++  +I   C     D+A E    MK+K + P + T NS++  F   N +  A  L+ 
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM    ++ +V TF+++++ LCK GK+++A   +  M   GV+PN   YNT++ G+C +G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  A  +  +M+    + + F+Y  LI+G CK   +E A  ++ EM+ KG++P+ V YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G      ++ A    DEM + G++     Y + I  L       EA  + + ++  
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +Y+ LI+G C+    K A+ L   +    +     TY  ++H L    +M +A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            DLF  + ++GV PD + FN L+ G   N+      ELL  MD
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMD 493



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 165/316 (52%), Gaps = 6/316 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F ++   G  P+ + Y+TLI+G C  G+  +A    +EM+           P   
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMS 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I  L  E   D+A+ ++ ++++K I+PD +TYN +I G+C   ++ +A  L  EM
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P   T++ ++  L K  +M+EA  L + +   GV P+  ++N L+DG C    V
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M+ M    +  +++ ++ G+C+  ++E A  L+ EM  +GIKP  +++NTL
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      ++ AF++ +EM   G       Y   + GLCKN     A EL + +     
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 302 ELDIRSYSCLIDGLCK 317
             D  +Y  LI+G+ K
Sbjct: 603 TPDDTTYFTLIEGIAK 618



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 134/248 (54%), Gaps = 6/248 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G  P+ ITY+ LING CR  +   A  L +EM+          KP   
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG------IKPTKK 432

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+++  L K+  + +A +L  ++  + + PDV+ +N++I G C  ++   A  L  +M
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+ VTF+ IM   C+ GK+EEA +L + M + G++P+   +NTL+ G+   G +
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G    V +Y+ L+ G CKN+E + A  L  EM+SKG+ P   TY TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 242 FIGLFEIH 249
             G+ +++
Sbjct: 613 IEGIAKVN 620



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 116/241 (48%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           ++ V++ L+   C   R + A E F +M+  G    + + + L++ + K    E A  LY
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +EM    IK +V T+N +   L +  ++++A      M+  GV  +   Y T + G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G +  A  +  T++  K E D  +Y  LI G+CK GRL+ A ++F  + +  L    V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I   C  G +D A     +M  KG++P    +N+L+        T +   ++  + E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 404 R 404
           +
Sbjct: 390 K 390



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K  G +P+ I+++TLI+G  R G    A  +  EM++          P  +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVL 572

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
            Y  ++ GLCK    D A+ELL +M  K + PD  TY ++I G    N  +E K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 211/395 (53%), Gaps = 6/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PNVIT + +++ LC+      A ++FE + +        C+PDAV Y ++I+G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEG 488

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G VD+A +L  QM D N  P+ V Y S+IR F       +  +++ EM+  G  P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++  +  MD + K G++E+   L + +  +G  P+A  Y  L+ G    G  + A ELF 
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           +M+  GC  +  +Y+ +I+G+CK+ ++  A  L  EM +KG +PTVVTY ++  GL +I 
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E +  G+  +   Y + IDG  K G I EA  +   L       ++ +++
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+D L K+  +  A   F S+       + +TY+I+IH LC   K +KA   + +M+ +
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  P+   + T++ G  +     +   L  +  E+
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 168/314 (53%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++K  G  P+  +Y+ LI+GL + G    A  LF  M     E G  C  D   Y 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM----KEQG--CVLDTRAYN 623

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV +S ++D   K G+++EA  ++E ++Q G+ PN + +N L+D       ++ A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +YSILI+G CK ++   A   + EM  +G KP V TY T+  G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LF++ +  G  AD+  Y   I+GL       +A  LF   R+  C + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 305 IRSYSCLIDGLCKS 318
            ++   L+D L K+
Sbjct: 864 TKTCVVLLDSLHKA 877



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 204/402 (50%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  + +  GC P+V++Y+ +++ L R G    AL  FEEM            P+  
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLS 410

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G ++ A  +   MKD  + P+V+T N ++   C A   ++A  +F  +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +P+ VT+  +++ L ++G+++EA +L E M+     PNA VY +L+  F   GR 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M  +GC  ++   +  ++   K  EIE   +L+ E+ + G  P   +Y  L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +      A++LF  M+  G   DT AY T IDG CK+G + +A +L   ++    
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  ++  KG+ P+   +N L+   ++  E S+ +     M +
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 169/324 (52%), Gaps = 6/324 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++   GC P+++  +T ++ + + G       LF+E+ N     G +  PDA  YT 
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN----LGFI--PDARSYTI 589

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K GF  +A EL   MK++    D   YN+VI GFC +   N+A +L  EM  +G
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P VVT+  ++D L K  +++EA  L E     G+  N  +Y++L+DGF   GR++ A 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   +   G   NV++++ L++   K +EI  AL  +  M      P  +TY+ L  GL
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +I +  +AF  + EMQ+ G   + + Y T I GL K G IVEA  LF   +      D 
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 306 RSYSCLIDGLCKSGRLKIAWELFH 329
             Y+ +I+GL  + R   A+ LF 
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFE 853



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 185/400 (46%), Gaps = 29/400 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A ++F  L    C P+ +TY +LI GL R G    A  L+E+M++ N     V      
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PD ++  T +D + K G ++K + L  ++K+    
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  +Y  +I G   A  ++EA  LF  M +QG   +   ++ ++D  CK+GK+ +A QL
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G + NV  YS LI+G+ K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P V T+N L   L +  ++  A   F  M+      +   
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I GLCK     +A   ++ ++    + ++ +Y+ +I GL K+G +  A  LF    
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
               +AD   YN +I  L    +   A+ LF +   KG +
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 7/392 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      ++     P    Y+ LI  L  +  +   L LF++M     E G     +  
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM----QELGYAV--NVH 236

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+I    +EG VD A  LL +MK  ++ PDVV YN  I  F  A   + A + F EM
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM 296

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + VT++ ++  LCK  ++ EA +L E M Q    P A+ YNT++ G+ + G+ 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L       GC  +V SY+ +++   +  +++ AL  + EM    I P + TYN +
Sbjct: 357 EDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIM 415

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A  + D M+  G+  +       +D LCK   + +A  +F  L    C
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LI+GL + GR+  A++L+  +     I + V Y  +I      G+ +  H 
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           ++ +M   G +PD +  NT M    +  E  K
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 177/386 (45%), Gaps = 9/386 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
            Y++L+  + RT        + EEM I G G     C         I+    K   + +A
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC-------IEIVLSFIKSRKLREA 184

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              +  M+     P    Y ++I     + DS+    LF +M + G   NV  F+ ++  
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             + G+++ A  LL+ M    + P+  +YN  +D F   G+V+ A + F  M++ G   +
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLD 304

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
             +Y+ +I   CK   +  A+ L+  M      P    YNT+ +G     + E A+ L +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
             +R G      +Y   +  L + G + EAL+ F  ++      ++ +Y+ +ID LCK+G
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +L+ A  +  ++    L  +V+T NIM+  LC   ++D A  +F  ++ K   PD V + 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           +L+ G  R+    +  +L  +M + N
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDAN 509


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 170/279 (60%), Gaps = 5/279 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+ VTF++++D LCK GK+ EA  +++ MI+ GV PN   Y++LM+G+ L  RV  A+
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F +M + GC  +V SY+ILING CK + I+ A  ++ EM  +G+ P   TYNTL  G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           +     ++  +LF +M   G + D   Y  F+ GL K GY+ +ALELFR ++      D+
Sbjct: 126 W-----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ LID +CKSG+L+ A ELF  L    L+ DV ++  +I  LC +G +D+A+  F  
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ME  G  PDC ++N ++ G ++NN  S+  +L   M +R
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDR 279



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 165/299 (55%), Gaps = 5/299 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PDAV +  ++D LCK+G + +A+ ++  M +K + P+ VTY+S++ G+   N   EA+++
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+ +G  P+V++++++++  CK  +++EA Q+ + M   G+ PN   YNTL+ GF  
Sbjct: 68  FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW- 126

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                +  +LF  M + GC  ++ +YSI ++G  K   ++ AL L+ EM +  + P +V 
Sbjct: 127 ----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L   + +  ++E A +LF ++   G+  D  ++ + I GLC+ G + EA + FR + 
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQME 242

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
              C  D  SY+ ++ G  ++     A +LF  +      AD +T  +    L  D  +
Sbjct: 243 RDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNL 301



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 144/282 (51%), Gaps = 11/282 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G EPN +TYS+L+NG         A  +F  MI         C PD +
Sbjct: 28  EAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRG------CIPDVL 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CK   +D+AK++  +M  + + P+  TYN+++ GF       +  +LF +M
Sbjct: 82  SYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW-----KQKIQLFKDM 136

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P++VT+S+ +  L K G +++A +L   M    + P+  +YN L+D  C +G++
Sbjct: 137 HAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKL 196

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ELF+ +   G   +V S++ +I+G C+   ++ A   + +M   G  P   +YN +
Sbjct: 197 EDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVI 256

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             G  + +   RA +LF EM   G +AD        D L K+
Sbjct: 257 VRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 5/176 (2%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M S  I P  VT+N L   L +  ++  A  +   M   GV  +T  Y + ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA ++F  +    C  D+ SY+ LI+G CK+ R+  A ++F  +    LI +  TYN 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++      G   +   LF DM A+G +PD V ++  + G  +     + +EL   M
Sbjct: 121 LLG-----GFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREM 171



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%)

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           +++ D VT+NI++  LC  GK+ +A  +   M  KGV P+ V +++LM G +  N   + 
Sbjct: 5   IIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEA 64

Query: 395 VELLHRMDER 404
            ++ + M  R
Sbjct: 65  RKVFNAMITR 74


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 202/383 (52%), Gaps = 8/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K  G E ++I Y++LI G C  G       LF+E++   G+      P A+
Sbjct: 230 EAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLE-RGD-----SPCAI 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK G + +A E+   M ++ + P+V TY  +I G C    + EA +L   M
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +PNVVT+++I+++LCK+  + +A +++ELM +   RP+   YN+L+ G C  G +
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 182 NRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + A +L   M  +S     +V S++ LI+G CK   +  AL +Y  ++ K     +VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +   V +A +L+ ++    +  ++  Y T IDG CK G +  A  L   +R+ 
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS 523

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    +  Y+CL+  LCK G L  AW LF  + R     DV+++NIMI      G +  A
Sbjct: 524 ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSA 583

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
             L + M   G++PD   ++ L+
Sbjct: 584 ESLLVGMSHAGLSPDLFTYSKLI 606



 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 216/437 (49%), Gaps = 43/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  +++     P+V++Y+T+I G C       AL L  EM  G+G     C    V
Sbjct: 160 KAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEM-QGSG-----CSWSLV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D+A  LL +MK K +  D++ Y S+IRGFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +T++ ++   CK G+++EAS++ E M++ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M     + NV +Y+I+IN  CK+  +  AL +   M  +  +P  +TYN+L
Sbjct: 334 KEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLC------------------ 281
             GL     ++ A KL   M +       D  ++   I GLC                  
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453

Query: 282 -----------------KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                            K+G + +A+EL++ +   K   +  +Y+ +IDG CK+G L +A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +    L   V  YN ++ +LC  G +D+A  LF +M+     PD ++FN ++ G
Sbjct: 514 KGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573

Query: 385 CIRNNETSKVVELLHRM 401
            ++  +      LL  M
Sbjct: 574 SLKAGDIKSAESLLVGM 590



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 186/341 (54%), Gaps = 2/341 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLC+     KA  LL +M+  ++ PDVV+YN+VIRGFC   +  +A +L  EM 
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   ++VT+ +++D  CK GKM+EA  LL+ M   G+  +  VY +L+ GFC  G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R K LF  +   G      +Y+ LI G+CK   ++ A  ++  M+ +G++P V TY  L 
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + + + A +L + M +     +   Y   I+ LCK+  + +ALE+   ++  +  
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAH 360
            D  +Y+ L+ GLC  G L  A +L + + +       DV+++N +IH LC   ++ +A 
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D++  +  K  A D V  N L+   +++ + +K +EL  ++
Sbjct: 445 DIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQI 485



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 179/400 (44%), Gaps = 44/400 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F  +   G  PNV TY+ LI+GLC  G T  AL L   M+  + E      P+ V
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE------PNVV 353

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+ LCK+  V  A E++  MK +   PD +TYNS++ G C   D +EA +L   M
Sbjct: 354 TYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEA------------------------------ 149
           +       P+V++F+ ++  LCK  ++ +A                              
Sbjct: 414 LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSG 473

Query: 150 --SQLLELMIQIG---VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             ++ +EL  QI    + PN+  Y T++DGFC TG +N AK L   M       +VF Y+
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L++  CK   ++ A  L+ EM      P V+++N +  G  +   ++ A  L   M   
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G++ D + Y   I+   K GY+ EA+  F  +     E D      ++      G     
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKL 653

Query: 325 WELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            E    L  + V++   +T  +M +   + G MD A  L 
Sbjct: 654 TEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 162/306 (52%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V+ + ++  F     +  A  +   M+ +G   NV  +++++  LC+N +  +A  LL  
Sbjct: 108 VSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLRE 167

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M Q  + P+   YNT++ GFC    + +A +L   M+  GC  ++ ++ ILI+ +CK  +
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+ L  EM  KG++  ++ Y +L  G  +  +++R   LFDE+   G +     Y T
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I G CK G + EA E+F  +       ++ +Y+ LIDGLC  G+ K A +L + + +  
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              +VVTYNI+I+ LC D  +  A ++   M+ +   PD + +N+L+ G     +  +  
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 396 ELLHRM 401
           +LL+ M
Sbjct: 408 KLLYLM 413



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N  S S L+  + + ++   A  + + ML +G    V  YN L  GL    +  +A  L 
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM+++ +  D  +Y T I G C+   + +AL+L   ++   C   + ++  LID  CK+
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G++  A  L   +    L AD++ Y  +I   C  G++D+   LF ++  +G +P  + +
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           NTL+ G  +     +  E+   M ER
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMER 311



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 96/204 (47%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           F+ + L+    +++  E A S Y +ML        V+ + L     ++ +   A  +   
Sbjct: 73  FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M + G A + + Y   + GLC+N    +A+ L R +R      D+ SY+ +I G C+   
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L+ A +L + +        +VT+ I+I A C  GKMD+A  L  +M+ KG+  D + + +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G     E  +   L   + ER
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLER 276


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 211/395 (53%), Gaps = 6/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PNVIT + +++ LC+      A ++FE + +        C+PDAV Y ++I+G
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEG 488

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G VD+A +L  QM D N  P+ V Y S+IR F       +  +++ EM+  G  P+
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++  +  MD + K G++E+   L + +  +G  P+A  Y  L+ G    G  + A ELF 
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           +M+  GC  +  +Y+ +I+G+CK+ ++  A  L  EM +KG +PTVVTY ++  GL +I 
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKID 668

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E +  G+  +   Y + IDG  K G I EA  +   L       ++ +++
Sbjct: 669 RLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 728

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+D L K+  +  A   F S+       + +TY+I+IH LC   K +KA   + +M+ +
Sbjct: 729 CLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G  P+   + T++ G  +     +   L  +  E+
Sbjct: 789 GFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 168/314 (53%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++K  G  P+  +Y+ LI+GL + G    A  LF  M     E G  C  D   Y 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM----KEQG--CVLDTRAYN 623

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV +S ++D   K G+++EA  ++E ++Q G+ PN + +N L+D       ++ A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +YSILI+G CK ++   A   + EM  +G KP V TY T+  G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LF++ +  G  AD+  Y   I+GL       +A  LF   R+  C + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 305 IRSYSCLIDGLCKS 318
            ++   L+D L K+
Sbjct: 864 TKTCVVLLDSLHKA 877



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 204/402 (50%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  + +  GC P+V++Y+ +++ L R G    AL  FEEM            P+  
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLS 410

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G ++ A  +   MKD  + P+V+T N ++   C A   ++A  +F  +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +P+ VT+  +++ L ++G+++EA +L E M+     PNA VY +L+  F   GR 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M  +GC  ++   +  ++   K  EIE   +L+ E+ + G  P   +Y  L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +      A++LF  M+  G   DT AY T IDG CK+G + +A +L   ++    
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  ++  KG+ P+   +N L+   ++  E S+ +     M +
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 169/324 (52%), Gaps = 6/324 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++   GC P+++  +T ++ + + G       LF+E+ N     G +  PDA  YT 
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN----LGFI--PDARSYTI 589

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K GF  +A EL   MK++    D   YN+VI GFC +   N+A +L  EM  +G
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P VVT+  ++D L K  +++EA  L E     G+  N  +Y++L+DGF   GR++ A 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   +   G   NV++++ L++   K +EI  AL  +  M      P  +TY+ L  GL
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +I +  +AF  + EMQ+ G   + + Y T I GL K G IVEA  LF   +      D 
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS 829

Query: 306 RSYSCLIDGLCKSGRLKIAWELFH 329
             Y+ +I+GL  + R   A+ LF 
Sbjct: 830 AIYNAIIEGLSNANRASDAYRLFE 853



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 185/400 (46%), Gaps = 29/400 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A ++F  L    C P+ +TY +LI GL R G    A  L+E+M++ N     V      
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PD ++  T +D + K G ++K + L  ++K+    
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  +Y  +I G   A  ++EA  LF  M +QG   +   ++ ++D  CK+GK+ +A QL
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G + NV  YS LI+G+ K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P V T+N L   L +  ++  A   F  M+      +   
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I GLCK     +A   ++ ++    + ++ +Y+ +I GL K+G +  A  LF    
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
               +AD   YN +I  L    +   A+ LF +   KG +
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 7/392 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      ++     P    Y+ LI  L  +  +   L LF++M     E G     +  
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM----QELGYAV--NVH 236

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+I    +EG VD A  LL +MK  ++ PDVV YN  I  F  A   + A + F EM
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEM 296

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + VT++ ++  LCK  ++ EA +L E M Q    P A+ YNT++ G+ + G+ 
Sbjct: 297 KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKF 356

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L       GC  +V SY+ +++   +  +++ AL  + EM    I P + TYN +
Sbjct: 357 EDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIM 415

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A  + D M+  G+  +       +D LCK   + +A  +F  L    C
Sbjct: 416 IDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC 475

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LI+GL + GR+  A++L+  +     I + V Y  +I      G+ +  H 
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHK 535

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           ++ +M   G +PD +  NT M    +  E  K
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 177/386 (45%), Gaps = 9/386 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
            Y++L+  + RT        + EEM I G G     C         I+    K   + +A
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC-------IEIVLSFIKSRKLREA 184

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              +  M+     P    Y ++I     + DS+    LF +M + G   NV  F+ ++  
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             + G+++ A  LL+ M    + P+  +YN  +D F   G+V+ A + F  M++ G   +
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLD 304

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
             +Y+ +I   CK   +  A+ L+  M      P    YNT+ +G     + E A+ L +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
             +R G      +Y   +  L + G + EAL+ F  ++      ++ +Y+ +ID LCK+G
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +L+ A  +  ++    L  +V+T NIM+  LC   ++D A  +F  ++ K   PD V + 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           +L+ G  R+    +  +L  +M + N
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDAN 509


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 215/383 (56%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ A    P++ITY+TLI+G C+ G+   +  + E M   N E      P  +
Sbjct: 605 DAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIE------PSLI 658

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++ GL K G V+ A+ +L +MKD+   PD  T++ +  G+   + ++ A  ++   
Sbjct: 659 TFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETA 718

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G++ N  T S++++ LCK G++E+A ++L   +  G+ PN  +YNT++DG+   G +
Sbjct: 719 VDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL 778

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+    +ME  G K +  +Y+ LI  +C+  ++E A    ++M  KG+ P+V TYN L
Sbjct: 779 VGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNIL 838

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G    ++ ++ F L  EM+ +G   +  +Y T I+ LCK   ++EA  + R +     
Sbjct: 839 IGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 898

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++R Y+ LIDG C  G+++ A+     + +  +  ++VTYN +I  L  +GK+ +A D
Sbjct: 899 SPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAED 958

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           + L++  KG+ PD   +N+L+ G
Sbjct: 959 MLLEISRKGLKPDVFTYNSLISG 981



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF  L+  G  P+  + + L++ L +T    V +N+F  ++  +       +P   
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 553

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    K   V K  EL  +MK   I+P V  YN +I G C      +A++LF EM
Sbjct: 554 MYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM 613

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+++T++ ++D  CK+G  E++ ++ E M    + P+   +NTL+ G    G V
Sbjct: 614 LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMV 673

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   M+  G   + F++SIL +GY  N + + AL +Y   +  G+K    T + L
Sbjct: 674 EDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  Q+E+A ++       G+  +   Y T IDG  + G +V A      +     
Sbjct: 734 LNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGM 793

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+CLI   C+ G ++ A +  + +    +   V TYNI+I       + DK  D
Sbjct: 794 KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L  +ME  G  P+ V++ TL+
Sbjct: 854 LLKEMEDNGTMPNVVSYGTLI 874



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 197/391 (50%), Gaps = 10/391 (2%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            G + N  T S L+N LC+ G    A    EE++      G+V  P+ V+Y T+IDG  ++
Sbjct: 722  GLKMNAYTCSILLNALCKEGQIEKA----EEILGREMAKGLV--PNEVLYNTMIDGYSRK 775

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
            G +  A+  +  M+ + + PD + YN +IR FC   D   A++   +M  +GV P+V T+
Sbjct: 776  GDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETY 835

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            ++++    +  + ++   LL+ M   G  PN   Y TL++  C   ++  A+ +   ME 
Sbjct: 836  NILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 895

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             G   NV  Y++LI+G C   +IE A     EM  KGI+  +VTYNTL  GL    ++  
Sbjct: 896  RGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAE 955

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
            A  +  E+ R G+  D + Y + I G    G +   + L+  ++    +  +++Y  LI 
Sbjct: 956  AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI- 1014

Query: 314  GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             LC    +++  ++F  +    L  D++ YN ++H     G MDKA +L   M  K +  
Sbjct: 1015 SLCTKEGIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGL 1071

Query: 374  DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D   +N+L+LG ++  +  +V  L+  M  R
Sbjct: 1072 DKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 192/391 (49%), Gaps = 10/391 (2%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            G +P+ + Y+ LI   C  G    A    E+ +N     GV   P    Y  +I G  ++
Sbjct: 792  GMKPDHLAYNCLIRTFCELGDMENA----EQEVNKMKLKGV--SPSVETYNILIGGYGRK 845

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
               DK  +LL +M+D    P+VV+Y ++I   C  +   EA+ +  +M D+GV PNV  +
Sbjct: 846  YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            ++++D  C  GK+E+A +  E M + G+  N   YNTL+DG  + G++  A+++ + +  
Sbjct: 906  NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR 965

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             G K +VF+Y+ LI+GY     ++  ++LY EM + GIKPT+ TY+ L I L     +E 
Sbjct: 966  KGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIEL 1024

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              K+F EM    +  D   Y   +     +G + +A  L + +      LD  +Y+ LI 
Sbjct: 1025 TKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLIL 1081

Query: 314  GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            G  K G+L     L   +    +  +  TY+I++   C       A+  + +M+ KG+  
Sbjct: 1082 GQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLL 1141

Query: 374  DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D    + L+ G      + +   ++  M+ R
Sbjct: 1142 DVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 38/364 (10%)

Query: 9    KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
            K+K  G  P+V TY+ LI G  R        +L +EM   NG       P+ V Y T+I+
Sbjct: 822  KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM-EDNGTM-----PNVVSYGTLIN 875

Query: 69   GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
             LCK   + +A+ +   M+D+ ++P+V  YN +I G C      +A R   EM  +G++ 
Sbjct: 876  CLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIEL 935

Query: 129  NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            N+VT++ ++D L  NGK+ EA  +L  + + G++P+ F YN+L+ G+   G V R   L+
Sbjct: 936  NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995

Query: 189  VSMESMGCKHNVFSYSILI---------------------------NG----YCKNKEIE 217
              M++ G K  + +Y +LI                           NG    Y  + +++
Sbjct: 996  EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD 1055

Query: 218  GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             A +L  +M+ K I     TYN+L +G  ++ ++     L DEM+   +  +   Y   +
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115

Query: 278  DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             G C+    + A   +R ++     LD+     L+ GL +  R K A  +   +  G  +
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM-NGRKL 1174

Query: 338  ADVV 341
             DV+
Sbjct: 1175 GDVI 1178



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 145/279 (51%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA  LF  + ++G+ P+  + ++++D L K  +      +   +++   RP+ F+Y   
Sbjct: 499 SEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 558

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +        V +  ELF  M+       VF Y++LI+G CK ++++ A  L+ EML++ +
Sbjct: 559 IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P+++TYNTL  G  +    E++FK+ + M+   +      + T + GL K G + +A  
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   ++      D  ++S L DG   + +   A  ++ +     L  +  T +I+++ALC
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            +G+++KA ++     AKG+ P+ V +NT++ G  R  +
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 10/280 (3%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  +   ++  G  PNV  Y+ LI+G C  G    A    EEM     E  +V     
Sbjct: 884  LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVT---- 939

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y T+IDGL   G + +A+++LL++  K + PDV TYNS+I G+ +A +      L+ E
Sbjct: 940  --YNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M   G++P + T+ +++  LC    +E   ++     ++ ++P+  VYN ++  + + G 
Sbjct: 998  MKTSGIKPTLKTYHLLIS-LCTKEGIELTKKIFG---EMSLQPDLLVYNGVLHCYAVHGD 1053

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +++A  L   M       +  +Y+ LI G  K  ++    SL  EM ++ ++P   TY+ 
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  G  E+     A+  + EMQ  G+  D       + GL
Sbjct: 1114 IVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGL 1153



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 9/226 (3%)

Query: 184 AKELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            KELF   S+ S   KH+ FSY   S+L+N   ++K I  A  L+  + ++GI P+  + 
Sbjct: 465 PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIFPSSDSL 520

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L   L +  Q      +F  +         + Y   I    K   + + LELF  ++ 
Sbjct: 521 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 580

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    +  Y+ LIDGLCK  ++K A +LF  +    L+  ++TYN +I   C DG  +K
Sbjct: 581 DRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEK 640

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  +   M+A  + P  + FNTL+ G  +         +L  M ++
Sbjct: 641 SFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ 686



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 13/200 (6%)

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +   KE+  A SL S  L         +Y  L + L E   +  A  LF  ++  G+   
Sbjct: 462 FTSPKELFSAFSLSSPSLKHDF-----SYLLLSVLLNESKMISEAADLFFALRNEGIFPS 516

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS----YSCLIDGLCKSGRLKIAW 325
           + +    +D L K       + +F  L IL  E D R     Y   I    K   +    
Sbjct: 517 SDSLTLLLDHLVKTKQFRVTINVF--LNIL--ESDFRPSKFMYGKAIQAAVKLSDVGKGL 572

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ELF+ +    +   V  YN++I  LC   +M  A  LF +M A+ + P  + +NTL+ G 
Sbjct: 573 ELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632

Query: 386 IRNNETSKVVELLHRMDERN 405
            ++    K  ++  RM   N
Sbjct: 633 CKDGNPEKSFKVRERMKADN 652


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 189/349 (54%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C PD + YT +I+  C E  V +A +LL +M  +   PDVVTYN ++ G C     +EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +    M   G QPNV+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G + RA ++   M + GC  N  SY+ L++G+CK K+++ A+     M+S+G  P +
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTYNT+   L +  +V+ A +L +++   G +     Y T IDGL K G   +A+EL   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +R    + D+ +YS LI GL + G+++ A + FH +    +  +  TYN ++  LC   +
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D+A D    M +KG  P  V++  L+ G        + +ELL+ +  R
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 204/358 (56%), Gaps = 8/358 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+VITY+ LI   C       A+ L +EM    G  G  CKPD V Y  +++G+CKEG
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEM----GSRG--CKPDVVTYNVLVNGMCKEG 65

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+A + L  M      P+V+T+N ++R  C      +A++L  EM+ +G  P+VVTF+
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++++ LC+ G +  A  +LE M   G  PN+  YN L+ GFC   +++RA +    M S 
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CK+ +++ A+ L +++ SKG  P ++TYNT+  GL ++ + ++A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L  EM+  G+  D   Y + I GL + G + EA++ F  +     + +  +Y+ ++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 315 LCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           LCK+ +   A + L + + +G    + V+Y I+I  +  +G   +A +L  ++ ++GV
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTE-VSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 175/321 (54%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E+L +  +K   PDV+TY  +I   C  +   +A +L  EM  +G +P+VVT++V+++ +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G+++EA + L  M   G +PN   +N ++   C TGR   A++L   M   GC  +V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +++ILIN  C+   +  A+ +  +M + G  P  ++YN L  G  +  +++RA +  + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M   G   D   Y T +  LCK+G +  A+EL   L    C   + +Y+ +IDGL K G+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
              A EL H +    L  DV+TY+ +I  L  +GK+++A   F D+E  GV P+   +N+
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           +M G  +  +T + ++ L  M
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYM 322



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 178/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++ + GC+P+V+TY+ L+NG+C+ G    A+     M +    +G   +P+ +
Sbjct: 34  QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPS----YG--SQPNVI 87

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+  +C  G    A++LL +M  K  +P VVT+N +I   C       A  +  +M
Sbjct: 88  THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM+ A Q LE+M+  G  P+   YNT++   C  G+V
Sbjct: 148 PTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKV 207

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   + S GC   + +Y+ +I+G  K  + + A+ L  EM  KG+KP V+TY++L
Sbjct: 208 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSL 267

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +VE A K F +++  GV  + + Y + + GLCK      A++    +    C
Sbjct: 268 IAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGC 327

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
           +    SY+ LI+G+   G  K A EL + L  RGV+
Sbjct: 328 KPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 152/277 (54%), Gaps = 6/277 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L T++   GC P+V+T++ LIN LCR G    A+++ E+M          C P++
Sbjct: 103 MDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG------CTPNS 156

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G CKE  +D+A + L  M  +   PD+VTYN+++   C     + A  L  +
Sbjct: 157 LSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ 216

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK ++A +LL  M   G++P+   Y++L+ G    G+
Sbjct: 217 LSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A + F  +E  G K N F+Y+ ++ G CK ++ + A+   + M+SKG KPT V+Y  
Sbjct: 277 VEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTI 336

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  G+      + A +L +E+   GV   + A +  +
Sbjct: 337 LIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 154/288 (53%), Gaps = 4/288 (1%)

Query: 119 IEMMDQGVQ----PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           +E++D+ ++    P+V+T++++++  C    + +A +LL+ M   G +P+   YN L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  GR++ A +   SM S G + NV +++I++   C       A  L +EM+ KG  P+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVT+N L   L     + RA  + ++M  HG   ++ +Y   + G CK   +  A++   
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  DI +Y+ ++  LCK G++  A EL + L        ++TYN +I  L   G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           K D+A +L  +M  KG+ PD + +++L+ G  R  +  + ++  H ++
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 89/185 (48%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + +    L K   P V+TY  L         V +A KL DEM   G   D   Y   ++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           +CK G + EA++   ++     + ++ +++ ++  +C +GR   A +L   + R      
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVT+NI+I+ LC  G + +A D+   M   G  P+ +++N L+ G  +  +  + ++ L 
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 400 RMDER 404
            M  R
Sbjct: 181 IMVSR 185


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 189/365 (51%), Gaps = 10/365 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY  L+   C  G    A++L  EM    G       P   +Y   +  LCK G V +A 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVPEAM 74

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E++  MKD    PDVVT+N++I G C A   +EA+++  EM   G   N+VT++ +++ L
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHN 199
              G+  EA  +++ M      P+   YN ++ GFC +G ++RA      M +  GC  +
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            F+YSILING CK+  +  A  L  EM+  K    +VV +NTL  G  +   ++RA +L 
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M  HG A D   Y T IDGLC+ G + +   L   +    C+ D+ +Y+ L+ GLCK+
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G++  A  L   +       + VTY+++   LC   K+D A+DL   +  KG   D VAF
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371

Query: 379 NTLML 383
            TL+L
Sbjct: 372 ETLLL 376



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 179/336 (53%), Gaps = 11/336 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P    Y+  ++ LC++G    A+ + + M +G       CKPD V + T+I GLCK 
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG------ACKPDVVTFNTLIAGLCKA 102

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A+++L +M+      ++VTYN++I G   A  S EA    + M      P+  T+
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTY 159

Query: 134 SVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM- 191
           + I+   CK+G+++ A   LE M Q  G  P+ F Y+ L++G C +  + +A EL   M 
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
               C  +V +++ L++GYCK ++++ A  L S ML  G  P VVTY+T+  GL     V
Sbjct: 220 GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           ++ F L ++M   G   D   Y   + GLCK G +VEA  L + +    C  +  +YS +
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLV 339

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            DGLCK  +L +A +L  S+     + DVV +  ++
Sbjct: 340 FDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRL 117
           D   Y  ++   C  G +  A +LL +M+ +  + P    YN  +   C +    EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M D   +P+VVTF+ ++  LCK G+++EA Q+L+ M + G   N   YNTL++G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVV 236
            GR   + E  + M+ M    +  +Y+ +I+G+CK+ EI+ A     EM  + G  P   
Sbjct: 137 AGR---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           TY+ L  GL +   + +A +L  EM  R    A   A+ T +DG CK   +  A EL  +
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  D+ +YS +IDGLC+ G +   + L   +       DVVTY +++  LC  GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M +A  L   M   G  P+ V ++ +  G  + ++     +LL  + ++
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 28/304 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  +   +K   C+P+V+T++TLI GLC+ G    A  + +EM               I
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131

Query: 47  NG------NGEF-----GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPD 94
           NG      +GE      G+   PD   Y  II G CK G +D+A   L +MK +   +PD
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMD-QGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
             TY+ +I G C +++  +A  L  EM+  +    +VV F+ ++D  CK   ++ A +LL
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M++ G  P+   Y+T++DG C  G V++   L   M S GCK +V +Y++L+ G CK 
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            ++  A  L   ML  G  P  VTY+ +F GL +I +++ A  L   ++  G   D  A+
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371

Query: 274 RTFI 277
            T +
Sbjct: 372 ETLL 375



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 6/230 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TY+ +I+G C++G    A    EEM    G     C PD   Y+ +I+GLCK   +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNL 208

Query: 77  DKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            KA ELL +M   K+    VV +N+++ G+C A D + A+ L   M++ G  P+VVT+S 
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+D LC+ G +++   LLE M+  G +P+   Y  L+ G C  G++  A  L   M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           C  N  +YS++ +G CK  +++ A  L + +  KG    VV + TL + +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV 378


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 221/438 (50%), Gaps = 41/438 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G   NV T + ++N LC+ G          E+     E GV   PD V 
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEV----QEKGVY--PDIVT 262

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I     +G +++A EL+  M  K  +P V TYN+VI G C       AK +F EM+
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T+  ++ E CK G   E   +   M    V P+   ++++M  F  +G ++
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A   F S++  G   +   Y+ILI GYC+   I  A++L +EML +G    VVTYNT+ 
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A KLF+EM   G+  D++     IDG CK G +  A+ELF+ ++  + +
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH-- 360
           LD+ +Y+ L+DG  K G +  A E++  +    ++   ++++I+++ALC+ G + +A   
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562

Query: 361 --------------------------------DLFLD-MEAKGVAPDCVAFNTLMLGCIR 387
                                           ++FL+ M ++G  PDC+++NTL+ G ++
Sbjct: 563 WDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVK 622

Query: 388 NNETSKVVELLHRMDERN 405
               SK   L+ +M+E+ 
Sbjct: 623 EENMSKAFGLVKKMEEKQ 640



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 207/406 (50%), Gaps = 10/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   G  P+  TY +L+   C+ G  +   N+F +M + +    VV  PD V
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD----VV--PDLV 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +++++    + G +DKA      +K+  + PD V Y  +I+G+C     +EA  L  EM
Sbjct: 367 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   +VVT++ I+  LCK   + EA +L   M + G+ P+++    L+DG C  G +
Sbjct: 427 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ELF  M+    K +V +Y+ L++G+ K  +I+ A  ++++M+SK I PT ++++ L
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     +  AF+++DEM    +        + I G C++G   +  E+F    I + 
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG-EIFLEKMISEG 605

Query: 302 EL-DIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKMDK 358
            + D  SY+ LI G  K   +  A+ L   +   +G L+ DV TYN ++H  C + +M +
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  +   M  +GV PD   + +L+ G +  +  ++       M +R
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQR 711



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 192/376 (51%), Gaps = 8/376 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   +F+ +++    P+++ +S++++   R+G+   AL  F    N   E G++  PD 
Sbjct: 347 VETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 400

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +I G C++G + +A  L  +M  +    DVVTYN+++ G C      EA +LF E
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P+  T ++++D  CK G ++ A +L + M +  ++ +   YNTL+DGF   G 
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ AKE++  M S        S+SIL+N  C    +  A  ++ EM+SK IKPTV+  N+
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G              ++M   G   D  +Y T I G  K   + +A  L + +   +
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640

Query: 301 CEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L  D+ +Y+ ++ G C+  ++K A  +   +    +  D  TY  +I+   +   + +
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700

Query: 359 AHDLFLDMEAKGVAPD 374
           A     +M  +G +PD
Sbjct: 701 AFRFHDEMLQRGFSPD 716



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 158/319 (49%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  L + G+V+ A  +  ++    +  +V T N ++   C      +      E+ ++G
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P++VT++ ++      G MEEA +L+  M   G  P  + YNT+++G C  G+  RAK
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F  M   G   +  +Y  L+   CK  +     +++S+M S+ + P +V ++++    
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +++A   F+ ++  G+  D   Y   I G C+ G I EA+ L   +    C +D+
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ ++ GLCK   L  A +LF+ +    L  D  T  I+I   C  G +  A +LF  
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M+ K +  D V +NTL+ G
Sbjct: 496 MKEKRIKLDVVTYNTLLDG 514



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 17/365 (4%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN-------INPDVVTYNS--------- 100
           K  ++  + +I  L + G +  A+  +L+M  ++       +N  V TY++         
Sbjct: 100 KHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFD 159

Query: 101 -VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            +IR F  A    EA   F  +  +G   ++   + ++  L + G +E A ++ + + + 
Sbjct: 160 LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS 219

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV  N +  N +++  C  G++ +       ++  G   ++ +Y+ LI+ Y     +E A
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L   M SKG  P V TYNT+  GL +  + ERA ++F EM R G++ D+  YR+ +  
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
            CK G  VE   +F  +R      D+  +S ++    +SG L  A   F+S+    LI D
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            V Y I+I   C  G + +A +L  +M  +G A D V +NT++ G  +     +  +L +
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459

Query: 400 RMDER 404
            M ER
Sbjct: 460 EMTER 464



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 126/275 (45%), Gaps = 18/275 (6%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           ++ S ++  L ++G++ +A   +  MI+        + N+L+  +               
Sbjct: 104 LSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYS-------------- 149

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
                C  N   + +LI  + + +++  A   ++ + SKG   ++   N L   L  I  
Sbjct: 150 ----NCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGW 205

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           VE A++++ E+ R GV  + +     ++ LCK+G + +       ++      DI +Y+ 
Sbjct: 206 VELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI      G ++ A+EL H++P       V TYN +I+ LC  GK ++A ++F +M   G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++PD   + +L++   +  +  +   +   M  R+
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 200/400 (50%), Gaps = 2/400 (0%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++     P+V+T+  L+N LC+      AL +F+ +    G   V  +PD V++ T
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNT 362

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +IDGLCK G  +    LL +MK  NIN P+ VTYN +I GF  A + + A  LF +M ++
Sbjct: 363 LIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE 422

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GVQPNV+T + ++D LCK+G++  A +    M   G++ NA  Y  L+  FC    +NRA
Sbjct: 423 GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRA 482

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            + F  M S GC  +   Y  LI+G C    +  A  + S++   G       YN L  G
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++ER ++L  EM+  GV  DT  Y T I  L K G    A ++   +        
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           + +Y  +I   C    +    ++F  +     +  + V YNI+I ALC +  +D+A  L 
Sbjct: 603 VVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLM 662

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            DM+ K V P+   +N ++ G        K  EL+ RM E
Sbjct: 663 EDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 168/393 (42%), Gaps = 72/393 (18%)

Query: 2   EAAALFTKLKA------FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------ 49
           EA  +F +L+        G EP+V+ ++TLI+GLC+ G     L+L EEM  GN      
Sbjct: 334 EALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNT 393

Query: 50  -------------GEFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
                        G F               +P+ +   T++DGLCK G V +A E   +
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           MK K +  +  TY ++I  FC  N+ N A + F EM+  G  P+ V +  ++  LC  G+
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGR 513

Query: 146 MEEAS-----------------------------------QLLELMIQIGVRPNAFVYNT 170
           M +AS                                   +LL  M + GV+P+   YNT
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+     TG    A ++   M   G + +V +Y  +I+ YC  K ++  + ++ EM S  
Sbjct: 574 LISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTS 633

Query: 231 -IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + P  V YN L   L   + V+RA  L ++M+   V  +T  Y   + G+     + +A
Sbjct: 634 KVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
            EL   +    C  D  +   L + L   G ++
Sbjct: 694 FELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 185/406 (45%), Gaps = 15/406 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF +L      P +     L+  L ++G    AL++ +EM   N  F V  +   +++  
Sbjct: 163 LFNQLDPSSKSPQLC--HGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGE---IVFGE 217

Query: 66  IIDGLCKEGFVD-KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++       F D +   L+ ++ ++ + PD      ++   C    +  A  +   +M  
Sbjct: 218 LVRS--GRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRL 275

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   +  + + ++  L +   ++  ++LL  M +  +RP+   +  L++  C   R++ A
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335

Query: 185 KELFVSMES------MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPTVVT 237
            ++F  +        +G + +V  ++ LI+G CK  + E  LSL  EM    I +P  VT
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  G F+    +RA +LF +M   GV  +     T +DGLCK+G +  A+E F  ++
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +  +Y+ LI   C    +  A + F  +       D V Y  +I  LC  G+M+
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMN 515

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +   ++  G + D   +N L+ G  +  +  +V ELL  M+E
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEE 561



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 137/334 (41%), Gaps = 65/334 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM----INGNGE------ 51
            A  LF ++   G +PNVIT +TL++GLC+ G    A+  F EM    + GN        
Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALI 470

Query: 52  -------------------FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C PDAV+Y ++I GLC  G ++ A  ++ ++K    +
Sbjct: 471 SAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFS 530

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            D   YN +I GFC          L  EM + GV+P+ +T++ ++  L K G    AS++
Sbjct: 531 LDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKV 590

Query: 153 LELMIQIGVRP------------------------------------NAFVYNTLMDGFC 176
           +E MI+ G+RP                                    N  +YN L+D  C
Sbjct: 591 MEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALC 650

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
               V+RA  L   M+    + N  +Y+ ++ G    K +  A  L   M+ +  +P  +
Sbjct: 651 RNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYI 710

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           T   L   L  + ++E+     +  Q     A +
Sbjct: 711 TMEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASS 744



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLC---KNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           L  ++   GV  D +     +  LC   KNG    A E+   +  L   +D  S + L+ 
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGV---AWEVLHCVMRLGGAVDAASCNALLT 289

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--- 370
            L +   +K   EL   + +  +   VVT+ I+++ LC   ++D+A  +F  +  KG   
Sbjct: 290 WLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSN 349

Query: 371 ---VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              V PD V FNTL+ G  +  +    + LL  M   N
Sbjct: 350 WVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN 387


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 209/403 (51%), Gaps = 6/403 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA ALF ++KA GC P+V+TY++LI+G  + G       L  EM          C  D 
Sbjct: 216 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG------CAADV 269

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I+   K G+++KA     +MK   +  +VVT ++ +  FC      EA +LF +
Sbjct: 270 VTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQ 329

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN  T++ ++D  CK G++++A  LL+ M+  G+ PN   Y  ++DG C  G+
Sbjct: 330 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 389

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++   ME  G K N   Y+ LI+G+  NK  E AL L +EM +KG++  V  Y T
Sbjct: 390 VAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGT 449

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ +++ A  L  +M   G+  +T  Y T +D   K G   EA+ L   +    
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ +Y  LIDGLCK+G +  A   F  +    L  +V  Y  +I   C  G + KA 
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            L  +M  KG++ D V + +L+ G ++  +      L  +M E
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 197/399 (49%), Gaps = 10/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  L A    PNV T++ +I+ LC+ G  + A  LF  M        + C PD V Y +
Sbjct: 190 LFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRMK------AMGCSPDVVTYNS 239

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG  K G +++ + L+ +M+      DVVTYN++I  F       +A   F EM   G
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V  NVVT S  +D  CK G + EA +L   M   G+ PN F Y +L+DG C  GR++ A 
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M   G   NV +Y+++++G CK  ++  A  + S M   G+K   + Y TL  G 
Sbjct: 360 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F     ERA  L +EM+  G+  D   Y T I GLCK   + EA  L   +       + 
Sbjct: 420 FMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNT 479

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ ++D   K+G+   A  L H +P   L  +VVTY  +I  LC  G + +A   F  
Sbjct: 480 VIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDK 539

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M   G+ P+   + TL+ G  +    SK V L++ M ++
Sbjct: 540 MRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 188/367 (51%), Gaps = 6/367 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G  PN  TY++L++G C+ G    A+ L +EM++     G+V  P+ V
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVV 375

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLCKEG V  A ++L  M+   +  + + Y ++I G     +S  A  L  EM
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +V  +  ++  LCK  K++EA  LL  M   G+RPN  +Y T+MD F   G+ 
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   +   G + NV +Y  LI+G CK   I  A+S + +M   G+ P V  Y TL
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I  + +A  L +EM   G++ D   Y + IDG  K G +  A  L   +     
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+  Y+C I G C    ++ A  +   +    +  D   YN +I      G M++A  
Sbjct: 616 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASS 675

Query: 362 LFLDMEA 368
           L  +ME+
Sbjct: 676 LQNEMES 682



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 156/293 (53%), Gaps = 4/293 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A R    +    V PN  T + I+  L +N +     +L E +      PN F +N +
Sbjct: 150 DDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIV 205

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  G +  A+ LFV M++MGC  +V +Y+ LI+GY K  E+E    L SEM   G 
Sbjct: 206 IDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGC 265

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              VVTYN L     +   +E+A+  F EM+R GV A+     TF+D  CK G + EA++
Sbjct: 266 AADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMK 325

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R+     +  +Y+ L+DG CK+GRL  A  L   +    L+ +VVTY +M+  LC
Sbjct: 326 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 385

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +GK+  A D+   ME  GV  + + + TL+ G   N  + + ++LL+ M  +
Sbjct: 386 KEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 6/193 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+   G +PNV+TY  LI+GLC+ G    A++ F++M     E G+   P+  
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKM----RELGL--DPNVQ 550

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YTT+IDG CK G + KA  L+ +M DK ++ D V Y S+I G     D   A  L  +M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  ++  +   C    M+EA  +L  MI  G+ P+   YN L+  +   G +
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 182 NRAKELFVSMESM 194
             A  L   MES+
Sbjct: 671 EEASSLQNEMESV 683


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 218/435 (50%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +K  G  P + T++ +++   +   T     L+ EM      F +  K    
Sbjct: 184 DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM------FRLKIKSTVY 237

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LCKEG + KAK+ +  M++  + P+VVTYN+VI G+C       A+ +   M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
            ++GV+P+  T+  ++  +CK GK+EEAS +LE M +IG+ P A  YNTL+DG+C     
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 177 ------------------------------LTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                         L G+++ A  +   M   G   +  +Y+IL
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           INGYC+    + A +L+ EM+SKGI+PT+VTY +L   L + ++++ A  LF+++ R G 
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           + D   +   IDG C NG +  A  L + +       D  +Y+ L+ G C+ G+++ A E
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   + R  +  D ++YN +I      G ++ A  +  +M + G  P  + +N L+ G  
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597

Query: 387 RNNETSKVVELLHRM 401
           +N +     ELL  M
Sbjct: 598 KNQQGDLAEELLKEM 612



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 6/316 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +  K+K  G  P  +TY+TLI+G C  G  + A    +EM+           P   
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR------AILPTVS 377

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  L  EG +D+A  ++  M D  I PD +TYN +I G+C   ++ +A  L  EM
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP +VT++ ++  L K  +M+ A  L E +I+ G  P+  ++N L+DG C  G +
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   M+      +  +Y+ L+ G C+  ++E A  L  EM  +GI+P  ++YNTL
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  AF + DEM   G       Y   I GLCKN     A EL + +     
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617

Query: 302 ELDIRSYSCLIDGLCK 317
             D  +Y  LI+G+ K
Sbjct: 618 TPDDSTYFSLIEGIGK 633



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 35/380 (9%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++++  +I   C+    D A E    MK+K + P + T+N+++  F   N +     L+ 
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM    ++  V TF+++++ LCK GK+++A   +  M  +GV+PN   YNT++ G+C  G
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RV  A+ +   M++ G + + ++Y  LI+G CK  ++E A  +  +M   G+ PT VTYN
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRH----------------------------------- 264
           TL  G      + +AF   DEM R                                    
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  D+  Y   I+G C+ G   +A  L   +     +  + +Y+ LI  L K  R+K A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +LF  + R     D++ +N +I   CA+G +D+A  L  +M+ + + PD V +NTLM G
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 385 CIRNNETSKVVELLHRMDER 404
             R  +  +  ELL  M  R
Sbjct: 526 RCREGKVEEARELLKEMKRR 545



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 181/352 (51%), Gaps = 9/352 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G EP+  TY +LI+G+C+ G    A  + E+M     E G++  P AV Y T+IDG
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM----KEIGLL--PTAVTYNTLIDG 350

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C +G + KA     +M  + I P V TYN +I         +EA  +  +M D G+ P+
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD 410

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            +T++++++  C+ G  ++A  L + MI  G++P    Y +L+       R+  A +LF 
Sbjct: 411 SITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            +   G   ++  ++ LI+G+C N  ++ A +L  EM  + I P  VTYNTL  G     
Sbjct: 471 KIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG 530

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +VE A +L  EM+R G+  D  +Y T I G  K G I +A  +   +  +     + +Y+
Sbjct: 531 KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYN 590

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LI GLCK+ +  +A EL   +    +  D  TY  +I  +   GK+D + +
Sbjct: 591 ALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSE 639



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 139/253 (54%), Gaps = 6/253 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G  P+ ITY+ LING CR G+   A NL +EMI+         +P  V
Sbjct: 394 EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG------IQPTLV 447

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  L K   +  A +L  ++  +  +PD++ +N++I G C   + + A  L  EM
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M   C+ GK+EEA +LL+ M + G+RP+   YNTL+ G+   G +
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  +   M S+G    + +Y+ LI G CKN++ + A  L  EM+SKGI P   TY +L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 242 FIGLFEIHQVERA 254
             G+ ++     A
Sbjct: 628 IEGIGKVDDSSEA 640



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 35/273 (12%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           ++ V++ L+   C   R + A E F  M+  G    + +++ +++ + K  + E    LY
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +EM    IK TV T+N +   L +  ++++A      M+  GV  +   Y T I G C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS------LP----- 332
           G +  A  +   ++    E D  +Y  LI G+CK G+L+ A  +         LP     
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 333 ------------------------RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
                                   R  ++  V TYN++IHAL  +GKMD+A  +  DM  
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            G+ PD + +N L+ G  R     K   L   M
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 42/186 (22%)

Query: 1   MEAAA-LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           M+AA  LF K+   G  P++I ++ LI+G C  G+   A  L +EM   N        PD
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN------IVPD 515

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD------------------------- 94
            V Y T++ G C+EG V++A+ELL +MK + I PD                         
Sbjct: 516 EVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRD 575

Query: 95  ----------VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
                     ++TYN++I+G C     + A+ L  EM+ +G+ P+  T+  +++ + K  
Sbjct: 576 EMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVD 635

Query: 145 KMEEAS 150
              EAS
Sbjct: 636 DSSEAS 641


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V+TY+T+++  C+ G    AL L  +M     + G  C P+ V Y  +++GL   
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQM----QKMG--CLPNDVTYNVLVNGLSHS 238

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++AKEL+ +M    +     TY+ +IRG+C     +EA RL  EM+ +G  P +VT+
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + IM  LCK G++ +A +LL++M+   + P+   YNTL+ G+   G +  A  LF  +  
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V +Y+ LI+G C+  +++ A+ L  EM+  G  P V T+  L  G  ++  +  
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +LFDEM   G+  D +AY T I G  K G   +A  +   +       D+ +Y+  ID
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K G LK A EL   +    L+ D VTY  +IHA    G + KA  +FL+M +KG+ P
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538

Query: 374 DCVAFNTLM 382
             V +  L+
Sbjct: 539 SVVTYTVLI 547



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 209/392 (53%), Gaps = 4/392 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + + +TY+ +++ L R G    A  + E++++   E GVV      +   I     K+
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIY---AKK 132

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIEMMDQGVQPNVVT 132
             ++K   +  +M  K + PD+   N V+R     + S + A+ ++  M++ G++P VVT
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D  CK GK++EA QLL  M ++G  PN   YN L++G   +G + +AKEL   M 
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G + + ++Y  LI GYC+  +++ A  L  EMLS+G  PT+VTYNT+  GL +  +V 
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A KL D M    +  D  +Y T I G  + G I EA  LF  LR       + +Y+ LI
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DGLC+ G L +A  L   + +     DV T+ I++   C  G +  A +LF +M  +G+ 
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           PD  A+ T ++G ++  + SK   +   M  R
Sbjct: 433 PDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 186/326 (57%), Gaps = 6/326 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+  G  P+V+TY+TLI+GLCR G   VA+ L +EMI    +      PD  
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPD------PDVF 401

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++ G CK G +  AKEL  +M ++ + PD   Y + I G     D ++A  +  EM
Sbjct: 402 TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+++T++V +D L K G ++EAS+L++ M+  G+ P+   Y +++    + G +
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 521

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ +F+ M S G   +V +Y++LI+ Y     ++ A+  + EM  KG+ P V+TYN L
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++++A+K F EMQ  G++ + + Y   I+  C  G+  EAL L++ +   + 
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 641

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWEL 327
           + D  ++S L+  L K  +  +   L
Sbjct: 642 QPDSCTHSALLKHLNKDYKSHVVRHL 667



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 211/445 (47%), Gaps = 64/445 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  L  +++  GC PN +TY+ L+NGL  +G    A  L +EM               I
Sbjct: 208 EALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLI 267

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  E G +                P  V Y TI+ GLCK G V  A++LL  M +KN+ 
Sbjct: 268 RGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 327

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+V+YN++I G+    +  EA  LF E+  +G+ P+VVT++ ++D LC+ G ++ A +L
Sbjct: 328 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRL 387

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI+ G  P+ F +  L+ GFC  G +  AKELF  M + G + + F+Y   I G  K
Sbjct: 388 KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 447

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A  +  EML++G  P ++TYN    GL ++  ++ A +L  +M  +G+  D   
Sbjct: 448 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507

Query: 273 YRTFIDGLCKNGYIVEALELFR------------TLRILKCELDIR-------------- 306
           Y + I      G++ +A  +F             T  +L     +R              
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 307 ---------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                    +Y+ LI+GLCK  ++  A++ F  +    +  +  TY I+I+  C  G   
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L+ DM  + + PD    + L+
Sbjct: 628 EALRLYKDMLDREIQPDSCTHSALL 652



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 33/282 (11%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G + + +T++VI+D L +NG M  A                         +C+  +V   
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSA-------------------------YCVMEKV--- 107

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             + V ME+      +    + I  Y K   +E  L ++ +M+SKG+ P +   N +   
Sbjct: 108 --VSVKMENGVVDVLILDLLLWI--YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRL 163

Query: 245 LFEI-HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L +    ++ A ++++ M   G+      Y T +D  CK G + EAL+L   ++ + C  
Sbjct: 164 LRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLP 223

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  +Y+ L++GL  SG L+ A EL   + R  L     TY+ +I   C  G++D+A  L 
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +M ++G  P  V +NT+M G  +    S   +LL  M  +N
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 325


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 209/401 (52%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++  G E N++ Y  +++  C  G T  A  + E +            P+ V
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG------LSPNVV 289

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT ++ G CK+G +++A+ ++ +MK+  +I  D V Y  +I G+C     ++A R+  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G+  N+  ++ +++ LCK G+MEE  ++L+ M  +G+RP+ + YNTL+DG+C  G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A E+   M   G      +Y+ L+ G+C    I+ AL L+  ML +G+ P  ++ +T
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF+  + E+A  L+ E    G+A +   + T I+GLCK G + EA EL   ++ L+
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y  L DG CK G+L  A  L + +        V  +N  I       +  K +
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+  +M A+G++P+ V +  L+ G  +     +   L   M
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 210/403 (52%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA ++ +++  G  P+  T + +    CR G    A+   EEM       G+  + + V 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM------EGMGLEVNLVA 255

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++D  C  G+ + A+ +L  ++ K ++P+VVTY  +++G+C      EA+R+  EM 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + G +  + V + ++++  C+ G+M++A+++   M   G+  N FVYNT+++G C  GR+
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              +++   ME +G + + +SY+ LI+GYC+   +  A  +   M+  G+  T +TYNTL
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +H ++ A +L+  M + GVA +  +  T +DGL K G   +AL L++       
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +++ +I+GLCK GR+  A EL   +       D +TY  +    C  G++  A  
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G AP    FN+ + G     +  KV ++   M  R
Sbjct: 556 LMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 229/498 (45%), Gaps = 102/498 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  G   N+  Y+T+INGLC+ G       + +EM +      V  +PD  
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRPDKY 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C+EG + KA E+   M    +    +TYN++++GFC  +  ++A RL+  M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
           + +GV PN                                   V+TF+ +++ LCK G+M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG----------- 195
            EA +LL+ M ++   P++  Y TL DG+C  G++  A  L   ME +G           
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 196 ------------------------CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
                                      N+ +Y  LI G+CK   +  A +LY EM++ G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 232 KPTVVTYNTLFIGLFEIHQVERA----FKLFD------------EMQRHGVAADTWA--- 272
            P V   + L    ++  +V+ A     KL +            E+ +     DT A   
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 273 -------YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                  +   I GLCK+G I +A  LF +LR  +   D  +YS LI G   SG +  A+
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   +    L  +++TYN +I+ LC  GK+ +A +LF  +++KG++P+ + +NTL+   
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T++  +L  +M E
Sbjct: 816 CKEGKTTEAFKLKQKMVE 833



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 199/433 (45%), Gaps = 86/433 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ +  A G   NVIT++T+INGLC+ G    A  L + M        + C PD++
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSL 535

Query: 62  IYTTIIDGLCKEGFVDKAKELL-----------------------------------LQM 86
            Y T+ DG CK G +  A  L+                                    +M
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             + ++P++VTY ++I G+C   + +EA  L+ EM++ G+ PNV   S +M    K GK+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 147 EEASQLLELMIQIGVRPNAFV--------------------------YNTLMDGFCLTGR 180
           +EA+ +L+ ++ I + P   +                          +N ++ G C +GR
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  AK LF S+ +     + F+YS LI+G   +  I+ A SL   MLS G+ P ++TYN+
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++ RA  LF+++Q  G++ +   Y T ID  CK G   EA +L +      
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK----- 830

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                         + + G ++ A +L   +    +  + +TY  +IH     G M++  
Sbjct: 831 --------------MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 876

Query: 361 DLFLDMEAKGVAP 373
            L+ +M  +G+ P
Sbjct: 877 KLYDEMHIRGLLP 889



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 193/388 (49%), Gaps = 9/388 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           + +++  L+      G    ALN+F+    G G+ G  C+P       +++ L + G   
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFD----GMGKVG--CRPSLRSCNRLLNKLVQSGDPG 200

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  +  QM+   + PD  T   + + +C      +A     EM   G++ N+V +  +M
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-C 196
           D  C  G  E+A ++LE + + G+ PN   Y  L+ G+C  GR+  A+ +   M+  G  
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +  +Y ++INGYC+   ++ A  + +EM   GI   +  YNT+  GL ++ ++E   K
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM+  G+  D ++Y T IDG C+ G + +A E+ R +          +Y+ L+ G C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 317 KSGRLKIAWEL-FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
               +  A  L F  L RGV   + ++ + ++  L   GK ++A +L+ +  A+G+A + 
Sbjct: 441 SLHAIDDALRLWFLMLKRGV-APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + FNT++ G  +    ++  ELL RM E
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKE 527



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 48/308 (15%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           + +++ A G  PN++TY  LI G C+ G+   A NL+ EM+N NG       P+  I + 
Sbjct: 591 IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN-NG-----MNPNVFICSA 644

Query: 66  IIDGLCKEGFVDKAKELLLQM--------------------------KDKNINPDVVTYN 99
           ++    KEG VD+A  +L ++                           D N +   V +N
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            +I G C +    +AK LF  + ++   P+  T+S ++     +G ++EA  L ++M+  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE---- 215
           G+ PN   YN+L+ G C +G+++RA  LF  ++S G   N  +Y+ LI+ YCK  +    
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 216 ------------IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
                       +E A+ L  +M+   + P  +TY TL  G  +   +E   KL+DEM  
Sbjct: 825 FKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 884

Query: 264 HGVAADTW 271
            G+    W
Sbjct: 885 RGLLPTNW 892



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 22/184 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF  L+     P+  TYS+LI+G   +G    A +L + M++          P+ +
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG------LTPNII 771

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLCK G + +A  L  +++ K I+P+ +TYN++I  +C    + EA +L  +M
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831

Query: 122 MDQG----------------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           +++G                V PN +T+  ++    K+G MEE S+L + M   G+ P  
Sbjct: 832 VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891

Query: 166 FVYN 169
           ++ N
Sbjct: 892 WIGN 895


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 203/396 (51%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G +PN  TY+ +I  LC+TG    A  +  EMI+     G+   PD VIYTT
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE----GIA--PDGVIYTT 263

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK G V  A  L  +M+ + I+PD +TY +VI G C      EA +LF EM+ + 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+ VT++ ++D  CK GKM+EA  L   M+Q+G+ PN   Y  L DG C  G V+ A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M   G + N+++Y+ L+NG CK   I+ A+ L  +M   G  P  VTY TL    
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++ RA +L  +M    +      +   ++G C +G + +  +L + +       + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI   C    ++   E++  +    ++ D  TYNI+I   C    M +A  L  D
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  KG      ++N L+ G  +  +  +  EL  +M
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ + G  P+ + Y+TLI+G C+ G+   A  LF+EM            PD +
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK------ISPDFI 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLC+ G V +A +L  +M  K + PD VTY ++I G+C      EA  L  +M
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN+VT++ + D LCK G+++ A++LL  M + G+  N + YN+L++G C  G +
Sbjct: 355 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 414

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +L   ME  G   +  +Y+ L++ YCK++E+  A  L  +ML + ++PTVVT+N L
Sbjct: 415 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +E   KL   M   G+  +   Y + I   C    +    E++R +     
Sbjct: 475 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 534

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LI G CK+  +K AW L   +        V +YN +I       K  +A +
Sbjct: 535 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594

Query: 362 LFLDMEAKGVAPDCVAFN 379
           LF  M  +G+  D   +N
Sbjct: 595 LFEQMRREGLVADREIYN 612



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 183/358 (51%), Gaps = 12/358 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---PD 59
           A  LF +++     P+ ITY+ +I GLC+TG  + A  LF EM         VCK   PD
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM---------VCKRLEPD 327

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V YT +IDG CKEG + +A  L  QM    + P++VTY ++  G C   + + A  L  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G++ N+ T++ +++ LCK G +++A +L++ M   G  P+A  Y TLMD +C + 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            + RA EL   M     +  V ++++L+NG+C +  +E    L   ML KGI P   TYN
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L       + +    +++  M   GV  D   Y   I G CK   + EA  L R +   
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              L + SY+ LI G  K  +   A ELF  + R  L+AD   YNI       +GKM+
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 11/364 (3%)

Query: 39  LNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           L L EEM I G        KP+   Y  +I  LCK G V +A+ +L +M  + I PD V 
Sbjct: 208 LKLIEEMQIKG-------LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y ++I GFC   + + A RLF EM  + + P+ +T++ ++  LC+ G++ EA +L   M+
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              + P+   Y  L+DG+C  G++  A  L   M  MG   N+ +Y+ L +G CK  E++
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM  KG++  + TYN+L  GL +   +++A KL  +M+  G   D   Y T +
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           D  CK+  +V A EL R +   + +  + +++ L++G C SG L+   +L   +    ++
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVE 396
            +  TYN +I   C    M    +++  M AKGV PD   +N L+ G C   N   K   
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN--MKEAW 558

Query: 397 LLHR 400
            LHR
Sbjct: 559 FLHR 562



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 6/344 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  LF ++     EP+ +TY+ LI+G C+ G    A +L  +M+    + G+   P+ 
Sbjct: 310 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNI 363

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT + DGLCK G VD A ELL +M  K +  ++ TYNS++ G C A + ++A +L  +
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ VT++ +MD  CK+ +M  A +LL  M+   ++P    +N LM+GFC++G 
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 483

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +   ++L   M   G   N  +Y+ LI  YC    +     +Y  M +KG+ P   TYN 
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ A+ L  +M   G      +Y   I G  K    +EA ELF  +R   
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              D   Y+   D     G++++  EL        L+ D+ T N
Sbjct: 604 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 7/298 (2%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNG-------KMEEASQLLELMIQIGVRPNAF 166
           A++LF +M++ G+  +V + ++ +  L ++        K E   +L+E M   G++PN +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN ++   C TG+V  A+ +   M S G   +   Y+ LI+G+CK   +  A  L+ EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             + I P  +TY  +  GL +  +V  A KLF EM    +  D   Y   IDG CK G +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            EA  L   +  +    +I +Y+ L DGLCK G +  A EL H + R  L  ++ TYN +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++ LC  G +D+A  L  DME  G  PD V + TLM    ++ E  +  ELL +M +R
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 6/239 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   ++  G  P+ +TY+TL++  C++   + A  L  +M++         +P  V
Sbjct: 416 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE------LQPTVV 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++G C  G ++  ++LL  M +K I P+  TYNS+I+ +C  N+      ++  M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  T+++++   CK   M+EA  L   M+  G       YN L+ GF    + 
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A+ELF  M   G   +   Y+I  +      ++E  L L  E + K +   + T NT
Sbjct: 590 LEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 42/193 (21%)

Query: 251 VERAFKLFDEM------------------------------------------QRHGVAA 268
           V  A KLFD+M                                          Q  G+  
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           + + Y   I  LCK G + EA  + R +       D   Y+ LIDG CK G +  A+ LF
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + +  +  D +TY  +I  LC  G++ +A  LF +M  K + PD V +  L+ G  + 
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 389 NETSKVVELLHRM 401
            +  +   L ++M
Sbjct: 342 GKMKEAFSLHNQM 354


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 183/314 (58%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A+F  +K+FG  P+V +YS LI+GL + G      N+F+ M      F +    DA  Y 
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG--FAL----DARAYN 599

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++DGLCK G VDKA E+L +MK K+++P V TY S++ G    +  +EA  LF E   +
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ +S ++D   K G+++EA  +LE M++ G+ PN + +N+LMD    T  ++ A
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P VVTY T+  G
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISG 779

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++  +  A+ LF+  + +G   D+ ++   I+G+      +EA ++F   R+  C L+
Sbjct: 780 LAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLN 839

Query: 305 IRSYSCLIDGLCKS 318
           +++   L+D L K+
Sbjct: 840 VKTCISLLDALNKT 853



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 205/398 (51%), Gaps = 6/398 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F      GC PN +TY +LI+GL + G    A  LFE+M++   +       + +
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD------ANPI 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT++I      G  +   ++  +M  +   PD+   N+ +     A +  + + +F +M
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM 551

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V ++S+++  L K G+  E S + + M Q G   +A  YN ++DG C +G+V
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   M+       V +Y  +++G  K   ++ A  L+ E  SKGI+  V+ Y++L
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +EM + G+  + + + + +D L K   I EAL  F++++ +KC
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  LI +VVTY  MI  L   G +  A+ 
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYS 791

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LF   +  G  PD  +FN L+ G    N   +  ++  
Sbjct: 792 LFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFE 829



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 204/402 (50%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +L+  GC P+V+++++++  L +      AL LF+ M           KP+  
Sbjct: 334 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-------AKPNIS 386

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID LC  G V++A ++  +M+   + P++++ N ++   C AN   EA R+F   
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PN VT+  ++D L K GK+++A +L E M+  G   N  +Y +L+  F + GR 
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M   G + ++   +  ++   K  E+E   +++ +M S G  P V +Y+ L
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q      +F  M + G A D  AY   +DGLCK+G + +A E+   +++   
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y  ++DGL K  RL  A+ LF       +  +V+ Y+ +I      G++D+A+ 
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +M  KG+ P+   +N+LM   ++  E  + +     M E
Sbjct: 687 ILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 207/413 (50%), Gaps = 34/413 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---------------MIN 47
           A   F +LKA G  P+ ++Y++++  LC+ G    A  LF +               MI 
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324

Query: 48  GNG----------------EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           G G                E G  C P  V + +I+  L K+  VD+A  L   MK K+ 
Sbjct: 325 GYGSAERFDDAYKLLERLRERG--CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDA 381

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P++ TYN +I   C A   NEA ++  EM   G+ PN+++ ++++D LCK  ++EEA +
Sbjct: 382 KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHR 441

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           + E   + G  PN+  Y +L+DG    G+++ A  LF  M   G   N   Y+ LI  + 
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +   E    +Y EM+ +G +P +   NT    +F+  +VE+   +F++M+  G   D  
Sbjct: 502 MHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVR 561

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           +Y   I GL K G   E   +F+ +      LD R+Y+ ++DGLCKSG++  A+E+   +
Sbjct: 562 SYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM 621

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               +   V TY  ++  L    ++D+A+ LF + ++KG+  + + +++L+ G
Sbjct: 622 KVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 202/399 (50%), Gaps = 6/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G  PN+++ + +++ LC+      A  +FE       E G  C P++V
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA----SERG--CNPNSV 456

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++IDGL K+G +D A  L  +M D   + + + Y S+IR F       +  +++ EM
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P++   +  MD + K G++E+   + E M   G  P+   Y+ L+ G    G+ 
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                +F +M   G   +  +Y+ +++G CK+ +++ A  +  EM  K + PTV TY ++
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +I +++ A+ LF+E +  G+  +   Y + IDG  K G I EA  +   +     
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +++ L+D L K+  +  A   F S+       +  TY+I+I+ LC   K +KA  
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            + +M+ +G+ P+ V + T++ G  +    +    L  R
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 43/423 (10%)

Query: 1   MEAA-ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           ME A AL  ++K    EP+++ Y+  I+   + G   +A   F E+   +G      +PD
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL-KAHG-----LRPD 280

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V YT+++  LCK G + +A+EL  QM+ +   P    YN++I G+  A   ++A +L  
Sbjct: 281 DVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLE 340

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + ++G  P+VV+F+ I+  L K  K++EA  L ++M +   +PN   YN ++D  C+ G
Sbjct: 341 RLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAG 399

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           RVN A ++   ME  G   N+ S +I+++  CK  ++E A  ++     +G  P  VTY 
Sbjct: 400 RVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYC 459

Query: 240 TLFIGLFEIHQVERAFKLFD-----------------------------------EMQRH 264
           +L  GL +  +++ A++LF+                                   EM R 
Sbjct: 460 SLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D     T++D + K G + +   +F  ++      D+RSYS LI GL K+G+ +  
Sbjct: 520 GGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARET 579

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +F ++ +     D   YN ++  LC  GK+DKA+++  +M+ K V P    + +++ G
Sbjct: 580 SNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639

Query: 385 CIR 387
             +
Sbjct: 640 LAK 642



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 36/372 (9%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN-------------------------- 90
           +P    YT +I  L +    ++A ELL QM+D                            
Sbjct: 173 RPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALA 232

Query: 91  ---------INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
                    + PD+V YN  I  F  A   + A + F E+   G++P+ V+++ ++  LC
Sbjct: 233 LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G++ EA +L   M      P A+ YNT++ G+    R + A +L   +   GC  +V 
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVV 352

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S++ ++    K ++++ AL+L+ +++ K  KP + TYN +   L    +V  A+K+ DEM
Sbjct: 353 SFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G+  +  +    +D LCK   + EA  +F +     C  +  +Y  LIDGL K G++
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKI 471

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+ LF  +      A+ + Y  +I      G+ +  H ++ +M  +G  PD    NT 
Sbjct: 472 DDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTY 531

Query: 382 MLGCIRNNETSK 393
           M    +  E  K
Sbjct: 532 MDCVFKAGEVEK 543



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 10/371 (2%)

Query: 33  GHTIVAL-NLFEEMIN-GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
            H + AL  + EEM + G G     C         ++  L +   ++ A  ++  M+   
Sbjct: 119 SHDLAALEKVLEEMSHLGYGLPNPAC-------AALVATLVRSRRLEDAFRVIGAMRHLK 171

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             P    Y  +I     A     A  L  +M D G + +V  F+ ++  L + G+ME A 
Sbjct: 172 FRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPAL 231

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            L++ +    + P+  +YN  +D F   G V+ A + F  +++ G + +  SY+ ++   
Sbjct: 232 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVL 291

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +  A  L+ +M ++   P    YNT+ +G     + + A+KL + ++  G     
Sbjct: 292 CKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSV 351

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            ++ + +  L K   + EAL LF  ++    + +I +Y+ +ID LC +GR+  A+++   
Sbjct: 352 VSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDE 410

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L  ++++ NIM+  LC   ++++AH +F     +G  P+ V + +L+ G  +  +
Sbjct: 411 MELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470

Query: 391 TSKVVELLHRM 401
                 L  +M
Sbjct: 471 IDDAYRLFEKM 481



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L+    +++ +E A  +   M     +P    Y  L   L E  Q ERA +L  +MQ 
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G       + T +  L + G +  AL L   ++    E DI  Y+  ID   K+G + +
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           AW+ FH L    L  D V+Y  M+  LC  G++ +A +LF  MEA+   P   A+NT+++
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324

Query: 384 GCIRNNETSKVVELLHRMDER 404
           G           +LL R+ ER
Sbjct: 325 GYGSAERFDDAYKLLERLRER 345



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K   C PN  TYS LINGLCR      A   ++EM     + G++  P+ V
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM----QKQGLI--PNVV 771

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GL K G +  A  L  + K     PD  ++N++I G   AN   EA ++F E 
Sbjct: 772 TYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEET 831

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
             +G + NV T   ++D L K   +E+A+ +  ++ +I    +A+
Sbjct: 832 RLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEIAKSQHAY 876



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 4/158 (2%)

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L S   S+ + P    YN +    F  H +    K+ +EM   G      A    +  L 
Sbjct: 97  LASASSSQPLPPD--AYNAVLP--FLSHDLAALEKVLEEMSHLGYGLPNPACAALVATLV 152

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           ++  + +A  +   +R LK      +Y+ LI  L ++ + + A EL   +        V 
Sbjct: 153 RSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVP 212

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            +  ++ AL  +G+M+ A  L  +++   + PD V +N
Sbjct: 213 LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYN 250


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 209/401 (52%), Gaps = 11/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P+V T++ +I GLCR         L + M+           P+ +
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG------FTPNDI 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR-LFIE 120
            Y  +++GLC+ G VD+A+ LL    +K   P+ V +  +I G+  +   +EA   L+ +
Sbjct: 315 TYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDK 370

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +P+V TF+ ++  LCK G M  A  ++  M   G  PN   Y TL+DGFC   +
Sbjct: 371 MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +   M + G + N+  Y++L+   CKN ++  AL +  EM  KG KP + T+NT
Sbjct: 431 LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ + E A  L+ +M   GV A+T  Y T I    + G I EAL+L   +    
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +Y+ LI   CK G  + A  LF  + R  L+   ++ N++I+ LC  GK+  A 
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +L  DM  +G+APD V +N+L+ G  +     +   L +++
Sbjct: 611 ELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 211/404 (52%), Gaps = 13/404 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   GC PN + Y TLI+ L +      AL L EEM      F + C PD   
Sbjct: 227 ACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM------FLMGCLPDVDT 280

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I GLC+   + +  +L+ +M  +   P+ +TY  ++ G C     +EA+ L    +
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL----L 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++   PN V F+++++   K+G+++EA+  L + MI+ G RP+ F +NTL+ G C  G +
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M + GC  N+ +Y+ L++G+CK  ++E A  + +EM +KG +  ++ YN L
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V +A  +  EM   G   D + + T I GLCK     +AL L+R + +   
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +  +Y+ LI    + G ++ A +L +  L RG  + D +TYN +I A C  G  +KA 
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPL-DEITYNGLIKAFCKLGATEKAL 575

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF +M  K + P  ++ N L+ G  R  +    +ELL  M  R
Sbjct: 576 GLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHR 619



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 207/401 (51%), Gaps = 14/401 (3%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A L+ K+   GC P+V T++TLI+GLC+ G    A+++  +M + NG     C P+ + Y
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM-SANG-----CTPNLITY 418

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           TT++DG CK+  +++A  +L +M  K    +++ YN ++R  C      +A  +  EM D
Sbjct: 419 TTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSD 478

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G +P++ TF+ ++  LCK  + E+A  L   M+  GV  N   YNTL+  F   G +  
Sbjct: 479 KGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQE 538

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A +L   M   GC  +  +Y+ LI  +CK    E AL L+ EM+ K + P+ ++ N L  
Sbjct: 539 ALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLIN 598

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL  + +V  A +L  +M   G+A D   Y + I+GLCK G I EA  LF  L+    + 
Sbjct: 599 GLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQP 658

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+ LI   C++G    A+ L         I + VT+ I++     +  + K + + 
Sbjct: 659 DAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE--IGKENGIS 716

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNN-----ETSKVVELLH 399
               AK +   C+    + LG + +N      ++  +++LH
Sbjct: 717 FG-TAKVIPSICIQVQNIFLGAVLHNMELSYPSTPYLKILH 756



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 169/357 (47%), Gaps = 33/357 (9%)

Query: 78  KAKELLLQMKDKNI-NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +A  +LL MK      P   +YN V+     AN  + A  +F EM+ +GV P V TF V+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M  LC   +++ A  LL  M + G  PN+ VY TL+       RVN A +L   M  MGC
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA-- 254
             +V +++ +I G C+   I     L   ML +G  P  +TY  L  GL  + +V+ A  
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 255 ------------FK------------------LFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                       F                   L+D+M ++G   D + + T I GLCK G
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            +  A+++   +    C  ++ +Y+ L+DG CK  +L+ A  + + +       +++ YN
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +++ ALC +GK+ KA D+  +M  KG  PD   FNTL+ G  + +     + L   M
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 42/277 (15%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAKELFV 189
           + V++D+L   G  +E   + +L++QI     AF  +  +      GR N   +A  + +
Sbjct: 105 YHVLIDKL---GAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLL 161

Query: 190 SMESMGCKHNVF-SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
            M+ + C    F SY+++++          A +++ EMLSKG+ PTV T+  +   L  +
Sbjct: 162 DMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMV 221

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
           ++V+ A  L  +M +HG   ++  Y+T I  L K   + EAL+L   + ++ C       
Sbjct: 222 NEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC------- 274

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
                                       + DV T+N +I+ LC   ++ +   L   M  
Sbjct: 275 ----------------------------LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLF 306

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +G  P+ + +  LM G  R  +  +   LL+++   N
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN 343


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 209/401 (52%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++  G E N++ Y  +++  C  G T  A  + E +            P+ V
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG------LSPNVV 289

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT ++ G CK+G +++A+ ++ +MK+  +I  D V Y  +I G+C     ++A R+  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G+  N+  ++ +++ LCK G+MEE  ++L+ M  +G+RP+ + YNTL+DG+C  G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A E+   M   G      +Y+ L+ G+C    I+ AL L+  ML +G+ P  ++ +T
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF+  + E+A  L+ E    G+A +   + T I+GLCK G + EA EL   ++ L+
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y  L DG CK G+L  A  L + +        V  +N  I       +  K +
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+  +M A+G++P+ V +  L+ G  +     +   L   M
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 210/403 (52%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA ++ +++  G  P+  T + +    CR G    A+   EEM       G+  + + V 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM------EGMGLEVNLVA 255

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++D  C  G+ + A+ +L  ++ K ++P+VVTY  +++G+C      EA+R+  EM 
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + G +  + V + ++++  C+ G+M++A+++   M   G+  N FVYNT+++G C  GR+
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRM 375

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              +++   ME +G + + +SY+ LI+GYC+   +  A  +   M+  G+  T +TYNTL
Sbjct: 376 EEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +H ++ A +L+  M + GVA +  +  T +DGL K G   +AL L++       
Sbjct: 436 LKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +++ +I+GLCK GR+  A EL   +       D +TY  +    C  G++  A  
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G AP    FN+ + G     +  KV ++   M  R
Sbjct: 556 LMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 229/498 (45%), Gaps = 102/498 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++  G   N+  Y+T+INGLC+ G       + +EM +      V  +PD  
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRPDKY 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG C+EG + KA E+   M    +    +TYN++++GFC  +  ++A RL+  M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
           + +GV PN                                   V+TF+ +++ LCK G+M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG----------- 195
            EA +LL+ M ++   P++  Y TL DG+C  G++  A  L   ME +G           
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 196 ------------------------CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
                                      N+ +Y  LI G+CK   +  A +LY EM++ G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 232 KPTVVTYNTLFIGLFEIHQVERA----FKLFD------------EMQRHGVAADTWA--- 272
            P V   + L    ++  +V+ A     KL +            E+ +     DT A   
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 273 -------YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                  +   I GLCK+G I +A  LF +LR  +   D  +YS LI G   SG +  A+
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   +    L  +++TYN +I+ LC  GK+ +A +LF  +++KG++P+ + +NTL+   
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 386 IRNNETSKVVELLHRMDE 403
            +  +T++  +L  +M E
Sbjct: 816 CKEGKTTEAFKLKQKMVE 833



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 208/433 (48%), Gaps = 67/433 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ +  A G   NVIT++T+INGLC+ G    A  L + M        + C PD++
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSL 535

Query: 62  IYTTIIDGLCKEGFVDKAKELL-----------------------------------LQM 86
            Y T+ DG CK G +  A  L+                                    +M
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             + ++P++VTY ++I G+C   + +EA  L+ EM++ G+ PNV   S +M    K GK+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 147 EEASQLLELMIQIGVRPNAFV--------------------------YNTLMDGFCLTGR 180
           +EA+ +L+ ++ I + P   +                          +N ++ G C +GR
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  AK LF S+ +     + F+YS LI+G   +  I+ A SL   MLS G+ P ++TYN+
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++ RA  LF+++Q  G++ +   Y T ID  CK G   EA +L + +    
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +  + +YS LI GLC  G ++ A +L   +    +  + +TY  +IH     G M++  
Sbjct: 836 IQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 895

Query: 361 DLFLDMEAKGVAP 373
            L+ +M  +G+ P
Sbjct: 896 KLYDEMHIRGLLP 908



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 193/388 (49%), Gaps = 9/388 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           + +++  L+      G    ALN+F+    G G+ G  C+P       +++ L + G   
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFD----GMGKVG--CRPSLRSCNRLLNKLVQSGDPG 200

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  +  QM+   + PD  T   + + +C      +A     EM   G++ N+V +  +M
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-C 196
           D  C  G  E+A ++LE + + G+ PN   Y  L+ G+C  GR+  A+ +   M+  G  
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +  +Y ++INGYC+   ++ A  + +EM   GI   +  YNT+  GL ++ ++E   K
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM+  G+  D ++Y T IDG C+ G + +A E+ R +          +Y+ L+ G C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 317 KSGRLKIAWEL-FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
               +  A  L F  L RGV   + ++ + ++  L   GK ++A +L+ +  A+G+A + 
Sbjct: 441 SLHAIDDALRLWFLMLKRGV-APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNV 499

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + FNT++ G  +    ++  ELL RM E
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKE 527



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 112/211 (53%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V++  II GLCK G +  AK L   +++K   PD  TY+S+I G   +   +EA  L   
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ PN++T++ ++  LCK+GK+  A  L   +   G+ PN   YNTL+D +C  G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +L   M   G +  V +YSILI G C    +E A+ L  +M+   + P  +TY T
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           L  G  +   +E   KL+DEM   G+    W
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 6/215 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + ++ +I GLC++G    A +LFE + N          PD   Y+++I G    G +D+A
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKR------FLPDNFTYSSLIHGCAASGSIDEA 754

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             L   M    + P+++TYNS+I G C +   + A  LF ++  +G+ PN +T++ ++DE
Sbjct: 755 FSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDE 814

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK GK  EA +L + M++ G++P    Y+ L+ G C  G +  A +L   M       N
Sbjct: 815 YCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPN 874

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
             +Y  LI+GY K+  +E    LY EM  +G+ PT
Sbjct: 875 YITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 6/168 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   + + G  PN+ITY++LI GLC++G    A+NLF ++ +          P+ +
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG------ISPNGI 806

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID  CKEG   +A +L  +M ++ I P V+TY+ +I G C      EA +L  +M
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           ++  V PN +T+  ++    K+G MEE S+L + M   G+ P  ++ N
Sbjct: 867 IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 211/390 (54%), Gaps = 14/390 (3%)

Query: 2   EAAALFTKLKAFG--CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EAA L   +   G  C P+V++YST+I+G  + G    A  LF +M+    + G+   P+
Sbjct: 102 EAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKML----DHGI--PPN 155

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V   ++IDGLCK   +DKA+ +L QM D++I P+  TYNS+I G+  +    EA R+  
Sbjct: 156 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 215

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G +PNVVT+++++D LCK+G   EA ++   MIQ G +P+A  Y +L+ G+   G
Sbjct: 216 EMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEG 275

Query: 180 ---RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
               +N  K+L V     G + N  ++SI I  YCK   ++ A   + +M   G  P +V
Sbjct: 276 NLVEMNNVKDLMV---QNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIV 332

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY T+  GL +I +++ A   F +M   G++ +   + T I G    G   +A ELF  +
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 392

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  ++ +ID L K G++  A +LF  +PR     +VV+YN MIH     G++
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 452

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            +   L  DM   G+ P  V FNTL+ G +
Sbjct: 453 GEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 204/396 (51%), Gaps = 4/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   GC P+V +YSTL+ GLC       A     E+I+   E G  C PD V Y+T
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEA----AELIHMMAEDGDNCPPDVVSYST 126

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  KEG V KA  L  +M D  I P+VVT NSVI G C     ++A+ +  +M+D+ 
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++     +G+  EA ++L+ M + G RPN   YN L+D  C +G    A+
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F SM   G K +  +Y  L++GY     +    ++   M+  G++    T++      
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +++ A   F +MQ+ G   D   Y T IDGLCK G + +A+  F  +       +I
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ LI G    G+ + A ELF+ +    +  DV  +  MI  L  +GK+ +A  LF  
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M   G  P+ V++NT++ G     E  +V++LL  M
Sbjct: 427 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 462



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 207/402 (51%), Gaps = 11/402 (2%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           AAL   +K  G   + + ++ L+  LC    T  A+N+   ++    E G  C PD   Y
Sbjct: 34  AALGQIIKT-GLRADAVAFTPLLRTLCAKKRTSDAMNI---VLRRMPELG--CTPDVFSY 87

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +T++ GLC E   ++A EL+  M +   N  PDVV+Y++VI GF    D  +A  LF +M
Sbjct: 88  STLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKM 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ PNVVT + ++D LCK   M++A  +L+ MI   + PN   YN+L+ G+  +G+ 
Sbjct: 148 LDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQW 207

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   G + NV +Y++LI+  CK+     A  +++ M+  G KP   TY +L
Sbjct: 208 TEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSL 267

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     + D M ++G+ ++   +   I   CK G + EA   F  ++ L  
Sbjct: 268 LHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGF 327

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ +IDGLCK GRL  A   F  +    L  +++T+  +IH     GK +KA +
Sbjct: 328 MPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEE 387

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN---NETSKVVELLHR 400
           LF +M  +G+ PD   F  ++    +     E  K+ +L+ R
Sbjct: 388 LFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR 429



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 173/385 (44%), Gaps = 38/385 (9%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   +  +I   C  G ++     L Q+    +  D V +  ++R  C    +++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDG 174
            +  M + G  P+V ++S ++  LC   K EEA++L+ +M + G    P+   Y+T++ G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   G V +A  LF  M   G   NV + + +I+G CK + ++ A ++  +M+ + I P 
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TYN+L  G     Q   A ++  EM R G   +   Y   ID LCK+G+  EA E+F 
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 295 TLRILKCELDIRSYSCLIDGL-----------------------------------CKSG 319
           ++     + D  +Y  L+ G                                    CK G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           RL  A   F  + +   + D+VTY  +I  LC  G++D A   F  M   G++P+ + F 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G     +  K  EL + M +R
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDR 395



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 3/262 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P++ TF +++   C  G +      L  +I+ G+R +A  +  L+   C   R + A 
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPTVVTYNTLF 242
            + +  M  +GC  +VFSYS L+ G C  K+ E A  L   M   G    P VV+Y+T+ 
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+   V +A+ LF +M  HG+  +     + IDGLCK   + +A  + + +      
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ LI G   SG+   A  +   + R     +VVTYN++I  LC  G   +A ++
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F  M   G  PD   + +L+ G
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHG 270



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 85/288 (29%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG----------E 51
           EA  +F  +   G +P+  TY +L++G    G+ +V +N  ++++  NG          E
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGN-LVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 52  FGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
               CK                    PD V YTT+IDGLCK G +D A     QM D  +
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P+++T+ ++I GF       +A+ LF EMMD+G+ P+V  F+ ++D L K GK+ EA +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 152 LLELMIQ-----------------------------------IGVRPNAFVYNTLMDGF- 175
           L +LM +                                   IG++P A  +NTL+DG  
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482

Query: 176 ------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                             C  GR+     LF  M     K +  + +I
Sbjct: 483 SMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 211/425 (49%), Gaps = 30/425 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  LF ++ + G +  V+TY+ +   LC+ G    A  + +EM+               
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 47  ----NGNGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                G G   VV            KP+  + T  I  LCK G  ++A E+   +  K +
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             ++ T N++I G C  N+  EA ++   M+D GV+ + +T+++++   CK  KMEEA Q
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L + MI+ G +P+ F +NT +  +C  G+V     L   M+S G K ++ +Y  +I+GYC
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K K++  A     E++  G++P  V YN L  G      +  A  + D M+ +G+     
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + +  +C  G + EA E+F    +   EL +  Y+ +I G CK G++  A   F  +
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +  + +TY  +++A C  G  ++A  LF +M + G+ PD V++NTL+ GC   +  
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSL 758

Query: 392 SKVVE 396
            K+VE
Sbjct: 759 DKIVE 763



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 182/376 (48%), Gaps = 42/376 (11%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ L   G +D A+++  +M+D N + PDV TY  +I+  C A + + A  +  E+   
Sbjct: 186 LVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERS 245

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+QP VVT++V+MD LC++G++EEA QL   M++  +RP+   +  L++G     R    
Sbjct: 246 GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +   ME  G   N   Y+ LI  +C+      AL L+ EM+SKGIK TVVTYN +   
Sbjct: 306 DAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKA 365

Query: 245 LFEIHQVERAFKLFDEMQRHGVAAD--------TWAYR---------------------- 274
           L +  ++E A ++ DEM   G+            W  R                      
Sbjct: 366 LCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKP 425

Query: 275 ------TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
                   I  LCK G   EA E++  +      ++I + + LI GLC+   +K A ++ 
Sbjct: 426 NDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVL 485

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIR 387
            ++    +  D +TYNIMI   C   KM++A  L  DM  +G  PD   FNT +   C  
Sbjct: 486 KAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC-- 543

Query: 388 NNETSKVVELLHRMDE 403
                KV ++LH +D+
Sbjct: 544 --NLGKVEDILHLLDQ 557



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 193/400 (48%), Gaps = 7/400 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +L+  G +P V+TY+ L++ LCR+G    A  L   M+ G        +P  V 
Sbjct: 235 AFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR------LRPSIVT 288

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I+GL +     +   +L +M+   I P+ V YN +I   C     +EA RLF EM+
Sbjct: 289 FGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMV 348

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-TGRV 181
            +G++  VVT+++I   LCK G+ME A Q+L+ M+  G+  +  ++N+++      TGR+
Sbjct: 349 SKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRL 408

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    L   M +   K N    +  I   CK  + E A  ++  +L KG+   + T N L
Sbjct: 409 DVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNAL 468

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + + ++ A K+   M   GV  D   Y   I   CK   + EA++L   +     
Sbjct: 469 IHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGF 528

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +++  +   C  G+++    L   +    L  D+VTY  +I   C    + KA+ 
Sbjct: 529 KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +++   G+ P+ V +N L+ G  RN   S  + +L  M
Sbjct: 589 YLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 6/261 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G +P++ T++T +   C  G     L+L ++M +         KPD V
Sbjct: 515 EAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG------LKPDIV 568

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIIDG CK   V KA + L+++    + P+ V YN++I G+      ++A  +   M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+QP  +T++ +M  +C  G +EEA ++    I   +      Y  ++ GFC  G++
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F  M     + N  +Y+ L+  YCK    E A  L+ EM+S GI P  V+YNTL
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748

Query: 242 FIGLFEIHQVERAFKLFDEMQ 262
             G  E+  +++  +   EM 
Sbjct: 749 ISGCCEVDSLDKIVESPAEMS 769



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 6/223 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K+ G +P+++TY T+I+G C+      A     E+I  NG      +P+AVIY  
Sbjct: 554 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK-NG-----LRPNAVIYNA 607

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G  + G +  A  +L  MK   I P  +TYNS++   C+A    EAK +F + + + 
Sbjct: 608 LIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKN 667

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++  V+ +++I+   CK GK++EA    + M    +RPN   Y TLM  +C  G    A 
Sbjct: 668 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAF 727

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +LF  M S G   +  SY+ LI+G C+   ++  +   +EM S
Sbjct: 728 KLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 197/389 (50%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP+  TY+TLI GLC  G T  AL + ++M+         C PD V YT +++  CK   
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG------CVPDVVTYTILLEATCKRSG 206

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A +LL +M+ K   PD++TYN V+ G C     ++A      +   G +PN V++++
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   + E+A +L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N  SY+ +++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +V+ A 
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +++  G      +Y T IDGL K G   EALEL   +     + DI +YS +  GL
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+  R++ A   F  +    +  + V YN ++  LC   +   A DLF+ M + G  P+ 
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  L+ G        +  ELL  +  R
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSR 535



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 193/358 (53%), Gaps = 6/358 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+V+TY+ L+   C+      A+ L +EM    G     C PD + Y  +++G+C+E
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RAKG-----CAPDIITYNVVVNGICQE 239

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD A E L  +      P+ V+YN V++G C A    +A++L  EM  +G  PNVVTF
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++  LC+ G +E A ++L+ + + G  PN+  YN ++  FC   +++RA      M S
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 359

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  ++ SY+ L+   C+  E++ A+ L  ++  KG  P +++YNT+  GL +  + + 
Sbjct: 360 RGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKE 419

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L +EM   G+  D   Y T   GLC+   I EA+  F  ++ +    +   Y+ ++ 
Sbjct: 420 ALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILL 479

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           GLCK      A +LF  +     + +  TY I+I  L  +G + +A +L  ++ ++GV
Sbjct: 480 GLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 206/405 (50%), Gaps = 20/405 (4%)

Query: 4   AALFTKLKAFG-----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF 52
           AAL  KL A G           CEP+V+ Y+ ++ G C TG    A  L  +M       
Sbjct: 98  AALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM------- 150

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
               +PD+  Y T+I GLC  G    A  +L  M  +   PDVVTY  ++   C  +   
Sbjct: 151 --PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYK 208

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A +L  EM  +G  P+++T++V+++ +C+ G++++A + L+ +   G  PN   YN ++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   R   A++L   M   G   NV ++++LI+  C+   +E A+ +  ++   G  
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT 328

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN +     +  +++RA    + M   G   D  +Y T +  LC+ G +  A+EL
Sbjct: 329 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL 388

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L+   C   + SY+ +IDGL K+G+ K A EL + +    L  D++TY+ +   LC 
Sbjct: 389 LHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           + ++++A   F  ++  G+ P+ V +N ++LG  +  ET   ++L
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 192/385 (49%), Gaps = 16/385 (4%)

Query: 14  GCEPNVIT--YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           G EP+      + LI  LC +G T  A  +              C+PD + Y  ++ G C
Sbjct: 87  GLEPSAAPGPCAALIKKLCASGRTAEARRVL-----------AACEPDVMAYNAMVAGYC 135

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
             G +D A+ L+  M    + PD  TYN++IRG C    +  A  +  +M+ +G  P+VV
Sbjct: 136 VTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVV 192

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++++++  CK    ++A +LL+ M   G  P+   YN +++G C  GRV+ A E   S+
Sbjct: 193 TYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSL 252

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            S GC+ N  SY+I++ G C  +  E A  L +EM  KG  P VVT+N L   L     V
Sbjct: 253 PSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLV 312

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A ++ D++ ++G   ++ +Y   +   CK   +  A+     +    C  DI SY+ L
Sbjct: 313 EPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTL 372

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +  LC+ G +  A EL H L        +++YN +I  L   GK  +A +L  +M  KG+
Sbjct: 373 LTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGL 432

Query: 372 APDCVAFNTLMLGCIRNNETSKVVE 396
            PD + ++T+  G  R +   + + 
Sbjct: 433 QPDIITYSTISSGLCREDRIEEAIR 457



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 181/336 (53%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++A GC P++ITY+ ++NG+C+ G    A+   + + +        C+P+ V
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG------CEPNTV 262

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A++L+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ I+   CK  KM+ A   +ELM+  G  P+   YNTL+   C  G V
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM++KG++P ++TY+T+
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+  +T  Y   + GLCK      A++LF  +    C
Sbjct: 443 SSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGC 502

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y+ LI+GL   G +K A EL   L  RGV+
Sbjct: 503 MPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 142/267 (53%), Gaps = 6/267 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  PNV+T++ LI+ LCR G    A+ + +++     ++G  C P+++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI----PKYG--CTPNSL 332

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+   CK+  +D+A   +  M  +   PD+V+YN+++   C   + + A  L  ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P +++++ ++D L K GK +EA +LL  M+  G++P+   Y+T+  G C   R+
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A   F  ++ MG + N   Y+ ++ G CK +E   A+ L+  M+S G  P   TY  L
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA 268
             GL     V+ A +L  E+   GV +
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGVVS 539



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           + GL + G + EAL L  ++  L+        + LI  LC SGR   A        R VL
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEA--------RRVL 117

Query: 337 IA---DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
            A   DV+ YN M+   C  G++D A  L  DM    + PD   +NTL+ G      T  
Sbjct: 118 AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGN 174

Query: 394 VVELLHRMDER 404
            + +L  M  R
Sbjct: 175 ALVVLDDMLRR 185


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 191/341 (56%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I   C+EG +++A E++  M DK + P + TYN++I G C       AK + IE
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G+ P+  T++ ++ E C+     EA ++   M++ GV P+   +++LM  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A   F  M+  G   +   Y++L++GYC+N  +  AL +  EML +G    V+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +   +  A KLFDEM   G   D + + T I G C++G + +AL LF T+    
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + DI +Y+ LIDG CK G ++ A EL+  +    +  + +TY I+I+A C+ G + +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L+  M  KG+ P  V  NT++ G  R+ ++SK  E L RM
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 342



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 196/364 (53%), Gaps = 6/364 (1%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
           ++TY+TLI   CR G    A     E++N   + G+  KP    Y  II+GLCK+G   +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAF----EIMNSMADKGL--KPSLFTYNAIINGLCKKGRYAR 54

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           AK +L++M +  ++PD  TYN+++   C  ++ +EAK +F EM+ QGV P++V+FS +M 
Sbjct: 55  AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
              +N  +++A      M + G+ P+  +Y  LM G+C  G +  A ++   M   GC  
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V +Y+ ++NG CK K +  A  L+ EM+ +G  P   T+ TL  G  +   + +A  LF
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M +  +  D  AY T IDG CK G + +A EL+  +   K   +  +Y  LI+  C  
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G +  A+ L+  +    +   +VT N +I   C  G   KA +    M AKGVAPD +++
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354

Query: 379 NTLM 382
           NTL+
Sbjct: 355 NTLI 358



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 151/277 (54%), Gaps = 6/277 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++   G  P+++++S+L+    R  H   AL  F +M     +FG+V  PD V
Sbjct: 89  EAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM----KKFGLV--PDNV 142

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT ++ G C+ G + +A ++  +M ++    DV+ YN+++ G C      +A +LF EM
Sbjct: 143 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 202

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+  TF+ ++   C++G M +A  L   M Q  ++P+   YNTL+DGFC  G +
Sbjct: 203 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 262

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL+  M S     N  +Y ILIN YC    +  A  L+  M+ KGIKPT+VT NT+
Sbjct: 263 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 322

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G        +A +    M   GVA D  +Y T I+
Sbjct: 323 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 149/275 (54%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +VT++ ++   C+ G +EEA +++  M   G++P+ F YN +++G C  GR  RAK + +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M ++G   +  +Y+ L+   C+      A  ++ EML +G+ P +V++++L        
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
            +++A   F +M++ G+  D   Y   + G C+NG ++EAL++   +    C LD+ +Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +++GLCK   L  A +LF  +     + D  T+  +IH  C DG M KA  LF  M  +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + PD VA+NTL+ G  +  E  K  EL   M  R
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 275



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 120/208 (57%), Gaps = 6/208 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   GC  +VI Y+T++NGLC+      A  LF+EM+    E G +  PD 
Sbjct: 158 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV----ERGAL--PDF 211

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +TT+I G C++G + KA  L   M  +NI PD+V YN++I GFC   +  +A  L+  
Sbjct: 212 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 271

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + PN +T+ ++++  C  G + EA +L ++MI+ G++P     NT++ G+C +G 
Sbjct: 272 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 331

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILIN 208
            ++A E    M + G   +  SY+ LIN
Sbjct: 332 SSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 41/173 (23%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+  T++TLI+G C+ G+   AL+LF  M   N       KPD V
Sbjct: 194 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN------IKPDIV 247

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY----------------------- 98
            Y T+IDG CK G ++KA EL   M  + I P+ +TY                       
Sbjct: 248 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 307

Query: 99  ------------NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
                       N+VI+G+C + DS++A      M+ +GV P+ ++++ ++++
Sbjct: 308 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 201/391 (51%), Gaps = 11/391 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV++Y+ +I+G C+  +   AL    EM     E G    P A  Y++I+   CK G
Sbjct: 94  CAPNVVSYNIIIDGYCKARNIEKALAFLREM----EELGHPPTPHA--YSSIVQSFCKTG 147

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V KA ++  +M  K   PD+V +N ++ G   A   +EA+ LF  M  +G +P+VVT++
Sbjct: 148 NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYN 207

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LCK  K++EA  LLE M Q  V P    Y TL+D  C   R+ +A E+F  M   
Sbjct: 208 TMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEG 267

Query: 195 GCKHNVFSYS--ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            C     +YS  ILING CK +    A  ++ EM  +GI PTVVTYNTL  GL    +++
Sbjct: 268 PCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQ 327

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L   M     A + + Y   I  LCK   + EA +L   +R       ++ +  L+
Sbjct: 328 DAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLL 387

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             L ++GRL  A+EL+  + R      V + NI++  +   G +D+A D    M   G+ 
Sbjct: 388 SRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIV 447

Query: 373 PDCVAFNTLMLGCI---RNNETSKVVELLHR 400
           PD   ++ L++G     + ++  K+VE L R
Sbjct: 448 PDKFTYDKLVVGLCWQGKADQARKLVEELVR 478



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 205/406 (50%), Gaps = 9/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  ++K  G  P+V ++  LI G  ++G      +  + M+   G F     P+A+
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA-GLF-----PNAI 65

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +I  LCK G + +A+  L +M  ++  P+VV+YN +I G+C A +  +A     EM
Sbjct: 66  LYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P    +S I+   CK G + +A  +   M   G  P+   +N L+ G     ++
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ELF SM S GCK +V +Y+ +I G CK K+++ A+ L   M  + + PT VTY TL
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI--DGLCKNGYIVEALELFRTLRIL 299
              L +  ++++A+++F++M          AY   I  +GLCK     EA E+F+ +R  
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGR 304

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                + +Y+ L++GL  + +L+ A EL + +   V   ++ TY I+I +LC   ++++A
Sbjct: 305 GISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEA 364

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             L   M  KG  P    +  L+    R        EL   M   N
Sbjct: 365 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRIN 410



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 170/337 (50%), Gaps = 3/337 (0%)

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I  L +   V +A+ ++ +MK    +PDV ++  +IRGF  +            M++ G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            PN + ++ ++  LCK G + EA   L+ M Q    PN   YN ++DG+C    + +A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
               ME +G      +YS ++  +CK   +  A+ +++EM +KG +P +V +N L  GL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              ++  A +LF  M   G   D   Y T I GLCK   + EA+ L   ++         
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN--IMIHALCADGKMDKAHDLFL 364
           +Y+ LID LCK  RL+ A+E+F  +  G        Y+  I+I+ LC   +  +A ++F 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +M  +G++P  V +NTL+ G +   +    +EL + M
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 4/264 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K     P  +TY+TLI+ LC+      A  +FE+M  G       C   A 
Sbjct: 221 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGP----CPCTEPAY 276

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I+GLCK     +AKE+  +M+ + I+P VVTYN+++ G        +A  L   M
Sbjct: 277 SVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQ   PN+ T+ +++  LCK  ++EEA +LL  M   G  P+  ++  L+      GR+
Sbjct: 337 LDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 396

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL+  M  + C+  V S +IL++G  +   ++ A     +M   GI P   TY+ L
Sbjct: 397 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 456

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
            +GL    + ++A KL +E+ R G
Sbjct: 457 VVGLCWQGKADQARKLVEELVRDG 480



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +A+ +   M+  G   +V S+ +LI G+ K+   +   S    ML  G+ P  + YN 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +   +  A      M +H  A +  +Y   IDG CK   I +AL   R +  L 
Sbjct: 70  LISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                 +YS ++   CK+G +  A ++F  +P      D+V +N+++  L    K+ +A 
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +LF  M ++G  PD V +NT++ G  +  +  + V LL RM + +
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V+TY+T+++  C+ G    AL L  +M        + C P+ V Y  +++GL   
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ------AMGCSPNDVTYNVLVNGLSHS 250

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++AKEL+  M    +   V TY+ +IRG+C      EA RL  EM+ +G  P VVT+
Sbjct: 251 GEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTY 310

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + IM  LCK G++ +A +LL++M+   + P+   YNTL+ G+   G +  A  LF  +  
Sbjct: 311 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                +V +Y+ LI+G C+  +++ A+ L  EM+  G  P V T+ T   G  ++  +  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +LFDEM   G+  D +AY T I G  K G   +A  +   +       D+ +Y+  ID
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K G LK A EL   +    L+ D VTY  +IHA    G + KA  LFL+M +KG+ P
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550

Query: 374 DCVAFNTLM 382
             V +  L+
Sbjct: 551 SVVTYTVLI 559



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 210/401 (52%), Gaps = 10/401 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---GNGEFGVVCKPDAVIYTT--IID 68
           G + + I+YS +++ L R G    A  + E++++    NG   VV   +  + +   I+D
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 69  GL----CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC-YANDSNEAKRLFIEMMD 123
            L     K+  ++K   +  +M  K + PDV   N V+R      N+ + A+ ++  M++
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G+ P VVT++ ++D  CK G ++EA QLL  M  +G  PN   YN L++G   +G + +
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AKEL   M  +G + +V++Y  LI GYC+  +IE A  L  EMLS+G  PTVVTYNT+  
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL +  +V  A KL D M    +  D  +Y T I G  + G I EA  LF  LR      
Sbjct: 316 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAP 375

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            + +Y+ LIDGLC+ G L +A  L   + +     DV T+   +   C  G +  A +LF
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +M  +G+ PD  A+ T ++G ++  + SK   +   M  R
Sbjct: 436 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 187/333 (56%), Gaps = 6/333 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L+     P+V+TY+TLI+GLCR G   VA+ L +EMI    +      PD  
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD------PDVF 413

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +TT + G CK G +  AKEL  +M ++ + PD   Y + I G     D ++A  +  EM
Sbjct: 414 TFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 473

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+++T++V +D L K G ++EAS+L++ M+  G+ P+   Y +++    + G +
Sbjct: 474 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 533

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+ LF+ M S G   +V +Y++LI+ Y     ++ A+  + EM  KG+ P V+TYN L
Sbjct: 534 RKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++ ++++A+  F EMQ  G++ + + Y   I+  C  G+  EAL L++ +   + 
Sbjct: 594 INGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 653

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + D  ++  L+  L K  +L +   L + +  G
Sbjct: 654 QPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAG 686



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 210/445 (47%), Gaps = 64/445 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  L  +++A GC PN +TY+ L+NGL  +G    A  L ++M               I
Sbjct: 220 EALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLI 279

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  E G +                P  V Y TI+ GLCK G V  A++LL  M +KN+ 
Sbjct: 280 RGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 339

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+V+YN++I G+    +  EA  LF E+  + + P+VVT++ ++D LC+ G ++ A +L
Sbjct: 340 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL 399

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI+ G  P+ F + T + GFC  G +  AKELF  M + G + + F+Y   I G  K
Sbjct: 400 KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 459

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A  +  EML++G  P ++TYN    GL ++  ++ A +L  +M  +G+  D   
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519

Query: 273 YRTFIDGLCKNGYIVEALELFR------------TLRILKCELDIR-------------- 306
           Y + I      G++ +A  LF             T  +L     +R              
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579

Query: 307 ---------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                    +Y+ LI+GLCK  ++  A+  F  +    +  +  TY I+I+  C  G   
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L+ DM  + + PD     +L+
Sbjct: 640 EALRLYKDMLDREIQPDSCTHRSLL 664



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 137/282 (48%), Gaps = 21/282 (7%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G + + +++SVI+D L +NG M  A  ++E ++ + +                 G ++  
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKME---------------NGVIDVV 120

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
               VSM S+          +L+  Y K   +E  L ++ +M+SKG+ P V   N +   
Sbjct: 121 SSSEVSMPSVK-----LILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRL 175

Query: 245 LFEI-HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L +  + ++ A ++++ M   G+      Y T +D  CK G + EAL+L   ++ + C  
Sbjct: 176 LRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSP 235

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  +Y+ L++GL  SG ++ A EL   + R  L   V TY+ +I   C  G++++A  L 
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +M ++G  P  V +NT+M G  +    S   +LL  M  +N
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 200/391 (51%), Gaps = 9/391 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN ++++ +I  LC+ G    A+ +F  M          C PD   Y T++DGLCKE  +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK------CLPDGYTYCTLMDGLCKEERI 238

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  LL +M+ +  +P  V YN +I G C   D +   +L   M  +G  PN VT++ +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC  GK+++A  LLE M+     PN   Y TL++G     R      L +SME  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + N   YS+LI+G  K  + E A++L+ +M  KG +P +V Y+ +  GL    +   A +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + + M   G   + + Y + + G  K G   EA++++R +    C  +   YS LIDGLC
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM---EAKGVAP 373
             GR+K A  ++  +    +  D V Y+ MI  LC  G MD A  L+ +M   E     P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V +N L+ G     + S+ V+LL+ M +R
Sbjct: 539 DVVTYNILLDGLCMQKDVSRAVDLLNCMLDR 569



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 197/385 (51%), Gaps = 13/385 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +    C P+  TY TL++GLC+      A+ L +EM +        C P  VI
Sbjct: 206 AIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPVI 259

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDGLCK+G + +  +L+  M  K   P+ VTYN++I G C     ++A  L   M+
Sbjct: 260 YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN VT+  +++ L K  +  + ++LL  M + G R N  +Y+ L+ G    G+  
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAE 379

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L+  M   GC+ N+  YS +I+G C+  +   A  + + M+S G  P V TY++L 
Sbjct: 380 EAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLM 439

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    E A +++ EM   G + + + Y   IDGLC  G + EA+ ++  +  +  +
Sbjct: 440 KGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-----PRGVLIADVVTYNIMIHALCADGKMD 357
            D  +YS +I GLC  G +  A +L+H +     P+     DVVTYNI++  LC    + 
Sbjct: 500 PDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDVS 557

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A DL   M  +G  PD +  NT +
Sbjct: 558 RAVDLLNCMLDRGCDPDVITCNTFL 582



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 188/370 (50%), Gaps = 30/370 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN +TY+TLI+GLC  G    A++L E M++        C P+ V Y T+I+GL K+
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQ 340

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
                   LL+ M+++    +   Y+ +I G      + EA  L+ +M ++G +PN+V +
Sbjct: 341 RRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVY 400

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++D LC+ GK  EA ++L  MI  G  PN + Y++LM GF  TG    A +++  M+ 
Sbjct: 401 SAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDE 460

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N F YS+LI+G C    ++ A+ ++S+ML+ GIKP  V Y+++  GL  I  ++ 
Sbjct: 461 TGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDA 520

Query: 254 AFKLFDEM---QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI----- 305
           A KL+ EM   +      D   Y   +DGLC    +  A++L   +    C+ D+     
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNT 580

Query: 306 -------RSYSC---------LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                  +S SC         L+  L K  R+  A ++   +    L     T+ +++  
Sbjct: 581 FLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPE 640

Query: 350 LCADGKMDKA 359
           +C   K++ A
Sbjct: 641 ICKPKKINAA 650



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 163/314 (51%), Gaps = 30/314 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+ A L   ++  G   N   YS LI+GL + G    A+ L+++M     E G  C+P+ 
Sbjct: 344 MDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKM----AEKG--CRPNI 397

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y+ +IDGLC+EG  ++AKE+L  M      P+V TY+S+++GF     S EA +++ E
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G   N   +SV++D LC  G+++EA  +   M+ IG++P+   Y++++ G C  G 
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517

Query: 181 VNRAKELFVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           ++ A +L+  M   E    + +V +Y+IL++G C  K++  A+ L + ML +G  P V+T
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577

Query: 238 YNT---------------------LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            NT                     L   L +  +V  A K+ + M    +A  T  +   
Sbjct: 578 CNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMI 637

Query: 277 IDGLCKNGYIVEAL 290
           +  +CK   I  A+
Sbjct: 638 VPEICKPKKINAAI 651



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 142/282 (50%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+  + PN ++F++++  LCK G ++ A ++   M +    P+ + Y TLMDG C   R+
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERI 238

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M+S GC  +   Y++LI+G CK  ++     L   M  KG  P  VTYNTL
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++++A  L + M       +   Y T I+GL K    ++   L  ++     
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L+   YS LI GL K G+ + A  L+  +       ++V Y+ +I  LC +GK ++A +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +   M + G  P+   +++LM G  +   + + +++   MDE
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDE 460



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----IKPTVVT 237
           +A +LF  M +   CK +V S++ ++N           L  Y  +++      I P  ++
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N +   L ++  V+RA ++F  M       D + Y T +DGLCK   I EA+ L   ++
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C      Y+ LIDGLCK G L    +L  ++       + VTYN +IH LC  GK+D
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLD 309

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           KA  L   M +    P+ V + TL+ G ++         LL  M+ER
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER 356



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 5/278 (1%)

Query: 132 TFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELF-- 188
           +F V+     K    E+A  L   M+ +   + +   +N++++     G  +R  E +  
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 189 --VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
              S  +M    N  S++++I   CK   ++ A+ ++  M  K   P   TY TL  GL 
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +  +++ A  L DEMQ  G +     Y   IDGLCK G +    +L   + +  C  +  
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI GLC  G+L  A  L   +     I + VTY  +I+ L    +      L + M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           E +G   +   ++ L+ G  +  +  + + L  +M E+
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEK 391


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 204/368 (55%), Gaps = 6/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ T+S LIN LC+      A    + M          C      Y ++++ LCK   V
Sbjct: 82  PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSC----FSYNSLLNSLCKAKKV 137

Query: 77  DKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            +A  +   M  ++++ PDVV+Y+ +I GFC  ++   A++L+ +M+D    PNV T++ 
Sbjct: 138 HQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 197

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++ L + G++ +A  + E MI  G  P+   Y+TL+ GF L  + ++A ELF +M S G
Sbjct: 198 FLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG 257

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ N  +Y+ L++G CK  + + A  L+ +M+ +G  P  VTY TL  G   + ++E+A 
Sbjct: 258 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAV 317

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++FDEM   G   D  AY   + G  + G   EA +LF+ +   +C+ D  S++ +IDGL
Sbjct: 318 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377

Query: 316 CKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            K+ RL  A E+F  + +      D+VTYN +I  LC + ++ +A  +F +++   ++PD
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437

Query: 375 CVAFNTLM 382
             AFN L+
Sbjct: 438 PHAFNVLL 445



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/335 (34%), Positives = 180/335 (53%), Gaps = 6/335 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           +Y++L+N LC+      A  +F  M++   E  VV  PD V Y+ +IDG CK   + +A+
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYSILIDGFCKIDELGRAE 177

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +L  QM D N  P+V TYN+ + G        +A+ ++ EM+  G  P+V+T+S ++   
Sbjct: 178 KLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
               K ++A +L E MI  G RPNA  YN L+ G C   + + A ELF  M   GC  + 
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDK 297

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L+ G+C   +IE A+ ++ EM+SKG  P VV YN L  G F   +   A +LF  
Sbjct: 298 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSG 319
           M       DT ++   IDGL K   + +A+E+F R  +   C  D+ +Y+ LI GLC   
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           RL  A ++F  + R  L  D   +N+++ A+ A G
Sbjct: 418 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 205/387 (52%), Gaps = 12/387 (3%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T  ++I  LC+ G    AL+L E MI         C PD   ++ +I+ LCK   + +A+
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRG-----YC-PDMATHSMLINELCKADKIQEAQ 104

Query: 81  ELLLQMKDKNIN---PDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVI 136
           E L  M ++ I+       +YNS++   C A   ++A  +F  M+ ++ V P+VV++S++
Sbjct: 105 EFLQGM-NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSIL 163

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK  ++  A +L + MI +   PN   YN  ++G    GR+  A+ ++  M S GC
Sbjct: 164 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGC 223

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +YS LI+G+   ++ + A  L+  M+S+G +P  VTYN L  GL +  + + A +
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 283

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF +M   G   D   Y T + G C  G I +A+E+F  +     + D+ +Y+CL+ G  
Sbjct: 284 LFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 343

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA-KGVAPDC 375
           ++G+   A +LF  +       D V++NIMI  L    ++D A ++F  ME   G +PD 
Sbjct: 344 RAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMD 402
           V +N+L+ G       S+ +++   +D
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEID 430



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 192/390 (49%), Gaps = 8/390 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N + ++  + GLC++G    A   FE              P +    ++I  LCK G VD
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQA---FEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVD 66

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ---PNVVTFS 134
            A  LL  M  +   PD+ T++ +I   C A+   EA+  F++ M++ +     +  +++
Sbjct: 67  SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQGMNRTISTRASSCFSYN 125

Query: 135 VIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +++ LCK  K+ +A  +   M+ +  V P+   Y+ L+DGFC    + RA++L+  M  
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           + C  NV +Y+  +NG  +   I  A  +Y EM+S G  P V+TY+TL  G     + ++
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +LF+ M   G   +   Y   + GLCK     EA ELFR +    C+ D  +Y+ L+ 
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G+++ A E+F  +       DVV YN ++      GK  +A  LF  M ++   P
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D V+ N ++ G  +       VE+  RM++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 183/350 (52%), Gaps = 6/350 (1%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV---TYNSVIRGFCYANDSNEAKRL 117
           V +T  + GLCK G +++A E    M++   +       T +SVI+  C A   + A  L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNA-FVYNTLMDGF 175
              M+ +G  P++ T S++++ELCK  K++EA + L+ M + I  R ++ F YN+L++  
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131

Query: 176 CLTGRVNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           C   +V++A  +F +M S      +V SYSILI+G+CK  E+  A  LY +M+     P 
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V TYN    GL    ++  A  +++EM   G + D   Y T I G        +A ELF 
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFE 251

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +    C  +  +Y+CL+ GLCK  +   A ELF  +       D VTY  +++  C  G
Sbjct: 252 AMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVG 311

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           K+++A ++F +M +KG  PD VA+N L+ G  R  +  +  +L   M  R
Sbjct: 312 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 153/284 (53%), Gaps = 7/284 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++    C PNV TY+  +NGL R G    A  ++EEMI+        C PD + 
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG------CSPDVIT 229

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+I G       D+A EL   M  +   P+ VTYN ++ G C  +  +EA  LF +M+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  P+ VT++ ++   C  GK+E+A ++ + M+  G  P+   YN L+ GF   G+  
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTL 241
            A++LF  M S  CK +  S++I+I+G  K K ++ A+ ++  M    G  P +VTYN+L
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
             GL    ++  A K+F E+ R  ++ D  A+   ++ +   G+
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 135/246 (54%), Gaps = 7/246 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ + GC P+VITYSTLI+G         A  LFE MI+        C+P+AV
Sbjct: 210 DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG------CRPNAV 263

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLCKE   D+A EL  +M ++  +PD VTY +++ GFC      +A  +F EM
Sbjct: 264 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM 323

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VV ++ ++    + GK  EA QL ++M+    +P+   +N ++DG     R+
Sbjct: 324 VSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRL 383

Query: 182 NRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A E+F  ME   GC  ++ +Y+ LI G C  + +  A+ ++ E+    + P    +N 
Sbjct: 384 DDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV 443

Query: 241 LFIGLF 246
           L   ++
Sbjct: 444 LLEAMY 449



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 16/287 (5%)

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT---LMDGFCLTGRVNRAK 185
           N V ++  +  LCK+GK+E+A +    M +           T   ++   C  GRV+ A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT-------Y 238
            L  +M   G   ++ ++S+LIN  CK  +I+ A     E L +G+  T+ T       Y
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEA----QEFL-QGMNRTISTRASSCFSY 124

Query: 239 NTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           N+L   L +  +V +AF +F  M     V  D  +Y   IDG CK   +  A +L++ + 
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            L C  ++ +Y+  ++GL + GR+  A  ++  +       DV+TY+ +IH      K D
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +AH+LF  M ++G  P+ V +N L+ G  + ++  +  EL  +M ER
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 7/180 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+   GC+P+ +TY+TL+ G C  G    A+ +F+EM++   +      PD V
Sbjct: 280 EAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD------PDVV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G  + G   +A++L   M  +   PD V++N +I G   A   ++A  +F  M
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393

Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D G  P++VT++ ++  LC   ++ EA ++ + + ++ + P+   +N L++     G 
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV---TYNIMIHALCADGKM 356
           K  L+  +++  + GLCKSG+++ A+E   ++   +  +      T + +I  LC  G++
Sbjct: 6   KAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRV 65

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           D A  L   M  +G  PD    + L+    + ++  +  E L  M+
Sbjct: 66  DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++  +  FG +P ++TY+TL++  C+ G     L+L  EM          C P+ V
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDV 270

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL K+G  ++AK L+ +M    +     TYN +I G+       EA  L  EM
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V T++  +  LCK G+M +A Q L  M+   + P+   YNTL+ G+C  G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  + S+     + +Y+ L++G C+  E+E A  L  EM+++GI P +VTY  L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +  A + FDEM   G+  D++AY T I G  K G    A  L   +     
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  Y+ ++DGLCK G L+ A EL   +    +I D VTY  +IHA   +G++ K  +
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F +M +KG+ P  V +  L+ G        +       M E+
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613



 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 202/399 (50%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L ++++  GC PN +TY+ LINGL + G    A  L  EM+          K  A  Y  
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG------LKVSAYTYNP 309

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G   +G + +A  L  +M  K  +P V TYNS I G C     ++A +   +M+   
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+VV+++ ++   C+ G + +A  L + +  I + P    YNTL+DG C  G +  A+
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L V M + G   ++ +Y+IL+NG CK   +  A   + EML +G++     Y T  +G 
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGE 489

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++    RAF L +EM   G   D   Y   +DGLCK G + EA EL + +       D 
Sbjct: 490 LKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +I    ++GRL+   E+F+ +    L   VVTY ++IH     G++++A   F +
Sbjct: 550 VTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M+ KG+ P+ + +N+L+ G  +     +       M E+
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK 648



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 183/327 (55%), Gaps = 6/327 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  LF +L++    P ++TY+TL++GLCR G   VA  L  EMIN          PD 
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG------IAPDI 444

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +++G CK G +  A+E   +M  + +  D   Y + I G     D++ A  L  E
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+++ ++V++D LCK G +EEAS+LL+ M+  GV P+   Y +++      GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + + +E+F  M S G   +V +Y++LI+G+     +E A   +SEM  KGI P V+TYN+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ ++++A+  F EM   G+  + ++Y   I+  C  G   EAL L++ +    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWEL 327
            + D  ++S L+  L K  +L+   +L
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 193/381 (50%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  ++   G  P V TY++ I GLC+ G    A+    +M+  N        PD V
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVV 375

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G C+ G + KA  L  +++   + P +VTYN+++ G C   +   A++L +EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P++VT++++++  CK G +  A +  + M+  G+  +++ Y T + G    G  
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   M + G   ++  Y+++++G CK   +E A  L  +M+S G+ P  VTY ++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  ++ +  ++F EM   G+      Y   I G    G +  A   F  ++    
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LI+GLCK  R+  A+  F  +    +  +  +Y I+I+  C  G   +A  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L+  M  +GV PD    + L+
Sbjct: 676 LYKQMLDRGVQPDSCTHSALL 696



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 176/330 (53%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K+  V++   +  +M    ++PDV   N ++R     +  ++A  ++  M + G++P +V
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++ ++D  CK GK+++   LL  M + G  PN   YN L++G    G   +AK L   M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G K + ++Y+ LI GY     +  ALSL  EM+ KG  PTV TYN+   GL ++ ++
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A +   +M  + +  D  +Y T I G C+ G +++A  LF  LR +     I +Y+ L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +DGLC+ G L++A +L   +    +  D+VTY I+++  C  G +  A + F +M  +G+
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             D  A+ T ++G ++  +TS+   L   M
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEM 505



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 6/363 (1%)

Query: 39  LNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           L++F++MI           PD      I+  L  +  + KA E+   M +  I P +VTY
Sbjct: 184 LSVFDKMIKSR------LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTY 237

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+++  +C      +   L  EM  +G  PN VT++V+++ L K G+ E+A  L+  M++
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 297

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++ +A+ YN L+ G+   G +  A  L   M   G    V +Y+  I G CK   +  
Sbjct: 298 TGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+   S+ML+  + P VV+YNTL  G   +  + +AF LFDE++   +      Y T +D
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC+ G +  A +L   +       DI +Y+ L++G CK G L +A E F  +    L  
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D   Y   I      G   +A  L  +M AKG  PD + +N ++ G  +     +  ELL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 399 HRM 401
            +M
Sbjct: 538 QKM 540



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 6/223 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +L  ++ A G  P++I Y+ +++GLC+ G+   A  L ++M++     GV+  PD V
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD----GVI--PDYV 550

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+II    + G + K +E+  +M  K + P VVTY  +I G         A   F EM
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PNV+T++ +++ LCK  +M++A      M++ G+ PN + Y  L++  C  G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             A  L+  M   G + +  ++S L+    K+ +++    L S
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLES 713



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 6/151 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F ++ + G  P+V+TY+ LI+G    G    A   F EM     E G++  P+ + Y +
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM----QEKGIL--PNVITYNS 624

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+GLCK   +D+A     +M +K I P+  +Y  +I   C   +  EA  L+ +M+D+G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           VQP+  T S ++ +L K+ K++   QL  L+
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 22/293 (7%)

Query: 114 AKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           A RLF     Q G + +   F  I++ L +N  M  A  ++E +I   +     + + L+
Sbjct: 98  ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR---IVDVLI 154

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C++  V+                 V    +LI  Y K   +E  LS++ +M+   + 
Sbjct: 155 GG-CVSSEVS-----------------VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLS 196

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V   N +   L +   + +A +++  M   G+      Y T +D  CK G + + L+L
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              ++   C  +  +Y+ LI+GL K G  + A  L   + +  L     TYN +I+    
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G + +A  L  +M  KG +P    +N+ + G  +    S  ++ L  M   N
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 206/410 (50%), Gaps = 19/410 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ + GC PN  TY  L++GLC+ G  + AL +F+EM+    E G+V  PD  I
Sbjct: 198 ALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEML----ERGIV--PDVKI 251

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT ++  LC EG ++ A  LL  MK+    PD VTY   + G C A   +EA   F  + 
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G    ++ +S ++D L + G+ +E       M+   + P+  +Y  L+  F   GR  
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTK 371

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M+  G   + F Y+ L+        I+ A SL SEML   +     T+N + 
Sbjct: 372 DAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI---- 298
            GL +   +++A ++FDEM  HG       Y   IDGL + G + EA  LF  + +    
Sbjct: 432 CGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNP 491

Query: 299 ---LKCEL------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
              L+  L      D  S   L+DG+C+SG++  A++L   +    ++ DVVTYN +I+ 
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LC    +D A  LF +++ KG++PD + + TL+ G  R +  +    L  
Sbjct: 552 LCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 196/437 (44%), Gaps = 58/437 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  + +T++      P++  Y+ LI      G T  A  L +EM +     G V  PD  
Sbjct: 337 EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK----GFV--PDTF 390

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++  L   G +D+A+ L+ +M   N+  D  T+N +I G C     ++A ++F EM
Sbjct: 391 CYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEM 450

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL---------- 171
            + G  P V+T++ ++D L + G +EEA  L   M ++G  P+ F+  TL          
Sbjct: 451 GEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTES 509

Query: 172 ----MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
               +DG C +G+V +A +L   +   G   +V +Y+ LING CK K ++GAL L+ E+ 
Sbjct: 510 LRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQ 569

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK----- 282
            KGI P  +TY TL  GL+  H+   A  LF  + R G       Y T +  LC+     
Sbjct: 570 LKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLS 629

Query: 283 -------------------------------NGYIVEALELFRTLRILKCELDIRSYSCL 311
                                          +G++ E ++    +  +   L+   Y+  
Sbjct: 630 QAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIW 689

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL-DMEAKG 370
           + GLC+  ++  A  +FH L    ++       ++I+ LC D  ++ A D+ +  +  + 
Sbjct: 690 VIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRF 749

Query: 371 VAPDCVAFNTLMLGCIR 387
           +    V    L   CIR
Sbjct: 750 IVSQPVGNRLLRSLCIR 766



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 124/281 (44%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+      F  ++      G+ +EA +    M     RP AFVYN +       G +  A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L+  M S GC  N  +Y +L++G CK      AL ++ EML +GI P V  Y  L   
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    ++E A +L   M+ +G   D   Y  F+ GLCK G + EA   F  L+     L 
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  YSCLIDGL ++GR       +  +    +  D+  Y I+I      G+   A  L  
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +M+ KG  PD   +NTL+          +   L+  M + N
Sbjct: 379 EMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 126/308 (40%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
             + +++     A    EA   F  M D   +P    ++ +   L   G +  A  L   
Sbjct: 145 AAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNR 204

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  PN+  Y  LMDG C  G    A ++F  M   G   +V  Y++L++  C    
Sbjct: 205 MVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGR 264

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           IE A  L   M   G  P  VTY     GL +  +V+ AF  F+ +Q  G       Y  
Sbjct: 265 IEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSC 324

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDGL + G   E L  +  +       DI  Y+ LI    ++GR K A+ L   +    
Sbjct: 325 LIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKG 384

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            + D   YN ++ AL   G +D+A  L  +M    V  D    N ++ G  +     K +
Sbjct: 385 FVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAM 444

Query: 396 ELLHRMDE 403
           ++   M E
Sbjct: 445 QVFDEMGE 452



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 3/153 (1%)

Query: 254 AFKLFDEM---QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           A  +FD +   +  G+ A + A+R  +      G   EA+E F  +    C      Y+ 
Sbjct: 125 AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNA 184

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +   L   G + +A  L++ +     + +  TY +++  LC  G    A  +F +M  +G
Sbjct: 185 VFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG 244

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + PD   +  L+              LL  M E
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE 277


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 200/383 (52%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  GCEPNV TY+ LI+GLC +G   VA+ LF  M + +G F     P+ V
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM-SRDGVF-----PNTV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ L +   +  A  +L  M     +P++VTYN +I+G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+VT++ I+   C +G    A ++L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P V TYN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    ALE+F  +    C
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A +
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
               M   G  P    +  L+ G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 213/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   GCEPN +TYSTLINGLC +G    A +L  EMI      G++  P A 
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T  I  LC  G  + A  L + MK+K   P+V TY ++I G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN VT++ +++ L +N +++ A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KP   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++   C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRSYSCL-----------------------------------IDGLCKSGRLKIAWE 326
             ++++Y+ L                                   IDGLCK+G   +A E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F+ +     + +++TY+ +I AL  +GK+++A +LF ++E  G+ PD + +  ++   I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 387 RNNETSKVVELLHRM 401
            + +       L RM
Sbjct: 682 MSGKVEHAFNFLGRM 696



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L   G    +  YS L+  L R G T   ++ +  M++     GV  +P+ +IY  +I+ 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINA 224

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK+G V  A+ ++ ++ +  ++PD  TY S+I G C  +D + A ++F +M  +G +PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT+S +++ LC +G++ EA  L+  MI  G+ P A      +   C  G    A  LFV
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M++ GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P  VTYN L   L E  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 250 QVERAFKLFDEMQRHGV-----------------------------------AADTWAYR 274
           +++ AF + + M R+G                                    +A+   Y 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I G C +G    AL +   +R   C+ D  SY+ LI G CK  +++ A+ LF+ +   
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  + VTY  +I   C D K+D A  L   M+  G  P+   +N L+ G  + N  S  
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 395 VELLHRMDE 403
            EL   M E
Sbjct: 585 EELCKVMIE 593



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K+      P+  TY+++I G CR      AL +F +M          C+P+ V
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG------CEPNTV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC  G V++A +L+ +M    I P   T    I   C      +A RLF++M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +PNV T++ ++  LC +G ++ A  L   M + GV PN   YN L++      R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   GC  N+ +Y+ +I GYC   + + A+ + + ML +G    +VTYNT+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +      A ++ D M+  G   D W+Y   I G CK   +  A  LF  +     
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LIDG CK  +L  A  L   + R     +V TYN++IH L        A +
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M  +G+ P+ V +  ++ G  +N  TS  +E+ ++M E+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 188/398 (47%), Gaps = 30/398 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN++TY+ +I G C  G    A+ +   M+       +V       Y TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV------TYNTIIKGYCDS 473

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A  +L  M+D    PD  +Y  +I GFC  +    A  LF EM+D G+ PN VT+
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK+ K++ A+ LLE M + G RPN   YN L+ G       + A+EL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P ++TY++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +    C+  + +Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 G-----LCKSGRLKIAWELFHSLPRGVLIAD-------------------VVTYNIMIHA 349
           G     L    RL    ++  +   G    D                   V   N ++  
Sbjct: 714 GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN 773

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           L   G+  +A++L   M ++G+ PD  A+N+L+   +R
Sbjct: 774 LSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 181/420 (43%), Gaps = 65/420 (15%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+  +Y+ LI G C+      A  LF EM++       +C P+ V YT +IDG CK+
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKD 543

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A  LL  MK     P+V TYN +I G    N+ + A+ L   M+++G+ PNVVT+
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LCKNG    A ++   MI+ G  PN   Y++L+      G+V  A+ LF  +E 
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK------- 232
            G   +  +Y  +I  Y  + ++E A +    M+               KG+K       
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 233 ------PTVVT-----YNT--------LFIGLFEIH-----QVERAF------------- 255
                 P VV      Y T        +   L E+      QV+ A              
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 256 -KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L   M   G+  D  AY + +  L +   +  A+ +F+ +    CE+ +  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +   P 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 1/300 (0%)

Query: 106 CYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           C++ ++      F++M+ Q G++  +  +S ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  A+ +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P  VTY+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              +A  LF  ++   CE ++ +Y+ LI GLC SG LK+A  LFH + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I+ L  + ++  A  +   M   G +P+ V +N ++ G     +  K + +++ M +R
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 53/266 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVVC 56
           EA  LF +L+  G  P+ ITY  +I     +G    A N    MI    +     +GV+ 
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 57  K----------------PDAV--------------------------------IYTTIID 68
           K                PD V                                +   ++ 
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L   G   +A ELL  M  + + PD   YNS++       + + A  +F  M  QG + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++  +  ++  LC+  + +EA    E M+     P+  V   L+DG    G  +   E  
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 189 VSMESMGCKHNVFSYSILINGYCKNK 214
             ME+     +   Y+IL     K +
Sbjct: 893 HIMETRRYMPSFHIYTILAREASKKR 918


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TYS  I+ LC++      + L EE++     FG    PD       ID LCK+  +  A 
Sbjct: 227 TYSRWISALCQSNR----IELVEELLADMDRFGF--SPDIWACNIYIDCLCKQNRLHDAL 280

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +++ +M+ K   PDVVTY +V+   C     +EA  L+ EM+  G++P+VV    ++  L
Sbjct: 281 QMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGL 340

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CKN K+EEA +L   M+ + +  +  +YN L+ GF   G +++A  +   M + GC+  V
Sbjct: 341 CKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGV 400

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+IL+N YC    +E A +L ++M + G+ P   +YN L  GL + HQ+++AF    +
Sbjct: 401 VTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSD 460

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
               G   D  +    ID  CK   +  ALELF+ +     + D  +Y  LI+GL   G 
Sbjct: 461 HMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGY 520

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
             +A ELF  + +  +  +V  YNIM+H LC  G + +A  +FL M  K + PD V +NT
Sbjct: 521 YNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNT 580

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+    +N+   + ++L   M
Sbjct: 581 LIYWLGKNSRAMEALDLFKDM 601



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 202/375 (53%), Gaps = 10/375 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K++  G  P+V+TY+T++  LC       A+ L+EEM+    + G+  KPD V
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV----KMGL--KPDVV 331

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I GLCK   V++A EL  +M   NI   V  YN++I GF  A   ++A  +   M
Sbjct: 332 ACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFM 391

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P VVT++++++  C  G ME+A  L+  M   GV P+ + YN L+ G C T ++
Sbjct: 392 RTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQL 451

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A         +G   ++ S +ILI+ +CK K+++ AL L+ EM  KG++   VTY TL
Sbjct: 452 DKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF +     A +LF++M +  +  +   Y   +  LCK G +  A ++F  L +++ 
Sbjct: 512 INGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF--LHMIQK 569

Query: 302 EL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E+  DI +Y+ LI  L K+ R   A +LF  +    +  D +T+  +I+ L  +G+   A
Sbjct: 570 EILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLA 629

Query: 360 HDLFLDMEAKGVAPD 374
           ++++  M   G+  D
Sbjct: 630 YEVWEYMMENGIILD 644



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 175/381 (45%), Gaps = 8/381 (2%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           Y  L++G  R G     +  F+EM+ +G  EFG+    D   Y  ++   C    V+K  
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGI----DYNRYIGVLIKNCCFDLVEKYY 213

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            + L    K +     TY+  I   C +N     + L  +M   G  P++   ++ +D L
Sbjct: 214 GMALS---KGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCL 270

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK  ++ +A Q++E M   G  P+   Y T++   C   R + A  L+  M  MG K +V
Sbjct: 271 CKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDV 330

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +   LI G CKN ++E A  L S MLS  I+ +V  YN L  G +    +++A+ +   
Sbjct: 331 VACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISF 390

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+ +G       Y   ++  C  G + +A  L   +       D  SY+ L+ GLCK+ +
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQ 450

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L  A+             D+V+ NI+I A C   K+  A +LF +M+ KG+  D V + T
Sbjct: 451 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGT 510

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G       +   EL  +M
Sbjct: 511 LINGLFSVGYYNLAEELFEQM 531



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E L  ++ + +      Y  ++ G+  A   +     F EM+  G +   + ++  +  L
Sbjct: 141 EFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVL 200

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            KN   +   +   + +  G+    F Y+  +   C + R+   +EL   M+  G   ++
Sbjct: 201 IKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDI 260

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           ++ +I I+  CK   +  AL +  +M  KG  P VVTY T+   L    +   A  L++E
Sbjct: 261 WACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEE 320

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M + G+  D  A    I GLCKN  + EA EL   +  L  EL +  Y+ LI G  ++G 
Sbjct: 321 MVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGS 380

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A+ +   +        VVTYNI+++  C  G M+KA +L   ME  GV PD  ++N 
Sbjct: 381 IDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ 440

Query: 381 LMLGCIRNNETSK 393
           L+ G  + ++  K
Sbjct: 441 LLKGLCKTHQLDK 453



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 129/283 (45%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+     T+S  +  LC++ ++E   +LL  M + G  P+ +  N  +D  C   R+
Sbjct: 217 LSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRL 276

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M   G   +V +Y+ ++   C NK    A+ L+ EM+  G+KP VV    L
Sbjct: 277 HDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGAL 336

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +VE AF+L   M    +      Y   I G  + G I +A  +   +R   C
Sbjct: 337 IFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGC 396

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +Y+ L++  C  G ++ A  L   +    +  D  +YN ++  LC   ++DKA  
Sbjct: 397 EPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA 456

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              D    G   D V+ N L+    +  +    +EL   MD +
Sbjct: 457 FVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYK 499



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 6/319 (1%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCK 142
           L+  D  ++P VV  N V+RG    +DS  A R +     + G   +    + I+  L  
Sbjct: 78  LERLDIELDPFVV--NLVVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFV 132

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           +G     S+ L  +   GV  +  +Y  L+ G+   G+ +     F  M   GC+     
Sbjct: 133 DGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGID 192

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+  I    KN   +     Y   LSKG+  T  TY+     L + +++E   +L  +M 
Sbjct: 193 YNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMD 252

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
           R G + D WA   +ID LCK   + +AL++   +R      D+ +Y+ ++  LC + R  
Sbjct: 253 RFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFS 312

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  L+  + +  L  DVV    +I  LC + K+++A +L   M +  +      +N L+
Sbjct: 313 EAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALI 372

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  R     K   ++  M
Sbjct: 373 SGFWRAGSIDKAYTIISFM 391


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 205/381 (53%), Gaps = 14/381 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +F  +    CEP+V TY TL++GLC+      A++L +EM I+G       C P  
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG-------CFPSP 269

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+GLCK+G + +A +L+  M  K   P+ VTYN++I G C      +A  L   
Sbjct: 270 VTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDR 329

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PNVVT+  I++ L K G+  + + +L LM + G   N +VY+TL+ G    G+
Sbjct: 330 MVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGK 389

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  LF  M   G + N   YS +I+G C++ + + A+ + SEM +KG  P   T ++
Sbjct: 390 SQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSS 449

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G FE     RA +++ +M +H    +   Y   I GLCK+G + EA+ ++  +    
Sbjct: 450 LMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKG 509

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKM 356
           C+ D+ +YS +I+GL  +G ++ A +L++ +    P      DVVTYNI+++ LC    +
Sbjct: 510 CKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQ--PDVVTYNILLNTLCKQSSI 567

Query: 357 DKAHDLFLDMEAKGVAPDCVA 377
            +A DL   M  +G  PD V 
Sbjct: 568 SRAIDLLNSMLDRGCDPDLVT 588



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 204/385 (52%), Gaps = 6/385 (1%)

Query: 2   EAAALFTKLKA-FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF ++   F C+    ++++++N + + G    AL  +  +I   G  GV   P+ 
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVI---GAKGVSISPNV 199

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  +I  +CK G VD A ++   M  +   PDV TY +++ G C A+  +EA  L  E
Sbjct: 200 LTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE 259

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ VTF+V+++ LCK G +  A++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 260 MQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGK 319

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTYN 239
           + +A  L   M S  C  NV +Y  +ING  K  + ++GA  L + M  +G       Y+
Sbjct: 320 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL-ALMEERGYCVNEYVYS 378

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  GLF+  + + A  LF EM   G   +T  Y   IDGLC++G   +A+E+   +   
Sbjct: 379 TLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNK 438

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  +  + S L+ G  ++G    A E++  + +     + V Y+++IH LC DGK+ +A
Sbjct: 439 GCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 498

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLG 384
             ++  M  KG  PD VA+++++ G
Sbjct: 499 MMVWTQMLGKGCKPDVVAYSSMING 523



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 139/281 (49%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNV+TF++++  +CK G +++A Q+   M      P+ + Y TLMDG C   R++ A
Sbjct: 194 SISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEA 253

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M+  GC  +  ++++LING CK  ++  A  L   M  KG  P  VTYNTL  G
Sbjct: 254 VSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHG 313

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    ++E+A  L D M       +   Y T I+GL K G  ++   +   +      ++
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVN 373

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              YS LI GL K G+ + A  LF  +       + + Y+ +I  LC DGK D A ++  
Sbjct: 374 EYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +M  KG  P+    ++LM G      + + VE+   M + N
Sbjct: 434 EMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHN 474



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 140/249 (56%), Gaps = 9/249 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++ A +   ++  G   N   YSTLI+GL + G +  A++LF+EM     E       + 
Sbjct: 356 LDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYEL------NT 409

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y+ +IDGLC++G  D A E+L +M +K   P+  T +S+++GF  A +S+ A  ++ +
Sbjct: 410 IVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKD 469

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       N V +SV++  LCK+GK++EA  +   M+  G +P+   Y+++++G  + G 
Sbjct: 470 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGL 529

Query: 181 VNRAKELFVSMESMG--CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           V  A +L+  M   G   + +V +Y+IL+N  CK   I  A+ L + ML +G  P +VT 
Sbjct: 530 VEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTC 589

Query: 239 NTLFIGLFE 247
            T+F+ +  
Sbjct: 590 -TIFLRMLR 597



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 4/226 (1%)

Query: 183 RAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKG--IKPTVVTY 238
           +A +LF  M     CK    S++ ++N   +      AL  Y+ ++ +KG  I P V+T+
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTF 202

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +   + ++  V+ A ++F +M       D + Y T +DGLCK   I EA+ L   ++I
Sbjct: 203 NLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C     +++ LI+GLCK G L  A +L  ++     I + VTYN +IH LC  GK++K
Sbjct: 263 DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEK 322

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  L   M +    P+ V + T++ G ++         +L  M+ER
Sbjct: 323 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 18/181 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++T++   GC+P+V+ YS++INGL   G    A+ L+ EM+      G   +PD V
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ----GPDSQPDVV 552

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ LCK+  + +A +LL  M D+  +PD+VT    +R      D  +  R F++ 
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDE 612

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +              +  L K  ++  AS+++E+M+Q  + P    +  +++  C   +V
Sbjct: 613 L--------------VVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKV 658

Query: 182 N 182
            
Sbjct: 659 Q 659


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 200/383 (52%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  GCEPNV TY+ LI+GLC +G   VA+ LF  M + +G F     P+ V
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM-SRDGVF-----PNTV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ L +   +  A  +L  M     +P++VTYN +I+G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+VT++ I+   C +G    A ++L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P V TYN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    ALE+F  +    C
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A +
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
               M   G  P    +  L+ G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 213/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   GCEPN +TYSTLINGLC +G    A +L  EMI      G++  P A 
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T  I  LC  G  + A  L + MK+K   P+V TY ++I G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN VT++ +++ L +N +++ A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KP   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++   C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRSYSCL-----------------------------------IDGLCKSGRLKIAWE 326
             ++++Y+ L                                   IDGLCK+G   +A E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F+ +     + +++TY+ +I AL  +GK+++A +LF ++E  G+ PD + +  ++   I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 387 RNNETSKVVELLHRM 401
            + +       L RM
Sbjct: 682 MSGKVEHAFNFLGRM 696



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L   G    +  YS L+  L R G T   ++ +  M++     GV  +P+ +IY  +I+ 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINA 224

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK+G V  A+ ++ ++ +  ++PD  TY S+I G C  +D + A ++F +M  +G +PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT+S +++ LC +G++ EA  L+  MI  G+ P A      +   C  G    A  LFV
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M++ GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P  VTYN L   L E  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 250 QVERAFKLFDEMQRHGV-----------------------------------AADTWAYR 274
           +++ AF + + M R+G                                    +A+   Y 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I G C +G    AL +   +R   C+ D  SY+ LI G CK  +++ A+ LF+ +   
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  + VTY  +I   C D K+D A  L   M+  G  P+   +N L+ G  + N  S  
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 395 VELLHRMDE 403
            EL   M E
Sbjct: 585 EELCKVMIE 593



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+  TY+++I G CR      AL +F +M          C+P+ V Y+T+I+GLC  G 
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG------CEPNTVTYSTLINGLCDSGR 300

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V++A +L+ +M    I P   T    I   C      +A RLF++M ++G +PNV T++ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC +G ++ A  L   M + GV PN   YN L++      R+  A  +   M   G
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N+ +Y+ +I GYC   + + A+ + + ML +G    +VTYNT+  G  +      A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ D M+  G   D W+Y   I G CK   +  A  LF  +       +  +Y+ LIDG 
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK  +L  A  L   + R     +V TYN++IH L        A +L   M  +G+ P+ 
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V +  ++ G  +N  TS  +E+ ++M E+
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 188/398 (47%), Gaps = 30/398 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN++TY+ +I G C  G    A+ +   M+       +V       Y TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV------TYNTIIKGYCDS 473

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A  +L  M+D    PD  +Y  +I GFC  +    A  LF EM+D G+ PN VT+
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK+ K++ A+ LLE M + G RPN   YN L+ G       + A+EL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P ++TY++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +    C+  + +Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 G-----LCKSGRLKIAWELFHSLPRGVLIAD-------------------VVTYNIMIHA 349
           G     L    RL    ++  +   G    D                   V   N ++  
Sbjct: 714 GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN 773

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           L   G+  +A++L   M ++G+ PD  A+N+L+   +R
Sbjct: 774 LSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 181/420 (43%), Gaps = 65/420 (15%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+  +Y+ LI G C+      A  LF EM++       +C P+ V YT +IDG CK+
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKD 543

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A  LL  MK     P+V TYN +I G    N+ + A+ L   M+++G+ PNVVT+
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LCKNG    A ++   MI+ G  PN   Y++L+      G+V  A+ LF  +E 
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK------- 232
            G   +  +Y  +I  Y  + ++E A +    M+               KG+K       
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 233 ------PTVVT-----YNT--------LFIGLFEIH-----QVERAF------------- 255
                 P VV      Y T        +   L E+      QV+ A              
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 256 -KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L   M   G+  D  AY + +  L +   +  A+ +F+ +    CE+ +  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +   P 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 1/300 (0%)

Query: 106 CYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           C++ ++      F++M+ Q G++  +  +S ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  A+ +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P  VTY+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              +A  LF  ++   CE ++ +Y+ LI GLC SG LK+A  LFH + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I+ L  + ++  A  +   M   G +P+ V +N ++ G     +  K + +++ M +R
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 94/267 (35%), Gaps = 53/267 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVVC 56
           EA  LF +L+  G  P+ ITY  +I     +G    A N    MI    +     +GV+ 
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 57  K----------------PDAV--------------------------------IYTTIID 68
           K                PD V                                +   ++ 
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L   G   +A ELL  M  + + PD   YNS++       + + A  +F  M  QG + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++  +  ++  LC+  + +EA    E M+     P+  V   L+DG    G  +   E  
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE 215
             ME+     +   Y+IL     K + 
Sbjct: 893 HIMETRRYMPSFHIYTILAREASKKRS 919


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 207/391 (52%), Gaps = 6/391 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+   G  P  ++Y+++I G CR G+  +A ++F +M++         KP+ +
Sbjct: 471 EATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG------LKPNVI 524

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++DG  K G  + A  +  +M D+NI P   TYN  I G C    ++EA+ +  + 
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF 584

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +T++ IMD   K G +  A      M + GV PN   Y TL++GFC     
Sbjct: 585 VEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNT 644

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M + G + ++ +Y  LI+G+CK ++IE A  L+SE+L  G+ P  V YN+L
Sbjct: 645 DLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSL 704

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   ++ +E A  L   M   G++ D   Y T IDGL K G +V AL+L+  +     
Sbjct: 705 ISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGI 764

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI  Y+ LI+GLC  G+L+ A ++   + R  +  +V  YN +I      G + +A  
Sbjct: 765 IPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR 824

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           L  +M  KG+ P+   ++ L+ G I+   ++
Sbjct: 825 LHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 218/464 (46%), Gaps = 63/464 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----------- 49
           + A   F K+   G  PN +TY+ LI   C+ G+   A +L+ +M N N           
Sbjct: 366 VSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSL 425

Query: 50  --GEFGVVCKPDA---------------VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
             G   V  + +A                 Y +++  LCKEG + +A  L  +M DK + 
Sbjct: 426 IRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE------------- 139
           P  V+YNS+I G C   + + A  +F +M+D G++PNV+T+S++MD              
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYV 545

Query: 140 ----------------------LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
                                 LCK G+  EA  +L+  ++ G  P    YN++MDGF  
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK 605

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G V+ A   +  M   G   NV +Y+ LING+CKN   + AL + +EM +KG++  +  
Sbjct: 606 EGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAA 665

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G  +   +E A  LF E+   G++ ++  Y + I G      +  AL L + + 
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+++Y+ LIDGL K GRL +A +L+  +    +I D++ Y ++I+ LC  G+++
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            A  +  +ME   + P+   +N L+ G  +     +   L + M
Sbjct: 786 NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 205/401 (51%), Gaps = 7/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++ + G + NV+  +TL+ G C+    + AL  F++M N NG       P+ 
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM-NENGP-----SPNR 384

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I+  CK G + KA +L  QMK+KNI P V   NS+IRGF       EA +LF E
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +   +  N+ T++ ++  LCK GKM EA+ L + M+  G+ P    YN+++ G C  G 
Sbjct: 445 AVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGN 503

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  M   G K NV +YSIL++GY KN + E A  ++  M+ + I P+  TYN 
Sbjct: 504 LDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNI 563

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              GL ++ +   A  +  +    G       Y + +DG  K G +  AL  +R +    
Sbjct: 564 KINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESG 623

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +Y+ LI+G CK+    +A ++ + +    L  D+  Y  +I   C    ++ A 
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETAS 683

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF ++   G++P+ V +N+L+ G    N     + L  RM
Sbjct: 684 WLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRM 724



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 172/367 (46%), Gaps = 36/367 (9%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K+   ++AK+  L+ K + +  D   Y+ VI+ FC   D   A  L  +M D+G  P+  
Sbjct: 256 KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+ ++    K G M EA +L + M+  GV+ N  V  TL+ G+C   ++  A E F  M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   N  +Y++LI   CKN  +  A  LY++M +K I PTV   N+L  G  ++   
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--------------- 296
           E A KLFDE     + A+ + Y + +  LCK G + EA  L++ +               
Sbjct: 436 EEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494

Query: 297 ------------------RILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
                              +L C L  ++ +YS L+DG  K+G  + A+ +F  +    +
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +    TYNI I+ LC  G+  +A D+      KG  P C+ +N++M G I+    S  + 
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614

Query: 397 LLHRMDE 403
               M E
Sbjct: 615 AYREMCE 621



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 34/332 (10%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           + + D+  YN ++  +  AN  N+A   F  +++  + P +   + ++  L KN  + EA
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEA 228

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++ E M+  GV  + F  + +M           AK+ F+  +S G K +  +YSI+I  
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +CKN ++E A  L  +M  KG  P+  T+ ++     +   +  A +L DEM   GV  +
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF- 328
                T + G CK   +V ALE F  +       +  +Y+ LI+  CK+G +  A++L+ 
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408

Query: 329 --------------HSLPRGVL-------------------IADVVTYNIMIHALCADGK 355
                         +SL RG L                   IA++ TYN ++  LC +GK
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGK 468

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           M +A  L+  M  KG+AP  V++N+++LG  R
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCR 500



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 90/201 (44%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ L+N Y K  ++  A+  ++ ++   I P +   N L   L +   +  A +++++M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             GV  D +     +    K+    EA + F   +    +LD  +YS +I   CK+  ++
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L   +     +    T+  +I A    G M +A  L  +M + GV  + V   TL+
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 383 LGCIRNNETSKVVELLHRMDE 403
            G  + ++    +E   +M+E
Sbjct: 357 KGYCKQDKLVSALEFFDKMNE 377


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 200/383 (52%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  GCEPNV TY+ LI+GLC +G   VA+ LF  M + +G F     P+ V
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM-SRDGVF-----PNTV 391

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ L +   +  A  +L  M     +P++VTYN +I+G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+VT++ I+   C +G    A ++L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P V TYN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    ALE+F  +    C
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A +
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 691

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
               M   G  P    +  L+ G
Sbjct: 692 FLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 213/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   GCEPN +TYSTLINGLC +G    A +L  EMI      G++  P A 
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T  I  LC  G  + A  L + MK+K   P+V TY ++I G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN VT++ +++ L +N +++ A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KP   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++   C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRSYSCL-----------------------------------IDGLCKSGRLKIAWE 326
             ++++Y+ L                                   IDGLCK+G   +A E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F+ +     + +++TY+ +I AL  +GK+++A +LF ++E  G+ PD + +  ++   I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 387 RNNETSKVVELLHRM 401
            + +       L RM
Sbjct: 682 MSGKVEHAFNFLGRM 696



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L   G    +  YS L+  L R G T   ++ +  M++     GV  +P+ +IY  +I+ 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINA 224

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK+G V  A+ ++ ++ +  ++PD  TY S+I G C  +D + A ++F +M  +G +PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT+S +++ LC +G++ EA  L+  MI  G+ P A      +   C  G    A  LFV
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M++ GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P  VTYN L   L E  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 250 QVERAFKLFDEMQRHGV-----------------------------------AADTWAYR 274
           +++ AF + + M R+G                                    +A+   Y 
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I G C +G    AL +   +R   C+ D  SY+ LI G CK  +++ A+ LF+ +   
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  + VTY  +I   C D K+D A  L   M+  G  P+   +N L+ G  + N  S  
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 395 VELLHRMDE 403
            EL   M E
Sbjct: 585 EELCKVMIE 593



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K+      P+  TY+++I G CR      AL +F +M          C+P+ V
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG------CEPNTV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+GLC  G V++A +L+ +M    I P   T    I   C      +A RLF++M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +PNV T++ ++  LC +G ++ A  L   M + GV PN   YN L++      R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   GC  N+ +Y+ +I GYC   + + A+ + + ML +G    +VTYNT+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +      A ++ D M+  G   D W+Y   I G CK   +  A  LF  +     
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LIDG CK  +L  A  L   + R     +V TYN++IH L        A +
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M  +G+ P+ V +  ++ G  +N  TS  +E+ ++M E+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 188/398 (47%), Gaps = 30/398 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN++TY+ +I G C  G    A+ +   M+       +V       Y TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV------TYNTIIKGYCDS 473

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A  +L  M+D    PD  +Y  +I GFC  +    A  LF EM+D G+ PN VT+
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK+ K++ A+ LLE M + G RPN   YN L+ G       + A+EL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P ++TY++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +    C+  + +Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 G-----LCKSGRLKIAWELFHSLPRGVLIAD-------------------VVTYNIMIHA 349
           G     L    RL    ++  +   G    D                   V   N ++  
Sbjct: 714 GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSN 773

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           L   G+  +A++L   M ++G+ PD  A+N+L+   +R
Sbjct: 774 LSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 181/420 (43%), Gaps = 65/420 (15%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+  +Y+ LI G C+      A  LF EM++       +C P+ V YT +IDG CK+
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKD 543

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A  LL  MK     P+V TYN +I G    N+ + A+ L   M+++G+ PNVVT+
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D LCKNG    A ++   MI+ G  PN   Y++L+      G+V  A+ LF  +E 
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK------- 232
            G   +  +Y  +I  Y  + ++E A +    M+               KG+K       
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723

Query: 233 ------PTVVT-----YNT--------LFIGLFEIH-----QVERAF------------- 255
                 P VV      Y T        +   L E+      QV+ A              
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783

Query: 256 -KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L   M   G+  D  AY + +  L +   +  A+ +F+ +    CE+ +  Y  LI  
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 843

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +   P 
Sbjct: 844 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 903



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 1/300 (0%)

Query: 106 CYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           C++ ++      F++M+ Q G++  +  +S ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  A+ +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P  VTY+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              +A  LF  ++   CE ++ +Y+ LI GLC SG LK+A  LFH + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I+ L  + ++  A  +   M   G +P+ V +N ++ G     +  K + +++ M +R
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 53/266 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVVC 56
           EA  LF +L+  G  P+ ITY  +I     +G    A N    MI    +     +GV+ 
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 57  K----------------PDAV--------------------------------IYTTIID 68
           K                PD V                                +   ++ 
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L   G   +A ELL  M  + + PD   YNS++       + + A  +F  M  QG + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           ++  +  ++  LC+  + +EA    E M+     P+  V   L+DG    G  +   E  
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 189 VSMESMGCKHNVFSYSILINGYCKNK 214
             ME+     +   Y+IL     K +
Sbjct: 893 HIMETRRYMPSFHIYTILAREASKKR 918


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 223/402 (55%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +LF ++K  G  P+++TY++LI+G  + G    +  LFEEM +      V C+PD + 
Sbjct: 271 AKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD------VGCEPDVIT 324

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  CK   + KA   L +MK+  + P+VVTY+++I   C  +   +A +  ++M 
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  T++ ++D  CK G + +A +L + M+Q+ V  N   Y TL+DG C  GR+ 
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A++LF +M   G   N+ +Y+ L++G+ KNK +E AL L  E+  K IKP ++ Y T+ 
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL   +++E    +  EM+  G+ A++  Y   +D   K G  VEAL L + +  L  E
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHD 361
           + I ++  LIDGLCK G ++ A + F  +    L   +V     +I  LC +  ++ A  
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKK 624

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF +M+ K + PD +A+  L+ G +++ +  + + +  RM E
Sbjct: 625 LFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSE 666



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  LF ++K  GCEP+VITY+ LIN  C+      A +   EM N         KP+ V
Sbjct: 305 ESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG------LKPNVV 358

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+ID LCKE  + +A + LL M+   ++P+  TY S+I   C A   ++A +L  EM
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   V  NVVT++ ++D LCK G+M EA  L   MI+ GV PN   Y  L+ G     RV
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRV 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   ++    K ++  Y  +I G C   ++E    + SEM + GI+   V Y   
Sbjct: 479 ENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIR 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+  +   A  L  EM   GV      +   IDGLCK G + EA++ F  +     
Sbjct: 539 MDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNL 598

Query: 302 EL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           +  ++   + LIDGLCK+  ++ A +LF  +    ++ D + Y  +I          +A 
Sbjct: 599 QPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEAL 658

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++   M   G+  D  A+ +L+ G  + N   +    L+ M
Sbjct: 659 NIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEM 699



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 187/336 (55%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +     + G +++A +   +M    + P   + N+ +         + +
Sbjct: 177 VCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLS 236

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            + F +M+  G+  +V T+++++  +CK G M  A  L   M Q+G+ P+   YN+L+DG
Sbjct: 237 NKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG 296

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +   G ++ +  LF  M+ +GC+ +V +Y+ LIN +CK +++  A     EM + G+KP 
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTY+TL   L + H +++A K   +M+R G++ + + Y + ID  CK GY+ +AL+L  
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  ++   ++ +Y+ L+DGLCK GR+  A +LF ++ +  +  ++ TY  ++H    + 
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +++ A +L  +++ K + PD + + T++ G    N+
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNK 512



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 30/305 (9%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMING-------------NGEFG----------- 53
           NV+TY+TL++GLC+ G  + A +LF  MI               +G              
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485

Query: 54  -----VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                   KPD ++Y TII GLC +  +++ + ++ +MK   I  + V Y   +  +   
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN-AFV 167
             + EA  L  EM D GV+  +VTF V++D LCK G +EEA      M    ++PN   V
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAV 605

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              L+DG C    +  AK+LF  M+      +  +Y+ LI+G  K+K+ + AL++ S M 
Sbjct: 606 CTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMS 665

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             G++  +  Y +L  GL + + V++A    +EM   G+  D       +    + G I 
Sbjct: 666 ELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSID 725

Query: 288 EALEL 292
           EA+EL
Sbjct: 726 EAIEL 730



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++   G E  ++T+  LI+GLC+ G    A++ F  M + N       +P+ 
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFN------LQPNN 602

Query: 61  V-IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V + T +IDGLCK  +++ AK+L  +M+DKN+ PD + Y ++I G     D  EA  +  
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + G++ ++  ++ ++  L +   +++A   L  MI  G+ P+  +   L+  +   G
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELG 722

Query: 180 RVNRAKEL 187
            ++ A EL
Sbjct: 723 SIDEAIEL 730


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 206/404 (50%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  ++  +  +G  P V TY+T+++  C+ G    AL+L  +M     E G  C P  
Sbjct: 219 VKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKM----QERG--CYPSE 272

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+GL K+G + +AK L+ +M    +     TYN +I G+C      EA  L+ E
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P V + + IM   CK GKM +A Q L  M++  + P+   YNTL+ GFC  G 
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  L   +       N+ +Y+ LI+G C+  ++E AL L  +M+++GI P VVTY  
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++  +  A + FDEM   G+A D +AY   I G  K G   +A +L   +    
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+  ++GLCK G L+ A EL   + R   + D VTY   +HA   +G + +  
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++F DM ++G  P  V +  L+     N      +     M E+
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEK 616



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 172/321 (53%), Gaps = 6/321 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +L+      N++TY+TLI+GLCR G    AL L E+MIN          PD V
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG------IHPDVV 448

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G CK G +  AKE   +M    + PD   Y + I G     D+ +A +L  EM
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V+T++V ++ LCK G +EEA +LL+ MI+ G  P+   Y + M      G +
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              +E+F  M S G    V +Y++LI+ +  N  ++ A++ + EM  KG+ P V+TYN L
Sbjct: 569 REGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++++A K F EMQ  G+  + + Y   I+  C  G   EAL L+  +   + 
Sbjct: 629 INGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRI 688

Query: 302 ELDIRSYSCLIDGLCKSGRLK 322
             D  ++  L+  L K  +++
Sbjct: 689 RPDSCTHGALLKKLDKDYKVQ 709



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL+ ++   G  P V +++T++ G C+ G    A     +M+  N        PD 
Sbjct: 324 VEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN------LMPDI 377

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+I G C+ G + +A  LL +++ +N++ ++VTYN++I G C   D   A +L  +
Sbjct: 378 ISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKED 437

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+VVT++V+++  CK G M  A +  + M+ +G+ P+ F Y   + G    G 
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A +L   M + G   +V +Y++ +NG CK   +E A  L  +M+  G  P  VTY +
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                 E   +    ++F +M   G       Y   I     NG +  A+  F  ++   
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              ++ +Y+ LI+G CK  ++  A + F  +    +  +  TY I+I+  C  GK  +A 
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+  M  K + PD      L+
Sbjct: 678 RLYAQMLGKRIRPDSCTHGALL 699



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 6/214 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+VITY+  +NGLC+ G+   A  L ++MI  +G       PD V YT+ +    + 
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIR-DGHV-----PDHVTYTSFMHAHMEN 565

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + + +E+   M  +   P VVTY  +I         + A   F+EM ++GV PNV+T+
Sbjct: 566 GHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITY 625

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V+++  CK  KM++A +    M + G+ PN + Y  L++  C  G+   A  L+  M  
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              + +  ++  L+    K+ +++    + S +L
Sbjct: 686 KRIRPDSCTHGALLKKLDKDYKVQAVQFIESLIL 719



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 90/187 (48%)

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL +Y  M   GI+PTV TYNT+     +  +V+RA  L  +MQ  G       +   I+
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GL K G + +A  L + +      +   +Y+ LI G CK G L  A  L+  +    +  
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            V ++N +++  C +GKM  A     DM  K + PD +++NTL+ G  R     +   LL
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400

Query: 399 HRMDERN 405
             +  RN
Sbjct: 401 DELRFRN 407



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 15/255 (5%)

Query: 155 LMIQIGVRPNAFVY----NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++ Q G + + + +      L+D  CL        E  +S E  G         +LI GY
Sbjct: 129 VLTQPGFKTSEYAFCAILQILVDN-CLMKSAYWVMERIISFEMYGI------VDVLIGGY 181

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              +     L ++ +M+     P V   N +   L + + + +A +++  M  +G+    
Sbjct: 182 LNYQ----CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTV 237

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T +   CK G +  AL+L   ++   C     +++ LI+GL K G L+ A  L   
Sbjct: 238 TTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQE 297

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L     TYN +I   C  G + +A  L+ +M  +GV+P   + NT+M G  +  +
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357

Query: 391 TSKVVELLHRMDERN 405
            S   + L  M ++N
Sbjct: 358 MSDARQQLSDMLKKN 372


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 208/428 (48%), Gaps = 36/428 (8%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            +++ +K  G EPNV TY+ L+  LC+      A  L  EM N        C+PD V YT
Sbjct: 170 PIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKG------CEPDVVSYT 223

Query: 65  TIIDGLCKEGFVDKAKEL------------------------------LLQMKDKNINPD 94
           T+I  + K G V++A+EL                              L QM +K I+P+
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           V+TY++VI       +   A  ++ +M  +G  PNV TF+ +M      G++ EA  +  
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M + G  PN   YNTL+ G C  G++  A  +   ME  GC  NV +Y  LI+G+ K  
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           ++ GA  ++++M++ G  P VV Y ++   L       +A+ L ++M       +T  + 
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFN 463

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           TFI GLC +G +  A+ LF  +    C  +I++Y+ ++DGL K  R+K A EL   +   
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            +  ++VTYN +    C  GK ++A  L   M   GV PD + +NTL        +    
Sbjct: 524 GMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTA 583

Query: 395 VELLHRMD 402
           ++LL ++ 
Sbjct: 584 IQLLDKLS 591



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 204/403 (50%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++ FGC+P V  Y+ L++ +       +   ++  M     E      P+  
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE------PNVY 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LCK   VD A +LL++M +K   PDVV+Y +VI          EA+ L I  
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF 245

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                QPNV  ++ +++  C+  K++E   LL  M++ G+ PN   Y+T++      G V
Sbjct: 246 -----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNV 300

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  ++  M   GC  NV++++ L+ GY     +  AL++++ M  +G +P VV YNTL
Sbjct: 301 ELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTL 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++  A  +  +M+R+G + +   Y   IDG  K G +V A E++  +    C
Sbjct: 361 IHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++  Y+ +++ LC+S     AW L   +       + VT+N  I  LC  G+++ A +
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN 480

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  ME  G +P+   +N ++ G ++ N   + +EL+  M+E+
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 163/320 (50%), Gaps = 9/320 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  ++ ++   G EPNV+ Y+TLI+GLC  G    A+++  +M   NG     C P+ 
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM-ERNG-----CSPNV 389

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +IDG  K G +  A E+  +M      P+VV Y S++   C ++  ++A  L  +
Sbjct: 390 STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      PN VTF+  +  LC +G++E A  L   M Q G  PN   YN ++DG     R
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A EL   ME  G + N+ +Y+ +  G+C   + E AL L  +ML  G+KP  +TYNT
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEA-LELFRTLRI 298
           L        +V+ A +L D++   G    +  AY + + G+C    + EA L L + L  
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629

Query: 299 LKCELDIRSYSCLIDGLCKS 318
             C L+  +++ L+ GL  S
Sbjct: 630 GIC-LNAATWNALVRGLFNS 648



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 30/336 (8%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           +TY  +I       D +  + L  +M  +G+  +   F  +++   + G  E+A ++   
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           + + G +P   +YN L+D      R    + ++ +M+  G + NV++Y+IL+   CKN  
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA--------------------- 254
           ++GA  L  EM +KG +P VV+Y T+   + ++ +VE A                     
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGF 259

Query: 255 ---------FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                    F L  +M   G+  +   Y T I  L   G +  AL ++  + +  C  ++
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ L+ G    GR+  A  +++ +       +VV YN +IH LC+ GKM +A  +   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ME  G +P+   +  L+ G  +  +     E+ ++M
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +K  G +PNV TY+  I   CRT     A +L+E M+      GV+   D V 
Sbjct: 223 ARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVT 276

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + ++ GLC++G   +A  L  +M      P+ VTY ++I     A    E   L  EM+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  ++VT++ +MD L K GK +E    L   +   +  N   Y  L+D  C    V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++ + ME      NV ++S +ING+ K   ++ A      M  +GI P VVTY TL 
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    + A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  +Y+ LIDGL K+G +  A++    L    ++ D V YN+ I+ LC  GK  +A  +
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M   G+ PD   +NT+++   R  ET+K ++LLH M
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF ++   G  PN +TY TLI+ L + G     L+L  EM++     GVV   D V
Sbjct: 292 EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D L K+G  D+ K+ L      N++ + VTY  +I   C A++ +EA+++ +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVVTFS +++   K G +++A++   +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E++  M   G + N F    L+NG  +N +IE A++L+ +    G+    V Y TL
Sbjct: 466 DAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA  +   +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGL 585

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I   C+ G    A +L H +    +  +++TYN ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M + G +P  +    ++  C ++     ++++   M
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 197/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+  +   G   +V+T S L+ GLCR G    A  LF EM     + G V  P+ V
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM----DKVGAV--PNHV 310

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L K G   +   LL +M  + +  D+VTY +++        ++E K      
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   +  N VT++V++D LCK   ++EA Q+L  M +  + PN   ++++++GF   G +
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E    M+  G   NV +Y  LI+G+ K +  + AL +Y +ML +G++      ++L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSL 490

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  LF +    G++ D   Y T IDGL K G +  A +  + L     
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y+  I+ LC  G+ K A  +   +    L  D  TYN MI + C  G+  KA  
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M+   + P+ + +NTL+ G        K   LL+ M
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 194/438 (44%), Gaps = 76/438 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF      G   + + Y+TLI+GL + G    A    +E+++ N        PDAV
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN------MLPDAV 555

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I+ LC  G   +AK +L +M++  + PD  TYN++I   C   ++ +A +L  EM
Sbjct: 556 VYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF--------------- 166
               ++PN++T++ ++  L   G +E+A  LL  M+  G  P++                
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 167 --------------------VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                               VYNTL+   C  G   +A  +   M   G   +  +++ L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK+  ++ A + Y++ML + I P + T+NTL  GL  + ++  A  +  EM++ G+
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y   + G  K    VEA+ L+       CE+  + +                  
Sbjct: 796 EPNNLTYDILVTGHGKQSNKVEAMRLY-------CEMVGKGF------------------ 830

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                     +  V TYN +I      G M +A +LF DM+ +GV P    ++ L+ G  
Sbjct: 831 ----------VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 387 RNNETSKVVELLHRMDER 404
           R    ++V + L  M E+
Sbjct: 881 RIRNGTEVKKCLKDMKEK 898



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 195/424 (45%), Gaps = 29/424 (6%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------ING---NGE 51
           +K  G  PNV+TY TLI+G  +      AL ++ +M               +NG   NG+
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499

Query: 52  F-----------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS 100
                       G     D V YTT+IDGL K G +  A +   ++ D+N+ PD V YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
            I   C      EAK +  EM + G++P+  T++ ++   C+ G+  +A +LL  M    
Sbjct: 560 FINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++PN   YNTL+ G   TG V +AK L   M S G   +  ++  ++    +++ ++  L
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++  M++ G+   +  YNTL   L       +A  + +EM   G+A DT  +   I G 
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK+ ++  A   +  +       +I +++ L+ GL   GR+  A  +   + +  L  + 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           +TY+I++          +A  L+ +M  KG  P    +N L+    +    ++  EL   
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 401 MDER 404
           M +R
Sbjct: 860 MQKR 863



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P  + Y+ L+  L    H   A  +  EM      F      D V   T++ GLC+ G 
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQ 150

Query: 76  VDKAKELLLQMKDKNINP-DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           VD A  L    +   I+  DV+ +N++I G+C   D+  A  +   M  QG+  +VV ++
Sbjct: 151 VDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++   C+ G+++ A  +L++M + GV PN   Y   +  +C T  V  A +L+  M   
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   +V + S L+ G C++     A +L+ EM   G  P  VTY TL   L +  + +  
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKEL 328

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L  EM   GV  D   Y   +D L K G   E  +  R        L+  +Y+ LID 
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDA 388

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+  +  A ++   +    +  +VVT++ +I+     G +DKA +    M+ +G+ P+
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
            V + TL+ G  +       +E+ H M
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDM 475



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 39/351 (11%)

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           ++  P  V YN ++      +D   A  +  EM  +GV  + VT + ++  LC+NG+++ 
Sbjct: 97  RSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A+ L +    I    +   +NTL+ G+C  G    A  +   M + G   +V  Y+ L+ 
Sbjct: 154 AAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+C+  +++ A  +   M   G+ P V TY    +       VE AF L++ M R+GV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D       + GLC++G   EA  LFR +  +    +  +Y  LID L K+GR K    L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 329 HSL-PRGVLIADV----------------------------------VTYNIMIHALCAD 353
             +  RGV++  V                                  VTY ++I ALC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +D+A  + L+ME K ++P+ V F++++ G ++     K  E    M ER
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 136/324 (41%), Gaps = 29/324 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           +A  L  ++K    +PN+ITY+TL+ GL  TG    A  L  EM++       +      
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 58  -------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                     D  +Y T++  LC  G   KA  +L +M    I 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +T+N++I G C ++  + A   + +M+ Q + PN+ TF+ ++  L   G++ EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G+ PN   Y+ L+ G         A  L+  M   G    V +Y+ LI+ + K
Sbjct: 787 LIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+  G +     
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 273 YRTFIDGLCKNGYIVEALELFRTL 296
                    K G   +A  L + L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G EPN +TY  L+ G  +  + + A+ L+ EM+ G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    K G + +AKEL   M+ + ++P   TY+ ++ G+    +  E K+   +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            ++G  P+  T S I     K G   +A +LL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++   G  P V TY+ LI+   + G    A  LF++M     + GV   P +
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM----QKRGV--HPTS 869

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             Y  ++ G  +     + K+ L  MK+K  +P   T + + R F     + +A+RL 
Sbjct: 870 CTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 204/400 (51%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ + G  P+  T++  I   C TG   VAL L   +     E G   KP A 
Sbjct: 28  QAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL----PERGCDVKPLA- 82

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GL   G    A+ L  +M  +++ PDV T+N+V+   C   D  E+  L  ++
Sbjct: 83  -YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKV 141

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  N  T ++ +  LC+ G++EEA  L+E M    + P+   YNTLM G C   +V
Sbjct: 142 LKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKV 200

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +    M + GC  + F+Y+ +I+GYCK   ++ A  L  + + KG  P  VTY +L
Sbjct: 201 QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSL 260

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     VERA +LF+E Q   +  D   Y + + GLC+ G I+ AL++   +    C
Sbjct: 261 INGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGC 320

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +Y+ +I+GLCK G +  A  + +       + DV T+N MI   C   K+D A  
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ 380

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G+APD + +N+++ G  +  +  +V E    M
Sbjct: 381 LVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 212/437 (48%), Gaps = 42/437 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   L   GC+   + Y T++ GL   GH   A +LF+EM+  +        PD   
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD------VFPDVAT 117

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++  LC++G + ++  LL ++  + ++ +  T N  IRG C      EA  L +E M
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESM 176

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D  + P+VVT++ +M  LCK+ K++EA+Q L  M+  G  P+ F YNT++DG+C    + 
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL       G   +  +Y  LING C   ++E AL L++E  +K +KP +V YN+L 
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA------------- 289
            GL     +  A ++ +EM   G   D W Y   I+GLCK G I +A             
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 290 ----------------------LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                                 L+L   + +     D  +Y+ +++GLCK+G+ K   E 
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +       + +TYNI+I   C   ++++A  + + M   G+ PD ++FNTL+ G  R
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476

Query: 388 NNETSKVVELLHRMDER 404
           N +      L  ++DE+
Sbjct: 477 NGDLDGAYLLFQKLDEK 493



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 199/382 (52%), Gaps = 7/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME+ AL  K+   G   N  T +  I GLC  G    A+ L E M            PD 
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-------DAYIAPDV 184

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ GLCK+  V +A + L +M ++   PD  TYN++I G+C  +   EA  L  +
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ VT+  +++ LC  G +E A +L        ++P+  VYN+L+ G C  G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++   M   GC  ++++Y+I+ING CK   I  A  + ++ + KG  P V T+NT
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G  +  +++ A +L + M  +G+A D   Y + ++GLCK G   E  E F  + +  
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +Y+ LI+  CK  +L+ A  +   + +  L+ D +++N +IH  C +G +D A+
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY 484

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            LF  ++ KG +     FN L+
Sbjct: 485 LLFQKLDEKGYSATADTFNILI 506



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 210/400 (52%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA    ++   GC P+  TY+T+I+G C+      A  L ++ I      G V  PD V
Sbjct: 202 EAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK----GFV--PDRV 255

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLC EG V++A EL  + + K++ PD+V YNS+++G C       A ++  EM
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 315

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ T++++++ LCK G + +A+ ++   I  G  P+ F +NT++DG+C   ++
Sbjct: 316 VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL 375

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  + +     + EM+ KG +P  +TYN L
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +I+Q+E A  +   M + G+  DT ++ T I G C+NG +  A  LF+ L     
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 495

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ LI        +++A ++F  +       D+ TY +++   C    +D+A+ 
Sbjct: 496 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYV 555

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +M +KG  P    F  ++     N+  S+ V ++H M
Sbjct: 556 HLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIM 595



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 190/383 (49%), Gaps = 7/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   + A+   P+V+TY+TL+ GLC+      A      M+N        C PD  
Sbjct: 168 EAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQG------CIPDDF 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TIIDG CK   + +A ELL     K   PD VTY S+I G C   D   A  LF E 
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P++V ++ ++  LC+ G +  A Q++  M++ G  P+ + YN +++G C  G +
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +       G   +VF+++ +I+GYCK  +++ AL L   M   GI P  +TYN++
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + +   + F+EM   G   +   Y   I+  CK   + EA  +   +     
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  S++ LI G C++G L  A+ LF  L      A   T+NI+I A  +   M  A  
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F +M +KG  PD   +  L+ G
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDG 543



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L       G  P+ +TY +LINGLC  G    AL LF E    +       KPD V
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD------LKPDLV 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y +++ GLC++G +  A +++ +M +   +PD+ TYN VI G C   + ++A  +  + 
Sbjct: 291 VYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V TF+ ++D  CK  K++ A QL+E M   G+ P+A  YN++++G C  G+ 
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKA 410

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E F  M   GC+ N  +Y+ILI  +CK  ++E A  +   M   G+ P  +++NTL
Sbjct: 411 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      ++ A+ LF ++   G +A    +   I        +  A ++F  +     
Sbjct: 471 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 530

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y  L+DG CK+  +  A+     +     +  + T+  ++++L  + ++ +A  
Sbjct: 531 KPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVA 590

Query: 362 LFLDMEAKGVAPDCV 376
           +   M   GV P+ V
Sbjct: 591 IIHIMVRMGVVPEVV 605



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 192/389 (49%), Gaps = 7/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FGC P    Y+ +++ L  T +   A  ++  M++     GV   PDA  +T  I   C 
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSA----GVA--PDARTHTVRIKSFCI 57

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G    A  LL  + ++  +   + Y +V+RG        +A+ LF EM+ + V P+V T
Sbjct: 58  TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+ ++  LC+ G + E+  LL  +++ G+  N F  N  + G C  GR+  A  L  SM+
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           +     +V +Y+ L+ G CK+ +++ A      M+++G  P   TYNT+  G  +   ++
Sbjct: 178 AY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +L  +    G   D   Y + I+GLC  G +  ALELF   +    + D+  Y+ L+
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            GLC+ G +  A ++ + +       D+ TYNI+I+ LC  G +  A  +  D   KG  
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD   FNT++ G  +  +    ++L+ RM
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERM 385



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P    YN+++         ++A ++++ M+  GV P+  T +V +   C  G+   A +L
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  + + G       Y T++ G    G    A+ LF  M       +V +++ +++  C+
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I  + +L +++L +G+     T N    GL E  ++E A  L + M  + +A D   
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVT 186

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GLCK+  + EA +  R +    C  D  +Y+ +IDG CK   L+ A EL     
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + D VTY  +I+ LCA+G +++A +LF + +AK + PD V +N+L+ G  R     
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306

Query: 393 KVVELLHRMDE 403
             +++++ M E
Sbjct: 307 HALQVMNEMVE 317



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 1/281 (0%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P    ++ IMD L      ++A ++   M+  GV P+A  +   +  FC+TGR + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L  S+   GC     +Y  ++ G   +     A  L+ EML + + P V T+N +   
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  +  L  ++ + G++ + +    +I GLC+ G + EA+ L  ++       D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP-D 183

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L+ GLCK  +++ A +    +     I D  TYN +I   C    + +A +L  
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D   KG  PD V + +L+ G     +  + +EL +    ++
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 40/245 (16%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT------------- 237
           M+  GC     +Y+ +++        + A  +Y  MLS G+ P   T             
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 238 ----------------------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                                 Y T+  GL+       A  LFDEM R  V  D   +  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPR 333
            +  LC+ G I+E+  L    ++LK  + +  ++C   I GLC+ GRL+ A  L  S+  
Sbjct: 121 VLHALCQKGDIMESGALLA--KVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-D 177

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             +  DVVTYN ++  LC D K+ +A      M  +G  PD   +NT++ G  + +   +
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 394 VVELL 398
             ELL
Sbjct: 238 ATELL 242


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++ A G  PNV++Y+ +I G CR  +   A  +++EM++ NG       P+AV
Sbjct: 267 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NG-----FTPNAV 320

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++DG  K+G ++ A  +  +MKD NI P   T   +I+G C A  S E + LF + 
Sbjct: 321 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 380

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P  + ++ I+D   K G +  AS +   M ++G+ P+   Y +L+DGFC    +
Sbjct: 381 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 440

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M+  G K ++ +Y  LI+G+CK ++++ A  L +E+   G+ P    YN++
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   ++ VE A  L+ +M   G+  D   Y + IDGL K+G ++ A ++   +     
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D R+++ LI+GLC  G+ + A ++   +    +I  V+ YN +I     +G + +A  
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M  +G+ PD + ++ L+ G
Sbjct: 621 LHDEMLDRGLVPDNITYDILVNG 643



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 218/466 (46%), Gaps = 63/466 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----------INGNG 50
            A  L  ++   G  PN +TYS LI+G C+ G+   A   + EM           +N   
Sbjct: 163 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222

Query: 51  EFGVVCKP---------DAV--------IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           E  + C+          DA+         + T++  LCKEG +++A  L  ++  K I+P
Sbjct: 223 EGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +VV+YN++I G C  ++ N A +++ EM+D G  PN VTF+++MD   K G +E A  + 
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M    + P       ++ G C  GR    ++LF    S G       Y+ +I+G+ K 
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             I  A ++Y EM   GI P+ VTY +L  G  + + ++ A KL ++M+R G+  D  AY
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462

Query: 274 RTFIDGLCK---------------------NGYIV--------------EALELFRTLRI 298
            T IDG CK                     N +I               EA++L++ +  
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+++Y+ LIDGL KSGRL  A ++   +    ++ D   + ++I+ LC  G+ + 
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  +  DM  K + P  + +NTL+ G  +     +   L   M +R
Sbjct: 583 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 628



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 205/478 (42%), Gaps = 91/478 (19%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F + KA G E +   YS  ++ LC   ++  AL+L  EM       G +  P  
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI--PPE 110

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN----PDVVTYNSVIRGFCYANDSNEAKR 116
             +T++I    KEG V +A    L++KD  +N     ++    S+++G+C   +   A  
Sbjct: 111 GTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 166

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------- 163
           L  E+ + G+ PN VT+SV++D  CKNG +E+A +    M   G+R              
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226

Query: 164 ---------------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                                N F +NTL+   C  G++N A  L+  + + G   NV S
Sbjct: 227 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +I G+C+   I  A  +Y EML  G  P  VT+  L  G F+   +E AF +F  M+
Sbjct: 287 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346

Query: 263 -----------------------------------RHGVAADTWAYRTFIDGLCKNGYIV 287
                                                G       Y T IDG  K G I 
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406

Query: 288 EALELFRTLRILKCELDIR----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
            A  ++R +    CE+ I     +Y+ LIDG CK   + +A +L + + R  L  D+  Y
Sbjct: 407 LASNVYREM----CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +I   C    M  AH+L  ++   G++P+   +N+++ G    N   + ++L  +M
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 182/406 (44%), Gaps = 42/406 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++   + L+  + R   T  A  L  +M+       V    D      ++    KEG +
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKML------LVGVTGDCFTLHVMLRACLKEGNI 56

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A++  LQ K + +  D   Y+  +   C   +S  A  L  EM   G  P   TF+ +
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 116

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K G + EA +L + M+  G   N  V  +LM G+C+ G +  A  L   +   G 
Sbjct: 117 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 176

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  +YS+LI+G CKN  IE A   YSEM +KGI+ +V + N++  G  +    + AF 
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-------------------- 296
           +F++    G+ A+ + + T +  LCK G + EA  L+  +                    
Sbjct: 237 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 297 ---------RILKCELD------IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
                    ++ K  LD        +++ L+DG  K G ++ A+ +FH +    ++    
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           T  I+I  LC  G+  +  DLF    ++G  P C+ +NT++ G I+
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 401



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 3/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P       ++  + ++    +A+EL  +M    +  D  T + ++R      +  EA++ 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F++   +GV+ +   +S+ +  LC       A  LL  M   G  P    + +++     
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G V  A  L   M + G   N+   + L+ GYC    +  AL L +E+   G+ P  VT
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ L  G  +   +E+AF+ + EM+  G+ +  ++  + ++G  K      A  +F    
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-- 240

Query: 298 ILKCEL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            L+  L ++ +++ L+  LCK G++  A  L+  +    +  +VV+YN +I   C    +
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + A  ++ +M   G  P+ V F  LM G  +  +      + HRM + N
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 3/312 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P +   N ++      N + EA+ L  +M+  GV  +  T  V++    K G + EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           Q        GV  +   Y+  +   CL      A  L   M + G      +++ +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K   +  AL L  +M++ G    +    +L  G      +  A  L +E+   G+  + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH- 329
             Y   IDG CKNG I +A E +  ++       + S + +++G  K    + A+ +F+ 
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           +L  G  +A+V T+N ++  LC +GKM++A +L+ ++ AKG++P+ V++N ++LG  R +
Sbjct: 241 ALESG--LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298

Query: 390 ETSKVVELLHRM 401
             +   ++   M
Sbjct: 299 NINAACKVYKEM 310


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 202/383 (52%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++  +  FG +P ++TY+TL++  C+ G     L+L  EM          C P+ V
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDV 270

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL K+G  ++AK L+ +M    +     TYN +I G+       EA  L  EM
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V T++  +  LCK G+M +A Q L  M+   + P+   YNTL+ G+C  G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  LF  + S+     + +Y+ L++G C+  E+E A  L  EM+++GI P +VTY  L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +  A + FDEM   G+  D++AY T I G  K G    A  L   +     
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  Y+ ++DGLCK G L+ A EL   +    +I D VTY  +IHA   +G++ K  +
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F +M +KG+ P  V +  L+ G
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHG 593



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 206/406 (50%), Gaps = 29/406 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN-------------GEF 52
           L ++++  GC PN +TY+ LINGL + G    A  L  EM+                G F
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315

Query: 53  --GVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
             G++ +              P    Y + I GLCK G +  A + L  M   N+ PDVV
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           +YN++I G+C   +  +A  LF E+    + P +VT++ ++D LC+ G++E A QL   M
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           I  G+ P+   Y  L++G C  G ++ A+E F  M   G + + ++Y+  I G  K  + 
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A SL  EML+KG  P ++ YN +  GL ++  +E A +L  +M   GV  D   Y + 
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I    +NG + +  E+F  +        + +Y+ LI G    GRL+ A+  F  +    +
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           + +V+TYN +I+ LC   +MD+A++ F +M  KG+ P+  ++  L+
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 181/322 (56%), Gaps = 6/322 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  LF +L++    P ++TY+TL++GLCR G   VA  L  EMIN          PD 
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG------IAPDI 444

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +++G CK G +  A+E   +M  + +  D   Y + I G     D++ A  L  E
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+++ ++V++D LCK G +EEAS+LL+ M+  GV P+   Y +++      GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + + +E+F  M S G   +V +Y++LI+G+     +E A   +SEM  KGI P V+TYN+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ ++++A+  F EM   G+  + ++Y   I+  C  G   EAL L++ +    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 301 CELDIRSYSCLIDGLCKSGRLK 322
            + D  ++S L+  L K  +L+
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQ 706



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 178/352 (50%), Gaps = 2/352 (0%)

Query: 50  GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN 109
           GEFG+  KP  V Y T++D  CK G V +  +LL +M+ +   P+ VTYN +I G     
Sbjct: 226 GEFGI--KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 283

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           +  +AK L  EM+  G++ +  T++ ++      G + EA  L E M+  G  P    YN
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYN 343

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + + G C  GR++ A +    M +     +V SY+ LI GYC+   +  A  L+ E+ S 
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 403

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + PT+VTYNTL  GL    ++E A +L  EM   G+A D   Y   ++G CK G +  A
Sbjct: 404 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 463

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            E F  +     ELD  +Y+  I G  K G    A+ L   +       D++ YN+++  
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC  G +++A +L   M + GV PD V + +++   + N    K  E+ + M
Sbjct: 524 LCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 193/381 (50%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  ++   G  P V TY++ I GLC+ G    A+    +M+  N        PD V
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVV 375

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G C+ G + KA  L  +++   + P +VTYN+++ G C   +   A++L +EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P++VT++++++  CK G +  A +  + M+  G+  +++ Y T + G    G  
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   M + G   ++  Y+++++G CK   +E A  L  +M+S G+ P  VTY ++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  ++ +  ++F EM   G+      Y   I G    G +  A   F  ++    
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LI+GLCK  R+  A+  F  +    +  +  +Y I+I+  C  G   +A  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L+  M  +GV PD    + L+
Sbjct: 676 LYKQMLDRGVQPDSCTHSALL 696



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 176/331 (53%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
            K+  V++   +  +M    ++PDV   N ++R     +  ++A  ++  M + G++P +
Sbjct: 175 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 234

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT++ ++D  CK GK+++   LL  M + G  PN   YN L++G    G   +AK L   
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G K + ++Y+ LI GY     +  ALSL  EM+ KG  PTV TYN+   GL ++ +
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +  A +   +M  + +  D  +Y T I G C+ G +++A  LF  LR +     I +Y+ 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L+DGLC+ G L++A +L   +    +  D+VTY I+++  C  G +  A + F +M  +G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  D  A+ T ++G ++  +TS+   L   M
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEM 505



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 177/363 (48%), Gaps = 6/363 (1%)

Query: 39  LNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           L++F++MI           PD      I+  L  +  + KA E+   M +  I P +VTY
Sbjct: 184 LSVFDKMIKSR------LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTY 237

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+++  +C      +   L  EM  +G  PN VT++V+++ L K G+ E+A  L+  M++
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 297

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++ +A+ YN L+ G+   G +  A  L   M   G    V +Y+  I G CK   +  
Sbjct: 298 TGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+   S+ML+  + P VV+YNTL  G   +  + +AF LFDE++   +      Y T +D
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC+ G +  A +L   +       DI +Y+ L++G CK G L +A E F  +    L  
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D   Y   I      G   +A  L  +M AKG  PD + +N ++ G  +     +  ELL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 399 HRM 401
            +M
Sbjct: 538 QKM 540



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 125/293 (42%), Gaps = 22/293 (7%)

Query: 114 AKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           A RLF     Q G + +   F  I++ L +N  M  A  ++E +I   +     + + L+
Sbjct: 98  ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR---IVDVLI 154

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C++  V+                 V    +LI  Y K   +E  LS++ +M+   + 
Sbjct: 155 GG-CVSSEVS-----------------VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLS 196

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V   N +   L +   + +A +++  M   G+      Y T +D  CK G + + L+L
Sbjct: 197 PDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDL 256

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              ++   C  +  +Y+ LI+GL K G  + A  L   + +  L     TYN +I+    
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFN 316

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G + +A  L  +M  KG +P    +N+ + G  +    S  ++ L  M   N
Sbjct: 317 KGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 219/434 (50%), Gaps = 38/434 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL   +   GC+P+V+TY+ L+  +C++     A+N+ +EM    G     C P+ V
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM-RAKG-----CTPNIV 212

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+G+C+EG VD AKE+L ++      PD+V+Y +V++G C A   ++ K LF EM
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+   PN VTF +++   C+ G +E A Q+L+ M Q G  PN  + N +++  C  GRV
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 332

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +   +M   GC  +  SY+ ++ G C+    E A  L  EM+ K   P  VT+NT 
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 392

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA--------------------------------AD 269
              L +   +E+A KL + M  +G +                                 +
Sbjct: 393 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN 452

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  Y T + GLC    +  A EL   +    C L+  +++ L+   C+ G ++ A EL +
Sbjct: 453 TITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN 512

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +       +++T+N ++  +  D   ++A +L   + +KGV+ D + +++++    R +
Sbjct: 513 QMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 572

Query: 390 ETSKVVELLHRMDE 403
            T + +++LH + +
Sbjct: 573 RTEEAIQMLHAVQD 586



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 194/379 (51%), Gaps = 9/379 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + ++M     + G  C P+  +   
Sbjct: 268 LFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM----SQHG--CTPNTTLCNI 321

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A + L  M     NPD ++Y +V+RG C A     AK L  EM+ + 
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A +L+ELM + G       YN L+ GFC+ GRV+ A 
Sbjct: 382 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 441

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF    ++ C+ N  +Y+ L+ G C  + ++ A  L + M+ K      VT+N L    
Sbjct: 442 ELF---NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFF 498

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   VE A +L ++M  HG   +   + T +DG+ K+    EALEL   L      LD 
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS ++D L +  R + A ++ H++    +   V  YN ++ ALC   + D+A D F  
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 618

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M + G  P+   +  L+ G
Sbjct: 619 MVSNGCMPNESTYIILIEG 637



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 204/439 (46%), Gaps = 47/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L     + G  P+V   + LI  LCR G T  A  +                 D  
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPV------DVF 110

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G C+ G +D A+ L+  M    + PD  TY  +IRG C      +A  L  +M
Sbjct: 111 AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VVT++V+++ +CK+    EA  +L+ M   G  PN   YN +++G C  GRV
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AKE+   + S G + ++ SY+ ++ G C  +  +    L++EM+ K   P  VT++ L
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 287

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    VERA ++  +M +HG   +T      I+ +CK G + +A +    + +  C
Sbjct: 288 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 347

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--------------------GVL----- 336
             D  SY+ ++ GLC++GR + A EL   + R                    G++     
Sbjct: 348 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 407

Query: 337 ----------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                        +VTYN ++H  C  G++D A +LF ++  +   P+ + + TL+ G  
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLC 464

Query: 387 RNNETSKVVELLHRMDERN 405
                    ELL  M +++
Sbjct: 465 HAERLDAAAELLAGMIQKD 483



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 38/339 (11%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           +R     +D  EA RL      +G  P+V   + ++  LC+ G+  +A+++L      G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
             + F YNTL+ G+C  GR++ A+ L  SM       + ++Y+ +I G C    +  AL+
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  +ML +G +P+VVTY  L   + +      A  + DEM+  G   +   Y   I+G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           + G + +A E+   L     + DI SY+ ++ GLC + R      LF  +     + + V
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 342 TY-----------------------------------NIMIHALCADGKMDKAHDLFLDM 366
           T+                                   NI+I+A+C  G++D A+D   +M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              G  PD +++ T++ G  R        ELL  M  +N
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 135/269 (50%), Gaps = 9/269 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +  +GC   ++TY+ L++G C  G    AL LF  +          C+P+ +
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---------PCEPNTI 454

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ GLC    +D A ELL  M  K+   + VT+N ++  FC      EA  L  +M
Sbjct: 455 TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++TF+ ++D + K+   EEA +LL  ++  GV  +   Y++++D      R 
Sbjct: 515 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 574

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++  +++ MG +  V  Y+ ++   CK  E + A+  ++ M+S G  P   TY  L
Sbjct: 575 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             GL     ++ A  +  E+   GV + +
Sbjct: 635 IEGLAHEGLLKEARYVLSELYAKGVLSKS 663


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 219/436 (50%), Gaps = 41/436 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G   NV T + ++N LC+ G  +  +  F   +   G +     PD V 
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVY-----PDIVT 272

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I     +G +++A EL+  M  K  +P V TYN+VI G C       AK +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T+  ++ E CK G + E  ++   M    V P+   ++++M  F  +G ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A   F S++  G   +   Y+ILI GYC+   I  A++L +EML +G    VVTYNT+ 
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A KLF+EM    +  D++     IDG CK G +  A+ELF+ ++  +  
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD+ +Y+ L+DG  K G +  A E++  +    ++   ++Y+I+++ALC+ G + +A  +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572

Query: 363 FLDMEAK-----------------------------------GVAPDCVAFNTLMLGCIR 387
           + +M +K                                   G  PDC+++NTL+ G +R
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632

Query: 388 NNETSKVVELLHRMDE 403
               SK   L+ +M+E
Sbjct: 633 EENMSKAFGLVKKMEE 648



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 202/405 (49%), Gaps = 8/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G  P V TY+T+INGLC+ G    A  +F EM+           PD+ 
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 341

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++   CK+G V + +++   M+ +++ PD+V ++S++  F  + + ++A   F  +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+ V +++++   C+ G +  A  L   M+Q G   +   YNT++ G C    +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M       + ++ +ILI+G+CK   ++ A+ L+ +M  K I+  VVTYNTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  ++ A +++ +M    +     +Y   ++ LC  G++ EA  ++  +     
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  +   + +I G C+SG           +     + D ++YN +I+    +  M KA  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 362 LFLDMEAK--GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME +  G+ PD   +N+++ G  R N+  +   +L +M ER
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 8/376 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   +F+ +++    P+++ +S++++   R+G+   AL  F    N   E G++  PD 
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 410

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VIYT +I G C++G +  A  L  +M  +    DVVTYN+++ G C      EA +LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + P+  T ++++D  CK G ++ A +L + M +  +R +   YNTL+DGF   G 
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ AKE++  M S        SYSIL+N  C    +  A  ++ EM+SK IKPTV+  N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G              ++M   G   D  +Y T I G  +   + +A  L + +   +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650

Query: 301 CEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L  D+ +Y+ ++ G C+  ++K A  +   +    +  D  TY  MI+   +   + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710

Query: 359 AHDLFLDMEAKGVAPD 374
           A  +  +M  +G +PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 151/307 (49%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           ++ +IR +  A    EA   F  +  +G   ++   + ++  L + G +E A  + + + 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV  N +  N +++  C  G++ +       ++  G   ++ +Y+ LI+ Y     +E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L + M  KG  P V TYNT+  GL +  + ERA ++F EM R G++ D+  YR+ +
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
              CK G +VE  ++F  +R      D+  +S ++    +SG L  A   F+S+    LI
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D V Y I+I   C  G +  A +L  +M  +G A D V +NT++ G  +     +  +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 398 LHRMDER 404
            + M ER
Sbjct: 468 FNEMTER 474


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 194/390 (49%), Gaps = 6/390 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E +  T  TLI GLC  G T  AL + +EM+         C PD V YT +++  CK   
Sbjct: 157 ERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSG 210

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A +LL +M+DK   PD+VTYN V+ G C     ++A      +   G +PN V++++
Sbjct: 211 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 270

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   + E+A +L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N  SY+ L++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +V+ A 
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +++  G A    +Y T IDGL K G   EALEL   +     + DI +YS +  GL
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M   G  P+ 
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 510

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  L+ G        +  +LL  +  R 
Sbjct: 511 STYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 196/368 (53%), Gaps = 6/368 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  ++    C P+V+TY+ L+   C+      A+ L +EM +        C PD V 
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVT 232

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++G+C+EG VD A E L  +      P+ V+YN V++G C A    +A+ L  EM 
Sbjct: 233 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 292

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVVTF++++  LC+ G +E A ++LE + + G  PN+  YN L+  FC   +++
Sbjct: 293 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMD 352

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A      M S GC  ++ SY+ L+   C++ E++ A+ L  ++  KG  P +++YNT+ 
Sbjct: 353 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 412

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + + A +L +EM   G+  D   Y T   GLC+   I +A+  F  ++ +   
Sbjct: 413 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 472

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   Y+ +I GLCK      A +LF  +     + +  TY I+I  L  +G + +A DL
Sbjct: 473 PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 532

Query: 363 FLDMEAKG 370
             ++ ++G
Sbjct: 533 LDELCSRG 540



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 20/409 (4%)

Query: 4   AALFTKLKAFG-----------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF 52
           AAL  KL A G           C P+V+ Y+ ++ G C  G    A     E        
Sbjct: 102 AALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAGQVDAARRWCAER------- 154

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
               + DA    T+I GLC  G    A  +L +M  +   PDVVTY  ++   C  +   
Sbjct: 155 --AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 212

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A +L  EM D+G  P++VT++V+++ +C+ G++++A + L+ +   G  PN   YN ++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   R   A+EL   M   GC  NV ++++LI+  C+   +E AL +  ++   G  
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN L     +  ++++A    D M   G   D  +Y T +  LC++G +  A+EL
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L+   C   + SY+ +IDGL K+G+ K A EL + +    L  D++TY+ +   LC 
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +++ A   F  ++  G+ P+ V +N ++LG  +  ET   ++L   M
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 501



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 191/388 (49%), Gaps = 14/388 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+  T + LI  L  +G T  A  +              C PD + Y  ++ G C  G 
Sbjct: 95  RPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMMAGYCGAGQ 143

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VD A+       ++ +  D  T +++IRG C    +  A  +  EM+ +   P+VVT+++
Sbjct: 144 VDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 200

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  CK    ++A +LL+ M   G  P+   YN +++G C  GRV+ A E   ++ S G
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ N  SY+I++ G C  +  E A  L  EM  KG  P VVT+N L   L     VE A 
Sbjct: 261 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 320

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ +++ ++G + ++ +Y   +   CK   + +A+     +    C  DI SY+ L+  L
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+SG + +A EL H L        +++YN +I  L   GK  +A +L  +M +KG+ PD 
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++T+  G  R +     +    ++ +
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQD 468



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 266

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A+EL+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM++A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 327 PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 386

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++P ++TY+T+
Sbjct: 387 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +    C
Sbjct: 447 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 506

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             +  +Y+ LI+GL   G +K A +L   L
Sbjct: 507 MPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 14/337 (4%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G +D+A  L+   +     PD  T  ++I+    +  + EA+R+          P+
Sbjct: 77  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVL-----AACGPD 127

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V+ ++ +M   C  G+++ A +      +  V  +A+  +TL+ G C  GR   A  +  
Sbjct: 128 VMAYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANALAVLD 184

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M    C  +V +Y+IL+   CK    + A+ L  EM  KG  P +VTYN +  G+ +  
Sbjct: 185 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 244

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A +    +  +G   +T +Y   + GLC      +A EL   +    C  ++ +++
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD-MEA 368
            LI  LC+ G ++ A E+   +P+     + ++YN ++HA C   KMDKA   FLD M +
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAM-AFLDLMVS 363

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +G  PD V++NTL+    R+ E    VELLH++ ++ 
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 6/194 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A    + + GC P++++Y+TL+  LCR+G   VA+ L  ++ +        C P  +
Sbjct: 353 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG------CAPVLI 406

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGL K G   +A ELL +M  K + PD++TY+++  G C  +   +A R F ++
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G++PN V ++ I+  LCK  +   A  L   MI  G  PN   Y  L++G    G +
Sbjct: 467 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 526

Query: 182 NRAKELFVSMESMG 195
             A++L   + S G
Sbjct: 527 KEARDLLDELCSRG 540


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 8/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++K  G E +++ Y++LI G C  G       LF+E++           P A+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS------PCAI 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK G + +A E+   M ++ + P+V TY  +I G C    + EA +L   M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++  +PN VT+++I+++LCK+G + +A +++ELM +   RP+   YN L+ G C  G +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 182 NRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + A +L   M  +S     +V SY+ LI+G CK   +  AL +Y  ++ K      VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +   V +A +L+ ++    +  ++  Y   IDG CK G +  A  L   +R+ 
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +  +  Y+CL+  LCK G L  AW LF  + R     DVV++NIMI      G +  A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
             L + M   G++PD   ++ L+
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLI 606



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 211/437 (48%), Gaps = 43/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  +++     P+V +Y+T+I G C       AL L  EM  G+G     C    V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D+A   L +MK   +  D+V Y S+IRGFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +T++ ++   CK G+++EAS++ E MI+ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M     + N  +Y+I+IN  CK+  +  A+ +   M  +  +P  +TYN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
             GL     ++ A KL   M +       D  +Y   I GLCK                 
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 284 -------------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                              G + +A+EL++ +   K   +  +Y+ +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +    L   V  YN ++ +LC +G +D+A  LF +M+     PD V+FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 385 CIRNNETSKVVELLHRM 401
            ++  +      LL  M
Sbjct: 574 SLKAGDIKSAESLLVGM 590



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 186/343 (54%), Gaps = 2/343 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++ GLC+     KA  LL +M+  ++ PDV +YN+VIRGFC   +  +A  L  EM 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   ++VT+ +++D  CK GKM+EA   L+ M  +G+  +  VY +L+ GFC  G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R K LF  +   G      +Y+ LI G+CK  +++ A  ++  M+ +G++P V TY  L 
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + + + A +L + M       +   Y   I+ LCK+G + +A+E+   ++  +  
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAH 360
            D  +Y+ L+ GLC  G L  A +L + + +       DV++YN +IH LC + ++ +A 
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D++  +  K  A D V  N L+   ++  + +K +EL  ++ +
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 198/406 (48%), Gaps = 43/406 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F  +   G  PNV TY+ LI+GLC  G T  AL L   MI  + E      P+AV
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAV 353

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+ LCK+G V  A E++  MK +   PD +TYN ++ G C   D +EA +L   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +       P+V++++ ++  LCK  ++ +A  + +L+++     +    N L++     G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            VN+A EL+  +       N  +Y+ +I+G+CK   +  A  L  +M    ++P+V  YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L +   +++A++LF+EMQR     D  ++   IDG  K G               
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG--------------- 578

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               DI+S   L+ G+ ++G                L  D+ TY+ +I+     G +D+A
Sbjct: 579 ----DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEA 618

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              F  M   G  PD    ++++  CI   ET K+ EL+ ++ +++
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 164/313 (52%), Gaps = 2/313 (0%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +V  +N +++G C   +  +A  L  EM    + P+V +++ ++   C+  ++E+A +L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M   G   +   +  L+D FC  G+++ A      M+ MG + ++  Y+ LI G+C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            E++   +L+ E+L +G  P  +TYNTL  G  ++ Q++ A ++F+ M   GV  + + Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              IDGLC  G   EAL+L   +     E +  +Y+ +I+ LCK G +  A E+   + +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDM--EAKGVAPDCVAFNTLMLGCIRNNET 391
                D +TYNI++  LCA G +D+A  L   M  ++    PD +++N L+ G  + N  
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 392 SKVVELLHRMDER 404
            + +++   + E+
Sbjct: 441 HQALDIYDLLVEK 453



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 35/338 (10%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N+++     + +   A   + +M++     N V+ S +++   +  K   A  +L LM++
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G   N + +N L+ G C      +A  L   M       +VFSY+ +I G+C+ KE+E 
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 219 ALSLYSEMLSKGIKPTVVT-----------------------------------YNTLFI 243
           AL L +EM   G   ++VT                                   Y +L  
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +  +++R   LFDE+   G +     Y T I G CK G + EA E+F  +       
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++ +Y+ LIDGLC  G+ K A +L + +       + VTYNI+I+ LC DG +  A ++ 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             M+ +   PD + +N L+ G     +  +  +LL+ M
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 4/318 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +K     P+ ITY+ L+ GLC  G    A  L   M+  +        PD +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVI 425

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLCKE  + +A ++   + +K    D VT N ++     A D N+A  L+ ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D  +  N  T++ ++D  CK G +  A  LL  M    ++P+ F YN L+   C  G +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF  M+      +V S++I+I+G  K  +I+ A SL   M   G+ P + TY+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++  ++ A   FD+M   G   D     + +      G   +  EL + L     
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665

Query: 302 ELDIRSYSCLIDGLCKSG 319
            LD      ++D +C S 
Sbjct: 666 VLDKELTCTVMDYMCNSS 683



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 7/308 (2%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQP-NVVTFS--VIMDELCKNGKMEEASQLLELMIQ 158
           +R  C   DSN   +  + +  Q V   + + F+   +M +L ++   E A      M++
Sbjct: 43  LRSLC--EDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLE 100

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                N    + L++ +    +   A  +   M   G   NV++++IL+ G C+N E   
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL  EM    + P V +YNT+  G  E  ++E+A +L +EM+  G +     +   ID
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
             CK G + EA+   + ++ +  E D+  Y+ LI G C  G L     LF   L RG   
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              +TYN +I   C  G++ +A ++F  M  +GV P+   +  L+ G     +T + ++L
Sbjct: 281 C-AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 398 LHRMDERN 405
           L+ M E++
Sbjct: 340 LNLMIEKD 347



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   G  P++ TYS LIN   + G+   A++ F++M++   E      PDA I
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE------PDAHI 636

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-AKRLF 118
             +++     +G  DK  EL+ ++ DK+I  D     +V+   C ++ + + AKRL 
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++ A G  PNV++Y+ +I G CR  +   A  +++EM++ NG       P+AV
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NG-----FTPNAV 438

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++DG  K+G ++ A  +  +MKD NI P   T   +I+G C A  S E + LF + 
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 498

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P  + ++ I+D   K G +  AS +   M ++G+ P+   Y +L+DGFC    +
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M+  G K ++ +Y  LI+G+CK ++++ A  L +E+   G+ P    YN++
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   ++ VE A  L+ +M   G+  D   Y + IDGL K+G ++ A ++   +     
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D R+++ LI+GLC  G+ + A ++   +    +I  V+ YN +I     +G + +A  
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M  +G+ PD + ++ L+ G
Sbjct: 739 LHDEMLDRGLVPDNITYDILVNG 761



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 218/465 (46%), Gaps = 63/465 (13%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----------INGNGE 51
           A  L  ++   G  PN +TYS LI+G C+ G+   A   + EM           +N   E
Sbjct: 282 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILE 341

Query: 52  FGVVCKP---------DAV--------IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
             + C+          DA+         + T++  LCKEG +++A  L  ++  K I+P+
Sbjct: 342 GYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 401

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           VV+YN++I G C  ++ N A +++ EM+D G  PN VTF+++MD   K G +E A  +  
Sbjct: 402 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 461

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M    + P       ++ G C  GR    ++LF    S G       Y+ +I+G+ K  
Sbjct: 462 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 521

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            I  A ++Y EM   GI P+ VTY +L  G  + + ++ A KL ++M+R G+  D  AY 
Sbjct: 522 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 581

Query: 275 TFIDGLCK---------------------NGYIV--------------EALELFRTLRIL 299
           T IDG CK                     N +I               EA++L++ +   
Sbjct: 582 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 641

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+++Y+ LIDGL KSGRL  A ++   +    ++ D   + ++I+ LC  G+ + A
Sbjct: 642 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 701

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  DM  K + P  + +NTL+ G  +     +   L   M +R
Sbjct: 702 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDR 746



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 205/478 (42%), Gaps = 91/478 (19%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F + KA G E +   YS  ++ LC   ++  AL+L  EM       G +  P  
Sbjct: 175 LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI--PPE 228

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN----PDVVTYNSVIRGFCYANDSNEAKR 116
             +T++I    KEG V +A    L++KD  +N     ++    S+++G+C   +   A  
Sbjct: 229 GTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------- 163
           L  E+ + G+ PN VT+SV++D  CKNG +E+A +    M   G+R              
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344

Query: 164 ---------------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                                N F +NTL+   C  G++N A  L+  + + G   NV S
Sbjct: 345 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 404

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +I G+C+   I  A  +Y EML  G  P  VT+  L  G F+   +E AF +F  M+
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 263 -----------------------------------RHGVAADTWAYRTFIDGLCKNGYIV 287
                                                G       Y T IDG  K G I 
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 524

Query: 288 EALELFRTLRILKCELDIR----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
            A  ++R +    CE+ I     +Y+ LIDG CK   + +A +L + + R  L  D+  Y
Sbjct: 525 LASNVYREM----CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 580

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +I   C    M  AH+L  ++   G++P+   +N+++ G    N   + ++L  +M
Sbjct: 581 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 36/351 (10%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +EG + +A++  LQ K + +  D   Y+  +   C   +S  A  L  EM   G  P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           TF+ ++    K G + EA +L + M+  G   N  V  +LM G+C+ G +  A  L   +
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   N  +YS+LI+G CKN  IE A   YSEM +KGI+ +V + N++  G  +    
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--------------- 296
           + AF +F++    G+ A+ + + T +  LCK G + EA  L+  +               
Sbjct: 350 QNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 297 --------------RILKCELD------IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
                         ++ K  LD        +++ L+DG  K G ++ A+ +FH +    +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           +    T  I+I  LC  G+  +  DLF    ++G  P C+ +NT++ G I+
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 519



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 3/294 (1%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA++ F++   +GV+ +   +S+ +  LC       A  LL  M   G  P    + +++
Sbjct: 176 EAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVI 235

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                 G V  A  L   M + G   N+   + L+ GYC    +  AL L +E+   G+ 
Sbjct: 236 TACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLV 295

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  VTY+ L  G  +   +E+AF+ + EM+  G+ +  ++  + ++G  K      A  +
Sbjct: 296 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355

Query: 293 FRTLRILKCEL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           F     L+  L ++ +++ L+  LCK G++  A  L+  +    +  +VV+YN +I   C
Sbjct: 356 FND--ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               ++ A  ++ +M   G  P+ V F  LM G  +  +      + HRM + N
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 467


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N+ TY+TLIN  C  G    A      ++           PD+  YT+ + G C+ G   
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAG------LAPDSHAYTSFVLGYCRTGLFA 126

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  L L M  +       TY ++++G C A    EA  +F  M   G  P+   +S+++
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMV 186

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC  G+  EA  LL   +  G  PN  VYN L+DG+C TG +  A ++F  M+S GC 
Sbjct: 187 HGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL 246

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI G+CK+ ++E A+ LYS M+  G+ P VVTY TL  G      +E AF+L
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRL 306

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
              M+  G+A + W     ID LCK+G I EA +   +L     +++   Y+ +ID LCK
Sbjct: 307 LHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCK 366

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           SG+   A  L   +     + D   Y+ +I  LC + K+ +A  L  DM   GV  + V 
Sbjct: 367 SGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426

Query: 378 FNTLM 382
           F  L+
Sbjct: 427 FTILI 431



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 183/383 (47%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  +   GC     TY+ L+ GLC  G    A+ +F  M          C PD+ 
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDG------CAPDSH 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ ++ GLC  G   +A  LL     K   P+V  YN++I G+C   D   A  +F  M
Sbjct: 181 VYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNV T++ ++   CK+GK+E A  L   MI+ G+ PN   Y TL+ G C  G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L  SME+ G   N ++  +LI+  CK+  IE A      ++ KGIK   V Y ++
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSM 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  + + A  L  ++   G   D   Y + IDGLC+   ++EA+ L   +     
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +   ++ LID   +  R      +   +    +  DVVTY + I + C DG+M+ A  
Sbjct: 421 QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAES 480

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           + + M   GV P+   +NTL+ G
Sbjct: 481 MMIQMIDHGVRPNLTTYNTLIKG 503



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 202/455 (44%), Gaps = 57/455 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL T     G  PNV  Y+ LI+G C TG   +A+++F+ M +        C P+  
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG------CLPNVR 250

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G CK G V++A  L  +M +  + P+VVTY ++I+G C       A RL   M
Sbjct: 251 TYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN  T  V++D LCK+G++EEA Q L  ++Q G++ N  +Y +++D  C +G+ 
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-------------- 227
           + A  L   + + G   +   YS LI+G C+  ++  A+SL ++M+              
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430

Query: 228 ---------------------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                + G+KP VVTY        +  ++E A  +  +M  HGV
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR------ 320
             +   Y T I G    G + +A    + +    C+ +  SY+ L+  L K         
Sbjct: 491 RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550

Query: 321 ----------LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
                     +K+  EL   + +    +    Y+  I  L    ++++A    + M++  
Sbjct: 551 DSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN 610

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + P    +  ++  C R     + +  L  M +RN
Sbjct: 611 LTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRN 645



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 186/460 (40%), Gaps = 80/460 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
            A  L++++   G  PNV+TY+TLI G C  GH   A  L   M               I
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +   + G +               K + VIYT++ID LCK G  D A  L+ ++  +   
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD   Y+S+I G C  N   EA  L  +M++ GVQ N V F++++D+  +  + +    +
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M   GV+P+   Y   +  +C  GR+  A+ + + M   G + N+ +Y+ LI GY  
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLF----------------IGLFEIHQVERAFK 256
              +  A S    M+  G KP   +Y  L                 I L++I  ++   +
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEE 566

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA----------------------LELFR 294
           L +E+ +   ++ ++ Y  FI  L K   + EA                      +E   
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 295 TLRILKCELD-------------IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
            +++LK  L              + SY  +I  LC+ G    A  +F  +       D +
Sbjct: 627 RMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEI 686

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
            + I+I  L   G       L   ME +   P    ++ L
Sbjct: 687 AWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 4/275 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +   + ++  L ++G +   S +  L  ++ VR N   Y TL++ +C  G +  AK  
Sbjct: 41  PPIRCLNTLLMALARHGML---SDMESLAARMPVR-NLHTYTTLINAYCHAGDLPAAKRH 96

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
             S+   G   +  +Y+  + GYC+      A  L+  M  +G   T  TY  L  GL  
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              V  A  +F  M   G A D+  Y   + GLC  G   EA+ L           ++  
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LIDG C +G L++A ++F  +     + +V TY  +I   C  GK+++A  L+  M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             G+AP+ V + TL+ G            LLH M+
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 3/220 (1%)

Query: 187 LFVSMESMGCK---HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           +   MES+  +    N+ +Y+ LIN YC   ++  A    S +L  G+ P    Y +  +
Sbjct: 58  MLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVL 117

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G         A +LF  M + G A   + Y   + GLC  G + EA+ +F  +    C  
Sbjct: 118 GYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAP 177

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D   YS ++ GLC +GR   A  L         + +V  YN +I   C+ G ++ A D+F
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF 237

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             M++KG  P+   +  L+ G  ++ +  + + L  RM E
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIE 277



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%)

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY TL         +  A +    + R G+A D+ AY +F+ G C+ G    A  LF  +
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C     +Y+ L+ GLC +G ++ A  +F  +       D   Y+IM+H LC  G+ 
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +A  L  D   KG  P+   +N L+ G     +    +++   M  +
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSK 243



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P   +YT +I+   +   + +A   L  M  +N  P + +Y  +I   C     + AK +
Sbjct: 613 PSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSI 672

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++ +    + + + +++D L + G   + S+LL  M +   RP + +Y+ L     +
Sbjct: 673 FGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITV 732

Query: 178 TGRVN 182
           T    
Sbjct: 733 TSEAQ 737



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 6/147 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +    +++    P+   Y+ +I    R      AL   + M+  N        P   
Sbjct: 598 EAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRN------YLPRLE 651

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II  LC+EG    AK +   +  K  N D + +  +I G     ++ +  RL   M
Sbjct: 652 SYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFM 711

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEE 148
            +Q  +P    +S +  E+    + +E
Sbjct: 712 EEQNCRPGSAIYSRLTGEITVTSEAQE 738


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 202/411 (49%), Gaps = 29/411 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  +  ++K+ G  P+V +YS LIN  C  G  +  L+L EEM +   +  +V      
Sbjct: 409 EALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLI 468

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  CK D+ +Y T+IDG C +G +D A +LL +M    + 
Sbjct: 469 HGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELV 528

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   +  S+IRG+      ++A  +F  M+  G+ P+ +  + I+D  C+ G  +EA  L
Sbjct: 529 PTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTL 588

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           LE   + G   N   YN ++   C  G   RA EL   M       +V +YS LI+G+ K
Sbjct: 589 LEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAK 648

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               + A++L++ M+  GI   + TY  L       H++  A+ +F EM+  G+  D  +
Sbjct: 649 QSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQIS 708

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I G C N  + +A  LF  +    C  ++ +Y+C+IDG CKS R+ +A  +F  + 
Sbjct: 709 YTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMN 768

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           R  +I DVVTY ++I      G  D+AH L+  M+ KGV PD +  N L L
Sbjct: 769 RDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGL 819



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 208/438 (47%), Gaps = 47/438 (10%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCR-----TGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +F +LK  G  PN+ TY+ ++N  C       G    A+ L +  I  +GE     KP  
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGK--IYRSGE-----KPTV 356

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T I GLCK G V+ A  L+  +   N   +  ++N VI GFC   +  EA ++  E
Sbjct: 357 VTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEE 416

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+V ++S++++  C  G + +   L+E M    ++P+   Y +L+ G C    
Sbjct: 417 MKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNM 476

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A ++F S+ +  CK++   Y  LI+G+C   +++ A+ L  EM+   + PT  +  +
Sbjct: 477 LQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRS 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G +++   ++A ++F+ M R G+  DT A    +DG C+ GY  EAL L    +   
Sbjct: 537 LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHG 596

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIA--------------------- 338
             L+  SY+ +I  LCK G  + A EL    L R VL +                     
Sbjct: 597 FNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAV 656

Query: 339 -------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                        ++ TY I++       KM +A+ +F +M+ +G+  D +++ TL++G 
Sbjct: 657 NLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGF 716

Query: 386 IRNNETSKVVELLHRMDE 403
             N E  K   L   M  
Sbjct: 717 CNNREMKKAWALFEEMSR 734



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 160/349 (45%), Gaps = 4/349 (1%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V++  +I        ++ A ++    K   + PD+ T N +++    AN     +R+F 
Sbjct: 247 GVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFE 306

Query: 120 EMMDQGVQPNVVTFSVIMDELCK----NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           E+ D+G  PN+ T++++M+  C     +  M +A+ +L  + + G +P    Y+T + G 
Sbjct: 307 ELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGL 366

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V  A  L  ++       N  S++ +I G+CK  E+  AL +  EM S GI P V
Sbjct: 367 CKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDV 426

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            +Y+ L         V +   L +EM+   +     +Y + I GLCK   +  A+++F +
Sbjct: 427 YSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHS 486

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C+ D   Y  LIDG C  G +  A +L   +    L+    +   +I      G 
Sbjct: 487 IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGL 546

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D+A ++F  M   G+ PD +A N ++ G  R     + + LL    E 
Sbjct: 547 FDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEH 595



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 8/355 (2%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +PD      ++  L +   V+  + +  ++KD+  +P++ TY  ++  +C     +   R
Sbjct: 279 EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMR 338

Query: 117 ----LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
               +  ++   G +P VVT+S  +  LCK G +E A  L+  +       N+  +N ++
Sbjct: 339 QAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVI 398

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            GFC  G V  A ++   M+S G   +V+SYSILIN +C   ++   L L  EM    IK
Sbjct: 399 YGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIK 458

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P++V+Y +L  GL + + ++ A  +F  +       D+  Y T IDG C  G +  A++L
Sbjct: 459 PSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL 518

Query: 293 FRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
              +  +  EL   ++SC  LI G  K G    A E+F+++ R  +  D +  N ++   
Sbjct: 519 LEEM--ICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           C  G   +A  L  D +  G   +  ++N ++    +     + +ELL RM +RN
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN 631



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 15/310 (4%)

Query: 102 IRGFCYANDSNEAK----RLFIEMMD--QGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           I GFC     NEAK     LF   +D  Q V+ + V F V++     N  +E A  +   
Sbjct: 218 IVGFC-----NEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSN 272

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
              +G+ P+    N L+       RV   + +F  ++  G   N+++Y+I++N YC +  
Sbjct: 273 AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVG 332

Query: 216 IEGALSLYSEMLSK----GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +  +   + +L K    G KPTVVTY+T   GL ++  VE A  L   +       ++ 
Sbjct: 333 CDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSH 392

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           ++   I G CK G + EAL++   ++      D+ SYS LI+  C  G +    +L   +
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +   +V+Y  +IH LC    +  A D+F  + A     D   + TL+ G     + 
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 392 SKVVELLHRM 401
              ++LL  M
Sbjct: 513 DSAIKLLEEM 522


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 205/403 (50%), Gaps = 12/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC---KP 58
           +A  +F ++      PN ITY+T+I+G  + G       L ++M         VC   KP
Sbjct: 33  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM---------VCHGLKP 83

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A+ Y  ++ GLC+ G + +   LL +M  + + PD  TY+ +  G     DS     LF
Sbjct: 84  NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 143

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            + +  GV     T S++++ LCK+GK+  A ++L+ ++  G+ P   +YNTL++G+C T
Sbjct: 144 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 203

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +  A   F  M+S   K +  +Y+ LING CK + I  A  L  EM   G+ PTV T+
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL        Q+E+ F +  EMQ +G+  +  +Y + ++  CKNG I EA+ +   +  
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                + + Y+ +ID   + G    A+ L   +    +   +VTYN++I  LC   ++ +
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 383

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A ++   +    + PD V++NTL+  C       K ++L  RM
Sbjct: 384 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF K    G      T S L+NGLC+ G   +A  + + ++N     G+V  P  VIY 
Sbjct: 141 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 194

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G C+ G ++ A     QMK ++I PD +TYN++I G C A     A+ L +EM D 
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V TF+ ++D   + G++E+   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P++VTYN L  G
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +AL+L + +     +  
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y  LI GL  +GRL     L+  + +  ++     +NIM+ A    G   KA DL  
Sbjct: 435 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 494

Query: 365 DMEAK 369
           +M  K
Sbjct: 495 EMLQK 499



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 196/385 (50%), Gaps = 6/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN  +Y+ +I G+ R G    A+ +F+EM     E  V+  P+ + Y T+IDG  K G +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMT----ERAVL--PNHITYNTMIDGHIKGGDL 66

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +    L  QM    + P+ +TYN ++ G C A    E   L  EM  Q + P+  T+S++
Sbjct: 67  EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 126

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
            D L +NG  +    L    ++ GV    +  + L++G C  G+V+ A+E+  S+ + G 
Sbjct: 127 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 186

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                 Y+ LINGYC+  E+EGA S + +M S+ IKP  +TYN L  GL +  ++  A  
Sbjct: 187 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 246

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  EMQ +GV      + T ID   + G + +   +   ++    + ++ SY  +++  C
Sbjct: 247 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G++  A  +   +    ++ +   YN +I A    G  D+A  L   M++ G++P  V
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 366

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +N L+ G    ++ S+  E+++ +
Sbjct: 367 TYNLLIKGLCNQSQISEAEEIINSL 391



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG-VVCKPDA 60
           E +AL  ++ +    P+  TYS L +GL R G +   L+LF + +      G   C    
Sbjct: 103 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC---- 158

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +++GLCK+G V  A+E+L  + +  + P  V YN++I G+C   +   A   F +
Sbjct: 159 ---SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 215

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++P+ +T++ +++ LCK  ++  A  LL  M   GV P    +NTL+D +  TG+
Sbjct: 216 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P    YN 
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   +
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY+ LI   C  G +  A +L   + +  + + V TY+ +I  L   G++++  
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+  M    V P     N ++
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMV 477



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 6/294 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F ++K+   +P+ ITY+ LINGLC+      A +L  EM + NG       P    
Sbjct: 209 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD-NG-----VNPTVET 262

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+ID   + G ++K   +L +M++  + P+VV+Y S++  FC      EA  +  +M 
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V PN   ++ I+D   ++G  ++A  L+E M   G+ P+   YN L+ G C   +++
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E+  S+ +     +  SY+ LI+  C    I+ AL L   M   GIK TV TY+ L 
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            GL    ++     L+ +M ++ V      +   ++   K G  ++A +L + +
Sbjct: 443 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 138/281 (49%)

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    PN  +++V++  + + G+  +A ++ + M +  V PN   YNT++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L   M   G K N  +Y++L++G C+   +    +L  EM S+ + P   TY+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL      +    LF +  ++GV    +     ++GLCK+G +  A E+ ++L      
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                Y+ LI+G C++G L+ A+  F  +    +  D +TYN +I+ LC   ++  A DL
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            ++M+  GV P    FNTL+    R  +  K   +L  M E
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE 288



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 2/208 (0%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N FSY+++I G  +      A+ ++ EM  + + P  +TYNT+  G  +   +E  F+L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           D+M  HG+  +   Y   + GLC+ G + E   L   +   K   D  +YS L DGL ++
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 319 GRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           G  K    LF   L  GV I D  T +I+++ LC DGK+  A ++   +   G+ P  V 
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
           +NTL+ G  +  E         +M  R+
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRH 220



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+K+ G  P+++TY+ LI GLC       A    EE+IN      ++  PDAV
Sbjct: 348 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLI--PDAV 401

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I   C  G +DKA +L  +M    I   V TY+ +I G   A   NE + L+ +M
Sbjct: 402 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M   V P+    +++++   K G   +A  L + M+Q
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 10/365 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY  L+   C  G    A++L  EM    G       P   +Y   +  LCK G V +A 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVPEAM 74

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E++  MKD    PDVVT+N++I G C A   +EA+++  EM   G   N+VT++ +++ L
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHN 199
              G+  EA  +++ M      P+   YN ++ GFC +G ++RA      M +  GC  +
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            F+YSILING CK+  +  A  L  EM+  K    +VV +NTL  G  +   ++RA +L 
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M  HG A D   Y T IDGLC+ G + +   L   +    C+ D+ +Y+ L+ GLCK+
Sbjct: 252 SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKA 311

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G++  A  L   +       + VTY+++   LC   K+D A+DL   +  KG   D VAF
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371

Query: 379 NTLML 383
             L+L
Sbjct: 372 EALLL 376



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 179/336 (53%), Gaps = 11/336 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P    Y+  ++ LC++G    A+ + + M +G       CKPD V + T+I GLCK 
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG------ACKPDVVTFNTLIAGLCKA 102

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A+++L +M+      ++VTYN++I G   A  S EA    + M      P+  T+
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTY 159

Query: 134 SVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM- 191
           + I+   CK+G+++ A   LE M Q  G  P+ F Y+ L++G C +  + +A EL   M 
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
               C  +V +++ L++GYCK ++++ A  L S ML  G  P VVTY+T+  GL     V
Sbjct: 220 GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           ++ F L ++M   G   D   Y   + GLCK G +VEA  L + +    C  +  +YS +
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLV 339

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
            DGLCK  +L +A +L  S+     I DVV +  ++
Sbjct: 340 FDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 163/299 (54%), Gaps = 13/299 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +K   C+P+V+T++TLI GLC+ G    A  + +EM      F      + V
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG--FAA----NLV 125

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+GL   G   ++ E +L M+     PD  TYN++I GFC + + + A   F+E 
Sbjct: 126 TYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYG-FLEE 181

Query: 122 MDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLT 178
           M Q  G  P+  T+S++++ LCK+  + +A +LL+ MI +     +   +NTL+DG+C  
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKA 241

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             ++RA+EL  SM   GC  +V +YS +I+G C+  +++   +L  +M+S+G KP VVTY
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             L  GL +  ++  A +L   M   G   +   Y    DGLCK   +  A +L  ++R
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIR 360



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRL 117
           D   Y  ++   C  G +  A +LL +M+ +  + P    YN  +   C +    EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M D   +P+VVTF+ ++  LCK G+++EA Q+L+ M + G   N   YNTL++G   
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVV 236
            GR   + E  + M+ M    +  +Y+ +I+G+CK+ EI+ A     EM  + G  P   
Sbjct: 137 AGR---SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           TY+ L  GL +   + +A +L  EM  R    A   A+ T +DG CK   +  A EL  +
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  D+ +YS +IDGLC+ G +   + L   +       DVVTY +++  LC  GK
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M +A  L   M   G  P+ V ++ +  G  + ++     +LL  + ++
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 124/230 (53%), Gaps = 6/230 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TY+ +I+G C++G    A    EEM    G     C PD   Y+ +I+GLCK   +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNL 208

Query: 77  DKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            KA ELL +M   K+    VV +N+++ G+C A D + A+ L   M++ G  P+VVT+S 
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+D LC+ G +++   LLE M+  G +P+   Y  L+ G C  G++  A  L   M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           C  N  +YS++ +G CK  +++ A  L + +  KG    VV +  L + +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV 378



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 6/136 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L + +   GC P+V+TYST+I+GLCR G       L E+M++        CKPD V
Sbjct: 246 RARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG------CKPDVV 299

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++ GLCK G + +A  L+ +M +    P+ VTY+ V  G C  +  + A  L   +
Sbjct: 300 TYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359

Query: 122 MDQGVQPNVVTFSVIM 137
            D+G   +VV F  ++
Sbjct: 360 RDKGRITDVVAFEALL 375


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 233/496 (46%), Gaps = 97/496 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA  LF  +K  GC PNV  ++ LI+GLC++G    A  LF+ M               I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  + G +              C PD   Y T+I GLC +   ++A+ELL     +   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 389

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P VVT+ ++I G+C A   ++A R+  +MM    + ++  F  +++ L K  +++EA +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P V+TY TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 273 YRTFIDGLCKNGYIVEALEL------------FRTL------------------RILK-- 300
           Y    D LCK G   EA               + TL                  R++   
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RG---------VLIADVV--------- 341
           C  D  +YS L+  LCK  RL  A  +   +  RG         +LI +++         
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 342 ----------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                           TY + I++ C +G+++ A DL L ME +GVAPD V +N L+ GC
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 386 IRNNETSKVVELLHRM 401
                  +    L RM
Sbjct: 750 GHMGYIDRAFSTLKRM 765



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 218/451 (48%), Gaps = 56/451 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A G  PNVITY+++I+G C++G   +AL + + M+  +G     C+P+A 
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDG-----CQPNAW 498

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GL K+  + KA  LL +M+   I P+V+TY ++++G C  +D + A RLF EM
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 557

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEA------------------------------- 149
           M+Q G++P+   ++V+ D LCK G+ EEA                               
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 150 -SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP+  TY        +  ++E A  L  +M+R GVA 
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK----------- 317
           D   Y   IDG    GYI  A    + +    CE +  +Y  L+  L K           
Sbjct: 738 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 797

Query: 318 SG-----RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           SG      L I W+L   + +  L   V TY+ +I   C  G++++A  L   M  KG++
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           P+   +  L+  C       K +  +  M E
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 193/398 (48%), Gaps = 7/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++++L   G  P+ +TY+T+I   C+ G    A   F  ++ G  E      P+      
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLE------PETFTCNA 223

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G C+ G + KA  L L M       +  +Y  +I+G C A    EA  LF+ M   G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNV  F+ ++  LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A 
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   ME  GC  + ++Y+ LI G C  K  E A  L +  + +G  PTVVT+  L  G 
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               + + A ++ ++M       D   +   I+ L K   + EA EL   +       ++
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +IDG CKSG++ IA E+   + R     +  TYN +++ L  D K+ KA  L   
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+  G+ P+ + + TL+ G    ++      L   M++
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 193/413 (46%), Gaps = 25/413 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  PNVITY+TL+ G C       A  LFE M+  NG      KPD  
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEH 568

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  + D LCK G  ++A   +++   K +    V Y ++I GF  A +++ A  L   M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+  T+SV++  LCK  ++ EA  +L+ M   G++   F Y  L+D     G+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK ++  M S G K +  +Y++ IN YCK   +E A  L  +M  +G+ P VVTYN L
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN--GYIVEA--------LE 291
             G   +  ++RAF     M       + W Y   +  L K    Y+           +E
Sbjct: 746 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 292 LFRTLRILK------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           L  T ++L+          + +YS LI G CK+GRL+ A  L   +    L  +   Y +
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I   C     +KA      M   G  P   ++  L++G     +  KV  L 
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 22/324 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G +  +  Y+ LI+ + R G    A  ++ EM +         KP A 
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 705

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  I+  CKEG ++ A++L+L+M+ + + PDVVTYN +I G  +    + A      M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 122 MDQGVQPNVVTFSVIMDELCKNG----------------KMEEASQLLELMIQIGVRPNA 165
           +    +PN  T+ +++  L K                  +++   QLLE M++ G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P + +Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 286 IVEALELFRTLRILKCELDIRSYS 309
           +    ++   +    C +  ++Y+
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYA 969



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 156/382 (40%), Gaps = 57/382 (14%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y+TLI+G  + G+T  A  L E MI+        C PD+  Y+ ++  LCK+  +++A
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEG------CTPDSYTYSVLLHALCKQKRLNEA 653

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             +L QM  + I   +  Y  +I         + AKR++ EM   G +P+  T++V ++ 
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK G++E+A  L+  M + GV P+   YN L+DG    G ++RA      M    C+ N
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773

Query: 200 ---------------------------------------------------VFSYSILIN 208
                                                              V +YS LI 
Sbjct: 774 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+CK   +E A  L   M  KG+ P    Y  L     +    E+A      M   G   
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +YR  + GLC  G   +   LF  L  L    D  ++  L DGL K+G + I +++ 
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 329 HSLPRGVLIADVVTYNIMIHAL 350
             + +        TY ++ + +
Sbjct: 954 SIMEKRYCCISSQTYALVTNKM 975



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%)

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A++  R     +  L  + Y+  +  L +    +    ++  L +  L+ D VTYN M
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 189

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I + C +G +  AH  F  +   G+ P+    N L+LG  R  E  K   L   M
Sbjct: 190 IKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 42/434 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K+     E  V  Y++LING C+ G+   A   F+EMI+          P  V 
Sbjct: 246 AIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG------LTPTVVT 299

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT++I G C EG   KA ++  +M  K I+P+  T+ ++I G C AN   EA RLF EM 
Sbjct: 300 YTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMK 359

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + P+ VT++V+++  C++G + EA  LL+ M+  G  P+ + Y  L+ G C  GRV+
Sbjct: 360 ERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVS 419

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AKE    +     K N   YS L++GYCK    + A+S    M+ +G+   +V Y  L 
Sbjct: 420 EAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILI 479

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G    H     F L  EM  HG+  D   Y   ID   K G + EA  L+  +    C 
Sbjct: 480 DGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL 539

Query: 303 LDIRSYSCLIDGLCKS-----------------------------------GRLKIAWEL 327
            ++ +Y+ LI+GLCK+                                   G ++ A +L
Sbjct: 540 PNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQL 599

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            H++ +G L A  V+YNI+I   C  GK+++A  L   M    + PD + ++T++    +
Sbjct: 600 HHAMLKGFL-ATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCK 658

Query: 388 NNETSKVVELLHRM 401
            +   + ++L H M
Sbjct: 659 RSNLQEAIKLWHTM 672



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 193/396 (48%), Gaps = 15/396 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  + +   +P++  YS ++  LC     +   N  +EMI+   EF   CK   V+Y  
Sbjct: 118 LFDDIVSANVQPDIYIYSAVVRSLCE----LKDFNKAKEMIHWM-EFN-QCKLSIVVYNV 171

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GLCK   + +A E+   +  K +  +VVTY             NEA+ LF EM ++G
Sbjct: 172 LIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKF---------NEAELLFKEMGEKG 222

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  N +T+S+++D  C+ G+M+ A   L+ M +  +    + YN+L++G+C  G  + AK
Sbjct: 223 LCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAK 282

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F  M   G    V +Y+ LI+GYC   E   A  +Y+EM +KGI P   T+  +  GL
Sbjct: 283 YYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGL 342

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
              + +  A +LF EM+   +      Y   I+G C++G I EA  L   +       D 
Sbjct: 343 CRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDT 402

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  LI GLC  GR+  A E    L +     + + Y+ ++H  C +G+   A      
Sbjct: 403 YTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRV 462

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  +GVA D V +  L+ G  R ++T  +  LL  M
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM 498



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 15/388 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P V T S L+NGL R       L LF+++++ N       +PD  IY+ ++  LC+    
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSAN------VQPDIYIYSAVVRSLCELKDF 147

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +KAKE++  M+       +V YN +I G C +    EA  +   +M +G++ NVVT+   
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY-- 205

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
                  GK  EA  L + M + G+  N   Y+ L+D FC  G ++ A      M     
Sbjct: 206 -------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASI 258

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           +  V+ Y+ LINGYCK      A   + EM+ KG+ PTVVTY +L  G     +  +AFK
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +++EM   G++ +T+ +   I GLC+   + EA+ LF  ++  K      +Y+ +I+G C
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +SG +  A+ L   +     + D  TY  +I  LC+ G++ +A +   D+       + +
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++ L+ G  +       V     M ER
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMVER 466



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 195/448 (43%), Gaps = 67/448 (14%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALN--------------------------LFEEMING 48
           C+ +++ Y+ LI+GLC++     AL                           LF+EM   
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEM--- 218

Query: 49  NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
            GE G+    + + Y+ +ID  C+ G +D A   L +M   +I   V  YNS+I G+C  
Sbjct: 219 -GEKGLCA--NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
            +++ AK  F EM+D+G+ P VVT++ ++   C  G+  +A ++   M   G+ PN + +
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             ++ G C    +  A  LF  M+      +  +Y+++I G+C++  I  A  L  EM+ 
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG  P   TY  L  GL  + +V  A +  D++ +     +   Y   + G CK G   +
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLC-------------------------------- 316
           A+   R +      +D+  Y+ LIDG                                  
Sbjct: 456 AVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMID 515

Query: 317 ---KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              K+G LK A+ L+  +     + +VVTY  +I+ LC  G MDKA  L  +     V P
Sbjct: 516 RHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTP 575

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + + +   +    R     K V+L H M
Sbjct: 576 NHITYGCFLDHLTRGGNMEKAVQLHHAM 603



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 7/376 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K     P+ +TY+ +I G CR+G+   A +L +EM+      G V  PD  
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGK----GFV--PDTY 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC  G V +AKE +  +   +   + + Y++++ G+C      +A      M
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVM 463

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV  ++V +++++D   +         LL+ M   G+RP+A +Y  ++D     G +
Sbjct: 464 VERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNL 523

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   GC  NV +Y+ LING CK   ++ A  L  E L   + P  +TY   
Sbjct: 524 KEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCF 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     +E+A +L   M + G  A T +Y   I G C+ G I EA +L   +     
Sbjct: 584 LDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +YS +I   CK   L+ A +L+H++    L  D + Y+ ++H  C  G+++KA +
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702

Query: 362 LFLDMEAKGVAPDCVA 377
           L  +M  +G+  + V 
Sbjct: 703 LRDEMIRRGMRSNHVT 718



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 156/344 (45%), Gaps = 29/344 (8%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           MKD N+ P+V T ++++ G       N+   LF +++   VQP++  +S ++  LC+   
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT--------------------------G 179
             +A +++  M     + +  VYN L+ G C +                          G
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + N A+ LF  M   G   N  +YSILI+ +C+  E++ A+    +M    I+ TV  YN
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G  ++     A   FDEM   G+      Y + I G C  G   +A +++  +   
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  +++ +I GLC++  +  A  LF  +    ++   VTYN+MI   C  G + +A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCI---RNNETSKVVELLHR 400
             L  +M  KG  PD   +  L+ G     R +E  + V+ LH+
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHK 430



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 9/284 (3%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D  + P V T S +++ L +  +  +   L + ++   V+P+ ++Y+ ++   C    
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            N+AKE+   ME   CK ++  Y++LI+G CK++ I  AL + + ++ KG++  VVTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            F           A  LF EM   G+ A+   Y   ID  C+ G +  A+     +    
Sbjct: 207 KF---------NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E  +  Y+ LI+G CK G    A   F  +    L   VVTY  +I   C +G+  KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++ +M AKG++P+   F  ++ G  R N  ++ + L   M ER
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKER 361



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ME A         G     ++Y+ LI G CR G    A  L   M + +        PD 
Sbjct: 593 MEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND------ILPDY 646

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y+TII   CK   + +A +L   M DK + PD + Y+ ++ G C A +  +A  L  E
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 121 MMDQGVQPNVVT 132
           M+ +G++ N VT
Sbjct: 707 MIRRGMRSNHVT 718



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +      P+ ITYST+I   C+  +   A+ L+  M++         KPD +
Sbjct: 629 EATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKG------LKPDTL 682

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS 100
            Y+ ++ G C  G ++KA EL  +M  + +  + VT  S
Sbjct: 683 AYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 205/383 (53%), Gaps = 6/383 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++ + G   NV  Y+T+I+   + GH + A+   E MI    E G  CKPD V Y T
Sbjct: 296 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI----ECG--CKPDIVTYNT 349

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G C++G V +A +LL Q   K + P+  +Y  +I  +C     + A    IEM ++G
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P++VT+  ++  L   G+++ A  + E M++ GV P+A +YN LM G C   ++  AK
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M       + F Y+ L++G+ +N  ++ A  L+   + KG+ P +V YN +  G 
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A    + M++  +A D + Y T IDG  K   +  A ++FR +  +KC+ ++
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LI+G C+ G L  + ++F  +    L+ +VVTY+I+I + C + K+  A   F +
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649

Query: 366 MEAKGVAPDCVAFNTLMLGCIRN 388
           M      P+ V FN L+ G  +N
Sbjct: 650 MLMNKCVPNDVTFNYLVNGFSKN 672



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 201/384 (52%), Gaps = 20/384 (5%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+++TY+TLI+G CR G    A  L E+ + G G       P+   YT +I   CK+
Sbjct: 339 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL-GKGLM-----PNKFSYTPLIHAYCKQ 392

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  D+A   L++M ++   PD+VTY +++ G   A + + A  +  +M+++GV P+   +
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++M  LCK  K+  A  LL  M+   V P+AFVY TL+DGF   G ++ A++LF     
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    +  Y+ +I GYCK   ++ A++  + M  + + P   TY+T+  G  + H ++ 
Sbjct: 513 KGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDG 572

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K+F EM +     +   Y + I+G C+ G +  +L++FR ++      ++ +YS LI 
Sbjct: 573 AQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIG 632

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK----------MDKAHDLF 363
             CK  +L  A   F  +     + + VT+N +++    +G            +    +F
Sbjct: 633 SFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMF 692

Query: 364 LD----MEAKGVAPDCVAFNTLML 383
           L+    M + G AP   A+N++++
Sbjct: 693 LNFFGRMISDGWAPRSAAYNSILI 716



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 203/425 (47%), Gaps = 33/425 (7%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM--INGNGE---------------- 51
           LK +   P+VI  ++L+N L + G   +A  L++EM  I+G G+                
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC 215

Query: 52  ---------------FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
                          +G  C P+ + Y T+IDG CK+G ++ A  L +++K K   P V 
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVE 275

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           TY ++I GFC   D     RL +EM  +G+  NV  ++ I+D   K+G + +A + +E M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           I+ G +P+   YNTL+ G C  G+V+ A +L       G   N FSY+ LI+ YCK    
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGY 395

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A +   EM  +G KP +VTY  L  GL    +V+ A  + ++M   GV  D   Y   
Sbjct: 396 DRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNIL 455

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           + GLCK   +  A  L   +       D   Y+ L+DG  ++G L  A +LF       +
Sbjct: 456 MSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGM 515

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
              +V YN MI   C  G M  A      M+ + +APD   ++T++ G ++ ++     +
Sbjct: 516 NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQK 575

Query: 397 LLHRM 401
           +   M
Sbjct: 576 MFREM 580



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 184/373 (49%), Gaps = 56/373 (15%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+    ++   G +P+++TY  L++GL   G   VAL + E+M+    E GV   PDA I
Sbjct: 398 ASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML----ERGVF--PDAGI 451

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK+  +  AK LL +M D+++ PD   Y +++ GF    + +EA++LF   +
Sbjct: 452 YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTI 511

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P +V ++ ++   CK G M++A   +  M +  + P+ F Y+T++DG+     ++
Sbjct: 512 EKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLD 571

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++F  M  M CK NV +Y+ LING+C+  ++  +L ++ EM + G+ P VVTY+ L 
Sbjct: 572 GAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILI 631

Query: 243 IGLFEIHQVERAFKLFDEM-------------------QRHGVAA--------------- 268
               +  ++  A   F+EM                    ++G  A               
Sbjct: 632 GSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSM 691

Query: 269 ----------DTWA-----YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
                     D WA     Y + +  LC+ G    AL+L   +    C  D  S+  L+ 
Sbjct: 692 FLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLH 751

Query: 314 GLCKSGRLKIAWE 326
           G+C  GR K  W+
Sbjct: 752 GVCLEGRSK-EWK 763



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 171/347 (49%), Gaps = 5/347 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y++++  L +     + + +L  M+ + ++P     + VI+ +  +    +A  L+  ++
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 123 DQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN----TLMDGFCL 177
                 P+V+  + +++ L K G++E A +L + M++I    +  V N     ++ G C 
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G++   ++L       GC  N+  Y+ LI+GYCK  ++E A  L+ E+  KG  PTV T
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  +  G  +    +   +L  EM   G+  +   Y T ID   K+G+IV+A+E    + 
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C+ DI +Y+ LI G C+ G++  A +L        L+ +  +Y  +IHA C  G  D
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A +  ++M  +G  PD V +  L+ G +   E    + +  +M ER
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 443



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 36/254 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++    C+PNV+TY++LING CR G    +L +F EM       G+V  P+ V 
Sbjct: 573 AQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM----QACGLV--PNVVT 626

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC---------YANDSNE 113
           Y+ +I   CKE  +  A     +M      P+ VT+N ++ GF            N+  E
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQE 686

Query: 114 AKR-----LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
            K+      F  M+  G  P    ++ I+  LC+ G    A QL   M   G  P++  +
Sbjct: 687 NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             L+ G CL GR    K +      + C  N     I +N            S+  + L 
Sbjct: 747 VALLHGVCLEGRSKEWKNI------VSCNLNERELQIAVN----------YSSILDQYLP 790

Query: 229 KGIKPTVVTYNTLF 242
           +G     V   T+F
Sbjct: 791 QGTSEASVILQTMF 804



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA--------------LNLFEEMI 46
           ++AA+ F ++    C PN +T++ L+NG  + G   ++              LN F  MI
Sbjct: 641 IDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMI 700

Query: 47  NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
           +          P +  Y +I+  LC+ G    A +L  +M  K   PD V++ +++ G C
Sbjct: 701 SDG------WAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVC 754

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
               S E K +    +++      V +S I+D+    G   EAS +L+ M +
Sbjct: 755 LEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG-TSEASVILQTMFE 805


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 205/421 (48%), Gaps = 21/421 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPDA 60
           A  L  K+   G +P  + Y+ LI G+C T    ++  + L E   N   E GVV   + 
Sbjct: 30  AYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVL--NK 87

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V        LC  G  +KA  ++ +M  K   PD  TY+ VI   C A+   +A +LF E
Sbjct: 88  VNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQE 147

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+V T++ ++D  CK G +E+A    + M Q G  PN   Y  L+  +  T +
Sbjct: 148 MKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRK 207

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           ++RA E+F  M S GC  N+ +Y+ LI+G+CK  E E A  +Y+ M +  +         
Sbjct: 208 LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYF 267

Query: 232 --------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                   +P VVTY  L  GL + H+V+ A  L + M   G   +   Y   IDG CK 
Sbjct: 268 RIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKV 327

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + EA E+F  +    C  ++ +YS LID L K  RL +A ++   +       +VV Y
Sbjct: 328 GKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIY 387

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             M+  LC  GK D+A+ L L ME KG  P+ V +  ++ G  +     + +ELL  M  
Sbjct: 388 TEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTS 447

Query: 404 R 404
           +
Sbjct: 448 K 448



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 205/406 (50%), Gaps = 14/406 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-------FGVV 55
           A  +F  + + GC PN++TY+ LI+G C+ G T  A  ++  M N   +       F +V
Sbjct: 211 ANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIV 270

Query: 56  ----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                +P+ V Y  ++DGLCK   V +A++LL  M  +   P+ + Y+++I GFC     
Sbjct: 271 DSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKL 330

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M+  G  PNV T+S ++D+L K+ +++ A ++L  M++    PN  +Y  +
Sbjct: 331 DEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEM 390

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A  L + ME  GC  NV +Y+ +I+G+ K   ++  L L   M SKG 
Sbjct: 391 VDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGC 450

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  +TY  L         ++ A KL +EM++         YR  I+G       V +L 
Sbjct: 451 APNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLG 508

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   L        +  Y  LID   K+GRL++A EL   L      A   TY  +I +L 
Sbjct: 509 LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL-SSFSAAYQNTYVSLIESLT 567

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              K+DKA  L+ DM  +G  P+      L+ G +R  +  + ++L
Sbjct: 568 LACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 185/368 (50%), Gaps = 23/368 (6%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TYS +I  LC       A  LF+EM   NG       PD   YTT++D  CK G +
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEM-KRNG-----ITPDVYTYTTLLDRFCKVGLI 173

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A+    +M+     P+VVTY ++I  +      + A  +F  M+  G  PN+VT++ +
Sbjct: 174 EQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTAL 233

Query: 137 MDELCKNGKMEEASQLLELM---------IQIGVR--------PNAFVYNTLMDGFCLTG 179
           +D  CK G+ E+A Q+   M         + I  R        PN   Y  L+DG C   
Sbjct: 234 IDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAH 293

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V  A++L  +M   GC+ N   Y  LI+G+CK  +++ A  ++++ML  G  P V TY+
Sbjct: 294 KVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYS 353

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L   LF+  +++ A K+  +M  +  A +   Y   +DGLCK G   EA  L   +   
Sbjct: 354 SLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEK 413

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  ++ +Y+ +IDG  K+GR+    EL   +       + +TY ++I+  CA G +D A
Sbjct: 414 GCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDA 473

Query: 360 HDLFLDME 367
           H L  +M+
Sbjct: 474 HKLLEEMK 481



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 182/366 (49%), Gaps = 23/366 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  G  P+V TY+TL++  C+ G    A N F+EM          C P+ V
Sbjct: 140 KAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDG------CAPNVV 193

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I    K   + +A E+   M      P++VTY ++I G C A ++ +A +++  M
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 122 MDQGV-----------------QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            +  V                 +PNVVT+  ++D LCK  K++EA  LLE M   G  PN
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +Y+ L+DGFC  G+++ A+E+F  M   GC  NV++YS LI+   K+K ++ AL + +
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLT 373

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +ML     P VV Y  +  GL ++ + + A++L   M+  G   +   Y   IDG  K G
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            +   LEL + +    C  +  +Y  LI+  C +G L  A +L   + +      +  Y 
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYR 493

Query: 345 IMIHAL 350
            +I   
Sbjct: 494 KVIEGF 499



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 196/404 (48%), Gaps = 42/404 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC--KPDAVIYTTIIDGLC 71
           GC P+ + +++L++  CR+G    A  L ++M        V+C  +P  V+Y  +I G+C
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKM--------VICGYQPGYVVYNILIGGIC 57

Query: 72  KE---------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
                      G  ++A   +L+M    +  + V   +  R  C      +A  +  EMM
Sbjct: 58  STEDLPSMEVIGLAERAYNEMLEM---GVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMM 114

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+  T+S ++  LC   K+E+A QL + M + G+ P+ + Y TL+D FC  G + 
Sbjct: 115 SKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIE 174

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A+  F  M+  GC  NV +Y+ LI+ Y K +++  A  ++  MLS G  P +VTY  L 
Sbjct: 175 QARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALI 234

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            G  +  + E+A +++  M+   V   D   Y   +D   K                   
Sbjct: 235 DGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK------------------- 275

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ +Y  L+DGLCK+ ++K A +L  ++       + + Y+ +I   C  GK+D+A +
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +F  M   G +P+   +++L+    ++      +++L +M E +
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS 379



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 158/305 (51%), Gaps = 13/305 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +FTK+   GC PNV TYS+LI+ L +     +AL +  +M+  +      C P+ V
Sbjct: 332 EAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS------CAPNVV 385

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT ++DGLCK G  D+A  L+L M++K   P+VVTY ++I GF  A   +    L   M
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN +T+ V+++  C  G +++A +LLE M Q     +  +Y  +++GF  +   
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEF 503

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             +  L   +   G    +  Y +LI+ + K   +E AL L+ E LS        TY +L
Sbjct: 504 VASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEE-LSSFSAAYQNTYVSL 562

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +V++AFKL+ +M R G   +       I GL + G   EAL+L  ++    C
Sbjct: 563 IESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI----C 618

Query: 302 ELDIR 306
           ++DI 
Sbjct: 619 QMDIH 623



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 165/330 (50%), Gaps = 9/330 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   GCEPN I Y  LI+G C+ G    A  +F +M+ G+G     C P+  
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML-GHG-----CSPNVY 350

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++ID L K+  +D A ++L +M + +  P+VV Y  ++ G C    ++EA RL + M
Sbjct: 351 TYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMM 410

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PNVVT++ ++D   K G+++   +LL+LM   G  PN   Y  L++  C  G +
Sbjct: 411 EEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLL 470

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M+      ++  Y  +I G+  + E   +L L +E+   G  P +  Y  L
Sbjct: 471 DDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLL 528

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  ++E A +L +E+     A     Y + I+ L     + +A +L+  +     
Sbjct: 529 IDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKVDKAFKLYSDMTRRGF 587

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             ++    CLI GL + G+ + A +L  S+
Sbjct: 588 VPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 23/304 (7%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+ + F+ ++   C++G    A +LL+ M+  G +P   VYN L+ G C T  
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 181 ------VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                 +  A+  +  M  MG   N  +        C   + E A ++  EM+SKG  P 
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TY+ +   L    +VE+AF+LF EM+R+G+  D + Y T +D  CK G I +A   F 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++   C  ++ +Y+ LI    K+ +L  A E+F  +     + ++VTY  +I   C  G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 355 KMDKAHDLFLDMEAKGV-----------------APDCVAFNTLMLGCIRNNETSKVVEL 397
           + +KA  ++  M+   V                  P+ V +  L+ G  + ++  +  +L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 398 LHRM 401
           L  M
Sbjct: 302 LETM 305



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 6/253 (2%)

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           +MI  G  P+  ++N+L+  +C +G    A +L   M   G +     Y+ILI G C  +
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 215 EIEG------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           ++        A   Y+EML  G+    V        L  I + E+A+ +  EM   G   
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D+  Y   I  LC    + +A +LF+ ++      D+ +Y+ L+D  CK G ++ A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + +     +VVTY  +IHA     K+ +A+++F  M + G  P+ V +  L+ G  + 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 389 NETSKVVELLHRM 401
            ET K  ++  RM
Sbjct: 241 GETEKACQIYARM 253


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 204/391 (52%), Gaps = 10/391 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +PN++TY+ +I  LC+ G    A++ F EM   N      C PD   Y+T+++GLCKE
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN------CNPDVFTYSTLMNGLCKE 222

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD+A  LL +M+ +   P+ VT+N +I       D + A +L   M  +G  PN VT+
Sbjct: 223 RRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 282

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  GK+++A  LLE M+     PN   Y T+++G     R      + +SME 
Sbjct: 283 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 342

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K N + YS LI+G  K  + E A+ L+ EM  KG KP VV Y     GL    + + 
Sbjct: 343 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +  EM   G   + + Y + + G  K G   +A+ +++ +       ++   S L++
Sbjct: 403 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 462

Query: 314 GLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK--G 370
           GLC+SGRL+ A  ++ H L  G L  DVV Y+ MI  LC  G +DK   LF +M+ +   
Sbjct: 463 GLCESGRLREALTVWTHMLGEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK 521

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             PD V +N L     R +  ++ ++LL+ M
Sbjct: 522 SRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 198/384 (51%), Gaps = 12/384 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F ++    C P+V TYSTL+NGLC+      A+ L +EM    G     C P+ V 
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM-QAEG-----CLPNPVT 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +ID L K G + +A +L+  M  K   P+ VTYN++I G C     ++A  L  +M+
Sbjct: 247 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 306

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN VT+  I++ L K  + E+   +L  M + G + N ++Y++L+ G    G+  
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 366

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L+  M   GCK NV  Y   I+G C++++ + A  +  EMLSKG  P   TY++L 
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 426

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+    ++A  ++ EM    +  +       ++GLC++G + EAL ++  +     +
Sbjct: 427 KGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLK 486

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKMDK 358
            D+ +YS +I GLC  G +    +LF+ +    P+     DVVTYNI+ +ALC    + +
Sbjct: 487 PDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLTR 544

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLM 382
           A DL   M  +G  PD +  N  +
Sbjct: 545 AIDLLNSMLDEGCDPDSLTCNIFL 568



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 45/348 (12%)

Query: 2   EAAALFTKLKAFGCEPNV-----------------------------------ITYSTLI 26
           EA  L  +++A GC PN                                    +TY+TLI
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 27  NGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           +GLC  G    AL+L E+M++        C P+ V Y TII+GL K+   +    +L+ M
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHILMSM 340

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           +++    +   Y+S+I G      S  A RL+ EM ++G +PNVV +   +D LC++ K 
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 400

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA  +L+ M+  G  PNAF Y++LM GF   G   +A  ++  M S   +HNV   S+L
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           +NG C++  +  AL++++ ML +G+KP VV Y+++  GL ++  V++  KLF EM  Q  
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
               D   Y    + LC+   +  A++L  ++    C+ D  S +C I
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPD--SLTCNI 566



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 43/402 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM---KDKNINPD 94
           A+N F  M N      + CK     + ++++ + +EG    A +  L +     K   P+
Sbjct: 119 AVNFFHRMAND-----LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 173

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           ++TYN +I+  C     + A   F EM  +   P+V T+S +M+ LCK  +++EA  LL+
Sbjct: 174 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 233

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   +N L+D     G ++RA +L  +M   GC  N  +Y+ LI+G C   
Sbjct: 234 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 293

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ ALSL  +M+S    P  VTY T+  GL +  + E    +   M+  G  A+ + Y 
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + I GL K G    A+ L++ +    C+ ++  Y   IDGLC+  +   A ++   +   
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 335 VLIADVVTY-----------------------------------NIMIHALCADGKMDKA 359
             + +  TY                                   +++++ LC  G++ +A
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 473

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++  M  +G+ PD VA+++++ G        K ++L + M
Sbjct: 474 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%)

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S G + N+ +Y+++I   CK  +I+ A+  + EM  K   P V TY+TL  GL +  +V+
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L DEMQ  G   +   +   ID L KNG +  A +L   + +  C  +  +Y+ LI
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            GLC  G+L  A  L   +     + + VTY  +I+ L    + +    + + ME +G  
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   +++L+ G  +  ++   V L   M E+
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEK 378



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 120/240 (50%), Gaps = 22/240 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ + G  PN  TYS+L+ G  + G +  A+ +++EM++ +    VVC     
Sbjct: 402 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVC----- 456

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLC+ G + +A  +   M  + + PDVV Y+S+I+G C     ++  +LF EM
Sbjct: 457 -CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515

Query: 122 MDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
             Q    +P+VVT++++ + LC+   +  A  LL  M+  G  P++   N  ++   L  
Sbjct: 516 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE--TLRE 573

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+N  ++  + ++             L+    K +    AL +  EML + + P   T++
Sbjct: 574 RINPPQDGRLFLDE------------LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWS 621



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++T +   G +P+V+ YS++I GLC  G     L LF EM     +     +PD V
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK----SRPDVV 527

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI-- 119
            Y  + + LC++  + +A +LL  M D+  +PD +T N  +       +  +  RLF+  
Sbjct: 528 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 587

Query: 120 -------------------EMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
                              EM+ + + P   T+S ++   CK  ++ E 
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 204/391 (52%), Gaps = 10/391 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +PN++TY+ +I  LC+ G    A++ F EM   N      C PD   Y+T+++GLCKE
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN------CNPDVFTYSTLMNGLCKE 246

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD+A  LL +M+ +   P+ VT+N +I       D + A +L   M  +G  PN VT+
Sbjct: 247 RRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 306

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  GK+++A  LLE M+     PN   Y T+++G     R      + +SME 
Sbjct: 307 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 366

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K N + YS LI+G  K  + E A+ L+ EM  KG KP VV Y     GL    + + 
Sbjct: 367 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +  EM   G   + + Y + + G  K G   +A+ +++ +       ++   S L++
Sbjct: 427 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 486

Query: 314 GLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK--G 370
           GLC+SGRL+ A  ++ H L  G L  DVV Y+ MI  LC  G +DK   LF +M+ +   
Sbjct: 487 GLCESGRLREALTVWTHMLGEG-LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK 545

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             PD V +N L     R +  ++ ++LL+ M
Sbjct: 546 SRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 198/385 (51%), Gaps = 12/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F ++    C P+V TYSTL+NGLC+      A+ L +EM    G     C P+ V
Sbjct: 216 RAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM-QAEG-----CLPNPV 269

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID L K G + +A +L+  M  K   P+ VTYN++I G C     ++A  L  +M
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VT+  I++ L K  + E+   +L  M + G + N ++Y++L+ G    G+ 
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   GCK NV  Y   I+G C++++ + A  +  EMLSKG  P   TY++L
Sbjct: 390 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    ++A  ++ EM    +  +       ++GLC++G + EAL ++  +     
Sbjct: 450 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 509

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           + D+ +YS +I GLC  G +    +LF+ +    P+     DVVTYNI+ +ALC    + 
Sbjct: 510 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLT 567

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A DL   M  +G  PD +  N  +
Sbjct: 568 RAIDLLNSMLDEGCDPDSLTCNIFL 592



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 43/402 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM---KDKNINPD 94
           A+N F  M N      + CK     + ++++ + +EG    A +  L +     K   P+
Sbjct: 143 AVNFFHRMAND-----LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 197

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           ++TYN +I+  C     + A   F EM  +   P+V T+S +M+ LCK  +++EA  LL+
Sbjct: 198 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 257

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   +N L+D     G ++RA +L  +M   GC  N  +Y+ LI+G C   
Sbjct: 258 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 317

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ ALSL  +M+S    P  VTY T+  GL +  + E    +   M+  G  A+ + Y 
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           + I GL K G    A+ L++ +    C+ ++  Y   IDGLC+  +   A ++   +   
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437

Query: 335 VLIADVVTY-----------------------------------NIMIHALCADGKMDKA 359
             + +  TY                                   +++++ LC  G++ +A
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 497

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++  M  +G+ PD VA+++++ G        K ++L + M
Sbjct: 498 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%)

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S G + N+ +Y+++I   CK  +I+ A+  + EM  K   P V TY+TL  GL +  +V+
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L DEMQ  G   +   +   ID L KNG +  A +L   + +  C  +  +Y+ LI
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            GLC  G+L  A  L   +     + + VTY  +I+ L    + +    + + ME +G  
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   +++L+ G  +  ++   V L   M E+
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEK 402



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 120/240 (50%), Gaps = 22/240 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++ + G  PN  TYS+L+ G  + G +  A+ +++EM++ +    VVC     
Sbjct: 426 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVC----- 480

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLC+ G + +A  +   M  + + PDVV Y+S+I+G C     ++  +LF EM
Sbjct: 481 -CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539

Query: 122 MDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
             Q    +P+VVT++++ + LC+   +  A  LL  M+  G  P++   N  ++   L  
Sbjct: 540 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE--TLRE 597

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+N  ++  + ++             L+    K +    AL +  EML + + P   T++
Sbjct: 598 RINPPQDGRLFLDE------------LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWS 645



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++T +   G +P+V+ YS++I GLC  G     L LF EM     +     +PD V
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK----SRPDVV 551

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI-- 119
            Y  + + LC++  + +A +LL  M D+  +PD +T N  +       +  +  RLF+  
Sbjct: 552 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 611

Query: 120 -------------------EMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
                              EM+ + + P   T+S ++   CK  ++ E 
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 203/386 (52%), Gaps = 7/386 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN  TY+ LI+ LC  G    AL++ ++M+         C PD V Y  +++  CK   
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRG------CAPDVVTYNILLEATCKGRG 57

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A EL+  M+ +   P+ VTYN ++ G C   D ++A  L   +   G +P+ V ++ 
Sbjct: 58  YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   +  +A +L+  M++    PN   +N ++   C  G + +A +L   M   G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N+ +Y+ +ING C+ + ++GA+ L S+M S G KP +VTYNTL  GL    +   A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L D M ++G   D   + T I  LC+ G +V+A+E+F+ +    C  +  +YS +I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            K+ +L  A ELF+ +       D + Y ++   L  D  +++A      ++  G++P  
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 356

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V +N ++LG  RN +T   ++++  M
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDIMAYM 382



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 166/314 (52%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P+  TYN +I   C      +A  +  +M+ +G  P+VVT++++++  CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L++LM   G  PN   YN LMDG C  G V+ A EL  ++ S GCK +  +Y+ ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C  +    A  L +EML +   P   T+N +   L     +++A +L ++M +HG  A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+GLC+   +  A+ L   ++   C+ DI +Y+ L+ GLC + R   A EL  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +   + D VT+N +I  LC  G M  A ++F  M  KG  P+ + ++T++ G  +  +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 391 TSKVVELLHRMDER 404
             + +EL + M  +
Sbjct: 303 LDQALELFNEMGHK 316



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 42/405 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++   +   GC P+V+TY+ L+   C+      A+ L + ++   G     C P+ V
Sbjct: 25  DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID-LMRAEG-----CTPNNV 78

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DG+C EG VD A ELL  +      P  V YN+V++G C A    +A  L  EM
Sbjct: 79  TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TF+V++  LC+ G +++A QLLE M + G   N   YN +++G C    V
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 198

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCK------------NKEIEG----------- 218
           + A  L   M+S GCK ++ +Y+ L+ G C             N    G           
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL 258

Query: 219 ------------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                       A+ ++ +M  KG  P  +TY+T+  GL +  ++++A +LF+EM   G 
Sbjct: 259 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 318

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y+   + L  +  I EA++  R L+          Y+ ++ GLC++G+ + A +
Sbjct: 319 NPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +   +     + D +TY I+I  L  +G +++A +L + + ++ V
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 173/341 (50%), Gaps = 8/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   L + GC+P+ + Y+T++ GLC       A  L  EM+  N      C P+  
Sbjct: 95  DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN------CPPNEA 148

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  LC++G + +A +LL +M       ++VTYN++I G C   + + A  L  +M
Sbjct: 149 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 208

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT++ ++  LC   +  +A +L++ M Q G  P+   +NTL+   C  G +
Sbjct: 209 KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M   GC  N  +YS +I+G  K  +++ AL L++EM  KG  P  + Y  L
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLL 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   +E A +   ++Q  G++  T  Y   + GLC+NG    A+++   +    C
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV 341
             D  +Y  LI+GL   G L  A EL   L  R VL+  ++
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLI 428



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           M  + N ++Y+ LI+  C+  ++  ALS+  +ML +G  P VVTYN L     +     +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L D M+  G   +   Y   +DG+C  G + +ALEL R L    C+    +Y+ ++ 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC + R   A EL   + R     +  T+N++I++LC  G + +A  L   M   G   
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V +N ++ G          + LL +M
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKM 208



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 65/140 (46%)

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           V  + + Y   I  LC+ G + +AL +   +    C  D+ +Y+ L++  CK    + A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL   +       + VTYN+++  +C +G +D A +L  ++ + G  P  V +NT++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 386 IRNNETSKVVELLHRMDERN 405
                     EL+  M   N
Sbjct: 123 CSAERWGDADELVTEMLREN 142


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 199/394 (50%), Gaps = 7/394 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +  GC PN +TY+ +I GL R G    A  L E M        +  K  +  Y  +I GL
Sbjct: 233 RGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-------RLSKKASSFTYNPLITGL 285

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
              G V K  +L L+M+++ I P VVTYN++I G   +     A+  F EM   G+ P+V
Sbjct: 286 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 345

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           +T++ +++  CK G ++EA  L   + + G+ P    YN  +DG+C  G +  A+ L   
Sbjct: 346 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEE 405

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC  NV +Y+IL+ G      +  A   + EMLSKG++P    YNT       +  
Sbjct: 406 MGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 465

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           + RA +L + +   G+++DT  Y   I GLCK G + +A EL   +     + D  +Y+C
Sbjct: 466 IARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 525

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI   C+ G L+ A ++F+++    L+   VT+ ++IHA C  G +  A+  F  M  +G
Sbjct: 526 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 585

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V P+ + +N L+    R   T       H M ER
Sbjct: 586 VEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 619



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 196/387 (50%), Gaps = 8/387 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIY 63
           A+  ++   G EP+++TY+TL++   + G       L +EM   G+G     C P+ V Y
Sbjct: 190 AVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSG-----CLPNDVTY 244

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
             +I GL ++G +++A EL+  M+         TYN +I G        +   L +EM +
Sbjct: 245 NVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMEN 303

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ P VVT++ ++  L ++G +E A      M  +G+ P+   YN+L++G+C  G +  
Sbjct: 304 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKE 363

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  LF  +   G    V +Y+I I+GYC+  ++E A  L  EM  +G  P V TY  L  
Sbjct: 364 ALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 423

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G   +  +  A + FDEM   G+  D +AY T I      G I  ALEL   L +     
Sbjct: 424 GSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISS 483

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+ LI GLCK+G LK A EL   +    L  D +TY  +IHA C  G + +A  +F
Sbjct: 484 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 543

Query: 364 LDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            +M + G+ P  V F  ++   C R N
Sbjct: 544 NNMISDGLLPSAVTFTVIIHAYCRRGN 570



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 184/371 (49%), Gaps = 6/371 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P V+TY+ +I+GL ++G    A   F EM       G++  PD + Y ++++G CK 
Sbjct: 305 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM----RAMGLL--PDVITYNSLLNGYCKA 358

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A  L   ++   + P V+TYN  I G+C   D  EA+ L  EM +QG  PNV T+
Sbjct: 359 GNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 418

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++M        +  A +  + M+  G++P+ F YNT +    + G + RA EL   +  
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLML 478

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ILI+G CK   ++ A  L  +M+S G++P  +TY  L     E   +  
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K+F+ M   G+      +   I   C+ G +  A   FR +     E +  +Y+ LI 
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LC+ GR ++A   FH +    L+A+  TY ++I   C  G  + A   + +M   G+ P
Sbjct: 599 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 658

Query: 374 DCVAFNTLMLG 384
           D +    L+ G
Sbjct: 659 DYLTHKALVKG 669



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 3/315 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M    + PDV   N V+R    A   ++   +  EM+  G++P++VT++ ++D   K G
Sbjct: 159 EMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218

Query: 145 KMEEASQLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
           + ++ + LL+ M     G  PN   YN ++ G    G +  A EL   M  +  K + F+
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFT 277

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI G      ++    L  EM ++GI PTVVTYN +  GL +   VE A   F EM+
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 337

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             G+  D   Y + ++G CK G + EAL LF  LR       + +Y+  IDG C+ G L+
Sbjct: 338 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLE 397

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  L   +     + +V TY I++        +  A + F +M +KG+ PDC A+NT +
Sbjct: 398 EARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI 457

Query: 383 LGCIRNNETSKVVEL 397
              +   + ++ +EL
Sbjct: 458 CAELILGDIARALEL 472



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 5/272 (1%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM   GV P+V   + ++  L    + ++   + E M+Q+G+ P+   YNTL+D F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 178 TGRVNRAKELFVSMESM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPT 234
            GR ++   L   ME+   GC  N  +Y+++I G  +  ++E A  L   M LSK  K +
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 274

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TYN L  GL     V++ + L  EM+  G+      Y   I GL ++G +  A   F 
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R +    D+ +Y+ L++G CK+G LK A  LF  L R  L   V+TYNI I   C  G
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            +++A  L  +M  +G  P+   +  LM G +
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSL 426



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 6/197 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   + +TY+ LI+GLC+TG+   A  L  +M++ NG      +PD + YT +I   C+ 
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS-NG-----LQPDCITYTCLIHAHCER 533

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A+++   M    + P  VT+  +I  +C   +   A   F +M+++GV+PN +T+
Sbjct: 534 GLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 593

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V++  LC+ G+ + AS     M++ G+  N + Y  L+DG C  G    A   +  M  
Sbjct: 594 NVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQ 653

Query: 194 MGCKHNVFSYSILINGY 210
            G   +  ++  L+ G+
Sbjct: 654 NGIHPDYLTHKALVKGF 670



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 38/202 (18%)

Query: 220 LSLYSEMLSKG-----------------------------------IKPTVVTYNTLFIG 244
           LS + EM S G                                   I+P++VTYNTL   
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 245 LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             +  + ++   L  EM+  G     +   Y   I GL + G + EA EL   +R+ K +
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 272

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +Y+ LI GL   G +K  ++L   +    ++  VVTYN MIH L   G ++ A   
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F +M A G+ PD + +N+L+ G
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNG 354



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F K+   G EPN ITY+ LI+ LCR G T +A + F EM+    E G+V   +   
Sbjct: 574 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML----ERGLVA--NKYT 627

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
           YT +IDG CK G  + A     +M    I+PD +T+ ++++GF
Sbjct: 628 YTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  + + G  P+ +T++ +I+  CR G+   A   F +M+    E GV  +P+ +
Sbjct: 538 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML----EEGV--EPNEI 591

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC+ G    A     +M ++ +  +  TY  +I G C   +  +A R + EM
Sbjct: 592 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM 651

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              G+ P+ +T   ++     +G +    + L+++I
Sbjct: 652 HQNGIHPDYLTHKALVKGF--DGHVHHTIEYLDIVI 685


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 211/405 (52%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
            AA    +++  G + N++ Y  +++G CR G T VA  L   + + G         P+ 
Sbjct: 182 HAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKG-------LSPNV 234

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V YT ++ G CKEG +++A++++ ++K+ + I  D V Y ++I G+C      +A R+  
Sbjct: 235 VTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRD 294

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+D GVQ N+  ++ +++  CK G+M E  +LL+     GV  + + YNTL+DG+C  G
Sbjct: 295 EMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKG 354

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            + +A E    M   G      +Y+ L+NG+C    I+ AL L+  ML +G+ P  ++ +
Sbjct: 355 FMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCS 414

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G F+  + E+A  L+ E    G+A +     T I+GLCKN  + EA ELF  ++  
Sbjct: 415 TLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEW 474

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C  D  +Y  LIDG CK G L  A ++   +     +  V  +N  I  L    +  K 
Sbjct: 475 SCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKV 534

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D+ ++M AKG++P+ V +  L+ G  +         L   M E+
Sbjct: 535 NDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEK 579



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 203/426 (47%), Gaps = 32/426 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ +  A G   NV+T +T+INGLC+      A  LF  M   +      C  D++
Sbjct: 428 QALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS------CPCDSL 481

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK G + +A ++ ++M++    P V  +NS I G   A  S +   + +EM
Sbjct: 482 TYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEM 541

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN VT+  ++   CK G + +A  L   M++ G++PN F+ + L+  F   G+V
Sbjct: 542 SAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601

Query: 182 NRAKELFVSM-----------------------ESM-GCKHNV--FSYSILINGYCKNKE 215
           + A  +   +                       ES+ G  H      ++I+I G CK   
Sbjct: 602 DEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGR 661

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A +L+ ++  KG  P   TY++L  G      ++ AF L DEM    +  +   Y +
Sbjct: 662 VADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNS 721

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I GLCK+  +  A+ LF  L+      +  +Y+ LIDG CK G    A++L   + +  
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +   V TY I+IH LC  G M++A  L   M    V P+ + + TL+ G  R      + 
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAIT 841

Query: 396 ELLHRM 401
           +L + M
Sbjct: 842 KLYNEM 847



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 201/398 (50%), Gaps = 32/398 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++K + C  + +TY TLI+G C+ G    A  +  EM N     G V  P   
Sbjct: 463 EAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN----LGFV--PSVE 516

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ + I GL       K  ++ ++M  K ++P+ VTY ++I G+C   + ++A  L+ EM
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-----MIQ--------IGV------- 161
           +++G++PN+   SV++    + GK++EA+ +L+      MIQ        IG        
Sbjct: 577 VEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIES 636

Query: 162 ------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                 +    ++N ++ G C  GRV  A+ LF  ++  G   + F+YS LI+G   +  
Sbjct: 637 LAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGS 696

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A  L  EMLS  + P +VTYN+L  GL +   V RA  LF+++Q  G++ +   Y T
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDG CK+G   EA +L + +     +  + +Y+ LI GLC  G ++ A +L   +    
Sbjct: 757 LIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENN 816

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           +  + +TY  +I      G M     L+ +M   G+ P
Sbjct: 817 VDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 205/442 (46%), Gaps = 67/442 (15%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           +Y+TL++G CR G    A    + M+  NG  G       + Y T+++G C  G +D A 
Sbjct: 342 SYNTLVDGYCRKGFMTKAFETCDMMVR-NGFTGTT-----LTYNTLLNGFCSRGAIDDAL 395

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +L   M  + + P+ ++ ++++ GF  A  + +A  L+ E + +G+  NVVT + +++ L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM------ 194
           CKN +M EA +L   M +     ++  Y TL+DG+C  G + RA ++ + ME++      
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 195 -----------------------------GCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
                                        G   N  +Y  LI G+CK   +  A  LY E
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA------------- 272
           M+ KG+KP +   + L    +   +V+ A  +  ++    +  D  A             
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635

Query: 273 -------------YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
                        +   I GLCK G + +A  LF  L++     D  +YS LI G   SG
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            + +A+ L   +    L  ++VTYN +I+ LC    + +A  LF  +++KG++P+ + +N
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
           TL+ G  ++  T++  +L  +M
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKM 777



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 5/362 (1%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           VA  LF +++    +F       A  +  ++      G +  A  +  +M        + 
Sbjct: 75  VAPTLFPDLVEVYKDFSF----SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLR 130

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           + N ++     A D   A  +F +M   G  P+  T +++    C++G++  A+  L+ M
Sbjct: 131 SCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEM 190

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            ++G+  N   Y+ +MDG+C  G+   A++L  S++  G   NV +Y++L+ GYCK   +
Sbjct: 191 EEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRM 250

Query: 217 EGALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           E A  +  E+  ++ I    V Y  L  G  +  ++E A ++ DEM   GV  + + Y T
Sbjct: 251 EEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNT 310

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+G CK G + E  +L +        LD  SY+ L+DG C+ G +  A+E    + R  
Sbjct: 311 MINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG 370

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
                +TYN +++  C+ G +D A  L+  M  +GV P+ ++ +TL+ G  +  +T + +
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 396 EL 397
            L
Sbjct: 431 NL 432



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 6/232 (2%)

Query: 40  NLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
           ++ E +  GN +         +++  +I GLCK G V  A+ L   +K K   PD  TY+
Sbjct: 632 HIIESLAGGNHQSA------KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYS 685

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           S+I G   +   + A  L  EM+   + PN+VT++ ++  LCK+  +  A  L   +   
Sbjct: 686 SLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSK 745

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ PNA  YNTL+DG C  G    A +L   M   G +  VF+Y+ILI+G C    +E A
Sbjct: 746 GISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEA 805

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           + L  +M+   + P  +TY TL  G      ++   KL++EM   G+    W
Sbjct: 806 IKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANW 857



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 6/144 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +LF KL++ G  PN ITY+TLI+G C+ G+T  A  L ++MI    + G+  +P   
Sbjct: 734 RAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI----KEGI--QPTVF 787

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLC +G++++A +LL QM + N++P+ +TY ++I+G+    +     +L+ EM
Sbjct: 788 TYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847

Query: 122 MDQGVQPNVVTFSVIMDELCKNGK 145
              G+ P   T  V   E   N K
Sbjct: 848 HICGLLPANWTGHVKQAEPVVNSK 871



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%)

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + +AL +F  +        +RS + L++ L ++G +  A  +F  +     + D  T 
Sbjct: 108 GQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTV 167

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            IM  A C DG++  A D   +ME  G+  + VA++ +M G  R  +T    +LLH + 
Sbjct: 168 AIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQ 226


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF + ++ G  PN+ T + LIN  C   H   A ++F  ++           PDA+   
Sbjct: 114 SLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYH------PDAITLN 167

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC  G + +A     ++  +    D V+Y ++I G C A ++    RL  ++   
Sbjct: 168 TLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 227

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV ++ I+  LCKN ++ +A  L   MI  G+ PN F YNTL+ GFC+ G +  A
Sbjct: 228 SVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEA 287

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M+      +V++++ILI+   K  +I+ A+SL+ EM  K + P +VTY +L  G
Sbjct: 288 FSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDG 347

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L + H +ERA  L  +M+  G+  D ++Y   +D LCK G +  A + F+ L +    L+
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 407

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y+ +I+GLCK+G      +L   +     + D +T+  +I AL    + DKA     
Sbjct: 408 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLR 467

Query: 365 DMEAKGV 371
           +M A+G+
Sbjct: 468 EMIARGL 474



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 204/403 (50%), Gaps = 8/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A F ++      P    +  +++ L +  H +  ++LF++    NG       P+   
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQF-QSNG-----VTPNLCT 130

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              +I+  C    +  A  +   +  +  +PD +T N++I+G C+  +   A     +++
Sbjct: 131 LNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVV 190

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG Q + V++  +++ LCK G+ +  ++LL  +    V+P+  +Y T++   C   RV 
Sbjct: 191 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L+  M   G   NVF+Y+ LI G+C    ++ A SL +EM  K I P V T+N L 
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +++ A  LF+EM+   +  +   Y + IDGLCKN ++  A+ L + ++    +
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            D+ SY+ L+D LCK GRL+ A + F H L +G  + +V TYN+MI+ LC  G      D
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHL-NVRTYNVMINGLCKAGLFGDVMD 429

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME KG  PD + F T++      +E  K  + L  M  R
Sbjct: 430 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIAR 472



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 6/230 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++   G  PNV TY+TLI G C  G+   A +L  EM   N        PD  
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKN------INPDVY 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID L KEG +D+A  L  +MK KN+ P++VTY S+I G C  +    A  L  +M
Sbjct: 305 TFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+QP+V ++++++D LCK G++E A Q  + ++  G   N   YN +++G C  G  
Sbjct: 365 KEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
               +L   ME  GC  +  ++  +I    +  E + A     EM+++G+
Sbjct: 425 GDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 117/250 (46%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P  F ++ ++              LF   +S G   N+ + +ILIN +C    
Sbjct: 84  MLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAH 143

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I  A S+++ +L +G  P  +T NTL  GL    +++RA    D++   G   D  +Y T
Sbjct: 144 ITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGT 203

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+GLCK G       L R L     + D+  Y+ +I  LCK+ R+  A +L+  +    
Sbjct: 204 LINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKG 263

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  +V TYN +I+  C  G + +A  L  +M+ K + PD   FN L+    +  +  + +
Sbjct: 264 ISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAI 323

Query: 396 ELLHRMDERN 405
            L   M  +N
Sbjct: 324 SLFEEMKHKN 333


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 218/406 (53%), Gaps = 10/406 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   + K+++ G  P+V    T+I G  +      AL LF+E      E G+    +  
Sbjct: 391 KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF----ETGLA---NVF 443

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I  TI+  LCK+G +DKA ELL +M+ + I P+VV+YN+V+   C   + + A+ +F  M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++PN  T+S+++D   KN   +   +++  M    +  N  VY T+++G C  G+ 
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563

Query: 182 NRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++A+EL  +M  E   C  +  SY+ +I+G+ K  E++ A++ Y EM + GI P V+TY 
Sbjct: 564 SKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  GL + +++++A ++ DEM+  GV  D  AY   I G CK   +  A  LF  L   
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE 682

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                   Y+ LI G    G +  A +L+  + +  L  D+ TY  +I  L  +G +  A
Sbjct: 683 GLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILA 742

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DL+ +M+A G+ PD + +  ++ G  +  +  KVV++   M + N
Sbjct: 743 SDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNN 788



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 206/386 (53%), Gaps = 7/386 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+++ G  PNV++Y+ ++   CR  +  +A  +F  M+    E G+  KP+  
Sbjct: 460 KATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML----EKGL--KPNNY 513

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K        E++ QM   NI  + V Y ++I G C    +++A+ L   M
Sbjct: 514 TYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 573

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++     + ++++ I+D   K G+M+ A    E M   G+ PN   Y +LMDG C   R
Sbjct: 574 IEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A E+   M++ G K ++ +Y  LI+G+CK   +E A +L+SE+L +G+ P+   YN+
Sbjct: 634 MDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNS 693

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L+ +M + G+  D   Y T IDGL K G ++ A +L+  ++ + 
Sbjct: 694 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVG 753

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D   Y+ +++GL K G+     ++F  + +  +  +V+ YN +I     +G +D+A 
Sbjct: 754 LVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 813

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCI 386
            L  +M  KG+ PD   F+ L+ G +
Sbjct: 814 RLHDEMLDKGILPDGATFDILVSGKV 839



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 212/428 (49%), Gaps = 43/428 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F++    G EP+ + YS  +   C+T +  +A +L  EM         +C P   
Sbjct: 250 EALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKK-----LCVPSQE 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I    K+G ++ A     +M    I+ +VV   S+I G C  ND   A  LF +M
Sbjct: 305 TYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------------ 163
            ++G  PN VTFSV+++   KNG+ME+A +  + M  +G+ P                  
Sbjct: 365 ENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKH 424

Query: 164 ----------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                           N F+ NT++   C  G++++A EL   MES G   NV SY+ ++
Sbjct: 425 EEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVM 484

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             +C+ K ++ A +++S ML KG+KP   TY+ L  G F+ H  +   ++ ++M    + 
Sbjct: 485 LAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILK--CELDIRSYSCLIDGLCKSGRLKIAW 325
            +   Y+T I+GLCK G   +A EL   +   K  C +   SY+ +IDG  K G +  A 
Sbjct: 545 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC-VSCMSYNSIIDGFIKEGEMDYAV 603

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG- 384
             +  +    +  +V+TY  ++  LC + +MD+A ++  +M+ KGV  D  A+  L+ G 
Sbjct: 604 AAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGF 663

Query: 385 CIRNNETS 392
           C ++N  S
Sbjct: 664 CKKSNMES 671



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 20/407 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L    K FG E N   ++ L+N   +   T  A+++  +M+    E GV+  P       
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQML----ELGVI--PFVPYVNR 202

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            +  L +   + +AKEL  +M    ++ D  T   ++R         EA  +F   +++G
Sbjct: 203 TLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERG 262

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRA 184
            +P+ + +S+ +   CK   +  A+ LL  M +  +  P+   Y +++      G +  A
Sbjct: 263 AEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDA 322

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
                 M S G   NV + + LI G+CKN ++  AL L+ +M ++G  P  VT++ L   
Sbjct: 323 IRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIER 382

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT------LRI 298
             +  ++E+A + + +M+  G+    +   T I G  K     EAL+LF          +
Sbjct: 383 FSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV 442

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C       + ++  LCK G++  A EL   +    +  +VV+YN ++ A C    MD 
Sbjct: 443 FIC-------NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDL 495

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A  +F +M  KG+ P+   ++ L+ GC +N++   V+E++++M   N
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 133/255 (52%), Gaps = 6/255 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A + ++ A G  PNVITY++L++GLC+      AL + +EM N     GV  K D   
Sbjct: 602 AVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK----GV--KLDIPA 655

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I G CK+  ++ A  L  ++ ++ +NP    YNS+I GF    +   A  L+ +M+
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G++ ++ T++ ++D L K G +  AS L   M  +G+ P+  +Y  +++G    G+  
Sbjct: 716 KDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFV 775

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  ++F  M+      NV  Y+ +I G+ +   ++ A  L+ EML KGI P   T++ L 
Sbjct: 776 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 835

Query: 243 IGLFEIHQVERAFKL 257
            G     Q  RA  L
Sbjct: 836 SGKVGKFQPIRAASL 850


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 216/450 (48%), Gaps = 58/450 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F ++++ GC PNV+TY+ L++   ++   I A ++F  M++        C P+AV
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA------ACYPNAV 558

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN----------------INPDVVTYNSVIRGF 105
            Y+ +IDGLCK G + KA E+  ++   +                I P+VVTY ++I G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C A   ++A  L   M+  G +PN + +  ++D  CK GK++ A ++   M + G  P+ 
Sbjct: 619 CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSV 678

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y +L+D     GR++ A ++   M +  C  NV +Y+ +I+G  K  EIE AL+L S 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSL 738

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  KG  P VVTY  L  GL +  + + + KLF +M   G A +   YR  I+  C  G 
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGL 798

Query: 286 IVEALELFRTLRILKCELDIRSYSC---------------------------------LI 312
           + EA  L   ++       ++ Y C                                 LI
Sbjct: 799 LDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLI 858

Query: 313 DGLCKSGRLKIAWELFHSL---PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           D   K+GRL+ A EL   L      + +     Y  +I ALC   ++++A  L+ +M  K
Sbjct: 859 DSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           G+ PD + F +L+ G I  N+  + ++L +
Sbjct: 919 GIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 189/370 (51%), Gaps = 22/370 (5%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  TY+ +I  LC+      +  LF+EM       GV   PD   YT +ID  CK 
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA----GV--NPDVYTYTILIDSFCKA 500

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++A+    +M+    +P+VVTY +++  +  +    +A  +F  M+D    PN VT+
Sbjct: 501 GLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTY 560

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIG----------------VRPNAFVYNTLMDGFCL 177
           S ++D LCK G++++A ++ E +I                   + PN   Y  L+DG C 
Sbjct: 561 SALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCK 620

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +V+ A EL  +M + GC+ N   Y  LI+G+CK  +I+ A  ++  M   G  P+V T
Sbjct: 621 AQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHT 680

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y +L   +F+  +++ A K+  EM       +   Y   IDGL K G I +AL L   + 
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLME 740

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C  ++ +Y+ LIDGL K+G+   + +LF  +       + VTY ++I+  CA G +D
Sbjct: 741 EKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLD 800

Query: 358 KAHDLFLDME 367
           +AH L  +M+
Sbjct: 801 EAHLLLDEMK 810



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 201/444 (45%), Gaps = 55/444 (12%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------INGNGEFGVVCKPDAVIYT 64
           GC PN   +++L++G C  G    A  LF  M         +  N   G +C  + +   
Sbjct: 336 GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395

Query: 65  TIID--------------------------GLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
            ++D                           LC  G  +KA ++L +M  K   PD  TY
Sbjct: 396 ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTY 455

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
             VI   C A    ++  LF EM   GV P+V T+++++D  CK G +E+A    + M  
Sbjct: 456 TKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 515

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G  PN   Y  L+  +  + ++ +A ++F  M    C  N  +YS LI+G CK  EI+ 
Sbjct: 516 VGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQK 575

Query: 219 ALSLYSEMLSKG----------------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           A  +Y +++                   I P VVTY  L  GL +  +V  A +L D M 
Sbjct: 576 ACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAML 635

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGR 320
             G   +   Y   IDG CK G I  A E+F  LR+ KC     + +Y+ LID + K GR
Sbjct: 636 AAGCEPNQIVYDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGR 693

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L +A ++   +       +VVTY  MI  L   G+++KA +L   ME KG +P+ V +  
Sbjct: 694 LDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTA 753

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G  +  +    ++L  +M+ +
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSK 777



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 190/396 (47%), Gaps = 22/396 (5%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++ A  C  N +  +     LC  G    A  + +EM+      G V  PD   YT 
Sbjct: 404 VYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK----GFV--PDTSTYTK 457

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC+   V+K+  L  +MK   +NPDV TY  +I  FC A    +A+  F EM   G
Sbjct: 458 VITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVG 517

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNVVT++ ++    K+ ++ +A  +   M+     PNA  Y+ L+DG C  G + +A 
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKAC 577

Query: 186 ELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           E++  +                ++     NV +Y  LI+G CK +++  A  L   ML+ 
Sbjct: 578 EVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA 637

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +P  + Y+ L  G  +I +++ A ++F  M + G       Y + ID + K+G +  A
Sbjct: 638 GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           +++   +    C  ++ +Y+ +IDGL K G ++ A  L   +       +VVTY  +I  
Sbjct: 698 MKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDG 757

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           L   GK D +  LF  M +KG AP+ V +  L+  C
Sbjct: 758 LGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 193/457 (42%), Gaps = 66/457 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     +LK FG  P+ +TY+ L+  L   G   +   + +EM + +G     C   + 
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEM-SASG----FCMDRST 241

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I       LCK G   +  + L  ++ ++ N D V    +I G   A+  NEA      M
Sbjct: 242 I-GYFAQALCKVG---RWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNVVT+  ++    K  +     +++ +M+  G  PN  ++N+L+ G+C  G  
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI------------------------- 216
             A +LF  M + G      +Y+I I   C  +E+                         
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK 417

Query: 217 ----------------EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
                           E A  +  EM+ KG  P   TY  +   L +  +VE++F LF E
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+R GV  D + Y   ID  CK G I +A   F  +R + C  ++ +Y+ L+    KS +
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-----------LDMEAK 369
           L  A ++FH +       + VTY+ +I  LC  G++ KA +++            D   +
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 370 G-----VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G     +AP+ V +  L+ G  +  + S   ELL  M
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 152/313 (48%), Gaps = 45/313 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  P+V TY++LI+ + + G   +A+ +  EM+N +      C P+ V 
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS------CNPNVVT 715

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDGL K G ++KA  LL  M++K  +P+VVTY ++I G      ++ + +LF +M 
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM------------------------IQ 158
            +G  PN VT+ V+++  C  G ++EA  LL+ M                          
Sbjct: 776 SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIAS 835

Query: 159 IGVR---------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---YSIL 206
           +G+          P A VY  L+D F   GR+  A EL   +  +    N+ S   Y+ L
Sbjct: 836 LGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASL 895

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I   C   ++E A +LY+EM  KGI P ++ + +L  GL E+++ + A +L       GV
Sbjct: 896 IQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955

Query: 267 AADTWAYRTFIDG 279
               W      DG
Sbjct: 956 ---NWQDNKSFDG 965



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 160/405 (39%), Gaps = 75/405 (18%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G  D+A E L ++KD    P  VTYN++++    A       R+  EM   G   + 
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 131 VTFSVIMDELCKNGKMEEASQLLE---------LMIQI---------------------- 159
            T       LCK G+  +A  +LE         L  Q+                      
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299

Query: 160 -GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               PN   Y TL+ GF    +    K +   M + GC  N   ++ L++GYC   +   
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIG---------------------------------- 244
           A  L++ M + G  P  V YN +FIG                                  
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYN-IFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKV 418

Query: 245 --------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
                   L  + + E+AF++  EM R G   DT  Y   I  LC+   + ++  LF+ +
Sbjct: 419 NTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEM 478

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      D+ +Y+ LID  CK+G ++ A   F  +       +VVTY  ++HA     ++
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +AHD+F  M      P+ V ++ L+ G  +  E  K  E+  ++
Sbjct: 539 IQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 7/200 (3%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           ++L+   C++   + AL     +   G +P+ VTYN L   L    QVE  F++  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRL 321
            G   D      F   LCK G   +AL +       K + ++ +  C  +I GL ++   
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLE-----KEDFNLDTVLCTQMISGLMEASLF 287

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A    H +     I +VVTY  ++       +      +   M  +G  P+   FN+L
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G     + +   +L +RM
Sbjct: 348 VHGYCNAGDYAYAYKLFNRM 367


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 205/395 (51%), Gaps = 6/395 (1%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  +   G +PNV+T+STLI+  C+ G+   A  LF+ M  GNG       PD ++Y+ +
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVM-AGNG-----VTPDLIVYSIL 348

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           IDGL K G ++  + LLL   DK I  DVV ++S +  +    D     +++  M+++G+
Sbjct: 349 IDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGI 408

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            PNVV+ S+++   C+NG++ EA  L   ++++G  P+   Y+ L+ GFC +G +     
Sbjct: 409 SPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFY 468

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L+  M    C+ +   YS+LING CK   +  AL  + + +++G+ P V T NTL     
Sbjct: 469 LYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFC 528

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
            +  +  A K++  M    + ADT  Y   I G  + G + EAL LF  +     + D+ 
Sbjct: 529 RLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVI 588

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y  LIDGLCK  +      +F  + +  +  D+  YN++I+    +G ++ A  LF+ +
Sbjct: 589 TYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHV 648

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +G  PD   FNT++            V+L  +M
Sbjct: 649 VERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 209/402 (51%), Gaps = 7/402 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G EP+++TYS LI G C++G+      L+E+MI         C+PD 
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR------CEPDT 482

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y+ +I+GLCK+G V  A     Q  ++ ++P+V T N+++  FC       A +++  
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++ + VT+++++    + G+++EA  L   M++   +P+   Y TL+DG C   +
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +    +F  M       ++  Y++LIN + +   +E AL L+  ++ +G KP V T+NT
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +        +++ A +LF +M    +  +   +   ID  C+ G + +A+ +F  +    
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722

Query: 301 CELDIRSYSCLIDGLCKS-GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E ++ +YSCLI G  KS   ++   +L++ +    +  ++V+Y+I+I  LC  G M +A
Sbjct: 723 PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEA 782

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              F     K + PD +A+  L+ G  +    ++ + L   M
Sbjct: 783 SCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 217/434 (50%), Gaps = 30/434 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH-------TIVALNL--------FEEMI 46
           +A  LF  +   G  P++I YS LI+GL + G         +VAL+         F   +
Sbjct: 325 KAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAM 384

Query: 47  NGN---GEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +     G+ G V +           P+ V  + +I G C+ G + +A  L +Q+      
Sbjct: 385 DAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFE 444

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P ++TY+++I GFC + +  +   L+ +M+ +  +P+ + +SV+++ LCK G + +A + 
Sbjct: 445 PSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRF 504

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
               +  G+ PN F  NTL+D FC    +  A +++  M  +  K +  +Y+ILI G  +
Sbjct: 505 FFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQ 564

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL L+ +ML K  KP V+TY TL  GL ++ +      +FD M ++ VA D   
Sbjct: 565 FGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAI 624

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+   + G++  AL LF  +     + D+ +++ +I   C   RL  A +LF  + 
Sbjct: 625 YNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMT 684

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              L  + +T+ I+I A C +G+MD A  +F  M  +G  P+ V ++ L+ G  ++    
Sbjct: 685 SEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMM 744

Query: 393 KV-VELLHRMDERN 405
           +  ++L + M E N
Sbjct: 745 ESGLKLYNEMLENN 758



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 188/372 (50%), Gaps = 6/372 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
            Y  ++N     G   + L   + ++ G   FG+    D +    I+ G+  +  +  A 
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGG--FGL----DIITCNKILKGIWMQNDIGVAD 292

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +    +      P+VVT++++I  +C   + ++A  LF  M   GV P+++ +S+++D L
Sbjct: 293 DYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGL 352

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            K G++E+  +LL + +  G++ +   +++ MD +   G + R  +++  M + G   NV
Sbjct: 353 FKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNV 412

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            S SILI G+C+N  I  A  L+ ++L  G +P+++TY+ L  G  +   +   F L+++
Sbjct: 413 VSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYED 472

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M +     DT  Y   I+GLCK G + +AL  F          ++ + + L+D  C+   
Sbjct: 473 MIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKC 532

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A ++++ +    + AD VTY I+I      G++D+A  LF  M  K   PD + + T
Sbjct: 533 IVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCT 592

Query: 381 LMLGCIRNNETS 392
           L+ G  +  ++S
Sbjct: 593 LIDGLCKLKKSS 604



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 163/358 (45%), Gaps = 35/358 (9%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI--NPDVV--------------------- 96
           +V+Y  +I+  C++G  DK+ ++ + +  K I  +P+VV                     
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226

Query: 97  ------------TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
                        Y  V+  F    +     R    ++  G   +++T + I+  +    
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            +  A     ++++IG +PN   ++TL+D +C  G +++A  LF  M   G   ++  YS
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILI+G  K   +E    L    L KGIK  VV +++      +I  + R  +++  M   
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G++ +  +    I G C+NG I+EA  LF  +  L  E  I +YS LI G CKSG L+  
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           + L+  + +     D + Y+++I+ LC  G +  A   F     +G++P+    NTL+
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 7/171 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+ +    PN IT++ LI+  CR G    A+ +F +M+    E      P+ V
Sbjct: 675 DAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE------PNLV 728

Query: 62  IYTTIIDGLCK-EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y+ +I G  K +  ++   +L  +M + NI P++V+Y+ +I G C      EA   F  
Sbjct: 729 TYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRC 788

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            +D+ + P+V+ +++++   CK G++ EA  L + M+   + P+ F+  TL
Sbjct: 789 ALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 8/242 (3%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELF--VSMESMGCKHNVFSYSI--LINGYCKNKEIEGA 219
           ++ VY  L++ +C  G  +++ ++F  V ++ +    NV    +  LI+ +C    +E  
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHC----VEVI 221

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           +  Y E+ S   +     Y  +        +VE   +    + + G   D       + G
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           +     I  A + F  +  +  + ++ ++S LID  CK G L  A+ LF  +    +  D
Sbjct: 282 IWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           ++ Y+I+I  L   G+++    L L    KG+  D V F++ M   ++  +  +V+++  
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 400 RM 401
           RM
Sbjct: 402 RM 403


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 207/397 (52%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +++  G +PNV T++  I  L R G    A  + + M +        C PD V YT
Sbjct: 246 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 299

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +ID LC    +D AKE+  +MK     PD VTY +++  F    D +   + + EM   
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VVTF++++D LCK G   EA   L++M   G+ PN   YNTL+ G     R++ A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E+F +MES+G K   ++Y + I+ Y K+ +   AL  + +M +KGI P +V  N     
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 479

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  +   A ++F  ++  G+  D+  Y   +    K G I EA++L   +    CE D
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LI+ L K+ R+  AW++F  +    L   VVTYN ++  L  +GK+ +A +LF 
Sbjct: 540 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 599

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M  KG  P+ + FNTL     +N+E +  +++L +M
Sbjct: 600 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 30/415 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  +  ++   GC P+V+TY+ LI+ LC       A  +F +M  G             
Sbjct: 278 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLL 337

Query: 49  -----NGEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                N +   V +           PD V +T ++D LCK G   +A   L  M+D+ I 
Sbjct: 338 DRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGIL 397

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++ TYN++I G    +  ++A  +F  M   GV+P   T+ V +D   K+G    A + 
Sbjct: 398 PNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 457

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M   G+ PN    N  +      GR   AK++F  ++ +G   +  +Y++++  Y K
Sbjct: 458 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             EI+ A+ L SEM+    +P V+  N+L   L++  +V+ A+K+F  M+   +      
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL KNG I EA+ELF  +    C  +  +++ L D LCK+  + +A ++   + 
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
               + DV TYN +I  L  +G++ +A   F  M+ K V PD V   TL+ G ++
Sbjct: 638 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVK 691



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 199/402 (49%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     K++ FG   N  +Y+ LI+ L ++     A+ ++  MI          +P   
Sbjct: 173 QAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG------FRPSLQ 226

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++++ GL K   ++    LL +M+   + P+V T+   IR    A   NEA  +   M
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VVT++V++D LC   K++ A ++   M     +P+   Y TL+D F     +
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   + +  ME  G   +V +++IL++  CK      A +    M  +GI P + TYNTL
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +H+++ A ++FD M+  GV    + Y  FID   K+G  V ALE F  ++    
Sbjct: 407 ICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 466

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I + +  +  L K+GR + A ++F+ L    L+ D VTYN+M+      G++D+A  
Sbjct: 467 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 526

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M      PD +  N+L+    + +   +  ++  RM E
Sbjct: 527 LLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 568



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 178/344 (51%), Gaps = 9/344 (2%)

Query: 3    AAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF K  K  G +P + TY+ LI GL       +A ++F ++ N        C PD  
Sbjct: 770  ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG------CIPDVA 823

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  ++D   K G +D+  E+  +M      P+ +T+N VI G   A + ++A  L+ ++
Sbjct: 824  TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883

Query: 122  M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M D+   P   T+  ++D L K+G++ EA QL E M   G RPN  +YN L++GF   G 
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             + A  LF  M   G + ++ +YS+L++  C    ++  L  + E+   G+ P VV YN 
Sbjct: 944  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003

Query: 241  LFIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  GL + H++E A  LF+EM++  G+  D + Y + I  L   G + EA +++  ++  
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 300  KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
              E ++ +++ LI G   SG+ + A+ ++ ++  G    +  TY
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 217/444 (48%), Gaps = 46/444 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A   F K+K  G  PN++  +  +  L + G    A  +F     G  + G+V  PD+
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY----GLKDIGLV--PDS 505

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  ++    K G +D+A +LL +M +    PDV+  NS+I     A+  +EA ++F+ 
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +  ++P VVT++ ++  L KNGK++EA +L E M+Q G  PN   +NTL D  C    
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++   M  MGC  +VF+Y+ +I G  KN +++ A+  + +M  K + P  VT  T
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 684

Query: 241 LFIGLFEIHQVERAFK---------------LFDEMQRHGVAAD-------TWAYRTFID 278
           L  G+ +   +E A+K               LF E     + A+       +++ R   +
Sbjct: 685 LLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVAN 744

Query: 279 GLCKNGYIV---------------EALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLK 322
           G+C++G  +                A  LF    + L  +  + +Y+ LI GL ++  ++
Sbjct: 745 GICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 804

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           IA ++F  +     I DV TYN ++ A    GK+D+  +++ +M A    P+ +  N ++
Sbjct: 805 IAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVI 864

Query: 383 LGCIRNNETSKVVELLHR-MDERN 405
            G ++       ++L +  M +R+
Sbjct: 865 SGLVKAGNVDDALDLYYDLMSDRD 888



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 194/383 (50%), Gaps = 24/383 (6%)

Query: 18   NVITYST--LINGLCRTGHTIV---------------ALNLFEEMINGNGEFGVVCKPDA 60
            N +++S   + NG+CR G +I+               A  LFE+      + GV  +P  
Sbjct: 733  NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTK---DLGV--QPKL 787

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  +I GL +   ++ A+++ LQ+K+    PDV TYN ++  +  +   +E   ++ E
Sbjct: 788  PTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKE 847

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M     +PN +T ++++  L K G +++A  L  +LM      P A  Y  L+DG   +G
Sbjct: 848  MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 907

Query: 180  RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            R+  AK+LF  M   GC+ N   Y+ILING+ K  E + A +L+  M+ +G++P + TY+
Sbjct: 908  RLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 967

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             L   L  + +V+     F E++  G+  D   Y   I+GL K   + EAL LF  ++  
Sbjct: 968  VLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKS 1027

Query: 300  K-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    D+ +Y+ LI  L  +G ++ A ++++ + R  L  +V T+N +I      GK + 
Sbjct: 1028 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1087

Query: 359  AHDLFLDMEAKGVAPDCVAFNTL 381
            A+ ++  M   G +P+   +  L
Sbjct: 1088 AYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 211/442 (47%), Gaps = 48/442 (10%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF  +   GC PN IT++TL + LC+     +AL +  +M++      + C PD  
Sbjct: 593  EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD------MGCVPDVF 646

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------F 105
             Y TII GL K G V +A     QMK K + PD VT  +++ G                F
Sbjct: 647  TYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANF 705

Query: 106  CYANDSNEAKRLFIEMM-----DQGVQPNVVTFS--VIMDELCKNG-------------- 144
             Y+     A   + ++M     + G+  N V+FS  ++ + +C++G              
Sbjct: 706  LYSCADQPANLFWEDLMGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSFKH 764

Query: 145  -KMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                 A  L E   + +GV+P    YN L+ G      +  A+++F+ +++ GC  +V +
Sbjct: 765  NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVAT 824

Query: 203  YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-DEM 261
            Y+ L++ Y K+ +I+    +Y EM +   +P  +T+N +  GL +   V+ A  L+ D M
Sbjct: 825  YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884

Query: 262  QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
                 +     Y   IDGL K+G + EA +LF  +    C  +   Y+ LI+G  K+G  
Sbjct: 885  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944

Query: 322  KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
              A  LF  + +  +  D+ TY++++  LC  G++D+    F +++  G+ PD V +N +
Sbjct: 945  DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004

Query: 382  MLGCIRNNETSKVVELLHRMDE 403
            + G  + +   + + L + M +
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKK 1026



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 200/421 (47%), Gaps = 47/421 (11%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A  +  K+   GC P+V TY+T+I GL + G    A+  F +M         +  PD V 
Sbjct: 629  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 681

Query: 63   YTTIIDGLCKEGFVDKAKEL----LLQMKDKNIN----------------PDVVTYNS-- 100
              T++ G+ K G ++ A ++    L    D+  N                 + V+++   
Sbjct: 682  LCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERL 741

Query: 101  VIRGFCYANDS---------------NEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNG 144
            V  G C   DS               + A+ LF +   D GVQP + T+++++  L +  
Sbjct: 742  VANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 801

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             +E A  +   +   G  P+   YN L+D +  +G+++   E++  M +  C+ N  +++
Sbjct: 802  MIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHN 861

Query: 205  ILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            I+I+G  K   ++ AL LY +++S +   PT  TY  L  GL +  ++  A +LF+ M  
Sbjct: 862  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSD 921

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            +G   +   Y   I+G  K G    A  LF+ +       D+++YS L+D LC  GR+  
Sbjct: 922  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 981

Query: 324  AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLM 382
                F  L    L  DVV YN++I+ L    ++++A  LF +M +++G+ PD   +N+L+
Sbjct: 982  GLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI 1041

Query: 383  L 383
            L
Sbjct: 1042 L 1042



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 37/418 (8%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVA----------LNLFEEMI 46
            EA   F ++K     P+ +T  TL+ G+ + G     + I+A           NLF E +
Sbjct: 663  EAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDL 721

Query: 47   NGN--GEFGV--------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDK 89
             G+   E G+              +C+    I   II    K      A+ L  +  KD 
Sbjct: 722  MGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDL 781

Query: 90   NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
             + P + TYN +I G   A+    A+ +F+++ + G  P+V T++ ++D   K+GK++E 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 150  SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFSYSILIN 208
             ++ + M      PN   +N ++ G    G V+ A +L+   M          +Y  LI+
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901

Query: 209  GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            G  K+  +  A  L+  M   G +P    YN L  G  +  + + A  LF  M + GV  
Sbjct: 902  GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961

Query: 269  DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
            D   Y   +D LC  G + E L  FR L+      D+  Y+ +I+GL K  RL+ A  LF
Sbjct: 962  DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLF 1021

Query: 329  HSL--PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            + +   RG+   D+ TYN +I  L   G +++A  ++ +++  G+ P+   FN L+ G
Sbjct: 1022 NEMKKSRGI-TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 156/326 (47%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           + K D   Y TI   L  +G + +A   L +M++     +  +YN +I     +    EA
Sbjct: 150 IIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 209

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M+  G +P++ T+S +M  L K   +E    LL+ M  +G++PN + +   +  
Sbjct: 210 MEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRV 269

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               G++N A E+   M+  GC  +V +Y++LI+  C  ++++ A  ++++M +   KP 
Sbjct: 270 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTY TL     +   ++   + + EM++ G   D   +   +D LCK G   EA     
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +R      ++ +Y+ LI GL +  RL  A E+F ++    +     TY + I      G
Sbjct: 390 VMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSG 449

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNT 380
               A + F  M+ KG+AP+ VA N 
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNA 475



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 138/276 (50%), Gaps = 41/276 (14%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   ++ ++ A  CEPN IT++ +I+GL + G+   AL+L+ ++++ + +F     P A 
Sbjct: 840  ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFS----PTAC 894

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +IDGL K G + +AK+L   M D    P+   YN +I GF  A +++ A  LF  M
Sbjct: 895  TYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 954

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL---------------------------- 153
            + +GV+P++ T+SV++D LC  G+++E                                 
Sbjct: 955  VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRL 1014

Query: 154  --------ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                    E+    G+ P+ + YN+L+    + G V  A +++  ++  G + NVF+++ 
Sbjct: 1015 EEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1074

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            LI GY  + + E A ++Y  M++ G  P   TY  L
Sbjct: 1075 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 7/208 (3%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  LF  +  +GC PN   Y+ LING  + G    A  LF+ M+      GV  +PD  
Sbjct: 911  EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE----GV--RPDLK 964

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y+ ++D LC  G VD+      ++K+  +NPDVV YN +I G    +   EA  LF EM
Sbjct: 965  TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024

Query: 122  M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               +G+ P++ T++ ++  L   G +EEA ++   + + G+ PN F +N L+ G+ L+G+
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILIN 208
               A  ++ +M + G   N  +Y  L N
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 125/251 (49%)

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T + +++ L  +GK+EE + + +LM +  ++ +   Y T+     + G + +A      M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   N +SY+ LI+   K++    A+ +Y  M+  G +P++ TY++L +GL +   +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E    L  EM+  G+  + + +   I  L + G I EA E+ + +    C  D+ +Y+ L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ID LC + +L  A E+F  +  G    D VTY  ++     +  +D  +  + +ME  G 
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 372 APDCVAFNTLM 382
            PD V F  L+
Sbjct: 362 VPDVVTFTILV 372



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 160/358 (44%), Gaps = 5/358 (1%)

Query: 52  FGVVCKPDAVIYTT-----IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
           F  V     +++TT     +++ L  +G +++   +   M+ + I  D  TY ++ +   
Sbjct: 107 FKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLS 166

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
                 +A     +M + G   N  +++ ++  L K+    EA ++   MI  G RP+  
Sbjct: 167 VKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQ 226

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            Y++LM G      +     L   ME++G K NV++++I I    +  +I  A  +   M
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G  P VVTY  L   L    +++ A ++F +M+      D   Y T +D    N  +
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
               + +  +       D+ +++ L+D LCK+G    A+     +    ++ ++ TYN +
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I  L    ++D A ++F +ME+ GV P    +   +    ++ ++   +E   +M  +
Sbjct: 407 ICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 464


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 215/423 (50%), Gaps = 41/423 (9%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P ++T++T+++  C+ G    A+ + + M      FG  C P+ V Y  +++GL  +G  
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVM----RMFG--CDPNDVSYNVLVNGLSGKGEF 258

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+AKEL+ QM    +     TYN +IRGFC      EA  L  EM+ +G  P VVT++ I
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 137 MDELCKNGKMEEASQLLELMI-------------------QIG----------------V 161
           M  LC+ G++ +A + L++M+                   ++G                +
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YNTL+DG C TG ++ AK +   M   G   +V +++IL+ G+C+   +  A  
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L+ EMLS+G+KP  + Y T  +G  ++    +AF + +EM+  G   D   Y   I+GLC
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K G   +A EL + +R+     D  +Y+ +I     SG L+ A E+F  + +  +   VV
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY ++IH+    G++D A   F +M+ KGV+P+ + +N L+ G  + N       L   M
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618

Query: 402 DER 404
           + +
Sbjct: 619 ESK 621



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 184/345 (53%), Gaps = 4/345 (1%)

Query: 53  GVVCKPDAVIYTTIIDGL----CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
           G+ C  ++ +   ++D L     K+  ++K   +  +M +  + PDV   N V++     
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           +  NE + ++  M+   ++P +VTF+ +MD  CK G++  A ++L++M   G  PN   Y
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++G    G  +RAKEL   M  +G K +  +Y+ LI G+CK +  E A  L  EML 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G  PTVVTYNT+   L  + +V  A +  D M    +  D  +Y T I G  + G   E
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           AL LF  LR       + +Y+ LIDG C++G L IA  +   + +  L  DVVT+ I++ 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             C  G +  A +LF +M ++G+ PDC+A+ T ++G ++    SK
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 190/335 (56%), Gaps = 7/335 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF++L++    P+V+TY+TLI+G CRTG+  +A  + ++MI        +C PD V
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG-----LC-PDVV 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T ++ G C+ G +  AKEL  +M  + + PD + Y + I G     + ++A  +  EM
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+++T++V+++ LCK G  ++A++L++ M   G+ P+   Y +++    ++G +
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLL 538

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+E+F  M   G   +V +Y++LI+ Y     ++ A   + EM  KG+ P V+TYN L
Sbjct: 539 RKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + + ++ A+ LF EM+  GV+ + + Y   I+      Y  +AL+L++ +   + 
Sbjct: 599 IYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREI 658

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           + D  ++S L+  L K  +L +A     +LP  ++
Sbjct: 659 KPDSCTHSALMKHLSKDYKL-LAVLRLENLPLAIV 692



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 5/339 (1%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P  V + T++D  CKEG V +A E+L  M+    +P+ V+YN ++ G     + + AK 
Sbjct: 204 RPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKE 263

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M   G++ +  T++ ++   CK    EEA+ L   M+  G  P    YNT+M   C
Sbjct: 264 LIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC 323

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GRV+ A+     M +     ++ SY+ LI GY +      AL L+SE+ SK + P+VV
Sbjct: 324 RLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVV 383

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYNTL  G      ++ A  + D+M +HG+  D   +   + G C+ G +  A ELF  +
Sbjct: 384 TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D  +Y+  I G  K G    A+ +   +       D++TYN++I+ LC  G  
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNT-----LMLGCIRNNE 390
           D A++L   M  +G+ PD V + +     L+ G +R  E
Sbjct: 504 DDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P V+TY+T++  LCR G    A    + M+N +        PD V
Sbjct: 295 EANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED------LMPDLV 348

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G  + G   +A  L  +++ KN+ P VVTYN++I G C   + + AK +  +M
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDM 408

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+VVTF++++   C+ G +  A +L + M+  G++P+   Y T + G    G  
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  +   M++ G   ++ +Y++LING CK    + A  L  +M  +GI P  VTY ++
Sbjct: 469 SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSI 528

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    + +A ++F +M + G+      Y   I      G +  A + F  ++    
Sbjct: 529 IHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LI GLCK   + +A+ LF  +    +  +  TY I+I+          A  
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALK 648

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L+ DM  + + PD    + LM
Sbjct: 649 LYKDMLDREIKPDSCTHSALM 669



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 23/301 (7%)

Query: 127 QPNV----VTFSVIMDELCKNGKMEEASQLLE-------------LMIQIGVRPNAFVYN 169
           QPN       F  I+D L KNG M+ A  ++E             +++ IG   N+ V  
Sbjct: 78  QPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSV 137

Query: 170 TLMD----GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            L+D     F     + +   +F  M + G   +V + + ++        +     +YS 
Sbjct: 138 KLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSV 197

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+   I+PT+VT+NT+     +  +V RA ++ D M+  G   +  +Y   ++GL   G 
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYN 344
              A EL   + +L  ++   +Y+ LI G CK    + A +L    L RG L   VVTYN
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGAL-PTVVTYN 316

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++++LC  G++  A      M  + + PD V++NTL+ G  R    ++ + L   +  +
Sbjct: 317 TIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSK 376

Query: 405 N 405
           N
Sbjct: 377 N 377


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 202/381 (53%), Gaps = 9/381 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ T++T+I+GLCR G    A ++ +++      +G+   P    Y ++IDG CK+G  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDI----KAWGLA--PSVATYNSLIDGYCKKGGA 242

Query: 77  DKAKE---LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
                   LL +M +  I+P  VT+  +I G+C  +++  A R+F EM  QG+  +VVT+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  GK+EE  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              + +V  Y+ILI+ Y +  ++E A+++   M  KGI P V TYN L  G         
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L DEM+  G+ AD   Y   I  LC  G + +A++L   +  +  E +  +Y+ +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A+DL  +M  K + P
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 374 DCVAFNTLMLGCIRNNETSKV 394
           + + + T+  G +    T  +
Sbjct: 543 NGITYETIKEGMMEKGYTPDI 563



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 182/362 (50%), Gaps = 14/362 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN---LFEEMINGNGEFGVVCKP 58
           +A  +   +KA+G  P+V TY++LI+G C+ G      +   L +EM+    E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            AV +  +I+G CK      A  +  +MK + I   VVTYNS+I G C      E  +L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN +TF  ++   CK G M +A+  ++ M +  V P+  +YN L+D +   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+  VVTY
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +   ++ +Y+  I   C+ G++  A +L + +    L+ + +TY  +      +G M+K
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEK 557

Query: 359 AH 360
            +
Sbjct: 558 GY 559



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 7/382 (1%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           L+  L R    + A + F       GE     +P       ++ GL     VD A++   
Sbjct: 125 LVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
               + ++PD+ T+N+VI G C      +A  +  ++   G+ P+V T++ ++D  CK G
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 145 ---KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
               M     LL+ M++ G+ P A  +  L++G+C       A  +F  M+  G   +V 
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+G C   ++E  + L  EM   G+ P  +T+  +  G  +   +  A    D M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
               V  D   Y   ID   + G + +A+ +   +       ++ +Y+CLI G  +SG  
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A  L   +    + ADVVTYN++I ALC  G++ KA  L  +M   G+ P+ + +NT+
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G           E+  RM++
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEK 502



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 9/284 (3%)

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +P+  + + ++  L    +++ A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPTVVTYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI PT VT+  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E ++L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  ++ C++ G CK G +  A +    +    +  DVV YNI+I      GKM+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  KG++P+   +N L+ G  R+ +      LL  M E+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 183 RAKELFVSMESMGCKHNVFSYSI--LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           RA + F+       +H   + S+  L+ G    K ++ A   +   L + + P + T+NT
Sbjct: 137 RAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNT 196

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL  I Q+ +A  +  +++  G+A     Y + IDG CK G    A  ++    +LK
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLK 253

Query: 301 --CELDIR----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
              E  I     ++  LI+G CK+     A  +F  + +  + A VVTYN +I  LC++G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+++   L  +ME  G++P+ + F  ++ G  +    +   + +  M ERN
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 26/131 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA- 60
           +A  L  ++   G EPN +TY+T+I G C  G+   A  +   M          C+  A 
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK--------CRKRAN 508

Query: 61  -VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y   I   C+ G +D+A +LL +M DK + P+ +TY ++  G               
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG--------------- 553

Query: 120 EMMDQGVQPNV 130
            MM++G  P++
Sbjct: 554 -MMEKGYTPDI 563


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 212/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+++K  GC P+V+T+++LI+G  + G       L EEM          CK D V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  CK G ++ A      MK + +  +VVT+++ +  FC      EA +LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  T++ ++D  CK G++++A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++  +  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +H+++ A  L  +M   G+  +   Y T +D   K+G + EA+ + + +     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y  LIDGLCK+G +  A   F+ +    L  +V  Y  ++  LC +G +++A  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  KG++ D V +  L+ G ++         L  +M
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 201/435 (46%), Gaps = 45/435 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++     PN  T + ++  L R     +   LFE++            P+  
Sbjct: 140 DAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNVF 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ L  +MK+    PDVVT+NS+I G+    + +E ++L  EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +VVT++ +++  CK G+ME A      M + GV  N   ++T +D FC  G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+   VVTY  L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V  A  +   M++ GV A+   Y T I G   N    +AL L   ++    
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 302 ELDIRSYSCLIDGLC-----------------------------------KSGRLKIAWE 326
           ELDI  Y  LI GLC                                   KSG++  A  
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +       +V+TY  +I  LC  G +D+A   F  M   G+ P+  A+  L+ G  
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 387 RNNETSKVVELLHRM 401
           +N   ++ V+L + M
Sbjct: 550 KNGCLNEAVQLFNEM 564



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A +  T++  L   G +D A   + ++++  + P+  T N ++            +RLF 
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF- 180

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +Q   PNV TF++++D LCK G++ EA  L   M ++G  P+   +N+L+DG+   G
Sbjct: 181 ---EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++  ++L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+   VVT++
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T      +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +   
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              L++ +Y+ L+DGLCK  ++  A ++   + +  + A+ + Y  +IH    +   +KA
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             L  +M+ KG+  D   +  L+ G    ++  +   LL +MDE
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 4/293 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A R    + +  V PN  T + I+  L +    + + +L+  + +    PN F +N +
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIV 194

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  G +  A+ LF  M+ MGC  +V +++ LI+GY K  E++    L  EM   G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  VVTYN L     +  ++E A+  F  M+R GV A+   + TF+D  CK G + EA++
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R+    L+  +Y+CLIDG CK+GRL  A  L   + R  +  +VVTY +++  LC
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + K+ +A D+   ME  GV  + + + TL+ G   N  + K + LL  M  +
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +++K  G E ++  Y  LI GLC       A +L  +M     E G+  +P+ +
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM----DESGL--EPNYI 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT++D   K G V +A  +L ++ D    P+V+TY ++I G C A   +EA   F +M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ PNV  ++ ++D LCKNG + EA QL   M+  G+  +  VY  L+DG+   G +
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI P    YN L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQR 263
                ++  +E A  L DEM+R
Sbjct: 650 ISKYQKLGNLEEAISLQDEMER 671



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 8/173 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F K++  G +PNV  Y+ L++GLC+ G    A+ LF EM++           D V
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL------DKV 574

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT ++DG  K+G +  A  L  +M D  +  D+  Y   I GFC  N   EA+ +F EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           +  G+ P+   ++ ++ +  K G +EEA  L + M +  V P+    +T  DG
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VLPSCTDSDTATDG 685


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 208/397 (52%), Gaps = 11/397 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL+  +K+ G EPNV TY+ L+  LC+ G    A  L  EM N        C PD V YT
Sbjct: 165 ALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG------CDPDDVSYT 218

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I  +CK G VDKA+EL ++ +     P V  YN++I G C      EA  L  EM+D+
Sbjct: 219 TVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDR 273

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV PNV+++S ++  L   G +E +  +   M   G RPN   + +L+ GF + GRV  A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L+  M   G   NV +Y+ LI+G C +  ++ A+S++++M    I+P V TY+T+  G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +   +  A + +++M   G   +   Y   +D LC+     +A +L   +    C   
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +++  I GLC++GR++ A  +   + +   + ++ TYN ++  L       +A  L  
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++E + V  DCV +NT+M G   N    +V++LL +M
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 193/378 (51%), Gaps = 11/378 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   GC+P+ ++Y+T+I+ +C+ G            ++   E  +  +P   +
Sbjct: 198 ACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD-----------VDKARELAMKFEPVVPV 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I G+CKE    +A +L+ +M D+ ++P+V++Y++VI       +   +  +F  M 
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMF 306

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +PNV TF+ ++      G++ +A  L  LMI+ GV PN   YNTL+ G C  G ++
Sbjct: 307 VRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMD 366

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  ++  ME    + NV +YS +I G+ K+ ++  A   +++M++ G +P VV Y  + 
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMV 426

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L ++   ++AF L D M   G       +  FI GLC+ G +  A+ +   +   +C 
Sbjct: 427 DVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECL 486

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +IR+Y+ L+DGL ++   + A  L   L    +  D VTYN +++    +G   +   L
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQL 546

Query: 363 FLDMEAKGVAPDCVAFNT 380
              M   G+  D +  NT
Sbjct: 547 LGKMLVNGIKLDTITVNT 564



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 192/384 (50%), Gaps = 7/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +PNVI+YST+I+ L   G+  ++L +F  M      F   C+P+  
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM------FVRGCRPNVQ 315

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T++I G    G V  A  L   M  + ++P+VV YN++I G C   + +EA  ++ +M
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++PNV T+S I+    K+G +  A +    MI  G RPN  VY  ++D  C     
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMF 435

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +L  +M S GC   V +++  I G C+   +E A+++  +M      P + TYN L
Sbjct: 436 DQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNEL 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF  +    A  L  E++   V  D   Y T + G   NG   + L+L   + +   
Sbjct: 496 LDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGI 555

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAH 360
           +LD  + +  ++  CK G++K A ++  ++       AD++T+ I++  +C     ++A 
Sbjct: 556 KLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAV 615

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
               +M  +G+ P+   +N L+ G
Sbjct: 616 VYLHEMLKRGIFPNIATWNVLVRG 639



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 187/371 (50%), Gaps = 9/371 (2%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R  H IV+   + + ++ +G F    K   + Y T+ID L +   +D    LL QMK +N
Sbjct: 49  RQEHDIVSSLEYFKSLSNSGTF----KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLEN 104

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +      +  VI+ +  +N   +  ++F  + + G +P+V  +++++D L      +  +
Sbjct: 105 VPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMIN 164

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
            L   M   G+ PN F YN L+   C  G+V+ A +L V M + GC  +  SY+ +I+  
Sbjct: 165 ALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSM 224

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A       L+   +P V  YN L  G+ +  + + AF L +EM   GV  + 
Sbjct: 225 CKLGDVDKA-----RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNV 279

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            +Y T I  L   G +  +L +F  + +  C  ++++++ LI G    GR+  A  L++ 
Sbjct: 280 ISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNL 339

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R  +  +VV YN +IH LC+DG MD+A  ++  ME   + P+   ++T++ G  ++ +
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399

Query: 391 TSKVVELLHRM 401
                E  ++M
Sbjct: 400 LVSACETWNKM 410



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 7/247 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A   + K+   GC PNV+ Y+ +++ LC+      A +L + MI+        C P  
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG------CPPTV 454

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +   I GLC+ G V+ A  +L QM+     P++ TYN ++ G   AN   EA  L  E
Sbjct: 455 ITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE 514

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + ++ V+ + VT++ IM     NG  ++  QLL  M+  G++ +    NT ++ +C  G+
Sbjct: 515 LEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGK 574

Query: 181 VNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           V  A ++  ++ +    + ++ +++I++ G C     E A+    EML +GI P + T+N
Sbjct: 575 VKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWN 634

Query: 240 TLFIGLF 246
            L  G F
Sbjct: 635 VLVRGFF 641



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 1/192 (0%)

Query: 212 KNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           +  +I  +L  +  + + G  K T +TY T+   L   ++++    L  +M+   V    
Sbjct: 50  QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQ 109

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             ++  I    ++    + L++F  +R   CE  ++ Y+ ++D L      K+   L+++
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNN 169

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L  +V TYN+++ ALC +GK+D A  L ++M  KG  PD V++ T++    +  +
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229

Query: 391 TSKVVELLHRMD 402
             K  EL  + +
Sbjct: 230 VDKARELAMKFE 241


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 214/431 (49%), Gaps = 50/431 (11%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  +K  G EPNV TY+ L+  LC+      A  L  EM N        C P+AV YTT
Sbjct: 167 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPNAVSYTT 220

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  +C+ G V + ++L      +   P V  YN++I G C   D      L  EM+++G
Sbjct: 221 VISSMCEVGMVKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKG 275

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--------------------------- 158
           + PNV+++S +++EL  +G++E A  LL  M++                           
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335

Query: 159 ---------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                     G++PN   YNTL+ GFC  G +++A  +F+ ME +GC  N+ +Y  LING
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + K   +EGA+ ++++ML+ G  P VV Y ++   L    + + A  L + M +   A  
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPS 455

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +  FI GLC  G +  A ++FR + +  +C  +I +Y+ L+DGL K+ R++ A+ L 
Sbjct: 456 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLT 515

Query: 329 HSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
             +  RGV  +   TYN ++H  C  G    A  L   M   G +PD +  N ++L   +
Sbjct: 516 REIFMRGVEWS-TSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCK 574

Query: 388 NNETSKVVELL 398
             +  + V++L
Sbjct: 575 QGKAERAVQML 585



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 183/377 (48%), Gaps = 14/377 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           KL+ F C  ++  + ++I+   + G    A+ +F  +     EFG  C P   IY  ++D
Sbjct: 102 KLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI----KEFG--CDPSVKIYNHVLD 153

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L  E  +     +   MK     P+V TYN +++  C  N  + AK+L +EM ++G  P
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N V+++ ++  +C+ G ++E  QL E        P   VYN L++G C         EL 
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGGVELM 268

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   NV SYS LIN    + +IE A SL ++ML +G  P + T ++L  G F  
Sbjct: 269 SEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVR 328

Query: 249 HQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
                A  ++++M R  G+  +  AY T + G C +G I +A+ +F  +  + C  +IR+
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRT 388

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y  LI+G  K G L+ A  +++ +       +VV Y  M+ ALC   K  +A  L   M 
Sbjct: 389 YGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMS 448

Query: 368 AKGVAPDCVAFNTLMLG 384
            +  AP    FN  + G
Sbjct: 449 KENCAPSVPTFNAFIKG 465



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 184/387 (47%), Gaps = 12/387 (3%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +T+  +I  L   G       L ++M       G  C  D  ++ ++I    + G  ++A
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQM----KLQGFHCSED--LFISVISVYRQVGLAERA 129

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            E+  ++K+   +P V  YN V+      N       ++ +M   G +PNV T++V++  
Sbjct: 130 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 189

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCKN K++ A +LL  M   G  PNA  Y T++   C  G V   ++L    E +     
Sbjct: 190 LCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPV----- 244

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V  Y+ LING CK ++ +G + L SEM+ KGI P V++Y+TL   L    Q+E AF L  
Sbjct: 245 VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKS 318
           +M + G   +     + + G    G   +AL+++ + +R    + ++ +Y+ L+ G C  
Sbjct: 305 QMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSH 364

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G +  A  +F  +       ++ TY  +I+     G ++ A  ++  M   G  P+ V +
Sbjct: 365 GNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVY 424

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
            +++    R+++  +   L+  M + N
Sbjct: 425 TSMVEALCRHSKFKEAESLIEIMSKEN 451



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 139/264 (52%), Gaps = 11/264 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++F  ++  GC PN+ TY +LING  + G    A+ ++ +M+         C P+ V
Sbjct: 369 KAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG------CCPNVV 422

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++++ LC+     +A+ L+  M  +N  P V T+N+ I+G C A   + A+++F +M
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             Q    PN+VT++ ++D L K  ++EEA  L   +   GV  +   YNTL+ G C  G 
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGL 542

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVVT 237
              A +L   M   G   +  + +++I  YCK  + E A+ +  +++S G    +P V++
Sbjct: 543 PGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML-DLVSCGRRKWRPDVIS 601

Query: 238 YNTLFIGLFEIHQVERAFKLFDEM 261
           Y  +  GL   +  E    LF+ M
Sbjct: 602 YTNVIWGLCRSNCREDGVILFERM 625



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L  ++   G E +  TY+TL++G C  G   +AL L  +M +NG         PD 
Sbjct: 510 EAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKS-------PDE 562

Query: 61  VIYTTIIDGLCKEGFVDKAKELL--LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +    II   CK+G  ++A ++L  +    +   PDV++Y +VI G C +N   +   LF
Sbjct: 563 ITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILF 622

Query: 119 IEMMDQGVQP 128
             M+ + + P
Sbjct: 623 ERMISERIIP 632


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 210/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA    K++  G EPN++TY +LING    G    A  + + M     E GV    + V
Sbjct: 210 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGV--SRNVV 263

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT +I G CK+  +D+A+++L  M+++  + PD   Y  +I G+C     ++A RL  E
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++ N+   + +++  CK G++ EA  ++  M+   ++P+++ YNTL+DG+C  G 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L   M   G +  V +Y+ L+ G C+    + AL ++  M+ +G+ P  V Y+T
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF++   E A  L+ ++   G       + T I GLCK G +VEA E+F  ++ L 
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y  LIDG CK+  +  A+++  ++ R  +   +  YN +I  L    ++ +  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DL  +M  +G+ P+ V +  L+ G  +     K       M E
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 606



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 7/383 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   G  P++ + ++L+N L + G T  A  ++++MI      G+V  PD  +
Sbjct: 141 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFM 194

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + +++  CK+G VD+A   + +M++  + P++VTY+S+I G+    D   AK +   M 
Sbjct: 195 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMS 254

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV 181
           ++GV  NVVT+++++   CK  KM+EA ++L  M  +  + P+   Y  L+DG+C TG++
Sbjct: 255 EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKI 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M  +G K N+F  + LINGYCK  EI  A  + + M+   +KP   +YNTL
Sbjct: 315 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G         AF L D+M + G+      Y T + GLC+ G   +AL+++  +     
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   YS L+DGL K    + A  L+  +         +T+N MI  LC  GKM +A +
Sbjct: 435 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F  M+  G +PD + + TL+ G
Sbjct: 495 IFDKMKDLGCSPDGITYRTLIDG 517



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 209/469 (44%), Gaps = 73/469 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + T++  +  +P+  +Y+TL++G CR GHT  A NL ++M+    E      P  +
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVL 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GLC+ G  D A ++   M  + + PD V Y++++ G     +   A  L+ ++
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + +TF+ ++  LCK GKM EA ++ + M  +G  P+   Y TL+DG+C    V
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 182 NRA-----------------------------------KELFVSMESMGCKHNVFSYSIL 206
            +A                                    +L   M   G   N+ +Y  L
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK   ++ A S Y EM   G+   ++  +T+  GL+ + +++ A  L  +M  HG 
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644

Query: 267 AAD--------------------------------TWAYRTFIDGLCKNGYIVEALELFR 294
             D                                   Y   I GLCK G + +A   F 
Sbjct: 645 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 704

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            L +     D  +Y  LI G   +G +  A+ L   + R  L+ ++VTYN +I+ LC   
Sbjct: 705 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 764

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +D+A  LF  +  KG+ P+ V +NTL+ G  +        +L  +M E
Sbjct: 765 NVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 187/390 (47%), Gaps = 22/390 (5%)

Query: 16  EPNVITYSTLINGLCRT---GHTIVALN--------------LFEEMINGNGEFGVVCKP 58
            PNV +Y  L++ L R      T   LN              +++E++    EF      
Sbjct: 65  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF---- 120

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              ++  I+    ++G    A  +   M      P + + NS++       +++ A  ++
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G+ P+V   S++++  CK+GK++EA+  ++ M  +GV PN   Y++L++G+   
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVT 237
           G V  AK +   M   G   NV +Y++LI GYCK  +++ A  +   M  +  + P    
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G     +++ A +L DEM R G+  + +   + I+G CK G I EA  +   + 
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  SY+ L+DG C+ G    A+ L   + +  +   V+TYN ++  LC  G  D
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            A  ++  M  +GVAPD V ++TL+ G  +
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFK 450



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 61/329 (18%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA---------------LNLFEEM 45
           +EA  +F K+K  GC P+ ITY TLI+G C+  +   A               + ++  +
Sbjct: 490 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 549

Query: 46  INGN-------------GEFGVV-CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           I+G               E G+    P+ V Y  +IDG CKEG +DKA     +M +  +
Sbjct: 550 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-------------------------- 125
           + +++  ++++ G       +EA  L  +M+D G                          
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 126 ------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +++ +  LCK GK+++A +   ++   G  P+ F Y TL+ G+   G
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P VVTYN
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 789

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           TL  G  +I  ++ AFKL D+M   G++ 
Sbjct: 790 TLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 168/340 (49%), Gaps = 9/340 (2%)

Query: 70  LCKEGFVDKAK----ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           LCK  F D+      EL+   ++   +P V  ++ +++ +     +  A  +F  M   G
Sbjct: 97  LCK--FKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCG 152

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P++ + + +++ L KNG+   A  + + MI++G+ P+ F+ + +++ FC  G+V+ A 
Sbjct: 153 RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAA 212

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
                ME++G + N+ +Y  LINGY    ++E A  +   M  KG+   VVTY  L  G 
Sbjct: 213 GFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 272

Query: 246 FEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            +  +++ A K+   MQ    +  D  AY   IDG C+ G I +A+ L   +  L  + +
Sbjct: 273 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 332

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LI+G CK G +  A  +   +    L  D  +YN ++   C +G   +A +L  
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 392

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M  +G+ P  + +NTL+ G  R       +++ H M +R
Sbjct: 393 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F +I+    + G  + A  + + M + G  P+    N+L++     G  + A  ++  M 
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G   +VF  SI++N +CK+ +++ A     +M + G++P +VTY++L  G   +  VE
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  +   M   GV+ +                                   + +Y+ LI
Sbjct: 245 AAKGVLKFMSEKGVSRN-----------------------------------VVTYTLLI 269

Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G CK  ++  A ++   +     L+ D   Y ++I   C  GK+D A  L  +M   G+
Sbjct: 270 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 329

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +    N+L+ G  +  E  +   ++ RM + N
Sbjct: 330 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 205/376 (54%), Gaps = 13/376 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+F   +   C P+VIT + LING C       AL LF EM      F +V  P+A 
Sbjct: 56  QAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM---EKNFALV--PEAT 107

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II   CK   +D+A++LL +      + DV+   SV RGFC A   +EA +L ++M
Sbjct: 108 TYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM 165

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++   +P++V ++VI+   CK G++ EA ++LE ++ +G  PNA  Y TL+DGFC +G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 181 VNRAKELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           ++ A +LF  +S      + NV +++ LI+G CK   +E A  L  +M ++ ++    TY
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  GL +  +     ++F+EM R G       Y T +   CK G + +A ++ R++  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+ +Y+ L++GL ++G+++ A E F  + R       V Y+ ++   C    +D+
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 359 AHDLFLDMEAKGVAPD 374
           A   +++M  + +APD
Sbjct: 406 AVKYYVEMLDRRLAPD 421



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 210/408 (51%), Gaps = 15/408 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + ++    C PN+   + L+  LC+ G    A+ +F          G+ C P  +
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFR---------GIQCSPSVI 71

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
               +I+G C+   +DKA EL  +M K+  + P+  TY ++I+ +C  +  ++A++L  E
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTG 179
                   +V+  + +    CK  +++EA QLL  M++    +P+   +N ++ GFC  G
Sbjct: 132 --SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG 189

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPTVVT 237
           RV  A E+  ++ SMGC  N  +Y+ LI+G+CK+  +  AL L+  + S+    +P VVT
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L  GL +  ++E AF+L  +M+   + ADT+ Y T +DGLCK G   E   +F  + 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C   + +Y+ L+   CK+G L+ A ++  S+    +  DV TY +++  L  +GK+ 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A + F  +  +   P  V ++ L+ GC +     + V+    M +R 
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 7/308 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C  +VI  +++  G C+      A  L  +M+          KPD V +  II G CK G
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAG 189

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--IEMMDQGVQPNVVT 132
            V +A E+L  +      P+ VTY ++I GFC + + +EA +LF  +   D   +PNVVT
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+ ++  LCK  ++E A +L++ M    +R + F Y TLMDG C  GR +    +F  M 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC  +V +Y+ L++ +CK   ++ A  +   M++KGI P V TY  L  GLFE  +V 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A + F+++ R         Y   + G CK   + EA++ +  +   +   D  +   L+
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429

Query: 313 DGLCKSGR 320
           + LCK GR
Sbjct: 430 EMLCKRGR 437



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 40/327 (12%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  T++ +I G C A    EA   + +M+++   PN+   ++++  LC+ GKM++A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQA--- 57

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--------------------- 191
           + +   I   P+    N L++GFC    +++A ELF  M                     
Sbjct: 58  MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 192 -------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVVT 237
                        ES  C  +V + + +  G+CK + ++ A  L  +M+  K  KP +V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL- 296
           +N +  G  +  +V  A+++ + +   G   +   Y T IDG CK+G + EAL+LF+ L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 297 -RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
            R    E ++ +++ LI GLCK+ RL+ A+EL   +    L AD  TY  ++  LC  G+
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             +   +F +M  +G  P  V + TL+
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLV 324



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 146/311 (46%), Gaps = 40/311 (12%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PN  TFSV++  LCK G++ EA +    M++    PN    N L+   C  G++++A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFI--- 243
           F  ++   C  +V + +ILING+C+ + ++ AL L+ EM     + P   TY  +     
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 244 ------------------------------GLFEIHQVERAFK-LFDEMQRHGVAADTWA 272
                                         G  +  +V+ A++ L D +++     D  A
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I G CK G + EA E+  TL  + C  +  +Y+ LIDG CKSG L  A +LF  L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 333 RGVLIAD--VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                A+  VVT+N +I  LC   +++ A +L   M+A+ +  D   + TLM G  +   
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 391 TSKVVELLHRM 401
           TS+V  +   M
Sbjct: 298 TSEVSRVFEEM 308



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 127/247 (51%), Gaps = 11/247 (4%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN F ++ L+ G C  GR+  A E +  M    C  N+   ++L+   C+  +++ A+++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 223 YSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDG 279
           +     +GI+  P+V+T N L  G  E+  +++A +LF EM+++  +  +   Y   I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIA 338
            CK   + +A +L        C  D+ + + +  G CK+ R+  A++L   +  +     
Sbjct: 116 YCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+V +N++IH  C  G++ +A+++   + + G  P+ V + TL+ G  ++   S+ ++L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 399 HRMDERN 405
             +  R+
Sbjct: 234 KVLSSRD 240


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 202/381 (53%), Gaps = 9/381 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ T++T+I+GLCR G    A ++ +++      +G+   P    Y ++IDG CK+G  
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDI----KAWGLA--PSVATYNSLIDGYCKKGGA 242

Query: 77  DKAKE---LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
                   LL +M +  I+P  VT+  +I G+C  +++  A R+F EM  QG+  +VVT+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  GK+EE  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              + +V  Y+ILI+ Y +  ++E A+++   M  KGI P V TYN L  G         
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 422

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L DEM+  G+ AD   Y   I  LC  G + +A++L   +  +  E +  +Y+ +I 
Sbjct: 423 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A+DL  +M  K + P
Sbjct: 483 GFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 374 DCVAFNTLMLGCIRNNETSKV 394
           + + + T+  G +    T  +
Sbjct: 543 NGITYETIKEGMMEKGYTPDI 563



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 182/362 (50%), Gaps = 14/362 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN---LFEEMINGNGEFGVVCKP 58
           +A  +   +KA+G  P+V TY++LI+G C+ G      +   L +EM+    E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            AV +  +I+G CK      A  +  +MK + I   VVTYNS+I G C      E  +L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN +TF  ++   CK G M +A+  ++ M +  V P+  +YN L+D +   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+  VVTY
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +   ++ +Y+  I   C+ G++  A +L + +    L+ + +TY  +      +G M+K
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEK 557

Query: 359 AH 360
            +
Sbjct: 558 GY 559



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 7/382 (1%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           L+  L R    + A + F       GE     +P       ++ GL     VD A++   
Sbjct: 125 LVLALARASQPLRAYDAFLLA----GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFR 180

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
               + ++PD+ T+N+VI G C      +A  +  ++   G+ P+V T++ ++D  CK G
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 145 ---KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
               M     LL+ M++ G+ P A  +  L++G+C       A  +F  M+  G   +V 
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+G C   ++E  + L  EM   G+ P  +T+  +  G  +   +  A    D M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
               V  D   Y   ID   + G + +A+ +   +       ++ +Y+CLI G  +SG  
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A  L   +    + ADVVTYN++I ALC  G++ KA  L  +M   G+ P+ + +NT+
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G           E+  RM++
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEK 502



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 9/284 (3%)

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +P+  + + ++  L    +++ A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPTVVTYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI PT VT+  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E ++L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  ++ C++ G CK G +  A +    +    +  DVV YNI+I      GKM+ A 
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M  KG++P+   +N L+ G  R+ +      LL  M E+
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 6/192 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+   +   G  PNV TY+ LI G  R+G    A  L +EM     E G+  + D V
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM----KEKGI--EADVV 440

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC +G V KA +LL +M +  + P+ +TYN++I+GFC   +   A  +   M
Sbjct: 441 TYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                + NVVT++V +   C+ GKM+EA+ LL  M+   + PN   Y T+ +G    G  
Sbjct: 501 EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560

Query: 182 NRAKELFVSMES 193
              +   VS  S
Sbjct: 561 PDIRGCTVSQAS 572



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 183 RAKELFVSMESMGCKHNVFSYSI--LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           RA + F+       +H   + S+  L+ G    K ++ A   +   L + + P + T+NT
Sbjct: 137 RAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNT 196

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL  I Q+ +A  +  +++  G+A     Y + IDG CK G    A  ++    +LK
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLK 253

Query: 301 --CELDIR----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
              E  I     ++  LI+G CK+     A  +F  + +  + A VVTYN +I  LC++G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K+++   L  +ME  G++P+ + F  ++ G  +    +   + +  M ERN
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 197/386 (51%), Gaps = 13/386 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F  +    C P+  TY TL++GLC+      A+ L +EM +        C P  V
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPV 258

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +IDGLCK+G + +  +L+  M  K   P+ VTYN++I G C     ++A  L   M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VT+  +++ L K  +  +A +LL  M + G   N  +Y+ L+ G    G+ 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   GCK N+  YS+L++G C+  +   A  + + M++ G  P   TY++L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    E A +++ EM + G + + + Y   IDGLC  G + EA+ ++  +  +  
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-----PRGVLIADVVTYNIMIHALCADGKM 356
           + D  +YS +I GLC  G +  A +L+H +     P+     DVVTYNI++  LC    +
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDI 556

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
            +A DL   M  +G  PD +  NT +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFL 582



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 197/391 (50%), Gaps = 9/391 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN ++++ +I  LC+      A+ +F  M          C PD   Y T++DGLCKE  +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK------CLPDGYTYCTLMDGLCKEERI 238

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  LL +M+ +  +P  V YN +I G C   D     +L   M  +G  PN VT++ +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC  GK+++A  LLE M+     PN   Y TL++G     R   A  L  SME  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N   YS+LI+G  K  + E A+SL+ +M  KG KP +V Y+ L  GL    +   A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + + M   G   + + Y + + G  K G   EA+++++ +    C  +   YS LIDGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM---EAKGVAP 373
             GR+K A  ++  +    +  D V Y+ +I  LC  G MD A  L+ +M   E     P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V +N L+ G     + S+ V+LL+ M +R
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 179/386 (46%), Gaps = 58/386 (15%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN +TY+TLI+GLC  G    A++L E M++        C P+ V Y T+I+GL K+
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQ 340

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
                A  LL  M+++  + +   Y+ +I G      + EA  L+ +M ++G +PN+V +
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           SV++D LC+ GK  EA ++L  MI  G  PNA+ Y++LM GF  TG    A +++  M+ 
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT------------------- 234
            GC  N F YS+LI+G C    ++ A+ ++S+ML+ GIKP                    
Sbjct: 461 TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDA 520

Query: 235 -------------------VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                              VVTYN L  GL     + RA  L + M   G   D     T
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           F++ L +     +    F        EL +R        L K  R+  A  +   +    
Sbjct: 581 FLNTLSEKSNSCDKGRSFLE------ELVVR--------LLKRQRVSGACTIVEVMLGKY 626

Query: 336 LIADVVTYNIMIHALCADGKMDKAHD 361
           L     T+ +++  +C   K++ A D
Sbjct: 627 LAPKTSTWAMIVREICKPKKINAAID 652



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 142/249 (57%), Gaps = 9/249 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L + ++  G   N   YS LI+GL + G    A++L+ +M     E G  CKP+ V
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM----AEKG--CKPNIV 398

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ ++DGLC+EG  ++AKE+L +M      P+  TY+S+++GF       EA +++ EM
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   N   +SV++D LC  G+++EA  +   M+ IG++P+   Y++++ G C  G +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518

Query: 182 NRAKELFVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           + A +L+  M   E    + +V +Y+IL++G C  K+I  A+ L + ML +G  P V+T 
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578

Query: 239 NTLFIGLFE 247
           NT    L E
Sbjct: 579 NTFLNTLSE 587



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 23/346 (6%)

Query: 72  KEGFVDKAKELLLQMKDK-NINPDVVTYNSVI----------RG---FCYANDSNEAKRL 117
           K    DKA +L  +M D+      V ++NSV+          RG   + Y  +SN     
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN----- 178

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
               M+  + PN ++F++++  LCK   ++ A ++   M +    P+ + Y TLMDG C 
Sbjct: 179 ----MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             R++ A  L   M+S GC  +   Y++LI+G CK  ++     L   M  KG  P  VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  GL    ++++A  L + M       +   Y T I+GL K     +A+ L  ++ 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                L+   YS LI GL K G+ + A  L+  +       ++V Y++++  LC +GK +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +A ++   M A G  P+   +++LM G  +     + V++   MD+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 11/281 (3%)

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV---NRAKELF 188
           T S +++    +G  +   +LL    +I +     +  + +  F   G+    ++A +LF
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLS---RIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLF 135

Query: 189 VSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----IKPTVVTYNTLFI 243
             M +   CK +V S++ ++N           L  Y  +++      I P  +++N +  
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            L ++  V+RA ++F  M       D + Y T +DGLCK   I EA+ L   ++   C  
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
               Y+ LIDGLCK G L    +L  ++     + + VTYN +IH LC  GK+DKA  L 
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M +    P+ V + TL+ G ++    +  V LL  M+ER
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 33/363 (9%)

Query: 43  EEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
           E+M     + G     D+ + +++I+     G  D  ++LL +++ +N      ++  V 
Sbjct: 61  EKMFKSAPKMGSFKLGDSTL-SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVF 119

Query: 103 RGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV 161
           R +  A+  ++A  LF  M+D+   + +V +F+ +++ +   G           +   G+
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEG-----------LYHRGL 168

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
               +V N+ M+                    M    N  S++++I   CK + ++ A+ 
Sbjct: 169 EFYDYVVNSNMN--------------------MNISPNGLSFNLVIKALCKLRFVDRAIE 208

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           ++  M  +   P   TY TL  GL +  +++ A  L DEMQ  G +     Y   IDGLC
Sbjct: 209 VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K G +    +L   + +  C  +  +Y+ LI GLC  G+L  A  L   +     I + V
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY  +I+ L    +   A  L   ME +G   +   ++ L+ G  +  +  + + L  +M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388

Query: 402 DER 404
            E+
Sbjct: 389 AEK 391



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 24/169 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +++K+   G +P+ + YS++I GLC  G    AL L+ EM+          +PD V
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS---QPDVV 541

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE- 120
            Y  ++DGLC +  + +A +LL  M D+  +PDV+T N+ +      ++S +  R F+E 
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601

Query: 121 --------------------MMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
                               M+ + + P   T+++I+ E+CK  K+  A
Sbjct: 602 LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 205/368 (55%), Gaps = 6/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ T+S LIN LC+      A    +E + G              Y ++++ LCK   V
Sbjct: 407 PDMATHSMLINELCKADKIQEA----QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKV 462

Query: 77  DKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            +A  +   M  +++  PDVV+Y+ +I GFC  ++   A++L+ +M+D    PNV T++ 
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            ++ L + G++ +A  + E M+  G  P+   Y+TL+ GF L  + ++A ELF +M S G
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ N  +Y+ L++G CK  + + A  L+ +M+ +G  P  VTY TL  G   + ++E+A 
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++FDEM   G   D  AY   + G  + G   EA +LF+ +   +C+ D  S++ +IDGL
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702

Query: 316 CKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            K+ RL  A E+F  + +    + D+VTYN +I  LC + ++ +A  +F +++   ++PD
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762

Query: 375 CVAFNTLM 382
             AFN L+
Sbjct: 763 PHAFNVLL 770



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 206/391 (52%), Gaps = 10/391 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+  T  ++I  LC+ G    AL+L E MI         C PD   ++ +I+ LCK   
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG-----YC-PDMATHSMLINELCKADK 424

Query: 76  VDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVT 132
           + +A+E L  M  K  + +    +YNS++   C A   ++A  +F  M+ ++   P+VV+
Sbjct: 425 IQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVS 484

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +S+++D  CK  ++  A +L + MI +   PN   YN  ++G    GR+  A+ ++  M 
Sbjct: 485 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV 544

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           + GC  +V +YS LI+G+   ++ + A  L+  M+S+G +P  VTYN L  GL +  + +
Sbjct: 545 AAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPD 604

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A +LF +M   G   D   Y T + G C  G I +A+E+F  +     + D+ +Y+CL+
Sbjct: 605 EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA-KGV 371
            G  ++G+   A +LF  +       D V++NIMI  L    ++D A ++F  ME   G 
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +PD V +N+L+ G       S+ +++   +D
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEID 755



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 212/437 (48%), Gaps = 32/437 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM----------INGNG 50
           +EA+ LF  +   GC+P+   YS ++   C+  +   A  LF EM          +    
Sbjct: 251 IEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTA 310

Query: 51  EFGVVCKPDAV-------------------IYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
               +CK   +                   +Y  +I  L + G +DKA+E  L++  +NI
Sbjct: 311 FLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P   T +SVI+  C A   + A  L   M+ +G  P++ T S++++ELCK  K++EA +
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 152 LLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCKHNVFSYSILIN 208
            L+ M +       + F YN+L++  C   +V++A  +F +M S      +V SYSILI+
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+CK  E+  A  LY +M+     P V TYN    GL    ++  A  +++EM   G + 
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D   Y T I G        +A ELF T+    C  +  +Y+CL+ GLCK  +   A ELF
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +       D VTY  +++  C  GK+++A ++F +M +KG  PD VA+N L+ G  R 
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670

Query: 389 NETSKVVELLHRMDERN 405
            +  +  +L   M  R 
Sbjct: 671 GKPGEAKQLFQVMVSRQ 687



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 186/339 (54%), Gaps = 17/339 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V++YS LI+G C+      A  L+++MI+ N      C P+   Y   ++GL ++G +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN------CVPNVTTYNAFLNGLMRKGRI 533

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A+ +  +M     +PDV+TY+++I GF  A   ++A  LF  M+ +G +PN VT++ +
Sbjct: 534 ADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCL 593

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LCK  K +EA +L   M++ G  P+   Y TL+ GFC  G++ +A E+F  M S G 
Sbjct: 594 LHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 653

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+ G+ +  +   A  L+  M+S+  KP  V++N +  GL +  +++ A +
Sbjct: 654 DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVE 713

Query: 257 LFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +F+ M Q HG + D   Y + I GLC    + EA+++F+ +  LK   D  +++ L++ +
Sbjct: 714 VFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
               +  I ++        +   D   +N+++ A+ A G
Sbjct: 774 ----KCGIVYQF------EIRFKDPPAFNVLMEAMHAAG 802



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 150/279 (53%), Gaps = 7/279 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++    C PNV TY+  +NGL R G    A  ++EEM+         C PD + 
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG------CSPDVIT 554

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+I G       D+A EL   M  +   P+ VTYN ++ G C  +  +EA  LF +M+
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  P+ VT++ ++   C  GK+E+A ++ + M+  G  P+   YN L+ GF   G+  
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 674

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTL 241
            AK+LF  M S  CK +  S++I+I+G  K K ++ A+ ++  M    G  P +VTYN+L
Sbjct: 675 EAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 734

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             GL    ++  A K+F E+ R  ++ D  A+   ++ +
Sbjct: 735 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 216/476 (45%), Gaps = 79/476 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+ A G  PN  TY+ L+   C   ++  A+  F EM++         KP + 
Sbjct: 147 QAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG------FKPSST 200

Query: 62  IYTTIIDGL---CKEGFVDK----------AKELLLQ--------MKDKNI--------- 91
           +Y  + + L    KEG   +          A E++L+        ++DK I         
Sbjct: 201 LYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAM 260

Query: 92  -----NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP-NVVTFSVIMDELCKNGK 145
                 PD   Y+ ++   C   + +EA +LF+EM  +   P N V ++  +  LCK+GK
Sbjct: 261 VKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGK 320

Query: 146 MEEA-------------SQ-----LLELMIQIG----------------VRPNAFVYNTL 171
           +E+A             SQ     L+ L+I+ G                ++P++   +++
Sbjct: 321 IEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV 380

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-- 229
           +   C  GRV+ A  L  +M   G   ++ ++S+LIN  CK  +I+ A      M  K  
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVE 288
               +  +YN+L   L +  +V +AF +F  M        D  +Y   IDG CK   +  
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L++ +  L C  ++ +Y+  ++GL + GR+  A  ++  +       DV+TY+ +IH
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                 K D+AH+LF  M ++G  P+ V +N L+ G  + ++  +  EL  +M ER
Sbjct: 561 GFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 196/476 (41%), Gaps = 79/476 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  L+A   + +V TY+ L++ L R      A  +FE+M+      GVV  P+  
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ----GVV--PNGF 165

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR------------------ 103
            Y  ++   C E   D+A     +M DK   P    Y  V                    
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225

Query: 104 -----------------GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             F   + + EA +LF  M+  G +P+   +S ++   CK   +
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 147 EEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYS 204
           +EA +L LE+ ++     N   +   + G C +G++ +A E   +M ES+     V+   
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDML 345

Query: 205 I---------------------------------LINGYCKNKEIEGALSLYSEMLSKGI 231
           I                                 +I   CK   ++ ALSL   M+ +G 
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH--GVAADTWAYRTFIDGLCKNGYIVEA 289
            P + T++ L   L +  +++ A +    M R     ++  ++Y + ++ LCK   + +A
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQA 465

Query: 290 LELFRTLRILKCEL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             +F T+   +  + D+ SYS LIDG CK   L  A +L+  +     + +V TYN  ++
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLN 525

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L   G++  A  ++ +M A G +PD + ++TL+ G     +  +  EL   M  R
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 148/346 (42%), Gaps = 44/346 (12%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           T  +VI+   +  D  EA   F  +  +  + +V T++ ++D+L ++  +++A Q+ E M
Sbjct: 99  TVGAVIK---HLRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY------------- 203
           +  GV PN F Y  L+   C     + A   F  M   G K +   Y             
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 204 -----------------------SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
                                  ++L+N   ++K IE A  L+  M+  G KP    Y+ 
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSY 274

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNGYIVEALELFRTLR-I 298
           + +   ++  ++ AFKLF EM     A  +  A+  F+ GLCK+G I +A E  RT++  
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES 334

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L     +  Y  LI  L +SGR+  A E    +    +     T + +I  LC  G++D 
Sbjct: 335 LSSSQPV--YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDS 392

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  L   M  +G  PD    + L+    + ++  +  E L  MD +
Sbjct: 393 ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 30/169 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  LF K+   GC+P+ +TY+TL+ G C  G    A+ +F+EM++   +  VV      
Sbjct: 605 EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNI 91
                                  CKPD V +  +IDGL K   +D A E+  +M +D   
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +PD+VTYNS+I G C     +EA ++F E+    + P+   F+V+++ +
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 205/376 (54%), Gaps = 13/376 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+F   +   C P+VIT + LING C       AL LF EM      F +V  P+A 
Sbjct: 56  QAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEM---EKNFALV--PEAT 107

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT II   CK   +D+A++LL +      + DV+   SV RGFC A   +EA +L ++M
Sbjct: 108 TYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM 165

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++   +P++V ++VI+   CK G++ EA ++LE ++ +G  PNA  Y TL+DGFC +G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 181 VNRAKELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           ++ A +LF  +S      + NV +++ LI+G CK   +E A  L  +M ++ ++    TY
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            TL  GL +  +     ++F+EM R G       Y T +   CK G + +A ++ R++  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+ +Y+ L++GL ++G+++ A E F  + R       V Y+ ++   C    +D+
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 359 AHDLFLDMEAKGVAPD 374
           A   +++M  + +APD
Sbjct: 406 AVKYYVEMLDRRLAPD 421



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 210/408 (51%), Gaps = 15/408 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + ++    C PN+   + L+  LC+ G    A+ +F          G+ C P  +
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFR---------GIQCSPSVI 71

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
               +I+G C+   +DKA EL  +M K+  + P+  TY ++I+ +C  +  ++A++L  E
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTG 179
                   +V+  + +    CK  +++EA QLL  M++    +P+   +N ++ GFC  G
Sbjct: 132 --SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG 189

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPTVVT 237
           RV  A E+  ++ SMGC  N  +Y+ LI+G+CK+  +  AL L+  + S+    +P VVT
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L  GL +  ++E AF+L  +M+   + ADT+ Y T +DGLCK G   E   +F  + 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C   + +Y+ L+   CK+G L+ A ++  S+    +  DV TY +++  L  +GK+ 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A + F  +  +   P  V ++ L+ GC +     + V+    M +R 
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 7/308 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C  +VI  +++  G C+      A  L  +M+          KPD V +  II G CK G
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAG 189

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--IEMMDQGVQPNVVT 132
            V +A E+L  +      P+ VTY ++I GFC + + +EA +LF  +   D   +PNVVT
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+ ++  LCK  ++E A +L++ M    +R + F Y TLMDG C  GR +    +F  M 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC  +V +Y+ L++ +CK   ++ A  +   M++KGI P V TY  L  GLFE  +V 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A + F+++ R         Y   + G CK   + EA++ +  +   +   D  +   L+
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429

Query: 313 DGLCKSGR 320
           + LCK GR
Sbjct: 430 EMLCKRGR 437



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 157/327 (48%), Gaps = 40/327 (12%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  T++ +I G C A    EA   + +M+++   PN+   ++++  LC+ G M++A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQA--- 57

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--------------------- 191
           + +   I   P+    N L++GFC    +++A ELF  M                     
Sbjct: 58  MAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 192 -------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVVT 237
                        ES  C  +V + + +  G+CK + ++ A  L  +M+  K  KP +V 
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL- 296
           +N +  G  +  +V  A+++ + +   G   +   Y T IDG CK+G + EAL+LF+ L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 297 -RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
            R    E ++ +++ LI GLCK+ RL+ A+EL   +    L AD  TY  ++  LC  G+
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             +   +F +M  +G  P  V + TL+
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLV 324



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 40/311 (12%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           PN  TFSV++  LCK G++ EA +    M++    PN    N L+   C  G +++A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFI--- 243
           F  ++   C  +V + +ILING+C+ + ++ AL L+ EM     + P   TY  +     
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 244 ------------------------------GLFEIHQVERAFK-LFDEMQRHGVAADTWA 272
                                         G  +  +V+ A++ L D +++     D  A
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I G CK G + EA E+  TL  + C  +  +Y+ LIDG CKSG L  A +LF  L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 333 RGVLIAD--VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                A+  VVT+N +I  LC   +++ A +L   M+A+ +  D   + TLM G  +   
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 391 TSKVVELLHRM 401
           TS+V  +   M
Sbjct: 298 TSEVSRVFEEM 308



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 126/247 (51%), Gaps = 11/247 (4%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN F ++ L+ G C  GR+  A E +  M    C  N+   ++L+   C+   ++ A+++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 223 YSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDG 279
           +     +GI+  P+V+T N L  G  E+  +++A +LF EM+++  +  +   Y   I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIA 338
            CK   + +A +L        C  D+ + + +  G CK+ R+  A++L   +  +     
Sbjct: 116 YCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+V +N++IH  C  G++ +A+++   + + G  P+ V + TL+ G  ++   S+ ++L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 399 HRMDERN 405
             +  R+
Sbjct: 234 KVLSSRD 240


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 228/467 (48%), Gaps = 64/467 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEFGVV- 55
           EA  +  K++ +GC P+ ITY+T+++GLC+ G    A +L  +M N         F ++ 
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274

Query: 56  ---CK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              C+                    PDA  Y  +I G CK+G + +A  L  +M++  ++
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI---------MDEL--- 140
           PDVVTYN++I G      S E  +L  EM  +G++PN VT++V+         MDE+   
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT 394

Query: 141 -----------------------CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
                                  CK GKM+EA +L++ M + G++ +    NT++   C 
Sbjct: 395 VRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCR 454

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +++ A +L  S    G   +  SY  LI GY K+++   AL L+ EM  K I P+++T
Sbjct: 455 ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN++  GL ++ +  +A    DE+   G+  D   Y T I G C+ G + +A +    + 
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+ + + L+ GLCK G L+ A +LF++        D V+YN +I +LC + +  
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A DL  +ME K + PDC  +N ++ G           E + ++ E+
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 223/437 (51%), Gaps = 34/437 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCR--TGHTI----------------VALNLFE 43
           +AA +F ++K  G +P ++T +TL+N L R  + H+I                +  N F 
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201

Query: 44  EMINGN---GEFGVV-----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
            +I+G+     FG             C PD + Y TI+DGLCK+G +++A++LLL MK+K
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNK 261

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEE 148
            + P+  T+N ++ G C      EA  + IE+M Q  V P+  T++V++   CK G++ E
Sbjct: 262 GLFPNRTTFNILVVGCCRLGWLKEAANV-IELMSQNSVVPDAWTYNVMISGFCKQGRIAE 320

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A +L E M  + + P+   YNTL++G    G      +L   ME  G K N  +Y++++ 
Sbjct: 321 AMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVK 380

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            + K  +++       +M   G  P +VTYNTL     ++ +++ AF+L DEM R G+  
Sbjct: 381 WFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKM 440

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D     T +  LC+   + EA +L  + R     +D  SY  LI G  K  +   A  L+
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +    +I  ++TYN MI  LC  GK ++A D   ++   G+ PD + +NT++ G  + 
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQE 560

Query: 389 NETSKVVELLHRMDERN 405
            +  K  +  ++M E+N
Sbjct: 561 GQVEKAFQFHNKMVEKN 577



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 41/298 (13%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           K++  GC P+++TY+TLI+  C+ G    A  L +EM    G  G+  K D V   T++ 
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM----GRKGL--KMDDVTLNTMLR 450

Query: 69  GLCKEGFVDKAKELLL-----------------------------------QMKDKNINP 93
            LC+E  +D+A +LL                                    +MK+K I P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++TYNS+I G C    +N+A     E+++ G+ P+ +T++ I+   C+ G++E+A Q  
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M++   +P+    NTL+ G C  G + +A +LF +  S G   +  SY+ +I   CK 
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K    A  L  EM  K + P   TYN +  GL +  +++ A +   ++   G + + +
Sbjct: 631 KRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 38/238 (15%)

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI---HQVERAFKLFDEM 261
           I I  Y        A  +++ M   G++PT++T NTL   L      H +  +  +F + 
Sbjct: 129 ISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF 188

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + GV  +T ++   I G C      EA+ +   +R   C  D  +Y+ ++DGLCK GRL
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRL 248

Query: 322 ------------------------------KIAW-----ELFHSLPRGVLIADVVTYNIM 346
                                         ++ W      +   + +  ++ D  TYN+M
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM 308

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I   C  G++ +A  L  +ME   ++PD V +NTL+ GC  +  + +  +L+  M+ R
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 29/156 (18%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+V+T +TL+ GLC+ G    AL LF   I+   +       DAV Y TII  LCKE  
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDV------DAVSYNTIILSLCKEKR 632

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL-------------FIEM- 121
             +A +LL +M++K + PD  TYN+++ G   A    +A+               F+E+ 
Sbjct: 633 FGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELG 692

Query: 122 ---------MDQGVQPNVVTFSVIMDELCKNGKMEE 148
                    + Q   PN + +S  ++ELC  G+ ++
Sbjct: 693 KRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+P+  TY+ LI  LC  G    A NLF+EMI         CKP+  
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG------CKPNVH 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLC++G +++A  +  +M    I P V+TYN++I G+C       A  L   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +PNV TF+ +M+ LC+ GK  +A  LL+ M+  G+ P+   YN L+DG C  G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +L  SM S   + +  +++ +IN +CK  + + A +    ML KGI    VT  TL
Sbjct: 458 NVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+  + +   A  + + + +  +     +    +D L K   + E L +   +  L  
Sbjct: 518 IDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGL 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+DGL +SG +  ++ +   +     + +V  Y I+I+ LC  G++++A  
Sbjct: 578 VPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M+  GV+P+ V +  ++ G + N +  + +E +  M ER
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 177/323 (54%), Gaps = 1/323 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TI++ LCK G+ + A+  + ++       D     S++ GFC   +  +A ++F  M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 123 DQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G   PN V++S+++  LC+ G++EEA  L + M + G +P+   Y  L+   C  G +
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF  M + GCK NV +Y++LI+G C++ +IE A  +  +M+  GI P+V+TYN L
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +V  AF+L   M++     +   +   ++GLC+ G   +A+ L + +     
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+ LIDGLC+ G + +A++L  S+    L  D +T+  +I+A C  GK D A  
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA 497

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
               M  KG++ D V   TL+ G
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDG 520



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 200/446 (44%), Gaps = 49/446 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L T ++   C+PNV T++ L+ GLCR G    A++L + M++ NG       PD 
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDI 441

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDGLC+EG ++ A +LL  M   ++ PD +T+ ++I  FC    ++ A      
Sbjct: 442 VSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGL 501

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+  + VT + ++D +C  GK  +A  +LE ++++ +       N ++D      +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCK 561

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +     +   +  +G   +V +Y+ L++G  ++ +I G+  +   M   G  P V  Y  
Sbjct: 562 LKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTI 621

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A KL   MQ  GV+ +   Y   + G   NG +  ALE  R +    
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681

Query: 301 CELDIRSYSCLIDG----------------------------------------LCKSGR 320
            EL+ R YS L+ G                                        LCK GR
Sbjct: 682 YELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGR 741

Query: 321 LKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
              +  L  + L  GV +   +  +I++ + C+  K  K  +L   +   G  P   +F 
Sbjct: 742 TDESNGLVQTILKSGVFLEKAI--DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFC 799

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
            ++ G  +  +T +  EL+  +   N
Sbjct: 800 LVIQGLKKEGDTERARELVMELLTSN 825



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G R N   Y++L+           A   +  ME+ G    +  Y  ++N  CKN   E A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFID 278
                ++L  G         +L +G      +  A K+FD M R G  A ++ +Y   I 
Sbjct: 215 EMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIH 274

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC+ G + EA  L   +    C+   R+Y+ LI  LC  G +  A+ LF  +       
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKP 334

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +V TY ++I  LC DGK+++A+ +   M   G+ P  + +N L+ G  ++       ELL
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELL 394

Query: 399 HRMDER 404
             M++R
Sbjct: 395 TVMEKR 400


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 209/420 (49%), Gaps = 37/420 (8%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V++Y+T+I+GL + G    A   + EM++          PDAV Y +II  L K  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR------VSPDAVTYNSIIAALSKAQ 60

Query: 75  FVDKAKELLLQMKDKN-------------------------------INPDVVTYNSVIR 103
            +D+A E+L  M   N                               I PDVVTYNS++ 
Sbjct: 61  AMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
             C      EA+++F  M+ +G++P++ T+  ++      G + E   LL LM+Q G++ 
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +  V+N L+  +    +V+    +F  M   G   N  +Y  +I+G CK   ++ A+  +
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M+ KG+ P VV Y +L   L    + E+A +L  E+   G+  +   + T +D LCK 
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE 300

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G ++E+ +LF  L  +    D+ +YS LIDG C +G++  A +L   +    L  D VTY
Sbjct: 301 GRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + +I+  C   +M+ A  LF +ME+ GV PD + +N ++ G  R   T+   EL  R+ E
Sbjct: 361 STLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITE 420



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 171/323 (52%), Gaps = 29/323 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGV-V 55
           EA  +F  +   G +P++ TY TL++G    G     H ++AL +   M   +  F + +
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 56  C-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           C                        P+AV Y T+IDGLCK G +D A     QM DK + 
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VV Y S+I   C  +   +A+ L  E++DQG+ PN+V F+ I+D LCK G++ E+ +L
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +L+  IGV P+   Y+TL+DG+CL G+++ A +L   M S+G K +  +YS LINGYCK
Sbjct: 310 FDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCK 369

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E AL+L+ EM S G+ P ++TYN +  GLF   +   A +L+  +   G   +   
Sbjct: 370 INRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELST 429

Query: 273 YRTFIDGLCKNGYIVEALELFRT 295
           Y   +    K   ++     FRT
Sbjct: 430 YNIILMDFAKTNSLMMHFGCFRT 452



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 190/374 (50%), Gaps = 6/374 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN  TY+++++G C +G +  A+ +F +M +   E      PD V Y +++D LCK G  
Sbjct: 75  PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PDVVTYNSLMDYLCKNGKC 128

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A+++   M  + + PD+ TY +++ G+       E   L   M+  G+Q +   F+++
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K  K++E   +   M Q G+ PNA  Y T++DG C  GR++ A   F  M   G 
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV  Y+ LI+  C   + E A  L  E+L +GI P +V +NT+   L +  +V  + K
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LFD +   GV  D   Y T IDG C  G +  A++L   +  +  + D  +YS LI+G C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K  R++ A  LF  +    +  D++TYNI++H L    +   A +L+  +   G   +  
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELS 428

Query: 377 AFNTLMLGCIRNNE 390
            +N +++   + N 
Sbjct: 429 TYNIILMDFAKTNS 442



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 188/364 (51%), Gaps = 41/364 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+ + G EP+V+TY++L++ LC+ G    A  +F+ M+          KPD  
Sbjct: 95  KAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRG------LKPDIT 148

Query: 62  IYTTIIDGLCKEGFV--------------------------------DKAKELLL---QM 86
            Y T++ G   +G +                                +K  E++L   +M
Sbjct: 149 TYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKM 208

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           + + + P+ V Y +VI G C     ++A   F +M+D+G+ PNVV ++ ++  LC   K 
Sbjct: 209 RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKW 268

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E+A +L+  ++  G+ PN   +NT++D  C  GRV  +K+LF  +  +G   +V +YS L
Sbjct: 269 EKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTL 328

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GYC   +++GA+ L + M+S G+KP  VTY+TL  G  +I+++E A  LF EM+ +GV
Sbjct: 329 IDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGV 388

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y   + GL +      A EL+  +     +L++ +Y+ ++    K+  L + + 
Sbjct: 389 NPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFG 448

Query: 327 LFHS 330
            F +
Sbjct: 449 CFRT 452



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 164/314 (52%), Gaps = 7/314 (2%)

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           D    PDVV+YN++I G     D ++A   + EM+D+ V P+ VT++ I+  L K   M+
Sbjct: 4   DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
            A ++L +M    V PN F YN++M G+C +G+  +A  +F  M S G + +V +Y+ L+
Sbjct: 64  RAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CKN +   A  ++  M+ +G+KP + TY TL  G      +     L   M ++G+ 
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D   +   I    K   + E + +F  +R      +  +Y  +IDGLCK GRL  A   
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  +    L  +VV Y  +IHALC   K +KA +L  ++  +G+ P+ V FNT++    +
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCK 299

Query: 388 NN---ETSKVVELL 398
                E+ K+ +LL
Sbjct: 300 EGRVIESKKLFDLL 313



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V SY+ +I+G  K  +++ A   Y EML + + P  VTYN++   L +   ++RA 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++   M    V  + + Y + + G C +G   +A+ +FR +     E D+ +Y+ L+D L
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK+G+   A ++F S+ +  L  D+ TY  ++H   + G + + HDL   M   G+  D 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
             FN L+    +  +  +VV +  +M ++
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQ 211



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 6/146 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  LF  L   G  P+VITYSTLI+G C  G    A+ L   M++      V  KPD+
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS------VGLKPDS 357

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T+I+G CK   ++ A  L  +M+   +NPD++TYN ++ G      +  AK L+  
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYAR 417

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKM 146
           + + G Q  + T+++I+ +  K   +
Sbjct: 418 ITESGTQLELSTYNIILMDFAKTNSL 443


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 212/400 (53%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+++K  GC P+V+T+++LI+G  + G       L EEM          CK D V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  CK G ++ A      MK + +  +VVT+++ +  FC      EA +LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  T++ ++D  CK G++++A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++  +  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +H+++ A  L  +M   G+  +   Y T +D   K+G + EA+ + + +     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y  LIDGLCK+G +  A   F+ +    L  +V  Y  ++  LC +G +++A  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF +M  KG++ D V +  L+ G ++         L  +M
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 201/435 (46%), Gaps = 45/435 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++     PN  T + ++  L R     +   LFE++            P+  
Sbjct: 140 DAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNVF 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ L  +MK+    PDVVT+NS+I G+    + +E ++L  EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +VVT++ +++  CK G+ME A      M + GV  N   ++T +D FC  G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+   VVTY  L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V  A  +   M++ GV A+   Y T I G   N    +AL L   ++    
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 302 ELDIRSYSCLIDGLC-----------------------------------KSGRLKIAWE 326
           ELDI  Y  LI GLC                                   KSG++  A  
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +       +V+TY  +I  LC  G +D+A   F  M   G+ P+  A+  L+ G  
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 387 RNNETSKVVELLHRM 401
           +N   ++ V+L + M
Sbjct: 550 KNGCLNEAVQLFNEM 564



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A +  T++  L   G +D A   + ++++  + P+  T N ++            +RLF 
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF- 180

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +Q   PNV TF++++D LCK G++ EA  L   M ++G  P+   +N+L+DG+   G
Sbjct: 181 ---EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++  ++L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+   VVT++
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T      +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +   
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              L++ +Y+ L+DGLCK  ++  A ++   + +  + A+ + Y  +IH    +   +KA
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             L  +M+ KG+  D   +  L+ G    ++  +   LL +MDE
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 4/293 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A R    + +  V PN  T + I+  L +    + + +L+  + +    PN F +N +
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIV 194

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  G +  A+ LF  M+ MGC  +V +++ LI+GY K  E++    L  EM   G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  VVTYN L     +  ++E A+  F  M+R GV A+   + TF+D  CK G + EA++
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R+    L+  +Y+CLIDG CK+GRL  A  L   + R  +  +VVTY +++  LC
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + K+ +A D+   ME  GV  + + + TL+ G   N  + K + LL  M  +
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L +++K  G E ++  Y  LI GLC       A +L  +M     E G+  +P+ +
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM----DESGL--EPNYI 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYTT++D   K G V +A  +L ++ D    P+V+TY ++I G C A   +EA   F +M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ PNV  ++ ++D LCKNG + EA QL   M+  G+  +  VY  L+DG+   G +
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI P    YN L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQR 263
                ++  +E A  L DEM+R
Sbjct: 650 ISKYQKLGNLEEAISLQDEMER 671



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 6/158 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F K++  G +PNV  Y+ L++GLC+ G    A+ LF EM++           D V
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL------DKV 574

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT ++DG  K+G +  A  L  +M D  +  D+  Y   I GFC  N   EA+ +F EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           +  G+ P+   ++ ++ +  K G +EEA  L + M ++
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 210/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA    K++  G EPN++TY +LING    G    A  + + M     E GV    + V
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGV--SRNVV 297

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT +I G CK+  +D+A+++L  M+++  + PD   Y  +I G+C     ++A RL  E
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++ N+   + +++  CK G++ EA  ++  M+   ++P+++ YNTL+DG+C  G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L   M   G +  V +Y+ L+ G C+    + AL ++  M+ +G+ P  V Y+T
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF++   E A  L+ ++   G       + T I GLCK G +VEA E+F  ++ L 
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y  LIDG CK+  +  A+++  ++ R  +   +  YN +I  L    ++ +  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DL  +M  +G+ P+ V +  L+ G  +     K       M E
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 7/383 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   G  P++ + ++L+N L + G T  A  ++++MI      G+V  PD  +
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFM 228

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + +++  CK+G VD+A   + +M++  + P++VTY+S+I G+    D   AK +   M 
Sbjct: 229 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMS 288

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV 181
           ++GV  NVVT+++++   CK  KM+EA ++L  M  +  + P+   Y  L+DG+C TG++
Sbjct: 289 EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKI 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M  +G K N+F  + LINGYCK  EI  A  + + M+   +KP   +YNTL
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G         AF L D+M + G+      Y T + GLC+ G   +AL+++  +     
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   YS L+DGL K    + A  L+  +         +T+N MI  LC  GKM +A +
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F  M+  G +PD + + TL+ G
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDG 551



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 217/403 (53%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G  P+V   S ++N  C+ G    A    ++M N     GV  +P+ V 
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----LGV--EPNIVT 263

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++I+G    G V+ AK +L  M +K ++ +VVTY  +I+G+C     +EA+++   M 
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+   + V++D  C+ GK+++A +LL+ M+++G++ N F+ N+L++G+C  G +
Sbjct: 324 EEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEI 383

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +   M     K + +SY+ L++GYC+      A +L  +ML +GI+PTV+TYNTL
Sbjct: 384 HEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTL 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  +   + A +++  M + GVA D   Y T +DGL K      A  L++ +     
Sbjct: 444 LKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                +++ +I GLCK G++  A E+F  +       D +TY  +I   C    + +A  
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   ME + ++P    +N+L+ G  ++    +V +LL  M  R
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 38/434 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L+  + A G   + IT++T+I+GLC+ G  + A  +F++M +      + C PD + 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD------LGCSPDGIT 544

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG CK   V +A ++   M+ + I+P +  YNS+I G   +    E   L  EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+VT+  ++D  CK G +++A      M + G+  N  + +T++ G    GR++
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 183 RAKELFVSMESMG----------------------------CK----HNVFSYSILINGY 210
            A  L   M   G                            CK     N   Y+I I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A   +S +  KG  P   TY TL  G      V+ AF+L DEM R G+  + 
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+GLCK+  +  A  LF  L       ++ +Y+ LIDG CK G +  A++L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +   VVTY+ +I+ LC  G ++++  L   M   GV    + + TL+ G IR+ E
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904

Query: 391 TSKVVELLHRMDER 404
             K+ +L   M  R
Sbjct: 905 MQKIHKLYDMMHIR 918



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 184/389 (47%), Gaps = 61/389 (15%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA---------------LNLFEEM 45
           +EA  +F K+K  GC P+ ITY TLI+G C+  +   A               + ++  +
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 583

Query: 46  INGN-------------GEFGVV-CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           I+G               E G+    P+ V Y  +IDG CKEG +DKA     +M +  +
Sbjct: 584 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-------------------------- 125
           + +++  ++++ G       +EA  L  +M+D G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 126 ------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +++ +  LCK GK+++A +   ++   G  P+ F Y TL+ G+   G
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P VVTYN
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G  +I  ++ AFKL D+M   G++     Y   I+GLCK+G I  +++L   +   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELF 328
             +  +  Y  L+ G  +SG ++   +L+
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 187/390 (47%), Gaps = 22/390 (5%)

Query: 16  EPNVITYSTLINGLCRT---GHTIVALN--------------LFEEMINGNGEFGVVCKP 58
            PNV +Y  L++ L R      T   LN              +++E++    EF      
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF---- 154

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              ++  I+    ++G    A  +   M      P + + NS++       +++ A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G+ P+V   S++++  CK+GK++EA+  ++ M  +GV PN   Y++L++G+   
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVT 237
           G V  AK +   M   G   NV +Y++LI GYCK  +++ A  +   M  +  + P    
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G     +++ A +L DEM R G+  + +   + I+G CK G I EA  +   + 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  SY+ L+DG C+ G    A+ L   + +  +   V+TYN ++  LC  G  D
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            A  ++  M  +GVAPD V ++TL+ G  +
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFK 484



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 168/340 (49%), Gaps = 9/340 (2%)

Query: 70  LCKEGFVDKAK----ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           LCK  F D+      EL+   ++   +P V  ++ +++ +     +  A  +F  M   G
Sbjct: 131 LCK--FKDRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFDNMGKCG 186

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P++ + + +++ L KNG+   A  + + MI++G+ P+ F+ + +++ FC  G+V+ A 
Sbjct: 187 RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAA 246

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
                ME++G + N+ +Y  LINGY    ++E A  +   M  KG+   VVTY  L  G 
Sbjct: 247 GFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306

Query: 246 FEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            +  +++ A K+   MQ    +  D  AY   IDG C+ G I +A+ L   +  L  + +
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +   + LI+G CK G +  A  +   +    L  D  +YN ++   C +G   +A +L  
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 426

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M  +G+ P  + +NTL+ G  R       +++ H M +R
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 122/225 (54%), Gaps = 6/225 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN I Y+  I GLC+TG    A   F  M++  G       PD   Y T+I G    G V
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFV-----PDNFTYCTLIHGYSAAGNV 765

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  L  +M  + + P++VTYN++I G C + + + A+RLF ++  +G+ PNVVT++ +
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK G M+ A +L + MI+ G+ P+   Y+ L++G C  G + R+ +L   M   G 
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              +  Y  L+ GY ++ E++    LY  M  + +  T +++  +
Sbjct: 886 DSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F +I+    + G  + A  + + M + G  P+    N+L++     G  + A  ++  M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G   +VF  SI++N +CK+ +++ A     +M + G++P +VTY++L  G   +  VE
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  +   M   GV+ +                                   + +Y+ LI
Sbjct: 279 AAKGVLKFMSEKGVSRN-----------------------------------VVTYTLLI 303

Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G CK  ++  A ++   +     L+ D   Y ++I   C  GK+D A  L  +M   G+
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +    N+L+ G  +  E  +   ++ RM + N
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 196/364 (53%), Gaps = 6/364 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +L +  C+P VITY+ LI      G    AL L +EM++         KPD   
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFT 265

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G+CKEG VD+A E++  ++ K   PDV++YN ++R         E ++L  +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PNVVT+S+++  LC++GK+EEA  LL+LM + G+ P+A+ Y+ L+  FC  GR++
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E   +M S GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P   +YNT+F
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L+      RA  +  EM  +G+  D   Y + I  LC+ G + EA EL   +R  +  
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ ++ G CK+ R++ A  +  S+       +  TY ++I  +   G   +A +L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565

Query: 363 FLDM 366
             D+
Sbjct: 566 ANDL 569



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 206/401 (51%), Gaps = 7/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  L   +   G  P+VI  + LI G     +   A+ + E +     +FG   +PD 
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL----EKFG---QPDV 158

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+G CK   +D A  +L +M+ K+ +PD VTYN +I   C     + A ++  +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++    QP V+T++++++     G ++EA +L++ M+  G++P+ F YNT++ G C  G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+RA E+  ++E  GC+ +V SY+IL+       + E    L ++M S+   P VVTY+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L    ++E A  L   M+  G+  D ++Y   I   C+ G +  A+E   T+    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  DI +Y+ ++  LCK+G+   A E+F  L       +  +YN M  AL + G   +A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + L+M + G+ PD + +N+++    R     +  ELL  M
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 7/352 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G+ I +L+L E M+           PD ++ T +I G      + KA  ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
              PDV  YN++I GFC  N  ++A R+   M  +   P+ VT+++++  LC  GK++ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++L  ++    +P    Y  L++   L G V+ A +L   M S G K ++F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A  +   +  KG +P V++YN L   L    + E   KL  +M       +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   I  LC++G I EA+ L + ++      D  SY  LI   C+ GRL +A E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           ++     + D+V YN ++  LC +GK D+A ++F  +   G +P+  ++NT+
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 177/333 (53%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G   ++  LL  M  K  NPDV+    +I+GF    +  +A R+ +E++++  QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++ +++  CK  ++++A+++L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+RAF++   ++  G   D  +Y   +  L   G   E  +L   +   KC+ ++ +YS 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G+++ A  L   +    L  D  +Y+ +I A C +G++D A +    M + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD V +NT++    +N +  + +E+  ++ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 36/301 (11%)

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I    C++G   E+  LLE M++ G  P+  +   L+ GF     + +A  +   +E  G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF----------IGL 245
            + +VF+Y+ LING+CK   I+ A  +   M SK   P  VTYN +           + L
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 246 FEIHQ-------------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             ++Q                         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G +  A E+ R L +  CE D+ SY+ L+  L   G+ +   +L   +       +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTY+I+I  LC DGK+++A +L   M+ KG+ PD  +++ L+    R       +E L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 401 M 401
           M
Sbjct: 394 M 394



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 7/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F KL   GC PN  +Y+T+ + L  +G  I AL++  EM++ NG       PD +
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NG-----IDPDEI 474

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I  LC+EG VD+A ELL+ M+    +P VVTYN V+ GFC A+   +A  +   M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PN  T++V+++ +   G   EA +L   +++I    + + +  L   F L   +
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNVL 593

Query: 182 NRAKELF 188
            R+ + F
Sbjct: 594 QRSSQTF 600



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++ + G +P+ ITY+++I+ LCR G    A  L  +M   + EF     P  
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEF----HPSV 508

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           V Y  ++ G CK   ++ A  +L  M      P+  TY  +I G  +A    EA  L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 233/496 (46%), Gaps = 97/496 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF  +K  GC PNV  ++ LI+GLC++G    A  LF+ M               I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  + G +              C PD   Y T+I GLC +   ++A+ELL     +   
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 274

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P VVT+ ++I G+C A   ++A R+  +MM    + ++  F  +++ L K  +++EA +L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P V+TY TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 273 YRTFIDGLCKNGYIVEALEL------------FRTL------------------RILK-- 300
           Y    D LCK G   EA               + TL                  R++   
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RG---------VLIADVV--------- 341
           C  D  +YS L+  LCK  RL  A  +   +  RG         +LI +++         
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574

Query: 342 ----------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                           TY + I++ C +G+++ A DL L ME +GVAPD V +N L+ GC
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 634

Query: 386 IRNNETSKVVELLHRM 401
                  +    L RM
Sbjct: 635 GHMGYIDRAFSTLKRM 650



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 218/451 (48%), Gaps = 56/451 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A G  PNVITY+++I+G C++G   +AL + + M+  +G     C+P+A 
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDG-----CQPNAW 383

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GL K+  + KA  LL +M+   I P+V+TY ++++G C  +D + A RLF EM
Sbjct: 384 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 442

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEA------------------------------- 149
           M+Q G++P+   ++V+ D LCK G+ EEA                               
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 502

Query: 150 -SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 562

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP+  TY        +  ++E A  L  +M+R GVA 
Sbjct: 563 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 622

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK----------- 317
           D   Y   IDG    GYI  A    + +    CE +  +Y  L+  L K           
Sbjct: 623 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 682

Query: 318 SG-----RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           SG      L I W+L   + +  L   V TY+ +I   C  G++++A  L   M  KG++
Sbjct: 683 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 742

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           P+   +  L+  C       K +  +  M E
Sbjct: 743 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 773



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 193/398 (48%), Gaps = 7/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++++L   G  P+ +TY+T+I   C+ G    A   F  ++ G  E      P+      
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNA 108

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G C+ G + KA  L L M       +  +Y  +I+G C A    +A  LF+ M   G
Sbjct: 109 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 168

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNV  F+ ++  LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A 
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 228

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   ME  GC  + ++Y+ LI G C  K  E A  L +  + +G  PTVVT+  L  G 
Sbjct: 229 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 287

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               + + A ++ ++M       D   +   I+ L K   + EA EL   +       ++
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +IDG CKSG++ IA E+   + R     +  TYN +++ L  D K+ KA  L   
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+  G+ P+ + + TL+ G    ++      L   M++
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 193/413 (46%), Gaps = 25/413 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  PNVITY+TL+ G C       A  LFE M+  NG      KPD  
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEH 453

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  + D LCK G  ++A   +++   K +    V Y ++I GF  A +++ A  L   M
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+  T+SV++  LCK  ++ EA  +L+ M   G++   F Y  L+D     G+ 
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 570

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK ++  M S G K +  +Y++ IN YCK   +E A  L  +M  +G+ P VVTYN L
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN--GYIVEA--------LE 291
             G   +  ++RAF     M       + W Y   +  L K    Y+           +E
Sbjct: 631 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 690

Query: 292 LFRTLRILK------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           L  T ++L+          + +YS LI G CK+GRL+ A  L   +    L  +   Y +
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I   C     +KA      M   G  P   ++  L++G     +  KV  L 
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 803



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 22/324 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G +  +  Y+ LI+ + R G    A  ++ EM +         KP A 
Sbjct: 537 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 590

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  I+  CKEG ++ A++L+L+M+ + + PDVVTYN +I G  +    + A      M
Sbjct: 591 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 650

Query: 122 MDQGVQPNVVTFSVIMDELCKNG----------------KMEEASQLLELMIQIGVRPNA 165
           +    +PN  T+ +++  L K                  +++   QLLE M++ G+ P  
Sbjct: 651 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 710

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 711 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 770

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P + +Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 771 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 830

Query: 286 IVEALELFRTLRILKCELDIRSYS 309
           +    ++   +    C +  ++Y+
Sbjct: 831 VDICFQMLSIMEKRYCCISSQTYA 854



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 156/382 (40%), Gaps = 57/382 (14%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y+TLI+G  + G+T  A  L E MI+        C PD+  Y+ ++  LCK+  +++A
Sbjct: 485 VYYTTLIDGFSKAGNTDFAATLIERMIDEG------CTPDSYTYSVLLHALCKQKRLNEA 538

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             +L QM  + I   +  Y  +I         + AKR++ EM   G +P+  T++V ++ 
Sbjct: 539 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 598

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK G++E+A  L+  M + GV P+   YN L+DG    G ++RA      M    C+ N
Sbjct: 599 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658

Query: 200 ---------------------------------------------------VFSYSILIN 208
                                                              V +YS LI 
Sbjct: 659 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 718

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+CK   +E A  L   M  KG+ P    Y  L     +    E+A      M   G   
Sbjct: 719 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 778

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +YR  + GLC  G   +   LF  L  L    D  ++  L DGL K+G + I +++ 
Sbjct: 779 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838

Query: 329 HSLPRGVLIADVVTYNIMIHAL 350
             + +        TY ++ + +
Sbjct: 839 SIMEKRYCCISSQTYALVTNKM 860



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%)

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A++  R     +  L  + Y+  +  L +    +    ++  L +  L+ D VTYN M
Sbjct: 15  ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 74

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I + C +G +  AH  F  +   G+ P+    N L+LG  R  E  K   L   M
Sbjct: 75  IKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 129


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 196/364 (53%), Gaps = 6/364 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +L +  C+P VITY+ LI      G    AL L +EM++         KPD   
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFT 265

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G+CKEG VD+A E++  ++ K   PDV++YN ++R         E ++L  +M 
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PNVVT+S+++  LC++GK+EEA  LL+LM + G+ P+A+ Y+ L+  FC  GR++
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E   +M S GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P   +YNT+F
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L+      RA  +  EM  +G+  D   Y + I  LC+ G + EA EL   +R  +  
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ ++ G CK+ R++ A  +  S+       +  TY ++I  +   G   +A +L
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565

Query: 363 FLDM 366
             D+
Sbjct: 566 ANDL 569



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 196/400 (49%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   L+ FG +P+V  Y+ LING C+      A  + + M + +        PD V
Sbjct: 142 KAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTV 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC  G +D A ++L Q+   N  P V+TY  +I         +EA +L  EM
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P++ T++ I+  +CK G ++ A +++  +   G  P+   YN L+      G+ 
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKW 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              ++L   M S  C  NV +YSILI   C++ +IE A++L   M  KG+ P   +Y+ L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   +++ A +  + M   G   D   Y T +  LCKNG   +ALE+F  L  + C
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  SY+ +   L  SG    A  +   +    +  D +TYN MI  LC +G +D+A +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L +DM +    P  V +N ++LG  + +     + +L  M
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 187/372 (50%), Gaps = 7/372 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           CR+G+ I +L+L E M+           PD ++ T +I G      + KA  ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
              PDV  YN++I GFC  N  ++A R+   M  +   P+ VT+++++  LC  GK++ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++L  ++    +P    Y  L++   L G V+ A +L   M S G K ++F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A  +   +  KG +P V++YN L   L    + E   KL  +M       +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y   I  LC++G I EA+ L + ++      D  SY  LI   C+ GRL +A E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           ++     + D+V YN ++  LC +GK D+A ++F  +   G +P+  ++NT+      + 
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 390 ETSKVVELLHRM 401
           +  + + ++  M
Sbjct: 453 DKIRALHMILEM 464



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 177/333 (53%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G   ++  LL  M  K  NPDV+    +I+GF    +  +A R+ +E++++  QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++ +++  CK  ++++A+++L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+RAF++   ++  G   D  +Y   +  L   G   E  +L   +   KC+ ++ +YS 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G+++ A  L   +    L  D  +Y+ +I A C +G++D A +    M + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD V +NT++    +N +  + +E+  ++ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 36/301 (11%)

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I    C++G   E+  LLE M++ G  P+  +   L+ GF     + +A  +   +E  G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF----------IGL 245
            + +VF+Y+ LING+CK   I+ A  +   M SK   P  VTYN +           + L
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 246 FEIHQ-------------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             ++Q                         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G +  A E+ R L +   E D+ SY+ L+  L   G+ +   +L   +       +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTY+I+I  LC DGK+++A +L   M+ KG+ PD  +++ L+    R       +E L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 401 M 401
           M
Sbjct: 394 M 394



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 7/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F KL   GC PN  +Y+T+ + L  +G  I AL++  EM++ NG       PD +
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NG-----IDPDEI 474

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I  LC+EG VD+A ELL+ M+    +P VVTYN V+ GFC A+   +A  +   M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PN  T++V+++ +   G   EA +L   +++I    + + +  L   F L   +
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNVL 593

Query: 182 NRAKELF 188
            R+ + F
Sbjct: 594 QRSSQTF 600



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++ + G +P+ ITY+++I+ LCR G    A  L  +M   + EF     P  
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEF----HPSV 508

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           V Y  ++ G CK   ++ A  +L  M      P+  TY  +I G  +A    EA  L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 233/496 (46%), Gaps = 97/496 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF  +K  GC PNV  ++ LI+GLC++G    A  LF+ M               I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 47  NGNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            G  + G +              C PD   Y T+I GLC +   ++A+ELL     +   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 389

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P VVT+ ++I G+C A   ++A R+  +MM    + ++  F  +++ L K  +++EA +L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P V+TY TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 273 YRTFIDGLCKNGYIVEALEL------------FRTL------------------RILK-- 300
           Y    D LCK G   EA               + TL                  R++   
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RG---------VLIADVV--------- 341
           C  D  +YS L+  LCK  RL  A  +   +  RG         +LI +++         
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 342 ----------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                           TY + I++ C +G+++ A DL L ME +GVAPD V +N L+ GC
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 386 IRNNETSKVVELLHRM 401
                  +    L RM
Sbjct: 750 GHMGYIDRAFSTLKRM 765



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 218/451 (48%), Gaps = 56/451 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A G  PNVITY+++I+G C++G   +AL + + M+  +G     C+P+A 
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK-MMERDG-----CQPNAW 498

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ GL K+  + KA  LL +M+   I P+V+TY ++++G C  +D + A RLF EM
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 557

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEA------------------------------- 149
           M+Q G++P+   ++V+ D LCK G+ EEA                               
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 150 -SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP+  TY        +  ++E A  L  +M+R GVA 
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK----------- 317
           D   Y   IDG    GYI  A    + +    CE +  +Y  L+  L K           
Sbjct: 738 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 797

Query: 318 SG-----RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           SG      L I W+L   + +  L   V TY+ +I   C  G++++A  L   M  KG++
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           P+   +  L+  C       K +  +  M E
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 193/398 (48%), Gaps = 7/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++++L   G  P+ +TY+T+I   C+ G    A   F  ++ G  E      P+      
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNA 223

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G C+ G + KA  L L M       +  +Y  +I+G C A    +A  LF+ M   G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNV  F+ ++  LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A 
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   ME  GC  + ++Y+ LI G C  K  E A  L +  + +G  PTVVT+  L  G 
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               + + A ++ ++M       D   +   I+ L K   + EA EL   +       ++
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +IDG CKSG++ IA E+   + R     +  TYN +++ L  D K+ KA  L   
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+  G+ P+ + + TL+ G    ++      L   M++
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 193/413 (46%), Gaps = 25/413 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  PNVITY+TL+ G C       A  LFE M+  NG      KPD  
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEH 568

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  + D LCK G  ++A   +++   K +    V Y ++I GF  A +++ A  L   M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+  T+SV++  LCK  ++ EA  +L+ M   G++   F Y  L+D     G+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK ++  M S G K +  +Y++ IN YCK   +E A  L  +M  +G+ P VVTYN L
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN--GYIVEA--------LE 291
             G   +  ++RAF     M       + W Y   +  L K    Y+           +E
Sbjct: 746 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 292 LFRTLRILK------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           L  T ++L+          + +YS LI G CK+GRL+ A  L   +    L  +   Y +
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I   C     +KA      M   G  P   ++  L++G     +  KV  L 
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 22/324 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G +  +  Y+ LI+ + R G    A  ++ EM +         KP A 
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 705

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  I+  CKEG ++ A++L+L+M+ + + PDVVTYN +I G  +    + A      M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 122 MDQGVQPNVVTFSVIMDELCKNG----------------KMEEASQLLELMIQIGVRPNA 165
           +    +PN  T+ +++  L K                  +++   QLLE M++ G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P + +Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 286 IVEALELFRTLRILKCELDIRSYS 309
           +    ++   +    C +  ++Y+
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYA 969



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 156/382 (40%), Gaps = 57/382 (14%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           + Y+TLI+G  + G+T  A  L E MI+        C PD+  Y+ ++  LCK+  +++A
Sbjct: 600 VYYTTLIDGFSKAGNTDFAATLIERMIDEG------CTPDSYTYSVLLHALCKQKRLNEA 653

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             +L QM  + I   +  Y  +I         + AKR++ EM   G +P+  T++V ++ 
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK G++E+A  L+  M + GV P+   YN L+DG    G ++RA      M    C+ N
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773

Query: 200 ---------------------------------------------------VFSYSILIN 208
                                                              V +YS LI 
Sbjct: 774 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+CK   +E A  L   M  KG+ P    Y  L     +    E+A      M   G   
Sbjct: 834 GFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +YR  + GLC  G   +   LF  L  L    D  ++  L DGL K+G + I +++ 
Sbjct: 894 QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953

Query: 329 HSLPRGVLIADVVTYNIMIHAL 350
             + +        TY ++ + +
Sbjct: 954 SIMEKRYCCISSQTYALVTNKM 975



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%)

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A++  R     +  L  + Y+  +  L +    +    ++  L +  L+ D VTYN M
Sbjct: 130 ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 189

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I + C +G +  AH  F  +   G+ P+    N L+LG  R  E  K   L   M
Sbjct: 190 IKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC+P+  TY+ LI  LC  G    A NLF+EMI         CKP+  
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG------CKPNVH 337

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLC++G +++A  +  +M    I P V+TYN++I G+C       A  L   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +PNV TF+ +M+ LC+ GK  +A  LL+ M+  G+ P+   YN L+DG C  G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +L  SM     + +  +++ +IN +CK  + + A +    ML KGI    VT  TL
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ ++ +   A  + + + +  +     +    +D L K   + E L +   +  L  
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ L+DGL +SG +  ++ +   +     + +V  Y I+I+ LC  G++++A  
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M+  GV+P+ V +  ++ G + N +  + +E +  M ER
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 28/391 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L T ++   C+PNV T++ L+ GLCR G    A++L + M++ NG       PD 
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDI 441

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +IDGLC+EG ++ A +LL  M   +I PD +T+ ++I  FC    ++ A      
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+  + VT + ++D +CK GK  +A  +LE ++++ +       N ++D      +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V     +   +  +G   +V +Y+ L++G  ++ +I G+  +   M   G  P V  Y  
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +VE A KL   MQ  GV+ +   Y   + G   NG +  ALE  R +    
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681

Query: 301 CELDIRSYSCLIDGLCKSGR----------LKIAW---------ELFHSLPR-GVLIADV 340
            EL+ R YS L+ G   S +            IA          EL   + + G  I+ +
Sbjct: 682 YELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGL 741

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
             +  ++  LC +G+ D+++DL  ++  +GV
Sbjct: 742 CIF--LVTRLCKEGRTDESNDLVQNVLERGV 770



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 1/286 (0%)

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +  M   G    ++ +  I++ LCKNG  E A   +  +++IG   ++ +  +L+ GFC 
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 178 TGRVNRAKELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              +  A ++F V  + + C  N  SYSILI+G C+   +E A  L  +M  KG +P+  
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L   L +   +++AF LFDEM   G   +   Y   IDGLC++G I EA  + R +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
              +    + +Y+ LI+G CK GR+  A+EL   + +     +V T+N ++  LC  GK 
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            KA  L   M   G++PD V++N L+ G  R    +   +LL  M+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 147/361 (40%), Gaps = 85/361 (23%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFE------------------- 43
           A+A    +   G   + +T +TLI+G+C+ G T  AL + E                   
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554

Query: 44  ------------EMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                        M+    + G+V  P  V YTT++DGL + G +  +  +L  MK    
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P+V  Y  +I G C      EA++L   M D GV PN VT++V++     NGK++ A +
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGR-VNRAKELFVS------------------ME 192
            +  M++ G   N  +Y++L+ GF L+ + ++ ++E  VS                  +E
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732

Query: 193 SMG--------------CK-----------HNVF--------SYSILINGYCKNKEIEGA 219
            +G              CK            NV         +  I++  YC  K+    
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKC 792

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L + +L  G  P+  ++  +  GL +    ERA +L  E+       +     T+++ 
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVEC 852

Query: 280 L 280
           L
Sbjct: 853 L 853



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 40/210 (19%)

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +     Y++L + L ++     A+  +  M+  G       YRT ++ LCKNGY  EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213

Query: 290 LELFRTLRILK--------------------------------------CELDIRSYSCL 311
            E+F + +ILK                                      C  +  SYS L
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I GLC+ GRL+ A+ L   +          TY ++I ALC  G +DKA +LF +M  +G 
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            P+   +  L+ G  R+ +  +   +  +M
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 217/405 (53%), Gaps = 8/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   + K++  G  P+V    T+I G  +      AL LF+E      E G+    +  
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF----ETGLA---NVF 444

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +  TI+  LCK+G  D+A ELL +M+ + I P+VV+YN+V+ G C   + + A+ +F  +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++PN  T+S+++D   +N   + A +++  M    +  N  VY T+++G C  G+ 
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++A+EL  +M E      +  SY+ +I+G+ K  E++ A++ Y EM   GI P V+TY +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + +++++A ++ DEM+  GV  D  AY   IDG CK   +  A  LF  L    
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                  Y+ LI G    G +  A +L+  + +  L  D+ TY  +I  L  DG +  A 
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +L+ +M+A G+ PD + +  ++ G  +  +  KVV++   M + N
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 214/397 (53%), Gaps = 7/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L +K+++ G  PNV++Y+ ++ G CR  +  +A  +F  ++    E G+  KP+  
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL----EKGL--KPNNY 514

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  +      A E++  M   NI  + V Y ++I G C    +++A+ L   M
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++  +  + ++++ I+D   K G+M+ A    E M   G+ PN   Y +LM+G C   R
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A E+   M++ G K ++ +Y  LI+G+CK   +E A +L+SE+L +G+ P+   YN+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A  L+ +M + G+  D   Y T IDGL K+G ++ A EL+  ++ + 
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D   Y+ +++GL K G+     ++F  + +  +  +V+ YN +I     +G +D+A 
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            L  +M  KG+ PD   F+ L+ G + N +  +   L
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 209/428 (48%), Gaps = 43/428 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + ++    G EP+ + YS  +   C+T    +A +L  EM         +C P   
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK-----LCVPSQE 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I    K+G +D A  L  +M    I+ +VV   S+I G C  ND   A  LF +M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP------------------ 163
             +G  PN VTFSV+++   KNG+ME+A +  + M  +G+ P                  
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425

Query: 164 ----------------NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                           N FV NT++   C  G+ + A EL   MES G   NV SY+ ++
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G+C+ K ++ A  ++S +L KG+KP   TY+ L  G F  H  + A ++ + M    + 
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR--SYSCLIDGLCKSGRLKIAW 325
            +   Y+T I+GLCK G   +A EL   + I +  L +   SY+ +IDG  K G +  A 
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANM-IEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG- 384
             +  +    +  +V+TY  +++ LC + +MD+A ++  +M+ KGV  D  A+  L+ G 
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664

Query: 385 CIRNNETS 392
           C R+N  S
Sbjct: 665 CKRSNMES 672



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 24/414 (5%)

Query: 3   AAALFTKL----KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           A+ L +KL    K+FG E N   ++ L+N   +   T  A+++  +M+    E  V+  P
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQML----ELDVI--P 196

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
                   +  L +   + +AKEL  +M    ++ D VT   ++R         EA  + 
Sbjct: 197 FFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVL 256

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-RPNAFVYNTLMDGFCL 177
              +++G +P+ + +S+ +   CK   +  A+ LL  M +  +  P+   Y +++     
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G ++ A  L   M S G   NV + + LI G+CKN ++  AL L+ +M  +G  P  VT
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT-- 295
           ++ L     +  ++E+A + + +M+  G+    +   T I G  K     EAL+LF    
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF 436

Query: 296 ----LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
                 +  C       + ++  LCK G+   A EL   +    +  +VV+YN ++   C
Sbjct: 437 ETGLANVFVC-------NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               MD A  +F ++  KG+ P+   ++ L+ GC RN++    +E+++ M   N
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 222/476 (46%), Gaps = 79/476 (16%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ A GC PNV+ Y+TLI    +      A+ + +EM     E G+   PD   
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM----REQGIA--PDTFC 492

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y ++I GL K   +D+A+  LL+M +    PD  TY + I G+  A +   A +   EM+
Sbjct: 493 YNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552

Query: 123 DQGVQPNVV-----------------------------------TFSVIMDELCKNGKME 147
           + GV PN V                                   T++V+M+ L KNGK+ 
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A ++   M   G+ P+ F Y TL+DGF   G + +A  +F  M   G   NV  Y++L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G+C++ EIE A  L  EM  KG  P  VTY T+  G  +   +  AF+LFDEM+  G+ 
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRT-------------------LRILKCELDIR-- 306
            D++ Y T +DG C+   +  A+ +F T                    +  K EL     
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMI 792

Query: 307 -----------------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                            +Y+ +ID LCK G L+ A ELFH + +  L+  V+TY  +++ 
Sbjct: 793 NRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNG 852

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               G+  +   +F ++ A G+ PD + ++ ++   ++   T+K + LL +M  +N
Sbjct: 853 YDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKN 908



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 205/431 (47%), Gaps = 33/431 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           +A +L  ++ + G   + + YS LI+GL +  +   A  L  EM+               
Sbjct: 298 DAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFI 357

Query: 47  ----------------NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                           +G   FGV   P A  Y ++I+G  +E  V K  ELL+++K +N
Sbjct: 358 CVMSKEGAMEKAKALFDGMITFGVT--PGARAYASLIEGFFREKNVRKGYELLVEIKKRN 415

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I     TY + ++G C + D + A  +  EM   G +PNVV ++ ++    +  +  +A 
Sbjct: 416 IVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAV 475

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++L+ M + G+ P+ F YN+L+ G     +++ A+   + M   G K + F+Y   I+GY
Sbjct: 476 RVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGY 535

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  E   A     EML  G+ P  V    L     +  +V  A   F  M   G+  D 
Sbjct: 536 IEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   ++GL KNG + +A E+F  +R      D+ SY  LIDG  K G ++ A  +F  
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L ++V+ YN+++   C  G+++KA +L  +M  KG  P+ V + T++ G  ++ +
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 391 TSKVVELLHRM 401
            ++  +L   M
Sbjct: 716 LAEAFQLFDEM 726



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 13/366 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN +  + LIN  C+ G  I A + F  M+    E G++   DA  YT +++GL K 
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMV----EQGIL--GDAKTYTVLMNGLVKN 608

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+ A+E+  +M+ K I PDV +Y ++I GF    +  +A  +F EM+  G+  NV+ +
Sbjct: 609 GKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY 668

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++   C++G++E+A +LL+ M   G  PNA  Y T++DG+C +G +  A +LF  M+ 
Sbjct: 669 NMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL 728

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   + F Y+ L++G C+  ++E A++++ E   KG   +   +N L   +F+  + E 
Sbjct: 729 KGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTEL 787

Query: 254 AFKLFDEM-----QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
              + + +      + G   D   Y   ID LCK G +  A ELF  ++       + +Y
Sbjct: 788 TTDMINRLMDGSFDKFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITY 846

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + L++G  K GR    + +F  +    +  D + Y+++I+A   +G   KA  L   M A
Sbjct: 847 TSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFA 906

Query: 369 KGVAPD 374
           K    D
Sbjct: 907 KNAVDD 912



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 181/405 (44%), Gaps = 51/405 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA + F  +   G   +  TY+ L+NGL + G    A  +F EM  G G       PD 
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM-RGKG-----IAPDV 630

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+IDG  K G + KA  +  +M    +  +V+ YN ++ GFC + +  +AK L  E
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PN VT+  I+D  CK+G + EA QL + M   G+ P++FVY TL+DG C    
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750

Query: 181 VNRAKELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F + E  GC                                       K N  
Sbjct: 751 VERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+  M    + PTV+TY +L  G  ++ +    F +FDE+
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-----CELDIRSYSCLIDGLC 316
              G+  D   Y   I+   K G   +AL L   +         C+L I +   L+ G  
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFA 929

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           K G +++A ++  ++ R   I D  T   +I+  C       A D
Sbjct: 930 KVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 188/435 (43%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G  P+  +Y+ LI+GLC+      A +L  EM N  G F      D V
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM-NSVGLFA-----DNV 316

Query: 62  IYTTIIDGL-----------------------------------CKEGFVDKAKELLLQM 86
            Y+ +IDGL                                    KEG ++KAK L   M
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM 376

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
               + P    Y S+I GF    +  +   L +E+  + +  +  T+   +  +C +G +
Sbjct: 377 ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDL 436

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A  +++ M   G RPN  +Y TL+  F    R   A  +   M   G   + F Y+ L
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G  K K+++ A S   EM+  G KP   TY     G  E  +   A K   EM   GV
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +       I+  CK G ++EA   FR++       D ++Y+ L++GL K+G++  A E
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE 616

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +FH +    +  DV +Y  +I      G M KA  +F +M   G+  + + +N L+ G  
Sbjct: 617 IFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676

Query: 387 RNNETSKVVELLHRM 401
           R+ E  K  ELL  M
Sbjct: 677 RSGEIEKAKELLDEM 691



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 199/436 (45%), Gaps = 54/436 (12%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLF----EEMINGNGEFGV----------VCK---PDA 60
           +V +Y  LI   CR G+  +A ++     EE+  G     V           CK   P  
Sbjct: 223 DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEEL--GTATLNVDEALELKKSMSCKGLVPSR 280

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +IDGLCK+  ++ AK LL++M    +  D V Y+ +I G     +++ A  L  E
Sbjct: 281 QSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHE 340

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G   + + +   +  + K G ME+A  L + MI  GV P A  Y +L++GF     
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +  EL V ++      + ++Y   + G C + +++GA ++  EM + G +P VV Y T
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTT 460

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK----------------NG 284
           L     +  +   A ++  EM+  G+A DT+ Y + I GL K                NG
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520

Query: 285 Y-------------IVEALELFRTLR----ILKCELDIRSYSC--LIDGLCKSGRLKIAW 325
           +              +EA E     +    +L+C +      C  LI+  CK G++  A 
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
             F S+    ++ D  TY ++++ L  +GK++ A ++F +M  KG+APD  ++ TL+ G 
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640

Query: 386 IRNNETSKVVELLHRM 401
            +     K   +   M
Sbjct: 641 SKLGNMQKASSIFDEM 656



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 167/385 (43%), Gaps = 22/385 (5%)

Query: 25  LINGLCRTGHTIVAL------NLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
           L+  L R  H + AL      +LF ++  G  E  VV   D   Y  +I   C++G V  
Sbjct: 185 LVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVF--DVQSYEMLIGAHCRDGNVQL 242

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           AK++LL+ +++       T N            +EA  L   M  +G+ P+  ++++++D
Sbjct: 243 AKDVLLKTEEE---LGTATLNV-----------DEALELKKSMSCKGLVPSRQSYNLLID 288

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCK  ++E+A  LL  M  +G+  +   Y+ L+DG       + A  L   M S G   
Sbjct: 289 GLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSI 348

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +   Y   I    K   +E A +L+  M++ G+ P    Y +L  G F    V + ++L 
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            E+++  +    + Y T + G+C +G +  A  + + +    C  ++  Y+ LI    + 
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            R   A  +   +    +  D   YN +I  L    KMD+A    L+M   G  PD   +
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
              + G I   E +   + +  M E
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLE 553



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 165/347 (47%), Gaps = 18/347 (5%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN--PDVVTYNSVIRGFCYANDSNEAKRLF 118
           +++  +IDG  ++GF+D+A  +    KD +++  P +   N ++      N  +    ++
Sbjct: 153 LLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVY 212

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ-LLELMIQIGVRPNAFVYNTLMDGFCL 177
             M+++ V  +V ++ +++   C++G ++ A   LL+   ++G                 
Sbjct: 213 KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTA--------------- 257

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           T  V+ A EL  SM   G   +  SY++LI+G CK K +E A SL  EM S G+    V 
Sbjct: 258 TLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ L  GL +    + A  L  EM  HG + D   Y  FI  + K G + +A  LF  + 
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                   R+Y+ LI+G  +   ++  +EL   + +  ++    TY   +  +C+ G +D
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A+++  +M A G  P+ V + TL+   ++ +     V +L  M E+
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQ 484



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 31/338 (9%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC  G ++KA  ++++M ++   P    ++S++R            R F+   D      
Sbjct: 107 LCNFGSIEKAHSVVIRMIERKW-PVAEVWSSIVRCL----------REFVGKSDD----R 151

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           V+ F +++D   + G ++EA  +      + + + P+    N L+D      R++   ++
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M       +V SY +LI  +C++  ++ A  +   +L    +    T N        
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV---LLKTEEELGTATLN-------- 260

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              V+ A +L   M   G+     +Y   IDGLCK   + +A  L   +  +    D  +
Sbjct: 261 ---VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           YS LIDGL K      A  L H +       D + Y+  I  +  +G M+KA  LF  M 
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             GV P   A+ +L+ G  R     K  ELL  + +RN
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRN 415


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 206/367 (56%), Gaps = 11/367 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK--- 72
           +PNV T++ +IN LC+TG    A ++ E+M      +G  C P+ V Y T+IDG CK   
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDM----KVYG--CSPNVVSYNTLIDGYCKLGG 273

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G + KA  +L +M + +++P++ T+N +I GF   ++   + ++F EM+DQ V+PNV++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +++ LC  GK+ EA  + + M+  GV+PN   YN L++GFC    +  A ++F S++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G       Y++LI+ YCK  +I+   +L  EM  +GI P V TYN L  GL     +E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A KLFD++   G+  D   +   ++G C+ G   +A  L + +  +  +    +Y+ ++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G CK G LK A  +   + +   L  +V +YN+++      GK++ A+ L  +M  KG+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 372 APDCVAF 378
            P+ + +
Sbjct: 573 VPNRITY 579



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 187/357 (52%), Gaps = 11/357 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCR---TGHTIVALNLFEEMINGNGEFGVVCKP 58
           +A  +   +K +GC PNV++Y+TLI+G C+    G    A  + +EM+  +        P
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND------VSP 294

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +   +  +IDG  K+  +  + ++  +M D+++ P+V++YNS+I G C     +EA  + 
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GVQPN++T++ +++  CKN  ++EA  +   +   G  P   +YN L+D +C  
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+++    L   ME  G   +V +Y+ LI G C+N  IE A  L+ ++ SKG+ P +VT+
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-R 297
           + L  G     +  +A  L  EM + G+      Y   + G CK G +  A  +   + +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             +  +++ SY+ L+ G  + G+L+ A  L + +    L+ + +TY I+   +   G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 177/351 (50%), Gaps = 11/351 (3%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           CKP       ++  L KE      + +  +M  + I P+V T+N VI   C     N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            +  +M   G  PNVV+++ ++D  CK   NGKM +A  +L+ M++  V PN   +N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DGF     +  + ++F  M     K NV SY+ LING C   +I  A+S+  +M+S G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P ++TYN L  G  +   ++ A  +F  ++  G    T  Y   ID  CK G I +   L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +       D+ +Y+CLI GLC++G ++ A +LF  L    L  D+VT++I++   C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G+  KA  L  +M   G+ P  + +N +M G  +         +  +M++
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 14/322 (4%)

Query: 94  DVVTYNSVIRG---FCYANDSN-----EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           D V  NS+I       YAN+S      EA   F      G + + ++   +M  L K  +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEA---FKRSGYYGYKLSALSCKPLMIALLKENR 203

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             +   + + MI+  ++PN F +N +++  C TG++N+A+++   M+  GC  NV SY+ 
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263

Query: 206 LINGYCK---NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           LI+GYCK   N ++  A ++  EM+   + P + T+N L  G ++   +  + K+F EM 
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
              V  +  +Y + I+GLC  G I EA+ +   +     + ++ +Y+ LI+G CK+  LK
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A ++F S+     +     YN++I A C  GK+D    L  +ME +G+ PD   +N L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 383 LGCIRNNETSKVVELLHRMDER 404
            G  RN       +L  ++  +
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSK 465



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 147/274 (53%), Gaps = 8/274 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PNVI+Y++LINGLC  G    A+++ ++M++     GV  +P+ + Y  +I+G CK   
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDM 381

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + +A ++   +K +   P    YN +I  +C     ++   L  EM  +G+ P+V T++ 
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+NG +E A +L + +   G+ P+   ++ LM+G+C  G   +A  L   M  MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            K    +Y+I++ GYCK   ++ A ++ ++M   + ++  V +YN L  G  +  ++E A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             L +EM   G+  +   Y    + +   G++ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 33/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  L   +   G +P V TY+ +INGLC+TG  + A  + +EM+               
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 47  -----NGN-----------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                N N              GVV  PD V ++ +I  L K G +D+A +    MK+  
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD V Y  +I GFC     +EA ++  EM++QG   +VVT++ I++ LCK   + EA 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L   M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  E+E    L+++M+S+ I P  ++Y  L  G   +  V  AF+L+DEM   G  A  
Sbjct: 649 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 708

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
               T + G C+ G  V+A E    + +     D  +Y+ LI+G  K   +  A+ L + 
Sbjct: 709 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 768

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L+ DV+TYN++++     G+M +A  + L M  +GV PD   + +L+ G +  N 
Sbjct: 769 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 828

Query: 391 TSKVVELLHRMDER 404
             +   +   M +R
Sbjct: 829 LKEAFRVHDEMLQR 842



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G + NV T + +IN LC+        +   +M     E GV   PD V 
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM----EEKGVF--PDVVT 395

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+  C++G +++A EL+  M  K + P V TYN++I G C       AK +  EM+
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 455

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T+++++ E C+N  M +A ++ + M   GV P+   ++ L+      G ++
Sbjct: 456 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 515

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G    VVTYNT+ 
Sbjct: 516 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +A+ LF  +     +
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LIDG CK   ++   EL++ +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +M  KG     +  NT++ G  R     K  E L  M
Sbjct: 696 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 734



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 189/341 (55%), Gaps = 2/341 (0%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ GL K G+VD A E+  ++    +  +V T N +I   C        K    +M ++
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P+VVT++ +++  C+ G +EEA +L++ M   G++P  F YN +++G C TG+  RA
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 447

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M  +G   +  +Y+IL+   C+N  +  A  ++ EM S+G+ P +V+++ L IG
Sbjct: 448 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL-IG 506

Query: 245 LFEIHQ-VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L   +  +++A K F +M+  G+A D   Y   I G C+NG + EAL++   +    C L
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ +++GLCK   L  A ELF  +    +  D  T+  +I+    DG M+KA  LF
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M  + + PD V +NTL+ G  + +E  KV EL + M  R
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 667



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 177/350 (50%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C  + +++  ++    +   + +  E    +K K +   +   NS++ G       + A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV T +++++ LCKN K+E     L  M + GV P+   YNTL++ +
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ P  
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +AL+ FR 
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y+ LI G C++G +  A ++   +       DVVTYN +++ LC +  
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +A +LF +M  +GV PD   F TL+ G  ++   +K V L   M +RN
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 149/268 (55%), Gaps = 6/268 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LFT++   G  P+  T++TLING  + G+   A+ LFE MI  N       KPD V
Sbjct: 586 EADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN------LKPDVV 639

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK   ++K  EL   M  + I P+ ++Y  +I G+C     +EA RL+ EM
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  ++T + I+   C+ G   +A + L  M+  G+ P+   YNTL++GF     +
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ P   TY +L
Sbjct: 760 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPD 847


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 217/387 (56%), Gaps = 14/387 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLIN--GLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           EA  L  K+K F C P+  +Y+T+++   LCR+G T  +++   E++    E G+V  P 
Sbjct: 210 EAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELL----ESGLV--PH 263

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y TII G C+EG V+KA +   +M +K+  PD+ T N ++RG C     + A +LF 
Sbjct: 264 QITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFN 323

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC-LT 178
             + +G   + VT++ I+  LCK G+ EEA  LL  M +  + P+ + YN ++       
Sbjct: 324 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAE 383

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+V +A +    M     K ++F+ +IL+ G C    ++ AL L++  +SKG     VTY
Sbjct: 384 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 443

Query: 239 NTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           NT+  GL +  + E AF L  EM +++G+  D   Y T I G C+ G + +A + FR   
Sbjct: 444 NTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQ-FRNKM 502

Query: 298 ILKC-ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGK 355
           + K  + D+ + + L+ GLC+ G L  A +LF++ + +G  I D VTYN +I  LC +G+
Sbjct: 503 VEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAI-DAVTYNTIISGLCKEGR 561

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            ++A DL  +M+ K + PDC  +N ++
Sbjct: 562 FEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 206/422 (48%), Gaps = 20/422 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGH------------TIVALNLFEEMINGNG 50
           AA +F ++K    +PN++T +TLIN L R                ++   +  ++    G
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 51  EFGVV----CKPDAVIYTTIID--GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
             G +    C PD   Y TI+D   LC+ G  D++ + L ++ +  + P  +TYN++I G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           +C      +A +   +M+++  +P++ T ++++  LC  G ++ A +L    I  G   +
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK-EIEGALSLY 223
           A  YNT++ G C  GR   A +L   ME      + ++Y+ ++      + ++E A    
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           ++M+ K  KP + T N L  GL     ++ A KLF+     G A D   Y T I GLCK 
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 453

Query: 284 GYIVEALELFRTLRILKCEL-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
           G   EA +L   +      + D  +Y+ +I G C+ G+++ A++  + +       D+ T
Sbjct: 454 GRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFT 513

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            NI++  LC +G + KA  LF    +KG A D V +NT++ G  +     +  +LL  M 
Sbjct: 514 CNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMK 573

Query: 403 ER 404
           E+
Sbjct: 574 EK 575



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 8/309 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P++ T + L+ GLC  G    AL LF   I+           DAV Y TII GLCKEG 
Sbjct: 296 KPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI------DAVTYNTIISGLCKEGR 349

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI-EMMDQGVQPNVVTFS 134
            ++A +LL +M++K + PD  TYN+++     A    E    F  +M+++  +P++ T +
Sbjct: 350 FEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCN 409

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++  LC  G ++ A +L    I  G   +A  YNT++ G C  GR   A +L   ME  
Sbjct: 410 ILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 469

Query: 195 -GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  +Y+ +I GYC+  ++E A    ++M+ K  KP + T N L  GL     + +
Sbjct: 470 NGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVK 529

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KLF+     G A D   Y T I GLCK G   EA +L   ++  K   D  +Y+ ++ 
Sbjct: 530 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILC 589

Query: 314 GLCKSGRLK 322
            L  +GR++
Sbjct: 590 ALADAGRME 598



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 181/354 (51%), Gaps = 28/354 (7%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRG----------------------FCYANDSNEAKR 116
           A ++  +MK  ++ P+++T N++I                        F   N  +EA  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 117 LFIEMMDQGVQPNVVTFSVIMD--ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           L  +M D    P+  +++ I+D   LC++GK +++   L  +++ G+ P+   YNT++ G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  G+V +A +    M     K ++F+ +IL+ G C    ++ AL L++  +SKG    
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYNT+  GL +  + E AF L  EM+   +  D + Y   +  L      VE    FR
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 295 TLRILKC-ELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCA 352
              + K  + D+ + + L+ GLC  G L  A +LF++ + +G  I D VTYN +I  LC 
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI-DAVTYNTIISGLCK 452

Query: 353 DGKMDKAHDLFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +G+ ++A DL  +ME K G+ PD   +NT++LG  R  +  K  +  ++M E++
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKS 506



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 5/179 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF    + G   + +TY+T+I+GLC+ G    A +L  EM   NG       PD   
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV-----PDQTT 478

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G C+EG V+KA +   +M +K+  PD+ T N ++RG C      +A +LF   +
Sbjct: 479 YNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWI 538

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G   + VT++ I+  LCK G+ EEA  LL  M +  + P+ + YN ++      GR+
Sbjct: 539 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 24/222 (10%)

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI------------------ 248
           I  Y        A  +++ M    +KP ++T NTL   L                     
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201

Query: 249 ----HQVERAFKLFDEMQRHGVAADTWAYRTFID--GLCKNGYIVEALELFRTLRILKCE 302
               +++  A  L  +M+      D  +Y T +D   LC++G   ++++    L      
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
               +Y+ +I G C+ G+++ A++  + +       D+ T NI++  LC +G +D A  L
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F    +KG A D V +NT++ G  +     +  +LL  M+E+
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 363


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 197/383 (51%), Gaps = 8/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++K  G E +++ Y++LI G C  G       LF+E++           P A+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS------PCAI 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CK G + +A E+   M ++ + P+V TY  +I G C    + EA +    M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++  +PN VT+++I+++LCK+G + +A +++ELM +   RP+   YN L+ G C  G +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 182 NRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + A +L   M  +S     +V SY+ LI+G CK   +  AL +Y  ++ K      VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     +   V +A +L+ ++    +  ++  Y   IDG CK G +  A  L   +R+ 
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +  +  Y+CL+  LCK G L  AW LF  + R     DVV++NIMI      G +  A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
             L + M   G++PD   ++ L+
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLI 606



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 210/437 (48%), Gaps = 43/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  +++     P+V +Y+T+I G C       AL L  EM  G+G     C    V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID  CK G +D+A   L +MK   +  D+V Y S+IRGFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +T++ ++   CK G+++EAS++ E MI+ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +    M     + N  +Y+I+IN  CK+  +  A+ +   M  +  +P  +TYN L
Sbjct: 334 KEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
             GL     ++ A KL   M +       D  +Y   I GLCK                 
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 284 -------------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                              G + +A+EL++ +   K   +  +Y+ +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +    L   V  YN ++ +LC +G +D+A  LF +M+     PD V+FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 385 CIRNNETSKVVELLHRM 401
            ++  +      LL  M
Sbjct: 574 SLKAGDIKSAESLLVGM 590



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 185/343 (53%), Gaps = 2/343 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++ GLC+     KA  LL +M+  ++ PDV +YN+VIRGFC   +  +A  L  EM 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   ++VT+ +++D  CK GKM+EA   L+ M  +G+  +  VY +L+ GFC  G ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           R K LF  +   G      +Y+ LI G+CK  +++ A  ++  M+ +G++P V TY  L 
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL  + + + A +  + M       +   Y   I+ LCK+G + +A+E+   ++  +  
Sbjct: 325 DGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHALCADGKMDKAH 360
            D  +Y+ L+ GLC  G L  A +L + + +       DV++YN +IH LC + ++ +A 
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D++  +  K  A D V  N L+   ++  + +K +EL  ++ +
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 197/406 (48%), Gaps = 43/406 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F  +   G  PNV TY+ LI+GLC  G T  AL     MI  + E      P+AV
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEE------PNAV 353

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+ LCK+G V  A E++  MK +   PD +TYN ++ G C   D +EA +L   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 122 MDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +       P+V++++ ++  LCK  ++ +A  + +L+++     +    N L++     G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            VN+A EL+  +       N  +Y+ +I+G+CK   +  A  L  +M    ++P+V  YN
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L +   +++A++LF+EMQR     D  ++   IDG  K G               
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG--------------- 578

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               DI+S   L+ G+ ++G                L  D+ TY+ +I+     G +D+A
Sbjct: 579 ----DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEA 618

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              F  M   G  PD    ++++  CI   ET K+ EL+ ++ +++
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 191/391 (48%), Gaps = 22/391 (5%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC-------KEGF 75
           S L+  L R+ +  +A + + +M+          + D  I    + GL        K GF
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKML----------ETDTFINFVSLSGLLECYVQMRKTGF 125

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
                 L+L+   +    +V  +N +++G C   +  +A  L  EM    + P+V +++ 
Sbjct: 126 AFGVLALMLK---RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNT 182

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C+  ++E+A +L   M   G   +   +  L+D FC  G+++ A      M+ MG
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + ++  Y+ LI G+C   E++   +L+ E+L +G  P  +TYNTL  G  ++ Q++ A 
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++F+ M   GV  + + Y   IDGLC  G   EAL+    +     E +  +Y+ +I+ L
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKL 362

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM--EAKGVAP 373
           CK G +  A E+   + +     D +TYNI++  LCA G +D+A  L   M  ++    P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D +++N L+ G  + N   + +++   + E+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEK 453



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 4/318 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +K     P+ ITY+ L+ GLC  G    A  L   M+  +        PD +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVI 425

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLCKE  + +A ++   + +K    D VT N ++     A D N+A  L+ ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D  +  N  T++ ++D  CK G +  A  LL  M    ++P+ F YN L+   C  G +
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF  M+      +V S++I+I+G  K  +I+ A SL   M   G+ P + TY+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++  ++ A   FD+M   G   D     + +      G   +  EL + L     
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665

Query: 302 ELDIRSYSCLIDGLCKSG 319
            LD      ++D +C S 
Sbjct: 666 VLDKELTCTVMDYMCNSS 683



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 7/308 (2%)

Query: 102 IRGFCYANDSNEAKRLFIEMMDQGVQPN---VVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           +R  C   DSN   +  + +  Q V          S +M +L ++   E A      M++
Sbjct: 43  LRSLC--EDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLE 100

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                N    + L++ +    +   A  +   M   G   NV++++IL+ G C+N E   
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL  EM    + P V +YNT+  G  E  ++E+A +L +EM+  G +     +   ID
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
             CK G + EA+   + ++ +  E D+  Y+ LI G C  G L     LF   L RG   
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
              +TYN +I   C  G++ +A ++F  M  +GV P+   +  L+ G     +T + ++ 
Sbjct: 281 C-AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQP 339

Query: 398 LHRMDERN 405
           L+ M E++
Sbjct: 340 LNLMIEKD 347



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +   G  P++ TYS LIN   + G+   A++ F++M++   E      PDA I
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE------PDAHI 636

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-AKRLF 118
             +++     +G  DK  EL+ ++ DK+I  D     +V+   C ++ + + AKRL 
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 206/392 (52%), Gaps = 8/392 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C  +V+ Y+T+INGL R G    A +LF+ M++          PD V Y++II  L K  
Sbjct: 204 CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRG------PSPDVVTYSSIISALSKTQ 257

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA ++  +M    + PD + Y S++ G+C +    EA  +F +M   GV+P+VVT++
Sbjct: 258 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 317

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +MD LCKNGK  EA ++ + +++ G +P++  Y TL+ G+   G +    +L   M   
Sbjct: 318 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 377

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G +     +++++  Y K+ +++ AL ++S M  +G+ P +V Y T+   L    +V+ A
Sbjct: 378 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 437

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-FRTLRILKCELDIRSYSCLID 313
              F+ ++  G+A +   + T I GLC      +  EL F  +    C LD   ++ ++ 
Sbjct: 438 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC-LDTIFFNAIMG 496

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK GR+  A  LF  + R  +  +  TYN +I   C DGKMD+A  L   M   GV P
Sbjct: 497 NLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP 556

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             V +NT++ G  +N      + LL  MD + 
Sbjct: 557 SDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 588



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 29/289 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV- 55
           EA  +F  L   G +P+  TY TL++G    G     H ++ L + + M  G+  F ++ 
Sbjct: 331 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIM 390

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V Y T++D LC  G VD A      +K + + 
Sbjct: 391 GAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 450

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++V + ++I G C  +  ++ + L  EM+D+G+  + + F+ IM  LCK G++ EA  L
Sbjct: 451 PNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNL 510

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IG+ PN   YNTL+DG+CL G+++ A +L   M   G K +  +Y+ +INGY +
Sbjct: 511 FDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQ 570

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           N  IE  L+L  EM  KG+ P +VTY  L  GLF+  +   A +L+  M
Sbjct: 571 NGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 200/409 (48%), Gaps = 11/409 (2%)

Query: 3   AAALFTKLKAFGC---EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A +LF ++   G     PN+ TY  +I    R G   +A      +I      G+  +P+
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVIT----TGLRHEPN 135

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             + ++    LC  G      +++L+ M +    PD+ +Y  +++G C    S +A  L 
Sbjct: 136 P-LQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL 194

Query: 119 IEMMD-QGVQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
             M D +G  P +VV ++ +++ L + G++++A  L + M+  G  P+   Y++++    
Sbjct: 195 HIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALS 254

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            T  +++A ++F  M   G   +   Y+ L++GYC + + + A+ ++ +M   G++P VV
Sbjct: 255 KTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 314

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L   L +  +   A K+FD + + G   D+  Y T + G    G +VE  +L   +
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 374

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                +L    ++ ++    K  ++  A  +F ++ +  L  D+V Y  ++  LC  G++
Sbjct: 375 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 434

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D A   F  ++++G+AP+ V F TL+ G    ++  KV EL   M +R 
Sbjct: 435 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 483



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 8/123 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPD 59
           +EA  LF  +   G EPN  TY+TLI+G C  G    A+ L   M+ NG        KP 
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-------VKPS 557

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y TII+G  + G ++    LL +M  K +NP +VTY  +++G   A  +  AK L++
Sbjct: 558 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYL 617

Query: 120 EMM 122
            M+
Sbjct: 618 RMI 620


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 213/400 (53%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+V TY+ +I+G C++G    AL + + ++  NG     C PD  
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDW 355

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC  G +D+A+ELL     +   P V+T+ ++I G+C A   ++A R+   M
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +    + ++  + V+++ L K  +++EA + L  M   G+ PN   Y +++DG+C  G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMV 474

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  ME  GC  N ++Y  LI G  ++K++  A++L ++M   GI P V+TY TL
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTL 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + H+ + AF+LF+ M+++G+  D  AY    D LCK+G   EA        ++  
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLT 594

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ++   +Y+ L+DG  K+G    A  L   +      AD+ TY++++ ALC   K+++A  
Sbjct: 595 KV---TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M   GV  + VA+  ++   I+  +      L + M
Sbjct: 652 ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 195/400 (48%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +   GC  N  +Y+ LI GLC       AL L   M++        C  +  
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG------CSLNLH 285

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLCKEG +  A+ LL +M  + + P V TYN++I G+C +    +A  +   M
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+  T++ ++  LC  GK++EA +LL   I  G  P    +  L++G+C   R+
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +  +M S  CK ++ +Y +LIN   K   ++ A    +EM + G+ P VVTY ++
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSI 464

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  V  A ++F  M+  G   + W Y + I GL ++  + +A+ L   ++    
Sbjct: 465 IDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGI 524

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+ LI G CK      A+ LF  + +  L  D   YN++  ALC  G+ ++A+ 
Sbjct: 525 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS 584

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +    KGV    V + +L+ G  +   T     L+ +M
Sbjct: 585 FLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 208/455 (45%), Gaps = 60/455 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  P VITY+TLI G C+      A  LFE M+  NG       PD  
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE-MMEQNG-----LTPDEQ 564

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  + D LCK G  ++A   L++   K +    VTY S++ GF  A +++ A  L  +M
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G + ++ T+SV++  LCK  K+ EA  +L+ M   GV+ N   Y  ++      G+ 
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK LF  M S G K +  +Y++ I+ YCK   IE A  L  EM   G+ P VVTYN  
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIF 741

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK----NGYIVEALELFRTL- 296
             G   +  ++RAF     M       + W Y   +    K    N + V+   ++  + 
Sbjct: 742 INGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIE 801

Query: 297 ---------RILKCELD--IRSYSCLIDGLCKSGRLKIAWELF-HSLPRGV--------- 335
                    R++K  L+  + +YS +I G CK+ RL+ A  L  H L + +         
Sbjct: 802 LNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 861

Query: 336 ----------------LIADVV---------TYNIMIHALCADGKMDKAHDLFLDMEAKG 370
                            + D++         +Y+ +I  LC +G  D+A  LF D+    
Sbjct: 862 LIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMD 921

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              + VA+  L  G ++        +LL  MD R+
Sbjct: 922 YNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 189/398 (47%), Gaps = 7/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L++ L   G  P+ +TY+T+I   C+ G   +A   F  +     +       D      
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQM------DTYTCNA 219

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G C+   + KA  LL+ M       +  +Y  +I+G C A    EA  L   M+  G
Sbjct: 220 LLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG 279

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              N+ T+++++  LCK G++ +A  LL+ M   GV P+ + YN ++DG+C +GR+  A 
Sbjct: 280 CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 339

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   ME  GC  + ++Y+ LI G C  K ++ A  L +  +++G  PTV+T+  L  G 
Sbjct: 340 GIKALMEQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGY 398

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +++ A ++   M       D  AY   I+ L K   + EA E    +       ++
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +IDG CK G +  A E+F  +       +  TY  +I+ L  D K+ KA  L   
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M+  G+ P  + + TL+ G  + +E      L   M++
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 556



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 171/375 (45%), Gaps = 34/375 (9%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   +  L +    +   +L   +  + + PD VTYN++I  +C       A R F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+Q +  T + ++   C+   + +A  LL +M  +G R N + Y  L+ G C    V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   GC  N+ +Y++LI G CK   I  A  L  EM  +G+ P+V TYN + 
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------------------- 282
            G  +  +++ A  +   M+++G   D W Y + I GLC                     
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTP 386

Query: 283 ---------NGY-----IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
                    NGY     I +AL +   +    C+LD+++Y  LI+ L K  RLK A E  
Sbjct: 387 TVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL 446

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           + +    L  +VVTY  +I   C  G +  A ++F  ME +G  P+   + +L+ G I++
Sbjct: 447 NEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 389 NETSKVVELLHRMDE 403
            +  K + L+ +M E
Sbjct: 507 KKLHKAMALITKMQE 521



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 152/364 (41%), Gaps = 22/364 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA L  K+   GC+ ++ TYS L+  LC+      AL++ ++M       GV C  + V 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS----GVKC--NIVA 667

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT II  + KEG  D AK L  +M      P   TY   I  +C      EA+ L  EM 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEME 727

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P+VVT+++ ++     G ++ A   L+ M+     PN + Y  L+  F     +N
Sbjct: 728 RDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787

Query: 183 R----------------AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                              +L   M   G    V +YS +I G+CK   +E A  L   M
Sbjct: 788 AHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L K I P    Y  L     +I    +A     +M   G      +Y   I GLC  G  
Sbjct: 848 LGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDY 907

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A  LF  L  +    +  ++  L DGL K+G +    +L  ++       D  +Y+++
Sbjct: 908 DRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967

Query: 347 IHAL 350
             ++
Sbjct: 968 TDSI 971



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 22/295 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +LF ++ + G +P+  TY+  I+  C+ G    A +L  EM       GV   PD V
Sbjct: 683 HAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERD----GVT--PDVV 736

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--------YANDS-- 111
            Y   I+G    G++D+A   L +M D +  P+  TY  +++ F         Y + S  
Sbjct: 737 TYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGM 796

Query: 112 ------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                 N   +L   MM  G+ P VVT+S I+   CK  ++EEA  LL+ M+   + PN 
Sbjct: 797 WNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNE 856

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            +Y  L+   C      +A      M   G +  + SY  LI G C   + + A SL+ +
Sbjct: 857 EIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCD 916

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L        V +  L  GL +   V+   +L   M       D+ +Y    D +
Sbjct: 917 LLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 38/242 (15%)

Query: 181 VNRAKELFVSMESMGCKHNVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           V  A +   ++  +G K  V S   Y++ +    +    E    LYS ++ +G+ P  VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT--------------------------- 270
           YNT+ +   +   +  A + F  ++  G+  DT                           
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241

Query: 271 --------WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
                   ++Y   I GLC+   + EAL L   +    C L++ +Y+ LI GLCK GR+ 
Sbjct: 242 LMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIH 301

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  L   +P   ++  V TYN MI   C  G+M  A  +   ME  G  PD   +N+L+
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 383 LG 384
            G
Sbjct: 362 YG 363


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 206/392 (52%), Gaps = 8/392 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C  +V+ Y+T+INGL R G    A +LF+ M++          PD V Y++II  L K  
Sbjct: 203 CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS------PDVVTYSSIISALSKTQ 256

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA ++  +M    + PD + Y S++ G+C +    EA  +F +M   GV+P+VVT++
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +MD LCKNGK  EA ++ + +++ G +P++  Y TL+ G+   G +    +L   M   
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G +     +++++  Y K+ +++ AL ++S M  +G+ P +V Y T+   L    +V+ A
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-FRTLRILKCELDIRSYSCLID 313
              F+ ++  G+A +   + T I GLC      +  EL F  +    C LD   ++ ++ 
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC-LDTIFFNAIMG 495

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK GR+  A  LF  + R  +  +  TYN +I   C DGKMD+A  L   M   GV P
Sbjct: 496 NLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP 555

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             V +NT++ G  +N      + LL  MD + 
Sbjct: 556 SDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 587



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 29/289 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV- 55
           EA  +F  L   G +P+  TY TL++G    G     H ++ L + + M  G+  F ++ 
Sbjct: 330 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIM 389

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V Y T++D LC  G VD A      +K + + 
Sbjct: 390 GAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 449

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++V + ++I G C  +  ++ + L  EM+D+G+  + + F+ IM  LCK G++ EA  L
Sbjct: 450 PNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNL 509

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IG+ PN   YNTL+DG+CL G+++ A +L   M   G K +  +Y+ +INGY +
Sbjct: 510 FDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQ 569

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           N  IE  L+L  EM  KG+ P +VTY  L  GLF+  +   A +L+  M
Sbjct: 570 NGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 202/409 (49%), Gaps = 12/409 (2%)

Query: 3   AAALFTKLKAFGC---EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           A +LF ++   G     PN+ TY  +I    R G   +A      +I      G+   P 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVIT----TGLRMSP- 134

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            ++++ ++ GLC       A +++L+ M +    PD+ +Y  +++G C    S +A  L 
Sbjct: 135 -ILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL 193

Query: 119 IEMMD-QGVQP-NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
             M D +G  P +VV ++ +++ L + G++++A  L + M+  G  P+   Y++++    
Sbjct: 194 HIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALS 253

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
            T  +++A ++F  M   G   +   Y+ L++GYC + + + A+ ++ +M   G++P VV
Sbjct: 254 KTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 313

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L   L +  +   A K+FD + + G   D+  Y T + G    G +VE  +L   +
Sbjct: 314 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 373

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                +L    ++ ++    K  ++  A  +F ++ +  L  D+V Y  ++  LC  G++
Sbjct: 374 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 433

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D A   F  ++++G+AP+ V F TL+ G    ++  KV EL   M +R 
Sbjct: 434 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRG 482



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 8/123 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPD 59
           +EA  LF  +   G EPN  TY+TLI+G C  G    A+ L   M+ NG        KP 
Sbjct: 504 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-------VKPS 556

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y TII+G  + G ++    LL +M  K +NP +VTY  +++G   A  +  AK L++
Sbjct: 557 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYL 616

Query: 120 EMM 122
            M+
Sbjct: 617 RMI 619


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 214/400 (53%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+V TY+ +I+G C++G    AL + + ++ GNG     C PD  
Sbjct: 306 DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI-KTLMEGNG-----CNPDDW 359

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC  G  D+A+ELL     +  +P V+T+ ++I G+C A   ++A R+   M
Sbjct: 360 TYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIM 418

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +    + ++  + V++  L K  +++EA   L  +   G+ PN  +Y +++D +C  G+V
Sbjct: 419 ISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKV 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F   E  GC+ N ++YS LI G  +++++  A++L ++M   GI P V+TY TL
Sbjct: 479 GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + H+ + AF+LF+ M+++G+  D  AY    D LCK+G   EA        ++  
Sbjct: 539 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVV-- 596

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L   +Y+ L+DG  K+G  + A  L   +      AD  TY++++ ALC   K+++A  
Sbjct: 597 -LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALS 655

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M  +GV  + VA+  ++   I+  +      + + M
Sbjct: 656 ILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM 695



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 62/436 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++ A G  PNV+ Y+++I+  C+ G    AL +F+ +    G     C+P+A 
Sbjct: 445 EAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK-LTEHEG-----CRPNAW 498

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GL ++  + KA  L+ +M++  I P V+TY ++I+G C  ++ + A RLF EM
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EM 557

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+Q G+ P+   ++V+ D LCK+G+ EEA   L   ++ GV      Y +L+DGF   G 
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGN 614

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS------------------- 221
              A  L   M + GCK +  +YS+L+   CK K++  ALS                   
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674

Query: 222 ----------------LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                           +++EM+S G KP+ +TY        +I ++E A  L  EM+R+G
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK-------- 317
           VA D   Y  FI+G    GY+  A    + +    CE +  +Y  L+    K        
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHY 794

Query: 318 ---SG-----RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
              SG     +L   W+L   + +  L    VTY+ +I   C   ++++A  L   M  K
Sbjct: 795 VDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854

Query: 370 GVAPDCVAFNTLMLGC 385
            ++P+   +  L+  C
Sbjct: 855 DISPNEEIYTMLIKCC 870



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 196/405 (48%), Gaps = 30/405 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV---------- 55
           L+++L   G  P+ +TY+T+I   C+ G   +A   F  +     E              
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 56  -------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
                              C+ +   YT +I GLC+   V +A  LLL M     +P++ 
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           TY  +IRG C     ++A+ L  EM  +GV P+V T++ ++D  CK+G++++A  +  LM
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G  P+ + YN+L+ G C  G+ + A+EL     + G    V +++ +INGYCK ++I
Sbjct: 350 EGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKI 408

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL + S M+S   K  +  Y  L   L + H+++ A    +E+  +G++ +   Y + 
Sbjct: 409 DDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSI 468

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ID  CK G +  ALE+F+      C  +  +YS LI GL +  +L  A  L   +    +
Sbjct: 469 IDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGI 528

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
              V+TY  +I   C   + D A  LF  ME  G+ PD  A+N L
Sbjct: 529 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 573



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 178/346 (51%), Gaps = 1/346 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V Y T+I   CKEG +  A      +++  +  D  T N+++ G+C   D  +A  L
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWL 240

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + M   G + N  ++++++  LC+   + EA  LL +M+Q G  PN   Y  L+ G C 
Sbjct: 241 LMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK 300

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR++ A+ L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  P   T
Sbjct: 301 EGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT 360

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN+L  GL    + + A +L +     G +     +   I+G CK   I +AL +   + 
Sbjct: 361 YNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             KC+LD+++Y  LI  L K  RLK A +  + +    L  +VV Y  +I A C  GK+ 
Sbjct: 420 SSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVG 479

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A ++F   E +G  P+   +++L+ G I++ +  K + L+ +M E
Sbjct: 480 AALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 145/284 (51%), Gaps = 12/284 (4%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN  +R     + +    +L+ +++ +G+ P+ VT++ ++   CK G +  A +   L+ 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G+  + +  N L+ G+C TG + +A  L + M  MGC+ N +SY+ILI G C+ + + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L   ML  G  P + TY  L  GL +  ++  A  L DEM R GV    W Y   I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVL 336
           DG CK+G + +AL +   +    C  D  +Y+ LI GLC  G+   A EL + ++ RG  
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARG-F 388

Query: 337 IADVVTYNIMIHALCADGKMDKA---------HDLFLDMEAKGV 371
              V+T+  +I+  C   K+D A             LD++A GV
Sbjct: 389 SPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGV 432



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 32/365 (8%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ++  ++   G + N++ Y+ +I+ + + G    A ++F EMI+         KP A+
Sbjct: 652  EALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH------KPSAI 705

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT  I   CK G +++A  L+ +M+   + PDVVTYN  I G  +    + A      M
Sbjct: 706  TYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRM 765

Query: 122  MDQGVQPNVVTFSVIMDELCKNG----------------KMEEASQLLELMIQIGVRPNA 165
            +D   +PN  T+ +++    K                  K++   QLLE M++ G+ P A
Sbjct: 766  IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA 825

Query: 166  FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
              Y++++ GFC   R+  A  L   M       N   Y++LI   C  K  E A S  + 
Sbjct: 826  VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885

Query: 226  MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            M+  G +P + +Y+ L  GL +    ++A  LF ++       +  A++   DGL K G+
Sbjct: 886  MIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGH 945

Query: 286  IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            +    +L   +    C +D  +YS + + + ++  +  ++          + A +V  N 
Sbjct: 946  VDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY----------MCAPLVGQNR 995

Query: 346  MIHAL 350
            M HAL
Sbjct: 996  MQHAL 1000



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%)

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN     L      E   KL+ ++ + G+  DT  Y T I   CK G +  A   FR LR
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E+D  + + L+ G C++G L+ A  L   +P      +  +Y I+I  LC    + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  L L M   G +P+   +  L+ G  +         LL  M  R
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRR 317



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 52/115 (45%)

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
           V+A++  R     +  L  + Y+  +  L +    +   +L+  L +  L+ D VTYN M
Sbjct: 130 VDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTM 189

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I A C +G +  AH  F  +   G+  D    N L+LG  R  +  K   LL  M
Sbjct: 190 IMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMM 244


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++      PN ITY+T+I+G  + G       L+ +M+          KP+ +
Sbjct: 206 DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHG------LKPNVI 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+ G + +   +L +M  + + PD  TY+ +  G     DS     LF E 
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+    T S++++ LCK+GK+ +A ++L+ ++  G+     +YNTL++G+C  G +
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M+S   + +  +Y+ LING  K + I  A  L  EM   G+ P+V T+NTL
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   Q+E+ F +  +MQ  G+  +  +Y + ++  CKNG I+EA+ +   + I   
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
               + Y+ +ID   + G    A+ L   +    +   +VTYN++I  LC   ++ +A +
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   +   G+APD +++NTL+  C   + T + +EL   M
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEM 599



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 201/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E AA+  ++ +    P+  TYS L +G  RTG +   L+LFEE +    + G      A 
Sbjct: 276 ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG------AY 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G + KA+E+L  + +  +    V YN++I G+C   D   A  +F +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +T++ +++ L K  ++ EA  L+  M + GV P+   +NTL+D +   G++
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P    YN +
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E    ++AF L ++M+  GV      Y   I GLCK   I EA EL  +LR    
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ LI   C       A EL   + +  +     TY ++  +L   G++ +  +
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+  M  K V P    +N ++    +  E SKV  L   M ++
Sbjct: 630 LYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 176/346 (50%), Gaps = 1/346 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAK 115
           +PD   +   +      G +D+A  +L +M  D    P+  +YN VI G   A    +A 
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +LF EM ++ V PN +T++ ++D   K G +E   +L   M++ G++PN   YN L+ G 
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  GR+     +   M S     + F+YSIL +G+ +  + +  LSL+ E + KG+K   
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T + L  GL +  ++ +A ++   +   G+   T  Y T I+G C+ G +  A  +F+ 
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D  +Y+ LI+GL K  R+  A +L   + +  +   V T+N +I A    G+
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++K   +  DM+ KG+ P+ V++ +++    +N +  + V +L  M
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 4/330 (1%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-MDQGVQPNVVTFS 134
           V  A ELL+  + +   PD  T+N  ++    A D +EA  +   M  D    PN  +++
Sbjct: 136 VRGAFELLVAARAR---PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYN 192

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           V++  L K G   +A +L + M +  V PN   YNT++DG    G +     L+  M   
Sbjct: 193 VVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRH 252

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G K NV +Y++L++G C+   +    ++  EM S+ + P   TY+ LF G       +  
Sbjct: 253 GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTM 312

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             LF+E  + GV    +     ++GLCK+G I +A E+ +TL           Y+ LI+G
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            C+ G L+ A+ +F  +   ++  D +TYN +I+ L    ++ +AHDL ++ME  GV P 
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              FNTL+    R  +  K   +L  M E+
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEK 462



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 9/266 (3%)

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC----KHN 199
           G+  +     EL++    RP+ F +N  +    + G ++ A  +   +  MGC      N
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGM---LRRMGCDGAPAPN 187

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            FSY+++I G  K      A+ L+ EM  K + P  +TYNT+  G  +   +E  F+L+ 
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M RHG+  +   Y   + GLC+ G + E   +   +   K   D  +YS L DG  ++G
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 320 RLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             +    LF  S+ +GV I    T +I+++ LC DGK+ KA ++   +   G+    V +
Sbjct: 308 DSQTMLSLFEESVKKGVKIG-AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           NTL+ G  +  +      +  +M  R
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSR 392



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 6/274 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  P+V T++TLI+   R G       +  +M     E G+  KP+ V
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDM----QEKGL--KPNVV 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +I++  CK G + +A  +L  M  K++ P    YN++I  +     +++A  L  +M
Sbjct: 470 SYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P++VT+++++  LCK  ++ EA +LL+ +   G+ P+   YNTL+   C     
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA EL   M   G K +  +Y +L +       +    +LY +ML K + P    YN +
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                +  +  +   L  EM   G+A   +   T
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 214/434 (49%), Gaps = 42/434 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K+   G +  V  Y++LING C+ G+   A++ F+EMI+         KP  V 
Sbjct: 420 AIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG------LKPTVVS 473

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT++I G C +G + +A  L  +M  K I P+  T+ ++I     AN   +A RLF EM+
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +Q + PN VT++V+++  CK G   +A +LL  M+Q G+ P+ + Y  L+   C TGRV 
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----------- 231
            AK+    +     K N   YS L++GYCK   +  AL +  EM+ +G+           
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 232 ------------------------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                   +P  V Y ++  G  +   V++AF ++D M   G  
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y T I+ LCK G + +A  L++ + +     +  +Y C +D L + G ++ A +L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            + + +G L+A+ V+YNI++   C  G++++A  L  +M    + PDC+ ++T++  C R
Sbjct: 774 HNDMLKG-LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 388 NNETSKVVELLHRM 401
                  +E    M
Sbjct: 833 RGNLDGAIEFWDTM 846



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 198/418 (47%), Gaps = 41/418 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L   G   + +TY TL+ GLC+     V   + +EMI    E G V  P   
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI----ELGFV--PTEA 332

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +++++GL ++G V  A +L+ ++K     P +  YN++I   C     +EA+ LF EM
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM 392

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+  N VT+S+++D  C+ GK++ A   L  MI  G++   + YN+L++G C  G +
Sbjct: 393 GEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNL 452

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F  M   G K  V SY+ LI+GYC   ++  A  LY EM  KGI P   T+ TL
Sbjct: 453 SAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTL 512

Query: 242 FIGLFEIHQVERAFKLFDEMQ-----------------------------------RHGV 266
              LF  +++  AF+LFDEM                                    + G+
Sbjct: 513 ISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL 572

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             DT+ YR  I  LC  G + EA +    L     +L+   YS L+ G CK GRL+ A  
Sbjct: 573 VPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALG 632

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +   + +  +  D+V Y ++I     +        L  +M  + + PD V + +++ G
Sbjct: 633 VCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDG 690



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 184/382 (48%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  ++K  G  P++  Y+ LIN LC+ G    A  LF+EM    GE G+ C  D 
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM----GEKGL-CAND- 401

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +ID  C+ G +D A   L +M    I   V  YNS+I G C   + + A   F E
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G++P VV+++ ++   C  GK+ EA +L   M   G+ PN + + TL+       R
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  LF  M       N  +Y+++I G+CK      A  L ++M+ KG+ P   TY  
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L    +V  A K  D++ R     +   Y   + G CK G + +AL + R +    
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            ++D+  Y+ LIDG  K       + L  ++    L  D V Y  MI      G + KA 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            ++  M  +G  P+ V + TL+
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLI 723



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 195/426 (45%), Gaps = 42/426 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G  PN  T++TLI+ L R      A  LF+EM+  N        P+ V
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN------MMPNEV 542

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G CKEG   KA ELL QM  K + PD  TY  +I   C      EAK+   ++
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV-------------------- 161
             +  + N + +S ++   CK G++ +A  +   M++ GV                    
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662

Query: 162 ---------------RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                          RP+  +Y +++DG+   G V +A  ++  M   GC  N+ +Y+ L
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTL 722

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK   ++ A  L+ EML     P  VTY      L     +E+A +L ++M + G+
Sbjct: 723 INELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GL 781

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+T +Y   + G CK G + EA +L   +       D  +YS +I   C+ G L  A E
Sbjct: 782 LANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIE 841

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            + ++    L  D + YN +I+  C  G++ KA +L  DM  +GV P+     +L  G  
Sbjct: 842 FWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGAS 901

Query: 387 RNNETS 392
           R    S
Sbjct: 902 RKFSIS 907



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 198/423 (46%), Gaps = 42/423 (9%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+ Y+ LI+GLC+      A+    E+ NG  + G+      V Y T++ GLCK    +
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAV----EIKNGLIQKGLTA--SEVTYCTLVLGLCKVQEFE 313

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
               ++ +M +    P     +S++ G        +A  L   +   G  P++  ++ ++
Sbjct: 314 VGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALI 373

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK+GK +EA  L + M + G+  N   Y+ L+D FC  G+++ A      M   G K
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG------------- 244
             V+ Y+ LING+CK   +  A+S + EM+ KG+KPTVV+Y +L  G             
Sbjct: 434 ITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRL 493

Query: 245 ----------------------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                                 LF  +++  AF+LFDEM    +  +   Y   I+G CK
Sbjct: 494 YHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCK 553

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
            G  V+A EL   +       D  +Y  LI  LC +GR+  A +    L R     + + 
Sbjct: 554 EGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMC 613

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM- 401
           Y+ ++H  C +G++  A  +  +M  +GV  D V +  L+ G I+  +TS V  LL  M 
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673

Query: 402 DER 404
           D+R
Sbjct: 674 DQR 676



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 197/426 (46%), Gaps = 48/426 (11%)

Query: 15  CE--PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           CE  P V T   ++NGL +     + L LF E+++     G+  +PD  IY  +I   C+
Sbjct: 187 CELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILS----MGI--RPDIYIYVAVIRSFCE 240

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL--------------- 117
                KAKE++ +M+  ++N  VV YN +I G C      EA  +               
Sbjct: 241 LKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVT 298

Query: 118 --------------------FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
                                 EM++ G  P     S +++ L + GK+ +A  L+  + 
Sbjct: 299 YCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVK 358

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G  P+ FVYN L++  C  G+ + A+ LF  M   G   N  +YSILI+ +C+  +++
Sbjct: 359 KVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLD 418

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+    +M+  GIK TV  YN+L  G  ++  +  A   FDEM   G+     +Y + I
Sbjct: 419 TAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLI 478

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C  G + EA  L+  +       +  +++ LI  L ++ R+  A+ LF  +    ++
Sbjct: 479 SGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMM 538

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKV 394
            + VTYN+MI   C +G   KA +L   M  KG+ PD   +  L   +    R  E  K 
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKF 598

Query: 395 VELLHR 400
           ++ LHR
Sbjct: 599 IDDLHR 604



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 158/348 (45%), Gaps = 2/348 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P       +++GL K   VD    L  ++    I PD+  Y +VIR FC   +  +AK +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  +    NVV ++V++  LCKN ++ EA ++   +IQ G+  +   Y TL+ G C 
Sbjct: 251 IQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                    +   M  +G      + S L+ G  +  ++  A  L + +   G  P++  
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L   L +  + + A  LF EM   G+ A+   Y   ID  C+ G +  A+     + 
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +   ++ +  Y+ LI+G CK G L  A   F  +    L   VV+Y  +I   C  GK+ 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A  L+ +M  KG+AP+   F TL+    R N  +    L   M E+N
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 149/298 (50%), Gaps = 8/298 (2%)

Query: 113 EAKRLF-----IEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
           + KR+F       +M Q  + P V T   +++ L K  +++    L   ++ +G+RP+ +
Sbjct: 170 QEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIY 229

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  ++  FC      +AKE+   MES     NV  Y++LI+G CKNK +  A+ + + +
Sbjct: 230 IYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGL 287

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + KG+  + VTY TL +GL ++ + E    + DEM   G      A  + ++GL + G +
Sbjct: 288 IQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKV 347

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
           V+A +L   ++ +     +  Y+ LI+ LCK G+   A  LF  +    L A+ VTY+I+
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSIL 407

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I + C  GK+D A      M   G+      +N+L+ G  +    S  V     M ++
Sbjct: 408 IDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 209/418 (50%), Gaps = 42/418 (10%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F K+   G    V +Y+++IN  C+ G   +A  LF+EM++         KP    YT++
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG------LKPTVATYTSL 476

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I G CK+G V KA +L  +M  K I P+ VT+ ++I G C  N   EA +LF EM++  +
Sbjct: 477 ISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
            PN VT++V+++  C+ G    A +LL+ MI+ G+ P+ + Y  L+ G C TGRV+ AKE
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL-------------------------- 220
               +     + +   Y+ L+ G+CK   I+ AL                          
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL 656

Query: 221 --------SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L  EM  KG++P  V Y  L  G  +   +++AF+ +  M   G   ++  
Sbjct: 657 NQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVT 716

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++GL K GY+ EA  LF+ + + +   +  +Y C +D L K G ++ A +L +++ 
Sbjct: 717 YTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML 776

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
           +G   A+ VTYNI+I   C  GK  +A  L   M   G+ PDC+ ++T +   C R N
Sbjct: 777 QGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 212/436 (48%), Gaps = 44/436 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   L   G + +++TY TL+ GLCR     V + + +EMI    E G V  P   
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI----ELGYV--PSEA 331

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +I+GL K G ++ A ELL ++    + P++  YNS+I   C      EA+ LF  M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN VT+++++D   +  K++ A      MI+ G+    + YN++++  C  G++
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ LF  M   G K  V +Y+ LI+GYCK+  +  A  LY EM  KGI P  VT+  L
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 242 FIGLFEIHQVE-----------------------------------RAFKLFDEMQRHGV 266
             GL +I+++                                    RAF+L DEM + G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           + DT+ YR  I GLC  G + EA E    L      LD   Y+ L+ G CK GR+K A  
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKA-HDLFLDMEAKGVAPDCVAFNTLMLGC 385
               +    L  D+V+Y ++I    A  + D+   +L  +M  KG+ PD V +  L+ G 
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLISG--ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGF 689

Query: 386 IRNNETSKVVELLHRM 401
           I++    K  E  + M
Sbjct: 690 IKSGNLKKAFEFWYIM 705



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 208/401 (51%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+   +   ++ +G  P V T S L+N L R       L LF+ ++N     GV  KPD 
Sbjct: 172 MDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA----GV--KPDC 225

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IYT ++  LC+    +KAKE++ Q +    +  +VTYN  I G C +    EA  +   
Sbjct: 226 YIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRS 285

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + ++G++ ++VT+  ++  LC+  + E   ++++ MI++G  P+    + L++G    G 
Sbjct: 286 LGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGS 345

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A EL   +  +G   N+F Y+ +IN  CK  ++E A  L+S M  +G+ P  VTY  
Sbjct: 346 IEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTI 405

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +++ AF  F++M   G++A  ++Y + I+  CK G +  A  LF+ +    
Sbjct: 406 LIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG 465

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +  + +Y+ LI G CK G +  A++L+H +    +  + VT+  +I  LC   KM +A 
Sbjct: 466 LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEAS 525

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF +M    + P+ V +N L+ G  R   T++  ELL  M
Sbjct: 526 KLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  + +  GC  +++TY+  INGLC++     A+ +   +    GE G+  K D V
Sbjct: 243 KAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL----GEKGL--KADLV 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GLC+    +   E++ +M +    P     + +I G         A  L  ++
Sbjct: 297 TYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKV 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN+  ++ +++ LCK GK+EEA  L  +M + G+ PN   Y  L+DGF    ++
Sbjct: 357 GKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKL 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F  M   G    V+SY+ +IN  CK  +++ A  L+ EM+ KG+KPTV TY +L
Sbjct: 417 DVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSL 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V +AFKL+ EM   G+A +T  +   I GLC+   + EA +LF  +  LK 
Sbjct: 477 ISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI+G C+ G    A+EL   + +  L  D  TY  +I  LC+ G++ +A +
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
              D+  K    D + +  L+ G
Sbjct: 597 FINDLHHKHQRLDELCYTALLQG 619



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 208/403 (51%), Gaps = 12/403 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---GNGEFGVVCKPDAVI 62
           LF  L   G +P+   Y+ ++  LC     +   N  +E+IN   GNG     C    V 
Sbjct: 212 LFDTLVNAGVKPDCYIYTVVVKCLCE----LKDFNKAKEIINQAEGNG-----CSLSIVT 262

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   I+GLCK   V +A E+   + +K +  D+VTY +++ G C   +      +  EM+
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  P+    S +++ L K G +E A +LL  + ++GV PN FVYN++++  C TG++ 
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLE 382

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ LF  M   G   N  +Y+ILI+G+ +  +++ A   +++M+  GI  TV +YN++ 
Sbjct: 383 EAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +  +++ A  LF EM   G+      Y + I G CK+G + +A +L+  +      
Sbjct: 443 NCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIA 502

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI GLC+  ++  A +LF  +    ++ + VTYN++I   C +G   +A +L
Sbjct: 503 PNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFEL 562

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +M  KG++PD   +  L+ G       S+  E ++ +  ++
Sbjct: 563 LDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKH 605



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 197/394 (50%), Gaps = 10/394 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF ++      PN +TY+ LI G CR G+T  A  L +EMI           PD  
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG------LSPDTY 576

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC  G V +AKE +  +  K+   D + Y ++++GFC      EA     EM
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636

Query: 122 MDQGVQPNVVTFSVIMD-ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +G+Q ++V+++V++   L +N ++    +LL  M   G++P+  +Y  L+DGF  +G 
Sbjct: 637 VGRGLQMDLVSYAVLISGALNQNDRI--LFELLREMHGKGMQPDNVIYTILIDGFIKSGN 694

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A E +  M   G   N  +Y+ L+NG  K   +  A  L+  ML     P  +TY  
Sbjct: 695 LKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGC 754

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
               L +   +E A +L + M + G  A+T  Y   I G C+ G   EA +L   +  + 
Sbjct: 755 FLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +YS  I   CK G +  A +++  + +  L  D V +N +IHA C +G++D+A 
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRAL 873

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  DM  +G+ P    +++LM+   +    ++V
Sbjct: 874 QLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 168/348 (48%), Gaps = 4/348 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+    + +++ L +     +  EL   + +  + PD   Y  V++  C   D N+AK +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +    G   ++VT++V ++ LCK+ ++ EA ++   + + G++ +   Y TL+ G C 
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                   E+   M  +G   +  + S LI G  K   IEGA  L +++   G+ P +  
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN++   L +  ++E A  LF  M   G+  +   Y   IDG  +   +  A   F   +
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN--K 425

Query: 298 ILKCELD--IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +++C +   + SY+ +I+  CK G++K+A  LF  +    L   V TY  +I   C DG 
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + KA  L+ +M  KG+AP+ V F  L+ G  + N+ ++  +L   M E
Sbjct: 486 VPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE 533



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 94/199 (47%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           + +LI  Y +NK +   + + + M   G+ P V T + L   L  I +  +  +LFD + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             GV  D + Y   +  LC+     +A E+        C L I +Y+  I+GLCKS R+ 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A E+  SL    L AD+VTY  ++  LC   + +   ++  +M   G  P   A + L+
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 383 LGCIRNNETSKVVELLHRM 401
            G I+        ELL+++
Sbjct: 338 EGLIKMGSIEGAFELLNKV 356



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N +TY+ LI G C+ G    A  L + MI      G+   PD + Y+T I   CK 
Sbjct: 778 GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMI------GIGMVPDCITYSTFIYEYCKR 831

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G VD A ++   M  + + PD V +N +I   C   + + A +L  +MM +G++P   T+
Sbjct: 832 GNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTY 891

Query: 134 SVIMDELCKNGKMEEAS 150
             +M +L +  ++ +  
Sbjct: 892 HSLMVQLAQRARLTQVQ 908



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 18/207 (8%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
           H+  S+ ILI+   +N     A SL   +L +G+ P               HQ+   F  
Sbjct: 101 HSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNP---------------HQIFENF-- 143

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F+  +++  ++ +  +   I    +N  +++ + +   +R      ++R+ S L++ L +
Sbjct: 144 FESYKKYKFSSSS-GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALAR 202

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
             + +   ELF +L    +  D   Y +++  LC     +KA ++    E  G +   V 
Sbjct: 203 IRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVT 262

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           +N  + G  ++    + VE+   + E+
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEK 289


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 209/399 (52%), Gaps = 18/399 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +LFT++K  G  P+++TY++LI+G  + G     + +FE+M + +      C PD + 
Sbjct: 75  ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD------CDPDVIT 128

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  CK   + KA E L +MK   + P+VVTY++ I  FC      EA + F++M 
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + PN  T++ ++D  CK G + EA +L+E ++Q G++ N   Y  L+DG C  GR+ 
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E+F +M + G   N  +Y+ L++G+ K KE+E A  +  EM  K IKP ++ Y T+ 
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL    ++E A  L  E++  G+  +   Y T +D   K+G   EAL L   +      
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM------ 362

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD      L+DGLCK+   ++A +LF  +    ++ D + Y  +I      G + +A +L
Sbjct: 363 LD------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M   G+  D  A+  L+ G   + +  K   LL  M
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 455



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 204/425 (48%), Gaps = 29/425 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+  F K++ F   P   + + L++ L + G   ++   F++M    G  G+  K    
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 57

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCKEG ++ A+ L  QMK+    PD+VTYNS+I G       +E   +F +M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+V+T++ +++  CK  +M +A + L  M   G++PN   Y+T +D FC  G +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A + FV M  +    N F+Y+ LI+  CK   +  AL L  E+L  GIK  VVTY  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL E  +++ A ++F  M   GVA +   Y   + G  K   +  A ++ + ++    
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA------------ 349
           + D+  Y  ++ GLC   RL+ A  L   +    +  + V Y  ++ A            
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 350 -----------LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
                      LC +   + A  LF +M  KG+ PD +A+  L+ G +++    + + L 
Sbjct: 358 LLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 417

Query: 399 HRMDE 403
            RM E
Sbjct: 418 DRMIE 422



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 167/309 (54%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +++A E  L+M+   + P   + N+++         + +++ F +M   G++ +V T+++
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D LCK G +E A  L   M + G  P+   YN+L+DG    G ++    +F  M+   
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V +Y+ LIN +CK + +  A     EM + G+KP VVTY+T      +   ++ A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           K F +M+R  +  + + Y + ID  CK G + EAL+L   +     +L++ +Y+ L+DGL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ GR+K A E+F ++    +  +  TY  ++H      +M+ A D+  +M+ K + PD 
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 376 VAFNTLMLG 384
           + + T++ G
Sbjct: 302 LLYGTILWG 310



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 152/292 (52%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA   F++M    V P   + + ++  L K G+ + + +  + M   G++ + F YN ++
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D  C  G +  A+ LF  M+  G   ++ +Y+ LI+G+ K   ++  + ++ +M      
Sbjct: 64  DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TYN L     +  ++ +AF+   EM+ +G+  +   Y TFID  CK G + EA++ 
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +R +    +  +Y+ LID  CK+G L  A +L   + +  +  +VVTY  ++  LC 
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +G+M +A ++F  M   GVAP+   +  L+ G I+  E     ++L  M E+
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 29/288 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G + NV+TY+ L++GLC  G    A  +F  M+N     GV   P+  
Sbjct: 214 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA----GVA--PNQE 267

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++ G  K   ++ AK++L +MK+K I PD++ Y +++ G C  +   EAK L  E+
Sbjct: 268 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 327

Query: 122 MDQGVQPNVVTFSVIMDE-----------------------LCKNGKMEEASQLLELMIQ 158
            + G+  N V ++ +MD                        LCKN   E A +L + M+ 
Sbjct: 328 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLD 387

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P+   Y  L+DG    G +  A  L   M  +G + ++ +Y+ LI G   + +++ 
Sbjct: 388 KGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQK 447

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           A +L  EM+ KG+ P  V Y  L    + + +V+ A +L +EM + G+
Sbjct: 448 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 33/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  L   +   G +P V TY+ +INGLC+TG  + A  + +EM+               
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 47  -----NGN-----------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                N N              GVV  PD V ++ +I  L K G +D+A +    MK+  
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD V Y  +I GFC     +EA ++  EM++QG   +VVT++ I++ LCK   + EA 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L   M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  E+E    L+++M+S+ I P  ++Y  L  G   +  V  AF+L+DEM   G  A  
Sbjct: 545 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 604

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
               T + G C+ G  V+A E    + +     D  +Y+ LI+G  K   +  A+ L + 
Sbjct: 605 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 664

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L+ DV+TYN++++     G+M +A  + L M  +GV PD   + +L+ G +  N 
Sbjct: 665 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 724

Query: 391 TSKVVELLHRMDER 404
             +   +   M +R
Sbjct: 725 LKEAFRVHDEMLQR 738



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G + NV T + +IN LC+        +   +M     E GV   PD V 
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM----EEKGVF--PDVVT 291

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+  C++G +++A EL+  M  K + P V TYN++I G C       AK +  EM+
Sbjct: 292 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 351

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T+++++ E C+N  M +A ++ + M   GV P+   ++ L+      G ++
Sbjct: 352 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 411

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G    VVTYNT+ 
Sbjct: 412 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +A+ LF  +     +
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LIDG CK   ++   EL++ +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +M  KG     +  NT++ G  R     K  E L  M
Sbjct: 592 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 630



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 189/341 (55%), Gaps = 2/341 (0%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ GL K G+VD A E+  ++    +  +V T N +I   C        K    +M ++
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 283

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P+VVT++ +++  C+ G +EEA +L++ M   G++P  F YN +++G C TG+  RA
Sbjct: 284 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 343

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M  +G   +  +Y+IL+   C+N  +  A  ++ EM S+G+ P +V+++ L IG
Sbjct: 344 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL-IG 402

Query: 245 LFEIHQ-VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L   +  +++A K F +M+  G+A D   Y   I G C+NG + EAL++   +    C L
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ +++GLCK   L  A ELF  +    +  D  T+  +I+    DG M+KA  LF
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M  + + PD V +NTL+ G  + +E  KV EL + M  R
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 563



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 178/350 (50%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C  + +++  ++    +   + +  E    +K K +   +   NS++ G       + A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV T +++++ LCKN K+E     L  M + GV P+   YNTL++ +
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ P  
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +AL+ FR 
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y+ LI G C++G +  A ++   +     + DVVTYN +++ LC +  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +A +LF +M  +GV PD   F TL+ G  ++   +K V L   M +RN
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 149/268 (55%), Gaps = 6/268 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LFT++   G  P+  T++TLING  + G+   A+ LFE MI  N       KPD V
Sbjct: 482 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVV 535

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK   ++K  EL   M  + I P+ ++Y  +I G+C     +EA RL+ EM
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  ++T + I+   C+ G   +A + L  M+  G+ P+   YNTL++GF     +
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ P   TY +L
Sbjct: 656 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 33/434 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  L   +   G +P V TY+ +INGLC+TG  + A  + +EM+               
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 47  -----NGN-----------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                N N              GVV  PD V ++ +I  L K G +D+A +    MK+  
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD V Y  +I GFC     +EA ++  EM++QG   +VVT++ I++ LCK   + EA 
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L   M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  E+E    L+++M+S+ I P  ++Y  L  G   +  V  AF+L+DEM   G  A  
Sbjct: 388 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 447

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
               T + G C+ G  V+A E    + +     D  +Y+ LI+G  K   +  A+ L + 
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 507

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L+ DV+TYN++++     G+M +A  + L M  +GV PD   + +L+ G +  N 
Sbjct: 508 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 567

Query: 391 TSKVVELLHRMDER 404
             +   +   M +R
Sbjct: 568 LKEAFRVHDEMLQR 581



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G + NV T + +IN LC+        +   +M     E GV   PD V 
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM----EEKGVF--PDVVT 134

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+  C++G +++A EL+  M  K + P V TYN++I G C       AK +  EM+
Sbjct: 135 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 194

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  T+++++ E C+N  M +A ++ + M   GV P+   ++ L+      G ++
Sbjct: 195 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 254

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G    VVTYNT+ 
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +A+ LF  +     +
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ LIDG CK   ++   EL++ +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +M  KG     +  NT++ G  R     K  E L  M
Sbjct: 435 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 473



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 189/341 (55%), Gaps = 2/341 (0%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           +++ GL K G+VD A E+  ++    +  +V T N +I   C        K    +M ++
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P+VVT++ +++  C+ G +EEA +L++ M   G++P  F YN +++G C TG+  RA
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           K +   M  +G   +  +Y+IL+   C+N  +  A  ++ EM S+G+ P +V+++ L IG
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL-IG 245

Query: 245 LFEIHQ-VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L   +  +++A K F +M+  G+A D   Y   I G C+NG + EAL++   +    C L
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+ +Y+ +++GLCK   L  A ELF  +    +  D  T+  +I+    DG M+KA  LF
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             M  + + PD V +NTL+ G  + +E  KV EL + M  R
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 406



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 178/350 (50%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C  + +++  ++    +   + +  E    +K K +   +   NS++ G       + A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV T +++++ LCKN K+E     L  M + GV P+   YNTL++ +
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ P  
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +AL+ FR 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y+ LI G C++G +  A ++   +     + DVVTYN +++ LC +  
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + +A +LF +M  +GV PD   F TL+ G  ++   +K V L   M +RN
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 149/268 (55%), Gaps = 6/268 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LFT++   G  P+  T++TLING  + G+   A+ LFE MI  N       KPD V
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVV 378

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK   ++K  EL   M  + I P+ ++Y  +I G+C     +EA RL+ EM
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  ++T + I+   C+ G   +A + L  M+  G+ P+   YNTL++GF     +
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ P   TY +L
Sbjct: 499 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 559 INGHVTQNNLKEAFRVHDEMLQRGFVPD 586


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 213/400 (53%), Gaps = 10/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+V TY+ +I+G C++G    AL + + ++  NG     C PD  
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDW 355

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC  G +D+A+ELL     +   P V+T+ ++I G+C A   ++A R+   M
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +    + ++  + V+++ L K  +++EA + L  M   G+ PN  +Y +++DG+C  G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMV 474

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  ME  GC  N ++Y  LI G  ++K++  A++L ++M   GI P V+ Y TL
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTL 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + H+ + AF+LF+ M+++G+  D  AY    D LCK+G   EA        ++  
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLT 594

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           ++   +Y+ L+DG  K+G    A  L   +      AD+ TY++++ ALC   K+++A  
Sbjct: 595 KV---TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M   GV  + VA+  ++   I+  +      L + M
Sbjct: 652 ILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 197/424 (46%), Gaps = 30/424 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV---------- 55
           L++ L   G  P+ +TY+T+I   C+ G   +A   F  +     +              
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 56  -------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
                              C+ +   YT +I GL +   V +A  L+  M     + ++ 
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLH 285

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            Y  +I+G C     ++A+ L  EM  +GV P+V T++ ++D  CK+G+M++A  +  LM
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            Q G  P+ + YN+L+ G C  G+++ A+EL     + G    V +++ LINGYCK + I
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL + S M+S   K  +  Y  L   L +  +++ A +  +EM  +G+A +   Y + 
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSI 464

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDG CK G +  ALE+F+ +    C  +  +Y  LI GL +  +L  A  L   +    +
Sbjct: 465 IDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGI 524

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
              V+ Y  +I   C   + D A  LF  ME  G+ PD  A+N L     ++    +   
Sbjct: 525 TPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYS 584

Query: 397 LLHR 400
            L R
Sbjct: 585 FLVR 588



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 208/455 (45%), Gaps = 60/455 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  P VI Y+TLI G C+      A  LFE M+  NG       PD  
Sbjct: 511 KAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFE-MMEKNG-----LTPDEQ 564

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  + D LCK G  ++A   L++   K +    VTY S++ GF  A +++ A  L  +M
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G + ++ T+SV++  LCK  K+ EA  +L+ M   GV+ N   Y  ++      G+ 
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK LF  M S G K +  +Y++ I+ YCK  +IE A  L  EM   G+ P VVTY+  
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIF 741

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK----NGYIVEALELFRTL- 296
             G   +  ++RAF     M       + W Y   +    K    N + ++   ++  + 
Sbjct: 742 INGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIE 801

Query: 297 ---------RILKCELD--IRSYSCLIDGLCKSGRLKIAWELF-HSLPRGV--------- 335
                    R++K  L+  + +YS +I G CK+ RL+ A  L  H L + +         
Sbjct: 802 LNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTM 861

Query: 336 ----------------LIADVV---------TYNIMIHALCADGKMDKAHDLFLDMEAKG 370
                            + D++         +Y+ +I  LC +G  D+A  LF D+    
Sbjct: 862 LIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMD 921

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              + VA+  L  G ++        +LL  MD R+
Sbjct: 922 YNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 176/346 (50%), Gaps = 1/346 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V Y T+I   CK+G +  A      +++  +  D  T N+++ G+C  +D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + M   G + N  ++++++  L +   + EA  L+ +M+Q G   N  +Y  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR++ A+ L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  P   T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN+L  GL    +++ A +L +     G       +   I+G CK   I +AL +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
              C+LD+++Y  LI+ L K  RLK A E  + +    L  +VV Y  +I   C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A ++F  ME +G  P+   + +L+ G I++ +  K + L+ +M E
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 3/305 (0%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN  +R     + +    +L+  ++ +G+ P+ VT++ ++   CK G +  A +   L+ 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G++ + +  N L+ G+C T  + +A  L + M  MGC+ N +SY+ILI G  + + + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L   M+  G    +  Y  L  GL +  ++  A  L DEM   GV    W Y   I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVL 336
           DG CK+G + +AL +   +    C  D  +Y+ LI GLC  G+L  A EL + ++ RG  
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARG-F 384

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
              V+T+  +I+  C   ++D A  +  +M +     D  A+  L+   I+     +  E
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 397 LLHRM 401
            L+ M
Sbjct: 445 TLNEM 449



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 150/364 (41%), Gaps = 22/364 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA L  K+   GC+ ++ TYS L+  LC+      AL++ ++M       GV C  + V 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS----GVKC--NIVA 667

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT II  + KEG  D AK L  +M      P   TY   I  +C      EA+ L  EM 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 727

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG--- 179
             GV P+VVT+ + ++     G M+ A   L+ M+     PN + Y  L+  F       
Sbjct: 728 RDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787

Query: 180 -------------RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                         +N   +L   M   G    V +YS +I G+CK   +E A  L   M
Sbjct: 788 AHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L K I P    Y  L     +I    +      +M   G      +Y   I GLC  G  
Sbjct: 848 LGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDY 907

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A  LF  L  +    +  ++  L DGL K+G +    +L  ++       D  +Y+++
Sbjct: 908 DRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967

Query: 347 IHAL 350
             ++
Sbjct: 968 TDSI 971



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 22/295 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +LF ++ + G +P+  TY+  I+  C+ G    A +L  EM       GV   PD V
Sbjct: 683 HAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERD----GVT--PDVV 736

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--------YANDS-- 111
            Y   I+G    G++D+A   L +M D +  P+  TY  +++ F         Y + S  
Sbjct: 737 TYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGM 796

Query: 112 ------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                 N   +L   MM  G+ P VVT+S I+   CK  ++EEA  LL+ M+   + PN 
Sbjct: 797 WNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNE 856

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            +Y  L+   C      +       M   G +  + SY  LI G C   + + A SL+ +
Sbjct: 857 EIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCD 916

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L        V +  L  GL +   V+   +L   M       D+ +Y    D +
Sbjct: 917 LLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 38/242 (15%)

Query: 181 VNRAKELFVSMESMGCKHNVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           V  A +   ++  +G K  V S   Y++ +    +    E    LYS ++ +G+ P  VT
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVT 181

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT--------------------------- 270
           YNT+ +   +   +  A + F  ++  G+  DT                           
Sbjct: 182 YNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMP 241

Query: 271 --------WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
                   ++Y   I GL +   + EAL L   +    C L++  Y+ LI GLCK GR+ 
Sbjct: 242 LMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIH 301

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  L   +P   ++  V TYN MI   C  G+M  A  +   ME  G  PD   +N+L+
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 383 LG 384
            G
Sbjct: 362 YG 363


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 182/326 (55%), Gaps = 4/326 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P AV Y ++I GLCK     +A +LL +M      PD+ TY ++I GFC +  S++A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFC 176
           F +++ +G +P+VVT+S ++D LCK G+++EA  L   MI+ G   PN   YN+L+ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+++ A  L   M   G   +V +Y+ L+NG+CK   ++ A  L ++M  KG+ P VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+ +L  GL   +++  A  +  EM+R   +   + Y T +DG C+   + EA +    L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             + C  ++ S++ +I GLCK  R   A EL     R     DVV Y  +I  LC + K+
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 357 DKAHDLFLDM-EAKGVAPDCVAFNTL 381
           D+A  ++  M E  G  P+ + ++T 
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 165/317 (52%), Gaps = 11/317 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P  +TY++LI+GLC+      A +L EEM+         C PD   YTT+I G CK    
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSG------CIPDIFTYTTLITGFCKSKKS 105

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSV 135
           D A  +  Q+  +   PDVVTY+ +I G C      EA  LF  M+  G   PN VT++ 
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C+ GKM+EA  LLE M + G  P+   Y TLM+GFC   R++ A +L   M   G
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +++ L++G C+   +  A+ +  EM  K   PTV TYNT+  G   ++Q+E A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 256 K-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           K + +EM       +  ++   I GLCK     EA+EL    R  +C  D+  Y+ +ID 
Sbjct: 286 KFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 315 LCKSGRLKIAWELFHSL 331
           LC+  ++  A  ++  +
Sbjct: 343 LCREKKVDEACRVYRKM 359



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 164/296 (55%), Gaps = 9/296 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   GC P++ TY+TLI G C++  +  AL +FE+++          +PD V
Sbjct: 72  EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF------RPDVV 125

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y+ +IDGLCKEG + +A +L  +M K  +  P+ VTYNS+I GFC     +EA  L   
Sbjct: 126 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 185

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G  P+VVT++ +M+  CK  ++++A  LL  M + G+ PN   + +LMDG C   R
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +   M    C   V++Y+ +++GYC+  ++E A     E +     P VV++N 
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNI 303

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +  GL ++++   A +L +E +R     D   Y T ID LC+   + EA  ++R +
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 153/276 (55%), Gaps = 8/276 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L A G  P+V+TYS LI+GLC+ G    A++LF  MI         C P+ V
Sbjct: 107 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPNTV 161

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G C+ G +D+A  LL +M +   +PDVVTY +++ GFC     ++A  L  +M
Sbjct: 162 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 221

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNVVTF+ +MD LC+  ++ +A  +L  M +    P  + YNT++DG+C   ++
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQL 281

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++    +E M C  NV S++I+I G CK      A+ L  E   +   P VV Y T+
Sbjct: 282 EEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 339

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTF 276
              L    +V+ A +++ +M +  G   ++  Y TF
Sbjct: 340 IDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 172/319 (53%), Gaps = 3/319 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           ++D    P  VTYNS+I G C A  ++EA  L  EM+  G  P++ T++ ++   CK+ K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYS 204
            ++A ++ E ++  G RP+   Y+ L+DG C  GR+  A +LF  M +S  C  N  +Y+
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G+C+  +++ A++L   M   G  P VVTY TL  G  ++ +++ A+ L ++M R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  +   + + +DGLC+   + +A+ +   +R   C   + +Y+ ++DG C+  +L+ A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +    L       +VV++NIMI  LC   +  +A +L  +   +   PD V + T++  
Sbjct: 285 RKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 385 CIRNNETSKVVELLHRMDE 403
             R  +  +   +  +M E
Sbjct: 343 LCREKKVDEACRVYRKMLE 361



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 1/205 (0%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+G CK +    A  L  EM+  G  P + TY TL  G  +  + + A ++F+++
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGR 320
              G   D   Y   IDGLCK G + EA++LF R ++   C  +  +Y+ LI G C+ G+
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A  L   +       DVVTY  +++  C   ++D A+DL   M  KG+ P+ V F +
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           LM G  R N  S  V +L  M  ++
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKS 260



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 34/68 (50%)

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           +   VTYN +I  LC   +  +A+DL  +M   G  PD   + TL+ G  ++ ++   + 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 397 LLHRMDER 404
           +  ++  R
Sbjct: 111 VFEQLVAR 118


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 195/379 (51%), Gaps = 9/379 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  LI   CR G    A+ + E+M     E G  C  +  +   
Sbjct: 270 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT----EHG--CATNTTLCNI 323

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A +LL  M     NPD ++Y +V++G C A   ++AK L  EM+   
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +E+A  L+E M + G       YN L++GFC+ G ++ A 
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL 443

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF    SM CK N  +Y+ L+ G C  + ++GA  L +EML     P VVT+N L    
Sbjct: 444 ELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFF 500

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E A +L ++M  HG   +   Y T +DG+ K+    +ALEL   L       D+
Sbjct: 501 CQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDV 560

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            ++S +I  L K  R++ A +LFH +    +    V YN ++  LC   ++D A D F  
Sbjct: 561 ITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAY 620

Query: 366 MEAKGVAPDCVAFNTLMLG 384
           M + G  P+   +  L+ G
Sbjct: 621 MVSNGCMPNESTYIILIEG 639



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 212/435 (48%), Gaps = 44/435 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A+  +++A GC PN++TY+ +ING+CR G    A     E++N    +G   +PD V
Sbjct: 196 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA----RELLNRLPSYGF--QPDTV 249

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ GLC     D  +EL  +M +KN  P+ VT++ +IR FC       A ++  +M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   N    +++++ +CK G++++A +LL  M   G  P+   Y T++ G C   R 
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 182 NRAKELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
           + AKEL   M                                E M   GC   V +Y+ L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+C    I+ AL L+  M     KP  +TY TL  GL    +++ A +L  EM R   
Sbjct: 430 VNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   +   +   C+ G++ EA+EL   +    C  ++ +Y+ L+DG+ K    + A E
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L H L    +  DV+T++ +I  L  + ++++A  LF  ++  G+ P  V +N ++LG  
Sbjct: 547 LLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLC 606

Query: 387 RNNETSKVVELLHRM 401
           +  E    ++    M
Sbjct: 607 KRCEIDNAIDFFAYM 621



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 197/387 (50%), Gaps = 9/387 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TY+ LI  LC  G    AL+L ++M+         C+P+ V YT +++ +C+    
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG------CQPNVVTYTVLLEAMCRNSGF 194

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  +L +M+ K   P++VTYN +I G C     ++A+ L   +   G QP+ V+++ +
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC + + ++  +L   M++    PN   ++ L+  FC  G V RA ++   M   GC
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A  L ++M S G  P  ++Y T+  GL    + + A +
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L +EM R+    +   + TFI  LC+ G I +A+ L   +    C + + +Y+ L++G C
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             G +  A ELF S+P      + +TY  ++  LC   ++D A +L  +M      P+ V
Sbjct: 435 VQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVV 491

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    +     + +EL+ +M E
Sbjct: 492 TFNVLVSFFCQKGFLEEAIELVEQMME 518



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 208/468 (44%), Gaps = 82/468 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR GH   A  L   M            PDA 
Sbjct: 94  DAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---------PVAPDAY 144

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  LC  G V  A  LL  M  +   P+VVTY  ++   C  +   +A  +  EM
Sbjct: 145 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+VT++VI++ +C+ G++++A +LL  +   G +P+   Y TL+ G C + R 
Sbjct: 205 RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRW 264

Query: 182 NRAKELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
           +  +ELF  M                                E M   GC  N    +I+
Sbjct: 265 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIV 324

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ---------------- 250
           IN  CK   ++ A  L ++M S G  P  ++Y T+  GL    +                
Sbjct: 325 INSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNC 384

Query: 251 -------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                              +E+A  L ++M  HG       Y   ++G C  G+I  ALE
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE 444

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LFR+   + C+ +  +Y+ L+ GLC + RL  A EL   + RG    +VVT+N+++   C
Sbjct: 445 LFRS---MPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFC 501

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
             G +++A +L   M   G  P+ + +NTL+ G  ++  +   +ELLH
Sbjct: 502 QKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 9/388 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V   + LI  LCR G T  A  +      G+G        D   Y T++ G C+ 
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-EGSGS-----PVDVFAYNTLVAGYCRY 124

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A+ L+  M    + PD  TY  +IR  C      +A  L  +M+ +G QPNVVT+
Sbjct: 125 GHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY 181

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V+++ +C+N   E+A  +L+ M   G  PN   YN +++G C  GRV+ A+EL   + S
Sbjct: 182 TVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS 241

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + +  SY+ L+ G C +K  +    L++EM+ K   P  VT++ L         VER
Sbjct: 242 YGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 301

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A ++ ++M  HG A +T      I+ +CK G + +A +L   +    C  D  SY+ ++ 
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC++ R   A EL + + R     + VT+N  I  LC  G +++A  L   M   G   
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
             V +N L+ G          +EL   M
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSM 449



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 10/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   + ++GC P+ I+Y+T++ GLCR      A  L  EM+  N      C P+ V
Sbjct: 336 DAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN------CPPNEV 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I  LC++G +++A  L+ QM +      VVTYN+++ GFC     + A  LF  M
Sbjct: 390 TFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN +T++ ++  LC   +++ A++L+  M++    PN   +N L+  FC  G +
Sbjct: 450 ---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFL 506

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M   GC  N+ +Y+ L++G  K+   E AL L   ++SKG+ P V+T++++
Sbjct: 507 EEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 566

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A +LF  +Q  G+      Y   + GLCK   I  A++ F  +    C
Sbjct: 567 IGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGC 626

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y  LI+GL   G LK A +L   L  RGVL
Sbjct: 627 MPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 3/313 (0%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV     +IR  C    +++A R+       G   +V  ++ ++   C+ G ++ A +L
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M    V P+A+ Y  L+   C  GRV  A  L   M   GC+ NV +Y++L+   C+
Sbjct: 134 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N   E A+++  EM +KG  P +VTYN +  G+    +V+ A +L + +  +G   DT +
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GLC +    +  ELF  +    C  +  ++  LI   C+ G ++ A ++   + 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 +    NI+I+++C  G++D A  L  DM + G  PD +++ T++ G  R     
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 393 KVVELLHRMDERN 405
              ELL+ M   N
Sbjct: 371 DAKELLNEMVRNN 383


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 209/434 (48%), Gaps = 45/434 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   G   +V++Y+ LI G C TG    A+ LF EM           +PD  +
Sbjct: 65  ARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----------QPDMHM 114

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK G  ++   +L +MK+    P    Y +V+   C+   + EA+ +  EM 
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P VVT + +++  CK G+M +A ++LELM   G +PN + YN L+ GFC  G+V+
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL---------------------- 220
           +A  L   M   G   +  +Y++LI G C +  IE A                       
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 221 -------------SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                        SL+  + ++GIKP  VT+N+L  GL +  +V+ A+K  ++M   G  
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            DT+ Y +FI+ LCK     E L     +     +    +Y+ +I  L K     +    
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           +  +       DVVTY   + A C +G++++A ++ ++M   GV  D +A+NTLM G   
Sbjct: 415 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 474

Query: 388 NNETSKVVELLHRM 401
             +T   V +L +M
Sbjct: 475 IGQTDHAVSILKQM 488



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY+ +I  LCR      AL     M+          +PDA  + ++I G C+   VD A+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGW------RPDAYTFNSLIVGYCRTNQVDVAR 66

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +L  +M  +    DVV+Y ++I GFC     +EA  LF EM     QP++  ++ ++  L
Sbjct: 67  DLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGL 122

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK G+ EE   +L  M ++G RP+   Y  ++D  C   +   A+E+   M   G    V
Sbjct: 123 CKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            + + +IN YCK   +  AL +   M  +G KP V TYN L  G     +V +A  L ++
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+  GV  D   Y   I G C +G+I  A  L R +       D  +Y+ LI+ LCK GR
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
              A  LF SL    +  + VT+N +I+ LC  GK+D A      M + G  PD   +++
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 381 LM 382
            +
Sbjct: 363 FI 364



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 27/406 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF  L+  G +PN +T+++LINGLC++G   +A    E+M++        C PD  
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG------CTPDTY 358

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++ I+ LCK     +    + +M  K++ P  V Y  VI       +     R + EM
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++  M   C  G++ EA  +L  M + GV  +   YNTLMDG    G+ 
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M S+    N F+Y IL+    + + +E  L L    + K I+ T V     
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV----- 533

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                        F LFD M+++    ++  Y + ++G  ++G   EA  L   ++    
Sbjct: 534 -------------FGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 580

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L+   Y+ L+   CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA +
Sbjct: 581 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKE 640

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETS---KVVELLHRMDER 404
           +F++   K  +PD + +  ++ G I+   +    +++ +L RM+ R
Sbjct: 641 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 686



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 173/339 (51%), Gaps = 4/339 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I  LC+   +  A   L  M      PD  T+NS+I G+C  N  + A+ LF +M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   +VV+++ +++  C+ G+++EA +L   M Q    P+  +Y  L+ G C  GR  
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               +   M+ +G + +  +Y+ +++  C  ++ + A  +  EM  KG+ P VVT   + 
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +  ++  A ++ + M+  G   + W Y   + G C  G + +A+ L   +R+    
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LI G C  G ++ A+ L   +    LIAD  TYN +I+ALC DG+ D+A  L
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  +E +G+ P+ V FN+L+ G  ++ +     + L +M
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 169/350 (48%), Gaps = 8/350 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +  ++   G  P V+T + +IN  C+ G    AL + E M + G       CKP+ 
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG-------CKPNV 217

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G C EG V KA  LL +M+   +NPD VTYN +IRG C       A RL   
Sbjct: 218 WTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 277

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +  T++ +++ LCK+G+ ++A  L + +   G++PNA  +N+L++G C +G+
Sbjct: 278 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 337

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP+ V Y  
Sbjct: 338 VDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 397

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +        + + EM   G   D   Y T +   C  G + EA  +   +    
Sbjct: 398 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             +D  +Y+ L+DG    G+   A  +   +     + +  TY I++  L
Sbjct: 458 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 145/308 (47%), Gaps = 4/308 (1%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           TYN+VIR  C   D   A R    M+  G +P+  TF+ ++   C+  +++ A  L + M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G   +   Y  L++GFC TGR++ A ELF  M+    + ++  Y+ L+ G CK    
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E  L +   M   G +P+   Y  +        + + A ++  EM   G+A         
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+  CK G + +AL +   +++  C+ ++ +Y+ L+ G C  G++  A  L + +    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D VTYN++I   C DG ++ A  L   ME  G+  D   +N L+    ++  T +   
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 397 LLHRMDER 404
           L   ++ R
Sbjct: 309 LFDSLETR 316



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   G  P++++Y  L++GL   G T  A  +F  M +   ++     PD 
Sbjct: 601 LDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 654

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           +++  IIDGL K+G  D ++E+++ ++  N  P   TY
Sbjct: 655 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 692


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 203/394 (51%), Gaps = 8/394 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F   P   TYS  I+ LC++      + L +E++    + G  C PD       I  L
Sbjct: 222 KGFCLTP--FTYSRWISALCQSNR----IELVQELLVDMDKLG--CSPDIWACNIYIYYL 273

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK+  +  A +++ +M+ K  +PDVVTY +V+ G C      EA  L+ EM+ + ++P+V
Sbjct: 274 CKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDV 333

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +   ++  LCKN K++EA +L   M+ + +  +  +YN L+ GF   G +++A ++   
Sbjct: 334 FSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISF 393

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M + GC+ ++ +Y+IL+N YC    +E A  L  +M + G+ P   +YN L  GL + HQ
Sbjct: 394 MRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQ 453

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +++AF    +    G   DT +    ID  CK   +  ALELF+ +     + D  +Y  
Sbjct: 454 LDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGT 513

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+GL   G   +A ELF  +    +  +V  YNIM+H LC  G   +A  +F  M  K 
Sbjct: 514 LINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKE 573

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V+PD V FNTL+    + +   + + L   M  R
Sbjct: 574 VSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTR 607



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K++  G  P+V+TY T+++GLC       A+ L+EEM+  +       KPD  
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRD------LKPDVF 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I GLCK   VD+A EL  +M   +I   V  YN++I GF  A   ++A ++   M
Sbjct: 335 SCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFM 394

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT++++++  C  G ME+A +L+  M   GV P+ + YN L+ G C T ++
Sbjct: 395 RTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQL 454

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A         +G   +  S +ILI+ +CK K+++ AL L+ EM  KG++   VTY TL
Sbjct: 455 DKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTL 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF +     A +LF++M    +  +   Y   +  LCK G+   A  +F  +   + 
Sbjct: 515 INGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEV 574

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI  L K  R   A  LF  +    +  D +T+  +I  L  +GK   A++
Sbjct: 575 SPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYE 634

Query: 362 LFLDMEAKGVAPD 374
           ++  M   G+  D
Sbjct: 635 VWEYMMENGIILD 647



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 195/398 (48%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   +   GC P++   +  I  LC+      AL + E+M            PD V Y T
Sbjct: 250 LLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKG------TSPDVVTYQT 303

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC      +A  L  +M  +++ PDV +  ++I G C  N  +EA  L   M+   
Sbjct: 304 VVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLD 363

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  ++ ++    + G +++A +++  M   G  P+   YN L++ +C  G + +A+
Sbjct: 364 IELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAE 423

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   ME+ G   + +SY+ L+ G CK  +++ A +  S+ +  G     V+ N L    
Sbjct: 424 KLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAF 483

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V+ A +LF EM   G+ AD   Y T I+GL   GY   A ELF  +   + + ++
Sbjct: 484 CKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNV 543

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ ++  LCK G  K A  +F  + +  +  D VT+N +I+ L    +  +A +LF D
Sbjct: 544 NLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKD 603

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M  +GV PD + F  L+ G +   +++   E+   M E
Sbjct: 604 MRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMME 641



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E L ++K + +      Y  ++ G+  A   +     F EM+  G +   V ++  +  L
Sbjct: 144 EFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVL 203

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            KN   +   +  ++ +  G     F Y+  +   C + R+   +EL V M+ +GC  ++
Sbjct: 204 VKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDI 263

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           ++ +I I   CK   +  AL +  +M +KG  P VVTY T+  GL +  +   A  L++E
Sbjct: 264 WACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEE 323

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M +  +  D ++    I GLCKN  + EA EL   +  L  EL +  Y+ LI G  ++G 
Sbjct: 324 MVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGS 383

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A+++   +       D+VTYNI+++  C  G M+KA  L   ME  GV PD  ++N 
Sbjct: 384 IDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQ 443

Query: 381 LMLGCIRNNETSK 393
           L+ G  + ++  K
Sbjct: 444 LLKGLCKTHQLDK 456



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 17/361 (4%)

Query: 47  NGNGEFGVVCKP-----DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSV 101
           N  G    + +P       +I   +   +C E  V+      L+  D  ++P VV  N V
Sbjct: 45  NSPGRLSELFRPVRMDISGIILQALERSMCSEPLVE------LERLDVELDPIVV--NLV 96

Query: 102 IRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           +RG    +DS  A R +     + G   +    + ++  L  +G     S+ L  +   G
Sbjct: 97  VRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQG 153

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V  +  +Y  L+ G+   G+ +   E F  M   GC+     Y+  I    KN   +   
Sbjct: 154 VALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVE 213

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             Y   L+KG   T  TY+     L + +++E   +L  +M + G + D WA   +I  L
Sbjct: 214 KYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYL 273

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK   + +AL++   +R      D+ +Y  ++ GLC + +   A  L+  + +  L  DV
Sbjct: 274 CKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDV 333

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +   +I  LC + K+D+A +L   M    +      +N L+ G  R     K  +++  
Sbjct: 334 FSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISF 393

Query: 401 M 401
           M
Sbjct: 394 M 394



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 12/217 (5%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEML----SKGIKPTVVTYNTLFIGLFEIHQ 250
           G  H+ F+ + L++       ++G  +L SE L    S+G+      Y  L  G     +
Sbjct: 118 GFDHSQFAIAYLVSLLF----MDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGK 173

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK--CELDIRSY 308
            +   + FDEM   G       Y  +I  L KN    + +E +  + + K  C L   +Y
Sbjct: 174 FDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNC-CFDLVEKYYDMALAKGFC-LTPFTY 231

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S  I  LC+S R+++  EL   + +     D+   NI I+ LC   ++  A  +   M  
Sbjct: 232 SRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRT 291

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           KG +PD V + T++ G   N + ++ + L   M +R+
Sbjct: 292 KGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRD 328


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 220/432 (50%), Gaps = 29/432 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING-----NGEFGVV- 55
           EA  L  K+K F C P+ ++Y+T+++ LC+ G    A +L  +M N         F ++ 
Sbjct: 230 EAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILV 289

Query: 56  ---CK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                    PD   Y  +I GLCK+G +D+A  L  +M++  + 
Sbjct: 290 SGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL 349

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDVVTYN++I G    + S +   L  +M  +GV+PN VT++V++    K GKM+ A   
Sbjct: 350 PDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 409

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G  P+   +NTL++G+C  GR++ A  +   M   G K N  + + +++  C 
Sbjct: 410 LRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 469

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            ++++ A  L S    +G     V+Y TL +G F+  +   A KL+DEM+   +      
Sbjct: 470 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I GLC +G   ++++    L       D  +Y+ +I G C+ G+++ A++  + + 
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +     D+ T NI++  LC +G +DKA  LF    +KG A D V +NT++ G  + +   
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649

Query: 393 KVVELLHRMDER 404
           +  +LL  M+E+
Sbjct: 650 EAFDLLAEMEEK 661



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 208/399 (52%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           + A+F+ +   G + N  T++ LI G C       A+ L  +M +        C PD V 
Sbjct: 196 SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKD------FSCFPDNVS 249

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TI+D LCK+G +++A++LLL MK+  + P+  T+N ++ G+C      EA ++   M 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+V T+++++  LCK+GK++EA +L + M  + + P+   YNTL++G        
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  EL   ME  G K N  +Y++++  Y K  +++ A +   +M   G  P  VT+NTL 
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  ++  AF++ DEM R G+  ++    T +  LC    + +A +L  +       
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D  SY  LI G  K G+   A +L+  +    +I  ++TYN MI  LC  GK D++ D 
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK 549

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++   G+ PD   +NT++LG  R  +  K  +  ++M
Sbjct: 550 LNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 194/373 (52%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++     P+V+TY+TLING      ++    L ++M  G G      KP+AV
Sbjct: 335 EAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM-EGKG-----VKPNAV 388

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++    KEG +D A   L +M++   +PD VT+N++I G+C A   +EA R+  EM
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ N VT + I+  LC   K+++A +LL    + G   +   Y TL+ G+   G+ 
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L+  M+      ++ +Y+ +I G C + + + ++   +E+L  G+ P   TYNT+
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G     QVE+AF+  ++M +     D +     + GLC  G + +AL+LF T      
Sbjct: 569 ILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGK 628

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +Y+ +I GLCK  R + A++L   +    L  D  TYN ++ AL   G+M +A +
Sbjct: 629 AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEE 688

Query: 362 LFLDMEAKGVAPD 374
               +  +G   D
Sbjct: 689 FMSRIVEQGKLQD 701



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 191/402 (47%), Gaps = 38/402 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA +F ++K    +PN++T +TLIN L R                         KP   +
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVR----------------------YPSKPSVYL 195

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              I   + K G                +  +  T+N +I G C  N  +EA  L  +M 
Sbjct: 196 SKAIFSDVIKLG----------------VKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    P+ V+++ I+D LCK GK+ EA  LL  M   G+ PN   +N L+ G+C  G + 
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M       +V++Y++LI G CK+ +I+ A  L  EM +  + P VVTYNTL 
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+     + F+L D+M+  GV  +   Y   +    K G +  A    R +      
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +++ LI+G CK+GRL  A+ +   + R  L  + VT N ++H LC + K+D A+ L
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                 +G   D V++ TL++G  ++ ++ + ++L   M E+
Sbjct: 480 LSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 29/270 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L+ ++K     P++ITY+T+I GLC +G T  +++   E++    E G+V  PD 
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL----ESGLV--PDE 562

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y TII G C+EG V+KA +   +M  K+  PD+ T N ++RG C     ++A +LF  
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G   + VT++ I+  LCK  + EEA  LL  M +  + P+ + YN ++      GR
Sbjct: 623 WISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGR 682

Query: 181 VNRAKELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIE 217
           +  A+E    +   G                          N  ++S  IN  C   + +
Sbjct: 683 MKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYK 742

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
            A+ +  E   KGI     TY +L  GL +
Sbjct: 743 DAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL--------------------- 245
           I  Y        A  +++ M    +KP ++T NTL   L                     
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 246 ---------FEI--------HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
                    F I        +++  A  L  +M+      D  +Y T +D LCK G + E
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L   ++      +  +++ L+ G CK G LK A ++   + +  ++ DV TYN++I 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            LC DGK+D+A  L  +ME   + PD V +NTL+ GC   + + K  EL+ +M+
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA    K++  G EPN++TY +LING    G    A  + + M     E GV    + V
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM----SEKGV--SRNVV 297

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT +I G CK+  +D+A+++L  M+++  + PD   Y  +I G+C     ++A RL  E
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++ N+   + +++  CK G++ EA  ++  M+   ++P+++ YNTL+DG+C  G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L   M   G +  V +Y+ L+ G C+    + AL ++  M+  G+ P  V Y+T
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF++   E A  L+ ++   G       + T I GLCK G +VEA E+F  ++ L 
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y  LIDG CK+  +  A+++  ++ R  +   +  YN +I  L    ++ +  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           DL  +M  +G+ P+ V +  L+ G  +     K       M E
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 7/383 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   G  P++ + ++L+N L + G T  A  ++++MI      G+V  PD  +
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFM 228

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + +++  CK+G VD+A   + +M++  + P++VTY+S+I G+    D   AK +   M 
Sbjct: 229 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMS 288

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV 181
           ++GV  NVVT+++++   CK  KM+EA ++L  M  +  + P+   Y  L+DG+C TG++
Sbjct: 289 EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKI 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M  +G K N+F  + LINGYCK  EI  A  + + M+   +KP   +YNTL
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G         AF L D+M + G+      Y T + GLC+ G   +AL+++  +     
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGV 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   YS L+DGL K    + A  L+  +         +T+N MI  LC  GKM +A +
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F  M+  G +PD + + TL+ G
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDG 551



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 208/469 (44%), Gaps = 73/469 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + T++  +  +P+  +Y+TL++G CR GHT  A NL ++M+    E      P  +
Sbjct: 385 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVL 438

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ GLC+ G  D A ++   M    + PD V Y++++ G     +   A  L+ ++
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + +TF+ ++  LCK GKM EA ++ + M  +G  P+   Y TL+DG+C    V
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 182 NRA-----------------------------------KELFVSMESMGCKHNVFSYSIL 206
            +A                                    +L   M   G   N+ +Y  L
Sbjct: 559 GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK   ++ A S Y EM   G+   ++  +T+  GL+ + +++ A  L  +M  HG 
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 267 AAD--------------------------------TWAYRTFIDGLCKNGYIVEALELFR 294
             D                                   Y   I GLCK G + +A   F 
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 738

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            L +     D  +Y  LI G   +G +  A+ L   + R  L+ ++VTYN +I+ LC   
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 798

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +D+A  LF  +  KG+ P+ V +NTL+ G  +        +L  +M E
Sbjct: 799 NVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L+  + A G   + IT++T+I+GLC+ G  + A  +F++M +      + C PD + 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD------LGCSPDGIT 544

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG CK   V +A ++   M+ + I+P +  YNS+I G   +    E   L  EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG 604

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+VT+  ++D  CK G +++A      M + G+  N  + +T++ G    GR++
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 183 RAKELFVSMESMG----------------------------CK----HNVFSYSILINGY 210
            A  L   M   G                            CK     N   Y+I I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A   +S +  KG  P   TY TL  G      V+ AF+L DEM R G+  + 
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+GLCK+  +  A  LF  L       ++ +Y+ LIDG CK G +  A++L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN-- 388
           +    +   VVTY+ +I+ LC  G ++++  L   M   GV    + + TL+ G  +   
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN 904

Query: 389 -NETSKVVELLHRMD 402
            NE SK   L   M+
Sbjct: 905 YNEMSKPEALKQNMN 919



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 176/375 (46%), Gaps = 61/375 (16%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA---------------LNLFEEM 45
           +EA  +F K+K  GC P+ ITY TLI+G C+  +   A               + ++  +
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSL 583

Query: 46  INGN-------------GEFGVV-CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           I+G               E G+    P+ V Y  +IDG CKEG +DKA     +M +  +
Sbjct: 584 ISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-------------------------- 125
           + +++  ++++ G       +EA  L  +M+D G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 126 ------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +++ +  LCK GK+++A +   ++   G  P+ F Y TL+ G+   G
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P VVTYN
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G  +I  ++ AFKL D+M   G++     Y   I+GLCK+G I  +++L   +   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 300 KCELDIRSYSCLIDG 314
             +  +  Y  L+ G
Sbjct: 884 GVDSKLIEYCTLVQG 898



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 186/390 (47%), Gaps = 22/390 (5%)

Query: 16  EPNVITYSTLINGLCRT---GHTIVALN--------------LFEEMINGNGEFGVVCKP 58
            PNV +Y  L++ L R      T   LN              +++E++    EF      
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF---- 154

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              ++  I+    ++G    A  +   M      P + + NS++       +++ A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G+ P+V   S++++  CK+GK++EA+  ++ M  +GV PN   Y++L++G+   
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVT 237
           G V  AK +   M   G   NV +Y++LI GYCK  +++ A  +   M  +  + P    
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G     +++ A +L DEM R G+  + +   + I+G CK G I EA  +   + 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  SY+ L+DG C+ G    A+ L   + +  +   V+TYN ++  LC  G  D
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
            A  ++  M   GVAPD V ++TL+ G  +
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFK 484



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 6/195 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F+ L   G  P+  TY TLI+G    G+   A  L +EM+      G+V  P+ V
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR----GLV--PNIV 785

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCK   VD+A+ L  ++  K + P+VVTYN++I G+C   + + A +L  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P+VVT+S +++ LCK+G +E + +LL  MI+ GV      Y TL+ G   T   
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905

Query: 182 NRAKELFVSMESMGC 196
           N   +     ++M C
Sbjct: 906 NEMSKPEALKQNMNC 920



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 36/274 (13%)

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F +I+    + G  + A  + + M + G  P+    N+L++     G  + A  ++  M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G   +VF  SI++N +CK+ +++ A     +M + G++P +VTY++L  G   +  VE
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  +   M   GV+ +                                   + +Y+ LI
Sbjct: 279 AAKGVLKFMSEKGVSRN-----------------------------------VVTYTLLI 303

Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G CK  ++  A ++   +     L+ D   Y ++I   C  GK+D A  L  +M   G+
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +    N+L+ G  +  E  +   ++ RM + N
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 204/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A+ +  K+   G  PNV+TY T I GLC+ G   VA  L + +   N      C     
Sbjct: 228 RASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHC----- 282

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GLC+ G +D+A E+  +MK+  I PDV +Y+ +I GFC     ++A  +F EM
Sbjct: 283 -FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ ++S+++D  CK G++++A ++ E M   G+ P+ + Y+ L+DGFC  G +
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A + +  M S     + F+Y  LI GY K+K+   AL  +  M   G+ P  +  N +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                      +A  L ++ Q +GV  + ++Y  FI  +C+     +AL+L   +     
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS LI    K    + A  LF  + +  +  +V TY I+I+   +D KMD A+ 
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M+   V PD +A+ +L+ G     E ++   L   M  
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR 623



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +F ++K  G  P+V +YS LI+G CR G    A  +F+EM N     G++  P+  
Sbjct: 298 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS----GIL--PNIY 351

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG CKEG VDKA E+  +MK+  I PDV +Y+ +I GFC   D + A + + EM
Sbjct: 352 SYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+   +  ++    K+ +   A +   +M ++G+ P+    N ++  +C     
Sbjct: 412 TSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A  L    +  G   N +SY+  I+  C+    E AL L   ML + + P VV Y+TL
Sbjct: 472 NKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +    E+A  LF +M + G+  +   Y   I+    +  +  A  LF+ ++  + 
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ L+ G C +G +  A  LF  + R     +VVTY   I+      K ++AH 
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK 651

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L+  M+ +GV PD + +  L+       E ++   L   M +
Sbjct: 652 LYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQ 693



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ +F +++  G  PN+ +YS LI+G C+ G    AL +FEEM N     G++  PD  
Sbjct: 333 QASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS----GIL--PDVY 386

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG C++G +D A +   +M   N +P    Y S+I+G+  +     A + F  M
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+ +  + I+   C+     +A  L E   + GV  N + YN  +   C     
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M       +V +YS LI+ + K    E A+ L+ +M   GI   V TY T+
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY-TI 565

Query: 242 FIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            I LF    +++ A++LF  M+   V  D  AY + + G C  G +  A  LF  +    
Sbjct: 566 LINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG 625

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ +Y+C I+   K  +   A +L+  +    +  D + Y ++I A C  G+M++A 
Sbjct: 626 CSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAE 685

Query: 361 DLFLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF +M+ +G   P+ V +  L+   I+ N+  +  +L   M  +
Sbjct: 686 ALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAK 730



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 185/398 (46%), Gaps = 37/398 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  L  FG  PN+ TY+ ++N  CR                     GV C  D      
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCR---------------------GVGCSVD------ 225

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
                     + +A E+L ++      P+VVTY + I+G C       A RL   +  + 
Sbjct: 226 ----------IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKN 275

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              N   F+ ++  LC+ G ++EAS++ + M   G+ P+ + Y+ L+DGFC  GRV++A 
Sbjct: 276 QPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQAS 335

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E+F  M + G   N++SYSILI+G+CK   ++ AL ++ EM + GI P V +Y+ L  G 
Sbjct: 336 EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                ++ A K ++EM  +  +   + Y + I G  K+     AL+ FR ++ L    D 
Sbjct: 396 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 455

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + ++   C+      A  L        +  +  +YN  IH +C     +KA  L   
Sbjct: 456 IACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPV 515

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M  + V PD V ++TL+    +   + K V L  +M +
Sbjct: 516 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTK 553



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 163/347 (46%), Gaps = 4/347 (1%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V++  +I        ++ A  + ++ KD  I  ++++ N +++     N  +  + LF  
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 121 MMDQGVQPNVVTFSVIMDELCK----NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++  G +PN+ T++++M+  C+    +  +  AS++L  +   G  PN   Y T + G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G    A  L  ++       N   ++ +I G C+   ++ A  ++ EM + GI P V 
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           +Y+ L  G     +V++A ++F EM+  G+  + ++Y   IDG CK G + +ALE+F  +
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      D+ SYS LIDG C+ G +  A + +  +           Y  +I       + 
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQF 436

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             A   F  M+  G+ PD +A N ++    R  + +K + L  +  E
Sbjct: 437 ANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQE 483



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 14/316 (4%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D+VT+        Y  ++ +A  L   ++D  V+ + V F +++     N  +E A+ + 
Sbjct: 110 DIVTF--------YKEENRDAGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVF 159

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
                 G+  N    N L+       RV+  + LF  +   G + N+ +Y+I++N +C+ 
Sbjct: 160 VRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRG 219

Query: 214 KEIEGALSLYSEMLSK----GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                 +   SE+L K    G  P VVTY T   GL ++     A++L   + R     +
Sbjct: 220 VGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLN 279

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              +   I GLC+ G + EA E+F+ ++      D+ SYS LIDG C+ GR+  A E+F 
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    ++ ++ +Y+I+I   C +G++DKA ++F +M+  G+ PD  +++ L+ G  R  
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKG 399

Query: 390 ETSKVVELLHRMDERN 405
           +    ++    M   N
Sbjct: 400 DMDSAIKFWEEMTSNN 415



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 7/216 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+ YSTLI+   +  ++  A+ LF +M      F V        YT +I+    +  +
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK------TYTILINLFISDCKM 576

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  L   MK+  + PD + Y S++ GFC   +   A+ LF EM  +G  PNVVT++  
Sbjct: 577 DVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCF 636

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG- 195
           ++E  K  K  +A +L E M + GV P+  +Y  L+  FC TG +NRA+ LF  M+  G 
Sbjct: 637 INEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGR 696

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           C  NV  Y+ LIN Y K  + + A  LY EM +KG+
Sbjct: 697 CTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 6/372 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L+  G  PNV+ Y+TLI+G C+ G    A   F++M    GE G+V   +   +T +I+G
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM----GEMGLVA--NQYTFTVLING 241

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L K+G      +L  +MK   + P++ TYN ++  +C       A  LF EM ++GV+ N
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVT++ ++  +C+  ++ EA +L++ M +  V PN   YNTL+ GFC  G +++A  L  
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            ++S G   ++ +Y+ILI GY K    +G   L  EM  +GI P+ VT   L      + 
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++E+AF+++  M++ G+  D + Y   I GLC  G + E+ +LFR++  +  E     Y+
Sbjct: 422 EMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYN 481

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +I G CK      A  L   +    L+ +V +Y+ +I  LC DGK ++A  L   M   
Sbjct: 482 TMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIEL 541

Query: 370 GVAPDCVAFNTL 381
            + P     N +
Sbjct: 542 QLKPSASILNMI 553



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 199/388 (51%), Gaps = 9/388 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+  +++L+  L R+       N FE+      E     K D   +  +I G C+ G +
Sbjct: 128 PNI--FNSLLGSLVRS-------NCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNL 178

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DK+ +LL  ++D  ++P+VV Y ++I G C   D   A+  F +M + G+  N  TF+V+
Sbjct: 179 DKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVL 238

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ L K G  ++   L E M   G+ PN + YN LM+ +C  G++ RA +LF  M   G 
Sbjct: 239 INGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGV 298

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + NV +Y+ LI G C+ + +  A  L  +M    + P ++TYNTL  G  ++  +++A  
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D+++ +G++     Y   I+G  K G      +L R +          + + LID   
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV 418

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +   ++ A++++ S+ +  L+ DV  Y ++IH LC  G M ++  LF  M    V P  V
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +NT++ G  + + + + + LL  M+ +
Sbjct: 479 IYNTMIHGYCKEDNSYRALRLLREMEAK 506



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI--NPDVVT--YNSVIRGFCYANDSNEAK 115
           A++Y +II+   K   +DKA     +M DK +   P++      S++R  C+     E  
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCF-----EKA 147

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            LF   + + V+ +V +F +++   C+NG ++++ QLL L+  +G+ PN  +Y TL+DG 
Sbjct: 148 WLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGC 207

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G + RA+  F  M  MG   N +++++LING  K    +    L+ +M   G+ P +
Sbjct: 208 CKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNL 267

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TYN L        ++ RAF LFDEM+  GV A+   Y T I G+C+   + EA +L   
Sbjct: 268 YTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQ 327

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      ++ +Y+ LI G C  G L  A  L   L    L   +VTYNI+I      G 
Sbjct: 328 MKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
                DL  +ME +G++P  V    L+   +R  E  K  ++   M++
Sbjct: 388 WKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEK 435



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 10/324 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F K+   G   N  T++ LINGL + G      +LFE+M   NG F     P+   
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM-KINGLF-----PNLYT 269

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +++  C EG + +A +L  +M+++ +  +VVTYN++I G C      EA++L  +M 
Sbjct: 270 YNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMK 329

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V PN++T++ ++   C  G +++AS LL+ +   G+ P+   YN L++G+   G   
Sbjct: 330 KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWK 389

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              +L   ME  G   +  + ++LI+ Y + +E+E A  +YS M   G+ P V  Y  L 
Sbjct: 390 GVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLI 449

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     ++ + KLF  M    V      Y T I G CK      AL L R +      
Sbjct: 450 HGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLV 509

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWE 326
            ++ SYS +I  LCK G+    WE
Sbjct: 510 PNVASYSSIIGVLCKDGK----WE 529



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 169/313 (53%), Gaps = 10/313 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF K+K  G  PN+ TY+ L+N  C  G    A +LF+EM     E GV  + + V Y T
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM----RERGV--EANVVTYNT 307

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G+C+E  V +A++L+ QMK   ++P+++TYN++I GFC   + ++A  L  ++   G
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P++VT++++++   K G  +  + L   M   G+ P+      L+D +     + +A 
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++ SME  G   +V+ Y +LI+G C    ++ +  L+  M    ++P+ V YNT+  G 
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +     RA +L  EM+  G+  +  +Y + I  LCK+G   EA  L   +     EL +
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM----IELQL 543

Query: 306 RSYSCLIDGLCKS 318
           +  + +++ + K+
Sbjct: 544 KPSASILNMISKA 556



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 6/240 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K     PN+ITY+TLI G C  G+   A +L +++   NG       P  V
Sbjct: 320 EAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL-KSNG-----LSPSLV 373

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G  K G      +L  +M+ + I+P  VT   +I  +    +  +A +++  M
Sbjct: 374 TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+V  + V++  LC  G M+E+S+L   M ++ V P+  +YNT++ G+C     
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  L   ME+ G   NV SYS +I   CK+ + E A  L  +M+   +KP+    N +
Sbjct: 494 YRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 48/325 (14%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A  LF   + QG Q    + S ++  L  + K+  A  L+  ++   +    F   +L+
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-- 230
                    +    L               Y  +IN + K++ ++ AL  ++EM+ KG  
Sbjct: 80  HHLTQNQNPSMTTALL--------------YESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 231 --------------------------------IKPTVVTYNTLFIGLFEIHQVERAFKLF 258
                                           +K  V ++  +  G  E   ++++F+L 
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLL 185

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             +Q  G++ +   Y T IDG CKNG I  A   F  +  +    +  +++ LI+GL K 
Sbjct: 186 GLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKK 245

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G  K  ++LF  +    L  ++ TYN +++  C +GK+ +A DLF +M  +GV  + V +
Sbjct: 246 GLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTY 305

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           NTL+ G  R     +  +L+ +M +
Sbjct: 306 NTLIGGMCREERVWEAEKLVDQMKK 330


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 210/408 (51%), Gaps = 16/408 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------- 52
           A  LF  + + GC PNV+TY+ LI+G C++G    A  ++  M  GN +           
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKID 627

Query: 53  -GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G +  P+   Y  ++DGLCK   V +A++LL  M  +   P+ + Y+++I GFC     
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M ++G  PNV T+S ++D L K+ +++ A ++L  M++    PN  +Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A +L DEM++         YR  I+G   N   + +L 
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLG 865

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHA 349
           L   +        I +Y  LID  CK+GRL++A EL   +        AD   Y+ +I +
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIES 925

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L    K+DKA +L+ DM  +G  P+   F  L+ G IR N   + ++L
Sbjct: 926 LSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 200/416 (48%), Gaps = 18/416 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAV 61
           A  L  K+   GC+P  + Y+ LI G+C     + +L++ E      GE        + V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +   LC  G  +KA  ++ +M  K   PD  TY+ VI   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V T+++++D  CK G +++A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M               
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 231 -----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                  P + TY  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  +F  +       ++ +YS LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G  +  +  K +EL+ +M
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 28/413 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+   +++LI+  CR+G    A  L ++M    G+ G  C+P  V+Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   ++ A++   +M D ++  + V  +++ R  C A    +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K++ A  L E M    V P+ F Y  L+D FC  G + +A++ 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P VVTY  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEALE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   + +  CE +   Y  LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D ++D A  +   M     AP+ + +  ++ G  +  +T +   L+  M+E+
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 36/430 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    +++++  C PNV+TY  L+ G  R         +   MI         C P   
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG------CYPSRR 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
           I+ ++I   C+ G    A +LL +M D    P  V YN +I G C     NE        
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC----GNEKLPSLDVL 426

Query: 114 --AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A++ + EM+D  V  N V  S +   LC  GK E+A  ++  M+  G  P+   Y+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +   C   +V+ A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTY  L     +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 292 LFRTLR----ILKCEL------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           ++  +R    I   ++            +I +Y  L+DGLCK+ ++K A +L   +    
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              + + Y+ +I   C  GK+D+A  +F  M  +G  P+   +++L+    ++      +
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 396 ELLHRMDERN 405
           ++L RM E +
Sbjct: 727 KVLSRMLENS 736



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 50/420 (11%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII--------------- 67
           + LI   CR G   VAL    E +    + G   KP  + Y  ++               
Sbjct: 201 NVLIRKCCRNGLWNVAL----EELGRLKDLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 68  -----------DG---------LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                      DG         LCK G   + +E L  ++ +    D V Y  +I G C 
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCE 311

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A+   EA      M      PNVVT+ +++    +  ++    ++L +MI  G  P+  +
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE------IEGALS 221
           +N+L+  +C +G  + A +L   M   GC+     Y+ILI G C N++      +E A  
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            Y EML   +    V  + L   L    + E+A+ +  EM   G   DT  Y   I  LC
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
               +  A  LF  ++      D+ +Y+ LID  CK G L+ A + F  + R     +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY  +IHA     KM  A++LF  M ++G  P+ V +  L+ G  ++ +  K  ++  RM
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 171/354 (48%), Gaps = 17/354 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDA 60
           EA  L   +   GCEPN I Y  LI+G C+ G    A  +F +M   G G       P+ 
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG-------PNV 706

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++ID L K+  +D A ++L +M + +  P+V+ Y  +I G C    ++EA RL   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PNVVT++ ++D   K GK+++  +L+  M   G  PN   Y  L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +L   M+      ++  Y  +I G+  N+E   +L L  E+      P +  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 241 LFIGLFEIHQVERAFKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-- 296
           L     +  ++E A +L  EM       AAD   Y + I+ L     + +A EL+  +  
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           R    EL I  Y  L+ GL +  R + A +L   + + V +++  +  I+ HA+
Sbjct: 945 RGGIPELSIFFY--LVKGLIRINRWEEALQLSDCICQMVHVSNSSSL-ILKHAI 995



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 153/381 (40%), Gaps = 44/381 (11%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +   +I   C+ G  + A E L ++KD    P  +TYN+++R F  A+  + A  +  EM
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G   +  T    +  LCK G+  EA  L+E   +   + +  +Y  ++ G C     
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLF 315

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +    M S  C  NV +Y IL+ G  + +++     + S M+++G  P+   +N+L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN------------------ 283
                       A+KL  +M   G       Y   I G+C N                  
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435

Query: 284 -----------------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
                                  G   +A  + R +       D  +YS +I  LC + +
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A+ LF  +    ++ DV TY I+I + C  G + +A   F +M   G AP+ V +  
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+   ++  + S   EL   M
Sbjct: 556 LIHAYLKARKMSSANELFEMM 576



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 155/396 (39%), Gaps = 71/396 (17%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR------------ 103
           C  DAV+ + +I     +GF  K ++ L Q ++K     VV   S+++            
Sbjct: 94  CSNDAVLISDVIRNT-GDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWA 152

Query: 104 ----GF---------------CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
               G+               C  ND    ++   E+ D+  +      +V++ + C+NG
Sbjct: 153 GRQIGYGHTGPVYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNG 211

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTL--------------------------MDGFC-- 176
               A + L  +  +G +P+   YN L                          MDG+   
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 177 ----LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
               L  +  R +E    +E    K +   Y+ +I+G C+    E A+   S M S    
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTY  L  G     Q+ R  ++   M   G       + + I   C++G    A +L
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGR------LKIAWELFHSLPRGVLIADVVTYNIM 346
            + +    C+     Y+ LI G+C + +      L++A + +  +    ++ + V  + +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              LC  GK +KA+ +  +M +KG  PD   ++ ++
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 15/252 (5%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP+ +TYN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
               F+  LCK G   EAL L         +LD   Y+ +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                I +VVTY I++       ++ +   +   M  +G  P    FN+L+    R+ + 
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 392 SKVVELLHRMDE 403
           S   +LL +M +
Sbjct: 386 SYAYKLLKKMGD 397


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           +S  +   C+      A+ L +EM N         KPD V Y  +I+G+CKEG +D+A +
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIK 138

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            L  M      P+V+T+N ++R  C      +A++L  +M+ +G  P+VVTF+++++ LC
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + G +  A  +LE M   G  PN+  YN L+ GFC   +++RA E    M S GC  ++ 
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L+   CK+ +++ A+ + +++ SKG  P ++TYNT+  GL ++ + ERA KL DEM
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R G+  D   Y + + GL + G + EA++ F  L  L    +  +Y+ ++ GLCKS + 
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
             A +    +          TY I+I  +  +G   +A DL  ++ ++G+
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 181/342 (52%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++  +   CKE  V +A +LL +M++K   PDVVTYN +I G C     +EA +    M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G QPNV+T ++I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA ++   M   GC  N  SY+ L++G+CK K+++ A+     M+S+G  P +VTYNTL 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +V+ A ++ +++   G +     Y T IDGL K G    A++L   +R    +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            DI +YS L+ GL + G++  A + FH L    +  + +TYN ++  LC   + D+A D 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              M +K   P    +  L+ G        + ++LL+ +  R
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 178/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  G +P+V+TY+ LING+C+ G    A+     M +    +G  C+P+ +
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS----YG--CQPNVI 153

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+  +C  G    A++LL  M  K  +P VVT+N +I   C       A  +  +M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM+ A + L++M+  G  P+   YNTL+   C  G+V
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   + S GC   + +Y+ +I+G  K  + E A+ L  EM  KG+KP ++TY++L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +V+ A K F +++  G+  +   Y + + GLCK+     A++    +   +C
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
           +    +Y+ LI+G+   G  K A +L + L  RG++
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 152/273 (55%), Gaps = 8/273 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           M+A  L + +   GC P+V+T++ LIN LCR G    A+++ E+M ++G       C P+
Sbjct: 169 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-------CTPN 221

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           ++ Y  ++ G CKE  +D+A E L  M  +   PD+VTYN+++   C     + A  +  
Sbjct: 222 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 281

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++  +G  P ++T++ ++D L K GK E A +LL+ M + G++P+   Y++L+ G    G
Sbjct: 282 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 341

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KPT  TY 
Sbjct: 342 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 401

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            L  G+      + A  L +E+   G+   + A
Sbjct: 402 ILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 40/80 (50%)

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             +  +S  +   CK   +  A +L   +       DVVTYN++I+ +C +G++D+A   
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
             +M + G  P+ +  N ++
Sbjct: 140 LNNMPSYGCQPNVITHNIIL 159


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 210/408 (51%), Gaps = 16/408 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------- 52
           A  LF  + + GC PNV+TY+ LI+G C++G    A  ++  M  GN +           
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKID 627

Query: 53  -GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G +  P+   Y  ++DGLCK   V +A++LL  M  +   P+ + Y+++I GFC     
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M ++G  PNV T+S ++D L K+ +++ A ++L  M++    PN  +Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A +L DEM++         YR  I+G   N   + +L 
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLG 865

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHA 349
           L   +        I +Y  LID  CK+GRL++A EL   +        AD   Y+ +I +
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIES 925

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L    K+DKA +L+ DM  +G  P+   F  L+ G IR N   + ++L
Sbjct: 926 LSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 201/419 (47%), Gaps = 18/419 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAV 61
           A  L  K+   GC+P  + Y+ LI G+C     + +L++ E      GE        + V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +   LC  G  +KA  ++ +M  K   PD  TY+ VI   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V T+++++D  CK G +++A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M               
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 231 -----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                  P + TY  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  +F  +       ++ +YS LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G  +  +  K +EL+ +M  +
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 28/413 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+   +++LI+  CR+G    A  L ++M    G+ G  C+P  V+Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   ++ A++   +M D ++  + V  +++ R  C A    +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K++ A  L E M    V P+ F Y  L+D FC  G + +A++ 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P VVTY  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEALE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   + +  CE +   Y  LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D ++D A  +   M     AP+ + +  ++ G  +  +T +   L+  M+E+
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 36/430 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    +++++  C PNV+TY  L+ G  R         +   MI         C P   
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG------CYPSRR 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
           I+ ++I   C+ G    A +LL +M D    P  V YN +I G C     NE        
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC----GNEKLPSLDVL 426

Query: 114 --AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A++ + EM+D  V  N V  S +   LC  GK E+A  ++  M+  G  P+   Y+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +   C   +V+ A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTY  L     +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 292 LFRTLR----ILKCEL------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           ++  +R    I   ++            +I +Y  L+DGLCK+ ++K A +L   +    
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              + + Y+ +I   C  GK+D+A  +F  M  +G  P+   +++L+    ++      +
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 396 ELLHRMDERN 405
           ++L RM E +
Sbjct: 727 KVLSRMLENS 736



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 50/420 (11%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII--------------- 67
           + LI   CR G   VAL    E +    + G   KP  + Y  ++               
Sbjct: 201 NVLIRKCCRNGLWNVAL----EELGRLKDLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 68  -----------DG---------LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                      DG         LCK G   + +E L  ++ +    D V Y  +I G C 
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCE 311

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A+   EA      M      PNVVT+ +++    +  ++    ++L +MI  G  P+  +
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE------IEGALS 221
           +N+L+  +C +G  + A +L   M   GC+     Y+ILI G C N++      +E A  
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            Y EML   +    V  + L   L    + E+A+ +  EM   G   DT  Y   I  LC
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
               +  A  LF  ++      D+ +Y+ LID  CK G L+ A + F  + R     +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY  +IHA     KM  A++LF  M ++G  P+ V +  L+ G  ++ +  K  ++  RM
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 16/331 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDA 60
           EA  L   +   GCEPN I Y  LI+G C+ G    A  +F +M   G G       P+ 
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG-------PNV 706

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++ID L K+  +D A ++L +M + +  P+V+ Y  +I G C    ++EA RL   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PNVVT++ ++D   K GK+++  +L+  M   G  PN   Y  L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +L   M+      ++  Y  +I G+  N+E   +L L  E+      P +  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 241 LFIGLFEIHQVERAFKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-- 296
           L     +  ++E A +L  EM       AAD   Y + I+ L     + +A EL+  +  
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           R    EL I  Y  L+ GL +  R + A +L
Sbjct: 945 RGGIPELSIFFY--LVKGLIRINRWEEALQL 973



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 155/396 (39%), Gaps = 71/396 (17%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR------------ 103
           C  DAV+ + +I     +GF  K ++ L Q ++K     VV   S+++            
Sbjct: 94  CSNDAVLISDVIRNT-GDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWA 152

Query: 104 ----GF---------------CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
               G+               C  ND    ++   E+ D+  +      +V++ + C+NG
Sbjct: 153 GRQIGYGHTGPVYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNG 211

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTL--------------------------MDGFC-- 176
               A + L  +  +G +P+   YN L                          MDG+   
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 177 ----LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
               L  +  R +E    +E    K +   Y+ +I+G C+    E A+   S M S    
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTY  L  G     Q+ R  ++   M   G       + + I   C++G    A +L
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGR------LKIAWELFHSLPRGVLIADVVTYNIM 346
            + +    C+     Y+ LI G+C + +      L++A + +  +    ++ + V  + +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              LC  GK +KA+ +  +M +KG  PD   ++ ++
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 15/252 (5%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP+ +TYN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
               F+  LCK G   EAL L         +LD   Y+ +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                I +VVTY I++       ++ +   +   M  +G  P    FN+L+    R+ + 
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 392 SKVVELLHRMDE 403
           S   +LL +M +
Sbjct: 386 SYAYKLLKKMGD 397


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 197/364 (54%), Gaps = 6/364 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +L +  C+P VITY+ LI      G    AL L +EM++         KPD   
Sbjct: 208 ALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFT 261

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G+CKEG VD+A E++  ++ K   PDV++YN ++R         E ++L  +M 
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PNVVT+S+++  LC++GK+EEA  LL+LM + G+ P+A+ Y+ L+  FC  GR++
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E   +M S GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P   +YNT+F
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 441

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L+      RA  +  EM  +G+  D   Y + I  LC+ G + +A EL   +R  +  
Sbjct: 442 SALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFH 501

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ ++ G CK+ R++ A ++  S+       +  TY ++I  +   G   +A +L
Sbjct: 502 PSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561

Query: 363 FLDM 366
             D+
Sbjct: 562 ANDL 565



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 206/401 (51%), Gaps = 7/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E+  L   +   G  P+VI  + LI G     +   A+ + E +     +FG   +PD 
Sbjct: 102 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEIL----EKFG---QPDV 154

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+G CK   +D A  +L +M+ K+ +PD VTYN +I   C     + A ++  +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++    QP V+T++++++     G ++EA +LL+ M+  G++P+ F YNT++ G C  G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+RA E+  ++E  GC+ +V SY+IL+       + E    L ++M S+   P VVTY+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L    ++E A  L   M+  G+  D ++Y   I   C+ G +  A+E   T+    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  DI +Y+ ++  LCK+G+   A E+F  L       +  +YN M  AL + G   +A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + L+M + G+ PD + +N+++    R     K  ELL  M
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 177/333 (53%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G   ++  LL  M  K  NPDV+    +I+GF    +  +A R+ +E++++  QP+V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV-MEILEKFGQPDV 154

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++ +++  CK  ++++A+++L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KP + TYNT+  G+ +   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+RAF++   ++  G   D  +Y   +  L   G   E  +L   +   KC+ ++ +YS 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G+++ A  L   +    L  D  +Y+ +I A C +G++D A +    M + G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD V +NT++    +N +  + +E+  ++ E
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 139/301 (46%), Gaps = 36/301 (11%)

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I    C++G   E+  LLE M++ G  P+  +   L+ GF     V +A  +   +E  G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF----------IGL 245
            + +VF+Y+ LING+CK   I+ A  +   M SK   P  VTYN +           + L
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 246 FEIHQ-------------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + Q                         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK G +  A E+ R L +  CE D+ SY+ L+  L   G+ +   +L   +       +V
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTY+I+I  LC DGK+++A +L   M+ KG+ PD  +++ L+    R       +E L  
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 401 M 401
           M
Sbjct: 390 M 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 7/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F KL   GC PN  +Y+T+ + L  +G  I AL++  EM++ NG       PD +
Sbjct: 417 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVS-NG-----IDPDEI 470

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I  LC+EG VDKA ELL+ M+    +P VVTYN V+ GFC A+   +A  +   M
Sbjct: 471 TYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSM 530

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PN  T++V+++ +   G   EA +L   +++I    + + +  L   F L   +
Sbjct: 531 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA-ISEYSFKRLHRTFPLLNVL 589

Query: 182 NRAKELF 188
            R+ + F
Sbjct: 590 QRSSQTF 596



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++ + G +P+ ITY+++I+ LCR G    A  L  +M   + EF     P  
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM--RSCEF----HPSV 504

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           V Y  ++ G CK   ++ A ++L  M      P+  TY  +I G  +A    EA  L
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 220/435 (50%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F  +   GC P V+T++T+IN  C+ G+ + A  LF+    G  E G    P+A+
Sbjct: 319 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFD----GLKEMGF--SPNAI 372

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------- 104
           +Y T+++G  K   +D+A  L  +M+ K I PD +T+N ++ G                 
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 105 ------------------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                              C+A   +EA    ++M+++G+ P+++ F+ ++    + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +  +LM+  G+ P+    ++L+ G  + GR+  A EL   M   G   N  ++++L
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++ + K  ++ GA SL+ EM  +GI P VV ++    GL +   VE A+ +F EM R G+
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +AY + I G CK G + EAL+L + +R      DI + + +I GLCK GR++ A  
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F  + +  L  D++TYN +I+  C    M  A +L   M A G  PD   +N  + G  
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 732

Query: 387 RNNETSKVVELLHRM 401
            +   ++ V +L  +
Sbjct: 733 SSRRMNRAVLMLDEL 747



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 218/434 (50%), Gaps = 45/434 (10%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L   +  F CEPN   Y+ +IN  C  G T  AL  F  MI    E G  C P  V + 
Sbjct: 287 SLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI----ERG--CNPTVVTFN 340

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+  CKEG V +A++L   +K+   +P+ + YN+++ G+    + ++A  L+ EM  +
Sbjct: 341 TVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKK 400

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ P+ +TF++++    K G+ E+  +LL+ +  +G+ P+  +++  + G C  GR++ A
Sbjct: 401 GIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEA 460

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E  + M   G   ++ +++ +I  Y +    + A   Y  M+  G+ P+  T ++L +G
Sbjct: 461 MEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMG 520

Query: 245 L-----------------------------------FEIHQVERAFKLFDEMQRHGVAAD 269
           L                                   F+   V  A  L+ EM+R G+  D
Sbjct: 521 LSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPD 580

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWEL 327
             A+  FIDGL K G + EA  +F  L +L+  L  +  +Y+ LI G CK G+L  A +L
Sbjct: 581 VVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +    L+ D+ T N++I  LC  G+M  A ++F+DM   G++PD + +NTL+ G  +
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 698

Query: 388 NNETSKVVELLHRM 401
             +      L++RM
Sbjct: 699 AFDMVNADNLVNRM 712



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 65/467 (13%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM--------------- 45
           +EA  LF  LK  G  PN I Y+TL+NG  +      A  L+EEM               
Sbjct: 353 VEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNIL 412

Query: 46  INGNGEFG--------------VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           ++G+ ++G              +   PD  ++   + GLC  G +D+A E L+ M +K +
Sbjct: 413 VSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL 472

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P ++ +NSVI  +  A   ++A   +  M+  G+ P+  T S ++  L  NG+++EA++
Sbjct: 473 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L+  MI+ G+  N   +  L+D F   G V  A+ L+  ME  G   +V ++S  I+G  
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +E A +++ EML KG+ P    YN+L  G  +  ++  A KL   M+  G+  D +
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK-------------- 317
                I GLCK G +  A+ +F  +       DI +Y+ LI+G CK              
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712

Query: 318 ---------------------SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                                S R+  A  +   L    ++ + VTYN M++ +C+D  +
Sbjct: 713 YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-IL 771

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D+A  L   +      P+ V  N L+    +     + +   H++ E
Sbjct: 772 DRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSE 818



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 201/399 (50%), Gaps = 10/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G +P   T+S +I G CR G     ++L E +++   +F   C+P+A  Y  
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKG----CIHLGESLLHLMPKFH--CEPNAFAYNI 306

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+  C  G    A      M ++  NP VVT+N+VI  FC   +  EA++LF  + + G
Sbjct: 307 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 366

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN + ++ +M+   K  ++++A+ L E M + G+ P+   +N L+ G    GR     
Sbjct: 367 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   +  +G   +   + I ++G C    ++ A+    +ML KG+ P+++ +N++    
Sbjct: 427 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 486

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +    ++AF+ +  M   G+        + + GL  NG + EA EL   +      ++ 
Sbjct: 487 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 546

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ L+D   K G +  A  L+  + R  +  DVV ++  I  L   G +++A+++FL+
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606

Query: 366 MEAKGVAPDCVAFNTLMLG---CIRNNETSKVVELL-HR 400
           M  KG+ P+  A+N+L+ G   C + NE  K+ +++ HR
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHR 645



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 164/345 (47%), Gaps = 6/345 (1%)

Query: 65  TIIDGLCKEGFVD-----KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +++D L +  FV+     +A E+L +M++  + P       + +      D     +LF 
Sbjct: 197 SVLDSLMR-AFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFK 255

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ +G QP   TFS I+   C+ G +     LL LM +    PNAF YN +++  C+ G
Sbjct: 256 DVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG 315

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R + A   F  M   GC   V +++ +IN +CK   +  A  L+  +   G  P  + YN
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G  ++ ++++A  L++EM++ G+A D   +   + G  K G   +   L + + +L
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   +   + GLC +GRL  A E    +    L   ++ +N +I A    G  DKA
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +  M   G+ P     ++L++G   N    +  EL+ +M E+
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 540



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 2/361 (0%)

Query: 44  EMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
           E++    E GV  +P A     +   L + G      +L   +  +   P   T++ +I 
Sbjct: 217 EILGRMREVGV--RPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GFC     +  + L   M     +PN   ++++++  C  G+  +A     LMI+ G  P
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 334

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
               +NT+++ FC  G V  A++LF  ++ MG   N   Y+ L+NGY K +EI+ A  LY
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM  KGI P  +T+N L  G ++  + E   +L  ++   G+  D   +   + GLC  
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + EA+E    +        I +++ +I    ++G    A+E +  +    L     T 
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 514

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++  L  +G++ +A +L   M  KG++ + +AF  L+    +  +      L   M+ 
Sbjct: 515 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574

Query: 404 R 404
           R
Sbjct: 575 R 575



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 146/289 (50%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D    +S++R F  A    +A  +   M + GV+P+    +++   L + G      +L 
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +I+ G +P  + ++ ++ GFC  G ++  + L   M    C+ N F+Y+I+IN  C  
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                AL+ ++ M+ +G  PTVVT+NT+     +   V  A KLFD ++  G + +   Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            T ++G  K   I +A  L+  +R      D  +++ L+ G  K GR +    L   +  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             L+ D   ++I +  LC  G++D+A +  +DM  KG++P  +AFN+++
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 483


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 201/402 (50%), Gaps = 5/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   + A G EP++ TY+ L  GLC+ G    A  L +EM       G +  PD V
Sbjct: 292 QATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM----ERLGTLL-PDVV 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ D   K      A  LL +M++K +   +VT+N VI+G C   +   A     +M
Sbjct: 347 TYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKM 406

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+V+T++ ++   CK G + +A  L++ M++ G++ + F  NT++   C   R 
Sbjct: 407 ADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRY 466

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L  S    G   +  SY  ++  Y K    E AL L+ EM+ K + P++ TYNTL
Sbjct: 467 EEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +++ A    +E+   G+  D   Y   I   CK G +  A +    +     
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSF 586

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ + + L++GLC +G+L  A +LF S        DV+TYN +I  +C DG +D A  
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALH 646

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            F DMEA+G+ PD   +N ++        T +   +LH++ E
Sbjct: 647 FFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 208/435 (47%), Gaps = 44/435 (10%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  + A    PN  T++ L++  C  G    AL+    M      FG+   PDAV Y T+
Sbjct: 192 FRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG----FGL--SPDAVTYNTL 245

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           ++  C++G + +A+ LL +MK   + P   TYN+++  +       +A ++   M   G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNR-A 184
           +P++ T++V+   LC+ GK++EA +L + M ++G + P+   YNTL D  C   R +  A
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADA-CFKCRCSSDA 364

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M   G K  + +++I+I G CK+ E+EGAL   ++M   G+ P V+TYNTL   
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT--------- 295
             +   + +A+ L DEM R G+  DT+   T +  LCK     EA  L ++         
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 296 --------------------LRIL------KCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
                               LR+       K    I +Y+ LI GL + GRLK A +  +
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            L    L+ D  TYNI+IHA C +G ++ A      M      PD V  NTLM G   N 
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604

Query: 390 ETSKVVELLHRMDER 404
           +  K ++L     E+
Sbjct: 605 KLDKALKLFESWVEK 619



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 197/404 (48%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++K  G  P   TY+TL++   R G    A  + E M   NG      +PD  
Sbjct: 257 EARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAM-TANG-----FEPDLW 310

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +  GLC+ G VD+A  L  +M+    + PDVVTYN++         S++A RL  E
Sbjct: 311 TYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEE 370

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++GV+  +VT ++++  LCK+G++E A   L  M   G+ P+   YNTL+   C  G 
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A  L   M   G K + F+ + ++   CK K  E A  L      +G  P  V+Y T
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +    F+ +  E A +L+DEM    +      Y T I GL + G + EA++    L    
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ +I   CK G L+ A++  + +       DVVT N +++ LC +GK+DKA 
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            LF     KG   D + +NTL+    ++ +    +     M+ R
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 182/387 (47%), Gaps = 47/387 (12%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV---------VCK 57
             K+   G  P+VITY+TLI+  C+ G+   A  L +EM+    +            +CK
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 58  --------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
                               PD V Y T++    KE   + A  L  +M +K + P + T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           YN++I+G        EA     E+M++G+ P+  T+++I+   CK G +E A Q    M+
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +   +P+    NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK+ +++
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL  +++M ++G++P   TYN +   L E  + E A  +  ++   G  +     ++F 
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLS-----QSFS 697

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDI---------RSYSCLIDGLCKSGRLKIAWELF 328
             L K   + EA     + +  K E +           +Y+ L++GLC SG+ K A  + 
Sbjct: 698 SPLLKPSSVDEA----ESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAIL 753

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGK 355
             + +  +  D  TY  ++  L    K
Sbjct: 754 DEMMQKGMSVDSSTYITLMEGLVKRQK 780



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 158/330 (47%), Gaps = 4/330 (1%)

Query: 79  AKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRL--FIEMMDQGVQPNVVTFSV 135
           A +LL  ++ +  + P +   N+V+     +  ++    L  F  ++   + PN  TF++
Sbjct: 150 AAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNL 209

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C  G + +A   L  M   G+ P+A  YNTL++  C  G +  A+ L   M+  G
Sbjct: 210 LVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
                 +Y+ L++ Y +   I+ A  +   M + G +P + TYN L  GL +  +V+ AF
Sbjct: 270 VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329

Query: 256 KLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           +L DEM+R G +  D   Y T  D   K     +AL L   +R    +  + +++ +I G
Sbjct: 330 RLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKG 389

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G L+ A    + +    L  DV+TYN +IHA C  G + KA+ L  +M  +G+  D
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               NT++    +     +   LL    +R
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQR 479



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 41/179 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF      G + +VITY+TLI  +C+ G    AL+ F +M    G      +PDA 
Sbjct: 608 KALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM-EARG-----LQPDAF 661

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM--------------------------KDKNINPDV 95
            Y  ++  L + G  ++A+ +L ++                          KD     + 
Sbjct: 662 TYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEET 721

Query: 96  V---------TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           V          Y  ++ G C +    EAK +  EMM +G+  +  T+  +M+ L K  K
Sbjct: 722 VENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 220/435 (50%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F  +   GC P V+T++T+IN  C+ G+ + A  LF+    G  E G    P+A+
Sbjct: 109 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFD----GLKEMGF--SPNAI 162

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------- 104
           +Y T+++G  K   +D+A  L  +M+ K I PD +T+N ++ G                 
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222

Query: 105 ------------------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                              C+A   +EA    ++M+++G+ P+++ F+ ++    + G  
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           ++A +  +LM+  G+ P+    ++L+ G  + GR+  A EL   M   G   N  ++++L
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++ + K  ++ GA SL+ EM  +GI P VV ++    GL +   VE A+ +F EM R G+
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +AY + I G CK G + EAL+L + +R      DI + + +I GLCK GR++ A  
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F  + +  L  D++TYN +I+  C    M  A +L   M A G  PD   +N  + G  
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522

Query: 387 RNNETSKVVELLHRM 401
            +   ++ V +L  +
Sbjct: 523 SSRRMNRAVLMLDEL 537



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 213/432 (49%), Gaps = 41/432 (9%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L   +  F CEPN   Y+ +IN  C  G T  AL  F  MI    E G  C P  V + 
Sbjct: 77  SLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI----ERG--CNPTVVTFN 130

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+  CKEG V +A++L   +K+   +P+ + YN+++ G+    + ++A  L+ EM  +
Sbjct: 131 TVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKK 190

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ P+ +TF++++    K G+ E+  +LL+ +  +G+ P+  +++  + G C  GR++ A
Sbjct: 191 GIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEA 250

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E  + M   G   ++ +++ +I  Y +    + A   Y  M+  G+ P+  T ++L +G
Sbjct: 251 MEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMG 310

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    +++ A +L  +M   G++ +  A+   +D   K G +V A  L+  +       D
Sbjct: 311 LSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPD 370

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI--------------------------- 337
           + ++S  IDGL K G ++ A+ +F  + R  LI                           
Sbjct: 371 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 430

Query: 338 --------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
                    D+ T N++I  LC  G+M  A ++F+DM   G++PD + +NTL+ G  +  
Sbjct: 431 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 490

Query: 390 ETSKVVELLHRM 401
           +      L++RM
Sbjct: 491 DMVNADNLVNRM 502



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 201/399 (50%), Gaps = 10/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G +P   T+S +I G CR G     ++L E +++   +F   C+P+A  Y  
Sbjct: 43  LFKDVIRRGPQPCKYTFSGIILGFCRKG----CIHLGESLLHLMPKFH--CEPNAFAYNI 96

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+  C  G    A      M ++  NP VVT+N+VI  FC   +  EA++LF  + + G
Sbjct: 97  VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 156

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN + ++ +M+   K  ++++A+ L E M + G+ P+   +N L+ G    GR     
Sbjct: 157 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 216

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   +  +G   +   + I ++G C    ++ A+    +ML KG+ P+++ +N++    
Sbjct: 217 RLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAY 276

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +    ++AF+ +  M   G+        + + GL  NG + EA EL   +      ++ 
Sbjct: 277 SQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNN 336

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ L+D   K G +  A  L+  + R  +  DVV ++  I  L   G +++A+++FL+
Sbjct: 337 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 396

Query: 366 MEAKGVAPDCVAFNTLMLG---CIRNNETSKVVELL-HR 400
           M  KG+ P+  A+N+L+ G   C + NE  K+ +++ HR
Sbjct: 397 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHR 435



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 155/327 (47%)

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A E+L +M++  + P       + +      D     +LF +++ +G QP   TFS I+
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
              C+ G +     LL LM +    PNAF YN +++  C+ GR + A   F  M   GC 
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             V +++ +IN +CK   +  A  L+  +   G  P  + YNTL  G  ++ ++++A  L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           ++EM++ G+A D   +   + G  K G   +   L + + +L    D   +   + GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +GRL  A E    +    L   ++ +N +I A    G  DKA + +  M   G+ P    
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
            ++L++G   N    +  EL+ +M E+
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEK 330



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 2/354 (0%)

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           E GV  +P A     +   L + G      +L   +  +   P   T++ +I GFC    
Sbjct: 14  EVGV--RPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 71

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            +  + L   M     +PN   ++++++  C  G+  +A     LMI+ G  P    +NT
Sbjct: 72  IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 131

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++ FC  G V  A++LF  ++ MG   N   Y+ L+NGY K +EI+ A  LY EM  KG
Sbjct: 132 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG 191

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           I P  +T+N L  G ++  + E   +L  ++   G+  D   +   + GLC  G + EA+
Sbjct: 192 IAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAM 251

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           E    +        I +++ +I    ++G    A+E +  +    L     T + ++  L
Sbjct: 252 EFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGL 311

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +G++ +A +L   M  KG++ + +AF  L+    +  +      L   M+ R
Sbjct: 312 SINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 6/273 (2%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG  P+  T S+L+ GL   G    A  L  +MI    E G+    + + +T ++D   K
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI----EKGLSV--NNMAFTVLLDKFFK 348

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G V  A+ L  +M+ + I PDVV +++ I G        EA  +F+EM+ +G+ PN   
Sbjct: 349 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA 408

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++   CK GK+ EA +L ++M   G+ P+ F  N ++ G C  GR+  A  +F+ M 
Sbjct: 409 YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LINGYCK  ++  A +L + M + G  P + TYN    G     ++ 
Sbjct: 469 QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMN 528

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           RA  + DE+   G+ + ++A    ++   K+ Y
Sbjct: 529 RAVLMLDELVSAGILSFSFACPPTLNAHTKHFY 561


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 201/403 (49%), Gaps = 41/403 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+T++ LI+   R G    A+ L + M N         KP  V + +++ GLCK    
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRF 243

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DKAKE+   M   ++ PDV ++N +I GFC   +  EA + + EM  +GV P+VV+FS +
Sbjct: 244 DKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL 303

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +      GKM+ A+  L  M  +G+ P+  +Y  ++ GFC  G ++ A  +   M  +GC
Sbjct: 304 IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC 363

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK   +  A  L +EM  +G+ P + T+ TL  G       E+A +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR------------TLRIL---KC 301
           LFD +    +  D  AY + IDG+C+ G + +A EL+             T  IL    C
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483

Query: 302 E--------------------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           E                     +I +Y+ +I G C+SG +K   +    + +  ++ D++
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           T+N +IH    +  M  A ++F  ME + V PD V +N ++ G
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 195/348 (56%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD V +  +ID   + G VD A  L+  M +K + P +VT+NSV++G C     ++AK +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M    V P+V +F++++   C+ G++EEA +  + M Q GV P+   ++ L+  F  
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+++ A      M+ +G   +   Y+++I G+C+   +  AL +  EM+  G  P VVT
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNTL  GL + H++  A +L +EM+  GV  D   + T I G C++G   +AL+LF TL 
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D+ +Y+ LIDG+C+ G L  A EL+  +    +  + VTY+I+I + C  G+++
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +A     +M +KG  P+ + +N+++ G  R+    K  + L +M + N
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 207/403 (51%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +      P+V +++ LI G CR G    A+  ++EM     + GV   PD V
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEM----QQRGVT--PDVV 298

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I      G +D A   L +MK   + PD V Y  VI GFC A   +EA R+  EM
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++ +++ LCK  ++ +A +LL  M + GV P+   + TL+ G+C  G  
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF 418

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +LF ++     + +V +Y+ LI+G C+  ++  A  L+ +M ++ I P  VTY+ L
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  QVE AF   DEM   G   +   Y + I G C++G + +  +  + +     
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNI 538

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +++ LI G  K   +  A+ +F+ + + ++  D VTYN++I+     G M++A  
Sbjct: 539 LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGR 598

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M A G+ PD   + +L+ G +    + +  +L   M  R
Sbjct: 599 VFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHR 641



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 188/373 (50%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +++  G  P+V+++S LI      G    A     EM       G+   PD V
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK------GLGLVPDGV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C+ G + +A  +  +M      PDVVTYN+++ G C  +   +A+ L  EM
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV P++ TF+ ++   C++G  E+A QL + ++   +RP+   YN+L+DG C  G +
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL+  M +     N  +YSILI+ +C+  ++E A     EM+SKG  P ++TYN++
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V++  +   +M +  +  D   + T I G  K   +  A  +F  +     
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ +I+G  + G ++ A  +F  +    +  D  TY  +I+     G   +A  
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633

Query: 362 LFLDMEAKGVAPD 374
           L  +M  +G APD
Sbjct: 634 LHDEMMHRGFAPD 646



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 180/331 (54%), Gaps = 5/331 (1%)

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
             ++A  L+L   D  +N    T N ++  +C + + ++A  +  EM  + V P+VVT +
Sbjct: 140 LAEEAYRLVLS-SDSEVN--AYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHN 196

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           V++D   + G ++ A  L++ M   G++P    +N+++ G C   R ++AKE+F +M+  
Sbjct: 197 VLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQC 256

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVER 253
               +V S++ILI G+C+  E+E A+  Y EM  +G+ P VV+++ L IGLF    +++ 
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL-IGLFSTRGKMDH 315

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A     EM+  G+  D   Y   I G C+ G + EAL +   +  L C  D+ +Y+ L++
Sbjct: 316 AAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLN 375

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK  RL  A EL + +    +  D+ T+  +IH  C DG  +KA  LF  +  + + P
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D VA+N+L+ G  R  + +K  EL   M  R
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 149/269 (55%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  ++K  G  P++ T++TLI+G CR G+   AL LF+ +++         +PD 
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR------LRPDV 437

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++IDG+C++G + KA EL   M  + I P+ VTY+ +I   C      EA     E
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDE 497

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PN++T++ I+   C++G +++  Q L+ M+Q  + P+   +NTL+ G+     
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  ME    + +  +Y+++ING+ +   +E A  ++ +M + GI+P   TY +
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L  G       + AF+L DEM   G A D
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 157/325 (48%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +E++  +   +  P    ++ +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G    A +   L++      NA+  N ++  +C +   ++A  +   ME      +
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+   +  +++ A++L   M +KG+KP +VT+N++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M +  VA D  ++   I G C+ G + EA++ ++ ++      D+ S+SCLI      G
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           ++  A      +    L+ D V Y ++I   C  G M +A  +  +M   G  PD V +N
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  + +      ELL+ M ER
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKER 396


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 199/383 (51%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  GCEPNV TY+ LI+GLC +G   VA+ LF  M + +G F     P+ V
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM-SRDGVF-----PNTV 561

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+ L +   +  A  +L  M    +  ++VTYN +I+G+C   D  +A  +   M
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+VT++ I+   C +G    A ++L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P V TYN L
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    ALE+F  +    C
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A +
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFN 861

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
               M   G  P    +  L+ G
Sbjct: 862 FLGRMIKAGCQPTLWTYGVLIKG 884



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   GCEPN +TYSTLINGLC +G    A +L  EMI      G++  P A 
Sbjct: 438 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T  I  LC  G  + A  L + MK+K   P+V TY ++I G C +     A  LF  M
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN VT++ +++ L +N +++ A  +L LM + G+  N   YN ++ G+C+ G  
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KP   +Y  L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++   C
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 302 ELDIRSYSCL-----------------------------------IDGLCKSGRLKIAWE 326
             ++++Y+ L                                   IDGLCK+G   +A E
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +F+ +     + +++TY+ +I AL  +GK+++A +LF ++E  G+ PD + +  ++   I
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 387 RNNETSKVVELLHRM 401
            + +       L RM
Sbjct: 852 MSGKVEHAFNFLGRM 866



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 209/429 (48%), Gaps = 41/429 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L   G    +  YS L+  L R G T   ++ +  M++     GV  +P+ +IY  +I+ 
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINA 394

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK+G V  A+ ++ ++ +  ++PD  TY S+I G C  +D + A ++F +M  +G +PN
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT+S +++ LC +G++ EA  L+  MI  G+ P A      +   C  G    A  LFV
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M++ GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P  VTYN L   L E  
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 574

Query: 250 QVERAFKLFDEMQRHGV-----------------------------------AADTWAYR 274
           +++ AF + + M R+G+                                   +A+   Y 
Sbjct: 575 RIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 634

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I G C +G    AL +   +R   C+ D  SY+ LI G CK  +++ A+ LF+ +   
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L  + VTY  +I   C D K+D A  L   M+  G  P+   +N L+ G  + N  S  
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754

Query: 395 VELLHRMDE 403
            EL   M E
Sbjct: 755 EELCKVMIE 763



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 192/389 (49%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+  TY+++I G CR      AL +F +M          C+P+ V Y+T+I+GLC  G 
Sbjct: 417 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG------CEPNTVTYSTLINGLCDSGR 470

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V++A +L+ +M    I P   T    I   C      +A RLF++M ++G +PNV T++ 
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC +G ++ A  L   M + GV PN   YN L++      R+  A  +   M   G
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N+ +Y+ +I GYC   + + A+ + + ML +G    +VTYNT+  G  +      A 
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ D M+  G   D W+Y   I G CK   +  A  LF  +       +  +Y+ LIDG 
Sbjct: 651 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK  +L  A  L   + R     +V TYN++IH L        A +L   M  +G+ P+ 
Sbjct: 711 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 770

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V +  ++ G  +N  TS  +E+ ++M E+
Sbjct: 771 VTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 181/420 (43%), Gaps = 65/420 (15%)

Query: 14   GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
            GC+P+  +Y+ LI G C+      A  LF EM++       +C P+ V YT +IDG CK+
Sbjct: 660  GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKD 713

Query: 74   GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
              +D A  LL  MK     P+V TYN +I G    N+ + A+ L   M+++G+ PNVVT+
Sbjct: 714  EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 773

Query: 134  SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            + ++D LCKNG    A ++   MI+ G  PN   Y++L+      G+V  A+ LF  +E 
Sbjct: 774  TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 833

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK------- 232
             G   +  +Y  +I  Y  + ++E A +    M+               KG+K       
Sbjct: 834  HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893

Query: 233  ------PTVVT-----YNT--------LFIGLFEIH-----QVERAF------------- 255
                  P VV      Y T        +   L E+      QV+ A              
Sbjct: 894  QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 953

Query: 256  -KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             +L   M   G+  D  AY + +  L +   +  A+ +F+ +    CE+ +  Y  LI  
Sbjct: 954  NELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICA 1013

Query: 315  LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +   P 
Sbjct: 1014 LCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPS 1073



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 1/300 (0%)

Query: 106 CYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           C++ ++      F++M+ Q G++  +  +S ++  L + G           M+  GV+PN
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  A+ +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P  VTY+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              +A  LF  ++   CE ++ +Y+ LI GLC SG LK+A  LFH + R  +  + VTYN
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I+ L  + ++  A  +   M   G+  + V +N ++ G     +  K + +++ M +R
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 53/266 (19%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVVC 56
            EA  LF +L+  G  P+ ITY  +I     +G    A N    MI    +     +GV+ 
Sbjct: 823  EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882

Query: 57   K----------------PDAV--------------------------------IYTTIID 68
            K                PD V                                +   ++ 
Sbjct: 883  KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 942

Query: 69   GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
             L   G   +A ELL  M  + + PD   YNS++       + + A  +F  M  QG + 
Sbjct: 943  NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 1002

Query: 129  NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            ++  +  ++  LC+  + +EA    E M+     P+  V   L+DG    G  +   E  
Sbjct: 1003 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 1062

Query: 189  VSMESMGCKHNVFSYSILINGYCKNK 214
              ME+     +   Y+IL     K +
Sbjct: 1063 HIMETRRYMPSFHIYTILAREASKKR 1088


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 207/402 (51%), Gaps = 16/402 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------- 52
           A  LF  + + GC PNV+TY+ LI+G C++G    A  ++  M  GN +           
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKID 627

Query: 53  -GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G +  P+   Y  ++DGLCK   V +A++LL  M  +   P+ + Y+++I GFC     
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M ++G  PNV T+S ++D L K+ +++ A ++L  M++    PN  +Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG 
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A +L DEM++         YR  I+G   N   + +L 
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLG 865

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIHA 349
           L   +        I +Y  LID  CK+GRL++A EL   +        AD   Y+ +I +
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIES 925

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           L    K+DKA +L+ DM  +G  P+   F  L+ G IR N T
Sbjct: 926 LSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 201/419 (47%), Gaps = 18/419 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAV 61
           A  L  K+   GC+P  + Y+ LI G+C     + +L++ E      GE        + V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +   LC  G  +KA  ++ +M  K   PD  TY+ VI   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V T+++++D  CK G +++A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M               
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 231 -----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                  P + TY  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA  +F  +       ++ +YS LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G  +  +  K +EL+ +M  +
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 28/413 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+   +++LI+  CR+G    A  L ++M    G+ G  C+P  V+Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   ++ A++   +M D ++  + V  +++ R  C A    +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K++ A  L E M    V P+ F Y  L+D FC  G + +A++ 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P VVTY  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEALE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   + +  CE +   Y  LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            D ++D A  +   M     AP+ + +  ++ G  +  +T +   L+  M+E+
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 200/430 (46%), Gaps = 36/430 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    +++++  C PNV+TY  L+ G  R         +   MI         C P   
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG------CYPSRR 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
           I+ ++I   C+ G    A +LL +M D    P  V YN +I G C     NE        
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC----GNEKLPSLDVL 426

Query: 114 --AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A++ + EM+D  V  N V  S +   LC  GK E+A  ++  M+  G  P+   Y+ +
Sbjct: 427 ELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKV 486

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +   C   +V+ A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G 
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTY  L     +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +
Sbjct: 547 APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQ 606

Query: 292 LFRTLR----ILKCEL------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           ++  +R    I   ++            +I +Y  L+DGLCK+ ++K A +L   +    
Sbjct: 607 IYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEG 666

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              + + Y+ +I   C  GK+D+A  +F  M  +G  P+   +++L+    ++      +
Sbjct: 667 CEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLAL 726

Query: 396 ELLHRMDERN 405
           ++L RM E +
Sbjct: 727 KVLSRMLENS 736



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 50/420 (11%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII--------------- 67
           + LI   CR G   VAL    E +    + G   KP  + Y  ++               
Sbjct: 201 NVLIRKCCRNGLWNVAL----EELGRLKDLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 68  -----------DG---------LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                      DG         LCK G   + +E L  ++ +    D V Y  +I G C 
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCE 311

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A+   EA      M      PNVVT+ +++    +  ++    ++L +MI  G  P+  +
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE------IEGALS 221
           +N+L+  +C +G  + A +L   M   GC+     Y+ILI G C N++      +E A  
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            Y EML   +    V  + L   L    + E+A+ +  EM   G   DT  Y   I  LC
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
               +  A  LF  ++      D+ +Y+ LID  CK G L+ A + F  + R     +VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           TY  +IHA     KM  A++LF  M ++G  P+ V +  L+ G  ++ +  K  ++  RM
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 142/295 (48%), Gaps = 12/295 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDA 60
           EA  L   +   GCEPN I Y  LI+G C+ G    A  +F +M   G G       P+ 
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG-------PNV 706

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++ID L K+  +D A ++L +M + +  P+V+ Y  +I G C    ++EA RL   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PNVVT++ ++D   K GK+++  +L+  M   G  PN   Y  L++  C  G 
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +L   M+      ++  Y  +I G+  N+E   +L L  E+      P +  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 241 LFIGLFEIHQVERAFKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           L     +  ++E A +L   M       AAD   Y + I+ L     + +A EL+
Sbjct: 885 LIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELY 939



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 155/396 (39%), Gaps = 71/396 (17%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR------------ 103
           C  DAV+ + +I     +GF  K ++ L Q ++K     VV   S+++            
Sbjct: 94  CSNDAVLISDVIRNT-GDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWA 152

Query: 104 ----GF---------------CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
               G+               C  ND    ++   E+ D+  +      +V++ + C+NG
Sbjct: 153 GRQIGYGHTGPVYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNG 211

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTL--------------------------MDGFC-- 176
               A + L  +  +G +P+   YN L                          MDG+   
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 177 ----LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
               L  +  R +E    +E    K +   Y+ +I+G C+    E A+   S M S    
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTY  L  G     Q+ R  ++   M   G       + + I   C++G    A +L
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGR------LKIAWELFHSLPRGVLIADVVTYNIM 346
            + +    C+     Y+ LI G+C + +      L++A + +  +    ++ + V  + +
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              LC  GK +KA+ +  +M +KG  PD   ++ ++
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 15/252 (5%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP+ +TYN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
               F+  LCK G   EAL L         +LD   Y+ +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                I +VVTY I++       ++ +   +   M  +G  P    FN+L+    R+ + 
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 392 SKVVELLHRMDE 403
           S   +LL +M +
Sbjct: 386 SYAYKLLKKMGD 397


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 14/369 (3%)

Query: 41  LFEEMINGNG------------EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD 88
           L ++MIN N             E+G    P    Y  +I+  CKEG +  AK +  +++ 
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGF--PPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           + + P  V++N++I G C + + +E  RL   M +  + P+V T+SV++  LCK G+++ 
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A QL + M Q G+RPN   +  L+DG C + R++ A   +  M +MG K ++  Y+ L+N
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK  ++  A  L  EM   G+KP  +TY TL  G  +   +E A ++   M   GV  
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D  A+   I G C++G + +A    R +     + D  +Y+ +IDG CK G +K+ ++L 
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +        V+TYN++++ LC  G+M  A+ L   M   GV PD + +N L+ G  +N
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551

Query: 389 NETSKVVEL 397
            +   +++L
Sbjct: 552 GKAEDLLKL 560



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 9/378 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
             ++++  +G  P V  Y+ LIN  C+ G    A  +F E I   G      +P  V + 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE-IRKRG-----LRPTTVSFN 262

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLCK   +D+   L   M++  I PDV TY+ +I G C     + A++LF EM  +
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PN +TF+ ++D  C++ +++ A      M+ +GV+P+  +YNTL++G C  G VN+A
Sbjct: 323 GLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++L   M  +G K +  +Y+ LI+GYCK  ++E A+ +   M  +G+    V +  L  G
Sbjct: 383 RKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISG 442

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V  A +   EM   G+  D   Y   IDG CK G +    +L + ++I   +  
Sbjct: 443 FCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L++GLCK G++K A  L  ++    +  D +TYNI++   C +G   KA DL  
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLK 559

Query: 365 DMEAKGVAPDCVAFNTLM 382
               KG+  D   + +L+
Sbjct: 560 LRNEKGLIVDYAYYTSLV 577



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 168/309 (54%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V  YN +I  FC      +AK +F E+  +G++P  V+F+ +++ LCK+  ++E  +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M +  + P+ F Y+ L+ G C  GR++ A++LF  M+  G + N  +++ LI+G C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ I+ A++ Y +ML+ G+KP +V YNTL  GL ++  V +A KL DEM+  G+  D   
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T IDG CK G +  A+E+ + +      LD  +++ LI G C+ GR++ A      + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  D  TY ++I   C  G +     L  +M+  G  P  + +N LM G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 393 KVVELLHRM 401
               LL  M
Sbjct: 521 NANMLLEAM 529



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G  P  ++++TLINGLC++ +      L + M            PD  
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR------IYPDVF 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I GLCKEG +D A++L  +M+ + + P+ +T+ ++I G C +   + A   + +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++V ++ +++ LCK G + +A +L++ M  +G++P+   Y TL+DG+C  G +
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M   G   +  +++ LI+G+C++  +  A     EM+  G+KP   TY  +
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+  FKL  EMQ +G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
             D  +Y+ L++G CK+G+   A +L        LI D   Y  ++
Sbjct: 535 TPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 123/248 (49%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           +++ G  P    YN L++ FC  G +  AK +F  +   G +    S++ LING CK++ 
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++    L   M    I P V TY+ L  GL +  +++ A +LFDEMQ+ G+  +   +  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDG C++  I  A+  +  +  +  + D+  Y+ L++GLCK G +  A +L   +    
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D +TY  +I   C +G ++ A ++   M  +GV  D VAF  L+ G  R+       
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 396 ELLHRMDE 403
             L  M E
Sbjct: 454 RTLREMVE 461



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 35/305 (11%)

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF----- 188
           S+I   + + GK   AS    ++   G R + FV++ LM  +  +G V+ A + F     
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 189 --VSMESMGCKH----------------------------NVFSYSILINGYCKNKEIEG 218
               +   GC +                             V  Y+ILIN +CK   I  
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  +++E+  +G++PT V++NTL  GL +   ++  F+L   M+ + +  D + Y   I 
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK G +  A +LF  ++      +  +++ LIDG C+S R+  A   +H +    +  
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKP 361

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+V YN +++ LC  G ++KA  L  +M   G+ PD + + TL+ G  +  +    +E+ 
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421

Query: 399 HRMDE 403
             M+E
Sbjct: 422 KGMNE 426



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/221 (18%), Positives = 90/221 (40%), Gaps = 2/221 (0%)

Query: 186 ELFVSMESMGCKHNVFSY-SILINGYCKNKEIEGALSLYSEML-SKGIKPTVVTYNTLFI 243
           + + +M +    H +F     +I      K  + A S+++ +L + G + +   ++ L I
Sbjct: 102 QSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMI 161

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
             ++   V  A + F  ++              +D +  +   V     +  +       
Sbjct: 162 AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPP 221

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            ++ Y+ LI+  CK G ++ A  +F+ + +  L    V++N +I+ LC    +D+   L 
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ME   + PD   ++ L+ G  +        +L   M +R
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 206/389 (52%), Gaps = 9/389 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV++Y+ +I+G C+  +   AL    EM     E G    P A  Y++I+   CK G
Sbjct: 40  CAPNVVSYNIIIDGYCKARNIEKALAFLREM----EELGHPPTPHA--YSSIVQSFCKTG 93

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V KA ++  +M  K   PD+V +N ++ G   A   +EA+ LF  M  +G +P+VVT++
Sbjct: 94  NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYN 153

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LCK  K++EA  LLE M Q  V P    Y TL+D  C   R+ +A E+F  M   
Sbjct: 154 TMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEG 213

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH--QVE 252
            C     +YS+L N   +  ++  A  +YS+M  K +  T  TY+ + +GL ++    VE
Sbjct: 214 PCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVE 273

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A KL  EM    +A D +AY   I+GLCK     EA E+F+ +R       + +Y+ L+
Sbjct: 274 AA-KLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 332

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GL  + +L+ A EL + +     + D  +YN+MI   CA+G  ++A+ LF DM   G+ 
Sbjct: 333 EGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIV 392

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   +N +++G I++   S    L  RM
Sbjct: 393 LNTWTYNFMIVGFIKDEAWSSAWMLFKRM 421



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 198/409 (48%), Gaps = 11/409 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++ A GCEP+++ ++ L++GL R      A  LF  M N  G     CKPD V
Sbjct: 97  KAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM-NSRG-----CKPDVV 150

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GLCK   +D+A  LL +MK ++++P  VTY ++I   C      +A  +F +M
Sbjct: 151 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC-LTGR 180
            +         +SV+ ++L + GK+ EAS++   M +  V      Y+ ++ G   + G 
Sbjct: 211 AEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGG 270

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A +L   M       + ++YSILING CK +    A  ++ EM  +GI PTVVTYNT
Sbjct: 271 NVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    +++ A +L   M   G   DT +Y   I G C NG   EA  LF+ +    
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG----VLIADVVTYNIMIHALCADGKM 356
             L+  +Y+ +I G  K      AW LF  +  G    V   ++ TY I+I +LC   ++
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++A  L   M  KG  P    +  L+    R        EL   M   N
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRIN 499



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 185/386 (47%), Gaps = 11/386 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+    C      YS L N L R G  + A  ++ +M   N     VC  D  
Sbjct: 202 QAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKN-----VCMTDNT 256

Query: 62  IYTTIIDGLCK-EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y+ ++ GL K +G   +A +L+ +M  K I PD   Y+ +I G C A    EAK +F E
Sbjct: 257 -YSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQE 315

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P VVT++ +++ L    K+++A +L   M+  G  P+   YN ++ GFC  G 
Sbjct: 316 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGD 375

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS----KGIKPTVV 236
            N A  LF  M   G   N ++Y+ +I G+ K++    A  L+  M S    K   P + 
Sbjct: 376 TNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMF 435

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L   L +  QVE AFKL   M+  G       +   +  L + G + +A EL++ +
Sbjct: 436 TYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 495

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             + C+  + S + L+DG+ + G +  A +    +    ++ D  TY+ ++  LC  GK 
Sbjct: 496 SRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKA 555

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           D+A  L  ++   G  P+      L+
Sbjct: 556 DQARKLVEELVRDGKRPENQGLRQLL 581



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 205/446 (45%), Gaps = 49/446 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  + + GC+P+V+TY+T+I GLC+      A+ L E M   +        P  V
Sbjct: 132 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFV 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD--------------------------------- 88
            YTT+ID LCK   + +A E+  +M +                                 
Sbjct: 186 TYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDM 245

Query: 89  --KNINPDVVTYNSVIRGFCYANDSN-EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
             KN+     TY+ V+ G    +  N EA +L  EMM + + P+   +S++++ LCK  +
Sbjct: 246 CRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARR 305

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
             EA ++ + M   G+ P    YNTL++G   T ++  A EL   M   G   +  SY++
Sbjct: 306 PGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNL 365

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I G+C N +   A  L+ +M+  GI     TYN + +G  +      A+ LF  MQ   
Sbjct: 366 MIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGK 425

Query: 266 ----VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
                A + + Y   I  LCK   + EA +L   +R       ++ +  L+  L ++GRL
Sbjct: 426 NDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 485

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+EL+  + R      V + NI++  +   G +D+A D    M   G+ PD   ++ L
Sbjct: 486 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545

Query: 382 MLGCI---RNNETSKVVELLHRMDER 404
           ++G     + ++  K+VE L R  +R
Sbjct: 546 VVGLCWQGKADQARKLVEELVRDGKR 571



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 186/347 (53%), Gaps = 6/347 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+A++Y  +I  LCK G + +A+  L +M  ++  P+VV+YN +I G+C A +  +A   
Sbjct: 8   PNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAF 66

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM + G  P    +S I+   CK G + +A  +   M   G  P+   +N L+ G   
Sbjct: 67  LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 126

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +++ A+ELF SM S GCK +V +Y+ +I G CK K+++ A+ L   M  + + PT VT
Sbjct: 127 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 186

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL- 296
           Y TL   L +  ++++A+++F++M     A    AY    + L + G +VEA  ++  + 
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246

Query: 297 RILKCELDIRSYSCLIDGLCK--SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           R   C  D  +YS ++ GL K   G ++ A +L   +    +  D   Y+I+I+ LC   
Sbjct: 247 RKNVCMTD-NTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYAYSILINGLCKAR 304

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  +A ++F +M  +G++P  V +NTL+ G +   +    +EL + M
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 351



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 45/360 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA L T++      P+   YS LINGLC+      A  +F+EM  G G       P  
Sbjct: 272 VEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEM-RGRG-----ISPTV 325

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+++GL     +  A EL   M D+   PD  +YN +IRGFC   D+NEA  LF +
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQD 385

Query: 121 MMDQGV---------------------------------------QPNVVTFSVIMDELC 141
           M+  G+                                        PN+ T+ +++  LC
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K  ++EEA +LL  M   G  P+  ++  L+      GR++ A EL+  M  + C+  V 
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S +IL++G  +   ++ A     +M   GI P   TY+ L +GL    + ++A KL +E+
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            R G   +    R  +  LC  G    A E +  L  +  E+ +  ++ L+   C + +L
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKL 625



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 1/180 (0%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML  G+ P  + YN L   L +   +  A      M +H  A +  +Y   IDG CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           I +AL   R +  L       +YS ++   CK+G +  A ++F  +P      D+V +N+
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  L    K+ +A +LF  M ++G  PD V +NT++ G  +  +  + V LL RM + +
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 6/181 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L + ++  G  P++  +  L++ L R G    A  L++EM   N      C+    
Sbjct: 452 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRIN------CQQLVG 505

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               ++DG+ + G VD+AK+ L QM D  I PD  TY+ ++ G C+   +++A++L  E+
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +P       ++  LC  G  + A +    +  +GV     ++NTL+   CL  ++
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKL 625

Query: 182 N 182
           +
Sbjct: 626 D 626



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+ TY  LI+ LC+T     A  L   M +     G V  P   I+  ++  L + G +
Sbjct: 432 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDK----GFV--PSLKIWEVLLSRLARAGRL 485

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A EL  +M   N    V + N ++ G       +EAK    +M D G+ P+  T+  +
Sbjct: 486 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC  GK ++A +L+E +++ G RP       L+   C  G    A E +  + S+G 
Sbjct: 546 VVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGV 605

Query: 197 KHNVFSYSILINGYCKNKEIE 217
           +  +  ++ L+   C  ++++
Sbjct: 606 EVTLGMHNTLVTSCCLARKLD 626


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 207/409 (50%), Gaps = 15/409 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC------ 56
           A  LF  + + GC PN++TYS LI+G C+ G    A  +FE M        V        
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYD 631

Query: 57  -----KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                +P+ VIY  ++DG CK   V++A++LL  M  +   P+ + Y+++I G C     
Sbjct: 632 DDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 691

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +  EM + G    + T+S ++D   K  + + AS++L  M++    PN  +Y  +
Sbjct: 692 DEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 751

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A +L   ME  GC+ NV +Y+ +I+G+ +  +IE  L L   M SKG+
Sbjct: 752 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGV 811

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L     +   ++ A  L +EM++         YR  I+G   N   +E+L 
Sbjct: 812 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLG 869

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNIMIHA 349
           L   +        +  Y  L+D L K+ RL++A  L   +      L+    TYN +I +
Sbjct: 870 LLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 929

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           LC   K+DKA  LF +M  KGV P+   F +L+ G  RN++ S+ + LL
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 199/421 (47%), Gaps = 21/421 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA--LNLFEEMINGNGEFGVVCKPDA 60
           A  L  K+   G  P  + Y+ LI  +C    ++    L L E+  +     GVV   + 
Sbjct: 391 AYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL--NK 448

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +  ++    LC  G  +KA  ++ +M  +   PD  TY+ V+   C A+    A  LF E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEE 508

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +V T+++++D  CK G +E+A +    M ++G  PN   Y  L+  +    +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI-------- 231
           V+ A ELF +M S GC  N+ +YS LI+G+CK  ++E A  ++  M  SK +        
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFK 628

Query: 232 --------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                   +P VV Y  L  G  ++H+VE A KL D M   G   +   Y   IDGLCK 
Sbjct: 629 QYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 688

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + EA E+   +        + +YS LID   K  R  +A ++   +       +VV Y
Sbjct: 689 GKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 748

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G  R  +    +ELL RM  
Sbjct: 749 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGS 808

Query: 404 R 404
           +
Sbjct: 809 K 809



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 15/353 (4%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            LC+ G    AL L E       E  V   PD V YT +I GLC+    ++A + L +M+
Sbjct: 279 SLCKVGKWREALTLMET------ENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
             +  P+VVTY++++ G          KR+   MM +G  P+   F+ ++   C +G   
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFC------LTGRVNRAKELFVSMESMGCKHNVF 201
            A +LL+ M++ G  P   VYN L+   C          +  A++ +  M + G   N  
Sbjct: 390 YAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKI 449

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + S      C   + E A S+  EM+ +G  P   TY+ +   L    ++E AF LF+EM
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM 509

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R G+ AD + Y   +D  CK G I +A + F  +R + C  ++ +Y+ LI    K+ ++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             A ELF ++     + ++VTY+ +I   C  G+M+KA  +F  M      PD
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPD 622



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 158/342 (46%), Gaps = 51/342 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  L   +   GCEPN I Y  LI+GLC+ G    A  +  EM                
Sbjct: 658 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717

Query: 49  NGEFGV----------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +  F V                 C P+ VIYT +IDGLCK G  D+A +L+  M++K   
Sbjct: 718 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 777

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VVTY ++I GF           L   M  +GV PN VT+ V++D  CKNG ++ A  L
Sbjct: 778 PNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 837

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +A  Y  +++GF         KE    +ES+G    +           Y
Sbjct: 838 LEEMKQTHWPTHAAGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSLY 886

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            +L++   K + +E AL L  E+   S  +     TYN+L   L   ++V++AF+LF EM
Sbjct: 887 RLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEM 946

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + GV  +   + + I GL +N  I EAL L   +  + C L
Sbjct: 947 SKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVCPL 988



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 172/433 (39%), Gaps = 52/433 (12%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAVIYTTIIDG 69
           +  G +     Y+ L++ + R     V   L +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGE-------FLNVLVRK 209

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C+ G    A E L ++KD    P   TYN +I+ F  A+  + A  +  EM    ++ +
Sbjct: 210 YCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMD 269

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T       LCK GK  EA   L LM      P+   Y  L+ G C       A +   
Sbjct: 270 GFTLRCYAYSLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V YN L   +         H +E A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL 446

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +       D  +YS ++  LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLF 506

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + RG L+ADV TY IM+ + C  G +++A   F +M   G  P+ V +  L+   ++ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 389 NETSKVVELLHRM 401
            + S   EL   M
Sbjct: 567 KKVSYANELFETM 579


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 220/464 (47%), Gaps = 68/464 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   GC+PN  T+  L+ G C+ G T   L    E++N    FGV+  P+ V+
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL----ELLNSMESFGVL--PNKVV 219

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS---------------------- 100
           Y TI+   C+EG  D +++L+ +M+++ + PD+VT+NS                      
Sbjct: 220 YNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279

Query: 101 -----------------VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
                            +++GFC      +AK LF  + +     ++ ++++ +  L ++
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRH 339

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           GK  EA  +L+ MI  G+ P+ + YN LMDG C  G ++ AK +   M+  G   +  +Y
Sbjct: 340 GKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTY 399

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
             L++GYC   +++ A SL  EM+     P   T N L   L+ + ++  A +L  +M  
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-----------------------K 300
            G   DT      +DGLC +G + +A+E+ + +R+                         
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D+ +YS L++GLCK+GR   A  LF  +    L  D + YNI IH  C  GK+  A 
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  DME KG       +N+L+LG    N+  ++  L+  M E+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 213/461 (46%), Gaps = 68/461 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+  +   G  P   T++ LI  LC +     A  LF+EM          CKP+   +  
Sbjct: 134 LYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGI 187

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G CK G  DK  ELL  M+   + P+ V YN+++  FC    ++++++L  +M ++G
Sbjct: 188 LVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEG 247

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
           + P++VTF+  +  LCK GK+ +AS++   +EL   +G+ RPN+  YN ++ GFC  G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307

Query: 182 NRAKELF---------VSMESM--------------------------GCKHNVFSYSIL 206
             AK LF         VS++S                           G   +++SY+IL
Sbjct: 308 EDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNIL 367

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +  A ++   M   G+ P  VTY  L  G   + +V+ A  L  EM R+  
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +     +  L   G I EA EL R +      LD  + + ++DGLC SG L  A E
Sbjct: 428 LPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487

Query: 327 LFH-----------------------SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +                         SL     + D++TY+ +++ LC  G+  +A  LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLF 547

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +M  + + PD +A+N  +    +  + S    +L  M+++
Sbjct: 548 AEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 208/427 (48%), Gaps = 25/427 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  L  K++  G  P+++T+++ I+ LC+ G  + A  +F +M     E+  + +P+++
Sbjct: 235 DSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM--ELDEYLGLPRPNSI 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G CK G ++ AK L   +++ +    + +YN  ++G        EA+ +  +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ P++ +++++MD LCK G + +A  ++ LM + GV P+A  Y  L+ G+C  G+V
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK L   M    C  N ++ +IL++       I  A  L  +M  KG     VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
             GL    ++++A ++   M+ HG AA                       D   Y T ++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK G   EA  LF  +   K + D  +Y+  I   CK G++  A+ +   + +     
Sbjct: 533 GLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            + TYN +I  L    ++ + H L  +M  KG++P+   +NT +       +      LL
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLL 652

Query: 399 HRMDERN 405
             M ++N
Sbjct: 653 DEMMQKN 659



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 4/352 (1%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KP   +Y  +++   +E  V+    L   M    I+P+  T+N +IR  C ++  + A+ 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM ++G +PN  TF +++   CK G  ++  +LL  M   GV PN  VYNT++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 232
             GR + +++L   M   G   ++ +++  I+  CK  ++  A  ++S+M L + +   +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  +TYN +  G  ++  +E A  LF+ ++ +       +Y  ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + +        I SY+ L+DGLCK G L  A  +   + R  +  D VTY  ++H  C+
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            GK+D A  L  +M      P+    N L+         S+  ELL +M+E+
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEK 460



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 203/432 (46%), Gaps = 40/432 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV 55
           +EA  +  ++   G  P++ +Y+ L++GLC+ G      TIV L      +  NG     
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL------MKRNG----- 391

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
             PDAV Y  ++ G C  G VD AK LL +M   N  P+  T N ++         +EA+
Sbjct: 392 VSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAE 451

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM------------------- 156
            L  +M ++G   + VT ++I+D LC +G++++A ++++ M                   
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511

Query: 157 ----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
               I+    P+   Y+TL++G C  GR   AK LF  M     + +  +Y+I I+ +CK
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCK 571

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I  A  +  +M  KG   ++ TYN+L +GL   +Q+     L DEM+  G++ +   
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICT 631

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I  LC+ G + +A  L   +       ++ S+  LI   CK     +A E+F +  
Sbjct: 632 YNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET-A 690

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
             +       Y++M + L A G++ KA +L   +  +G       +  L++   + +E  
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELE 750

Query: 393 KVVELLHRMDER 404
               +LH+M ++
Sbjct: 751 VASGILHKMIDK 762



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 191/407 (46%), Gaps = 32/407 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +K  G  P+ +TY  L++G C  G    A +L +EM+  N      C P+A 
Sbjct: 379 DAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN------CLPNAY 432

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
               ++  L   G + +A+ELL +M +K    D VT N ++ G C + + ++A  +    
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 118 --------------FIEMMDQGV-----QPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                         +I ++D  +      P+++T+S +++ LCK G+  EA  L   M+ 
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMG 552

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
             ++P++  YN  +  FC  G+++ A  +   ME  GC  ++ +Y+ LI G     +I  
Sbjct: 553 EKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L  EM  KGI P + TYNT    L E  +VE A  L DEM +  +A + ++++  I 
Sbjct: 613 IHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIG 672

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
             CK      A E+F T  +  C      YS + + L  +G+L  A EL  + L RG  +
Sbjct: 673 AFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              + Y  ++ +LC   +++ A  +   M  KG   D  A   ++ G
Sbjct: 732 GTFL-YKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDG 777



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 6/291 (2%)

Query: 100 SVIRGFCYANDSNEA--KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           SV+  F  +N  ++A  +  F+       +P +  ++V+++   +  ++E  S L + M+
Sbjct: 80  SVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+ P  + +N L+   C +  V+ A+ELF  M   GCK N F++ IL+ GYCK    +
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             L L + M S G+ P  V YNT+        + + + KL ++M+  G+  D   + + I
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRI 259

Query: 278 DGLCKNGYIVEALELFRTLRILK----CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             LCK G +++A  +F  + + +       +  +Y+ ++ G CK G L+ A  LF S+  
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              +  + +YNI +  L   GK  +A  +   M  KG+ P   ++N LM G
Sbjct: 320 NDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDG 370


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 220/464 (47%), Gaps = 68/464 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   GC+PN  T+  L+ G C+ G T   L    E++N    FGV+  P+ VI
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL----ELLNAMESFGVL--PNKVI 219

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS---------------------- 100
           Y TI+   C+EG  D +++++ +M+++ + PD+VT+NS                      
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279

Query: 101 -----------------VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
                            +++GFC      +AK LF  + +     ++ ++++ +  L ++
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           GK  EA  +L+ M   G+ P+ + YN LMDG C  G ++ AK +   M+  G   +  +Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
             L++GYC   +++ A SL  EM+     P   T N L   L+++ ++  A +L  +M  
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL-----------------------K 300
            G   DT      +DGLC +G + +A+E+ + +R+                         
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D+ +YS L++GLCK+GR   A  LF  +    L  D V YNI IH  C  GK+  A 
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  DME KG       +N+L+LG    N+  ++  L+  M E+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 212/461 (45%), Gaps = 68/461 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+  +   G  P   T++ LI  LC +     A  LF+EM          CKP+   +  
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGI 187

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G CK G  DK  ELL  M+   + P+ V YN+++  FC    +++++++  +M ++G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
           + P++VTF+  +  LCK GK+ +AS++   +EL   +G+ RPN+  YN ++ GFC  G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307

Query: 182 NRAKELFVS-----------------------------------MESMGCKHNVFSYSIL 206
             AK LF S                                   M   G   +++SY+IL
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +  A ++   M   G+ P  VTY  L  G   + +V+ A  L  EM R+  
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +     +  L K G I EA EL R +      LD  + + ++DGLC SG L  A E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487

Query: 327 LFH-----------------------SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +                         SL     + D++TY+ +++ LC  G+  +A +LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +M  + + PD VA+N  +    +  + S    +L  M+++
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 209/427 (48%), Gaps = 25/427 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  +  K++  G  P+++T+++ I+ LC+ G  + A  +F +M     E+  + +P+++
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM--ELDEYLGLPRPNSI 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G CK G ++ AK L   +++ +    + +YN  ++G        EA+ +  +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P++ +++++MD LCK G + +A  ++ LM + GV P+A  Y  L+ G+C  G+V
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK L   M    C  N ++ +IL++   K   I  A  L  +M  KG     VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
             GL    ++++A ++   M+ HG AA                       D   Y T ++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK G   EA  LF  +   K + D  +Y+  I   CK G++  A+ +   + +     
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            + TYN +I  L    ++ + H L  +M+ KG++P+   +NT +       +      LL
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652

Query: 399 HRMDERN 405
             M ++N
Sbjct: 653 DEMMQKN 659



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 4/352 (1%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KP   +Y  +++   KE  V+    L   M    I P   T+N +IR  C ++  + A+ 
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM ++G +PN  TF +++   CK G  ++  +LL  M   GV PN  +YNT++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 232
             GR + ++++   M   G   ++ +++  I+  CK  ++  A  ++S+M L + +   +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  +TYN +  G  ++  +E A  LF+ ++ +   A   +Y  ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + +        I SY+ L+DGLCK G L  A  +   + R  +  D VTY  ++H  C+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            GK+D A  L  +M      P+    N L+    +    S+  ELL +M+E+
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 40/432 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTG-----HTIVALNLFEEMINGNGEFGVV 55
           +EA  +  ++   G  P++ +Y+ L++GLC+ G      TIV L      +  NG    V
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL------MKRNG----V 392

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C PDAV Y  ++ G C  G VD AK LL +M   N  P+  T N ++         +EA+
Sbjct: 393 C-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM------------------- 156
            L  +M ++G   + VT ++I+D LC +G++++A ++++ M                   
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511

Query: 157 ----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
               I+    P+   Y+TL++G C  GR   AK LF  M     + +  +Y+I I+ +CK
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I  A  +  +M  KG   ++ TYN+L +GL   +Q+     L DEM+  G++ +   
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I  LC+   + +A  L   +       ++ S+  LI+  CK     +A E+F +  
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET-A 690

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
             +       Y++M + L A G++ KA +L   +  +G       +  L+    + +E  
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750

Query: 393 KVVELLHRMDER 404
               +LH+M +R
Sbjct: 751 VASGILHKMIDR 762



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 32/407 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +K  G  P+ +TY  L++G C  G    A +L +EM+  N      C P+A 
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN------CLPNAY 432

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL---- 117
               ++  L K G + +A+ELL +M +K    D VT N ++ G C + + ++A  +    
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 118 --------------FIEMMDQGV-----QPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                         +I ++D  +      P+++T+S +++ LCK G+  EA  L   M+ 
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
             ++P++  YN  +  FC  G+++ A  +   ME  GC  ++ +Y+ LI G     +I  
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L  EM  KGI P + TYNT    L E  +VE A  L DEM +  +A + ++++  I+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLI 337
             CK      A E+F T  +  C      YS + + L  +G+L  A EL  + L RG  +
Sbjct: 673 AFCKVPDFDMAQEVFET-AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              + Y  ++ +LC   +++ A  +   M  +G   D  A   ++ G
Sbjct: 732 GTFL-YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDG 777



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 113/282 (40%), Gaps = 75/282 (26%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P++ITYSTL+NGLC+ G    A NLF EM+      G   +PD+V Y   I   CK+G
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM------GEKLQPDSVAYNIFIHHFCKQG 573

Query: 75  FVDKA-----------------------------------KELLLQMKDKNINPDVVTYN 99
            +  A                                     L+ +MK+K I+P++ TYN
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK----------------- 142
           + I+  C      +A  L  EMM + + PNV +F  +++  CK                 
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693

Query: 143 -----------------NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
                             G++ +A++LLE ++  G     F+Y  L++  C    +  A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            +   M   G   +  +   +I+G  K    + A S   +M+
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 203/406 (50%), Gaps = 47/406 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  K+ A GC P + TY+ L+NGLC+ G    A++L  ++++ NG     C PD V
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 330

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++IDGL KE    +A +L  +M  + +  D V Y ++IRG        +A  ++  M
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VVT S ++D L K G++  A ++ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++E A + + EML  G KP V TYN L
Sbjct: 451 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 510

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----------------- 284
             GL +    + A  + D+M     ++  + Y + +DGLCK+G                 
Sbjct: 511 ISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565

Query: 285 -----------------YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                             + EA+ LF  +R         +Y+ +I  L KSG++     +
Sbjct: 566 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAV 624

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           +  + R     D VTYN +++ +    +MD+AH  +L+M  +G  P
Sbjct: 625 YQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669



 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 210/406 (51%), Gaps = 22/406 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A +L  +    GC  ++ TY+ ++N L +      A+ L E+ I  NG     C P  
Sbjct: 241 IQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEK-ITANG-----CTPTI 294

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +++GLCK G +++A +LL ++ D    PDVVTY S+I G      S EA +LF E
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+  + V ++ ++  L + GK+ +AS + + M   G  P+    +T++DG    GR
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +F SME+ G   N   YS LI+G CK ++++ AL + ++M      P  +TYN 
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA---LELFRTLR 297
           L  GL +   VE A   FDEM   G   D + Y   I GLCK G    A   L+   + R
Sbjct: 475 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +        YS L+DGLCKSG+L+    LFH + R   +A+  T   +I  LC   ++D
Sbjct: 535 FV--------YSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVD 585

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN---NETSKVVELLHR 400
           +A  LF  +  +G+ P   A+N+++   I++   NE   V + + R
Sbjct: 586 EAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 12/391 (3%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           FG  P++ T++ +++GLC++G  + A++ FE +              A  ++ +I+GL K
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-------MPVSAATFSILINGLVK 236

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G + +A  L  +        D+ TY +++          EA  L  ++   G  P + T
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +++ LCK G++EEA  LL  ++  G  P+   Y +L+DG     R   A +LF  M 
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
           S G   +   Y+ LI G  +  +I  A S+Y  M S G  P VVT +T+  GL +  ++ 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++F  M+  G+A +   Y   I GLCK   +  ALE+   ++   C  D  +Y+ LI
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DGLCKSG ++ A   F  +       DV TYNI+I  LC  G  D A  +  DM +    
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-- 534

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
                +++L+ G  ++ +      L H M+ 
Sbjct: 535 ---FVYSSLVDGLCKSGKLEGGCMLFHEMER 562



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 183/388 (47%), Gaps = 6/388 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+V T++ LI G C       A  +  EM     +FGV   P    +  ++ GLCK G 
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREM---EEDFGVA--PSLKTHNLVLHGLCKSGK 205

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V  A +    ++ +++     T++ +I G   A    +A  L  E    G   ++ T++ 
Sbjct: 206 VLAAMDHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTA 264

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I++ L KN K++EA  L+E +   G  P    YN L++G C  GR+  A +L   +   G
Sbjct: 265 IVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V +Y+ LI+G  K K    A  L+ EM S+G+    V Y  L  GL +  ++ +A 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            ++  M  HG   D     T IDGL K G I  A+ +F+++       +   YS LI GL
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK+ ++  A E+   + +     D +TYNI+I  LC  G ++ A   F +M   G  PD 
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +N L+ G  +   T     +L  M  
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDMSS 532



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 39/346 (11%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
           V T N+++  F       EA  L    +    +P+V T++V++   C   + EEA  ++ 
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIR 178

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILING--- 209
           E+    GV P+   +N ++ G C +G+V  A + F ++  SM      FS  ILING   
Sbjct: 179 EMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFS--ILINGLVK 236

Query: 210 --------------------------------YCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                                             KNK+I+ A++L  ++ + G  PT+ T
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  GL ++ ++E A  L  ++  +G   D   Y + IDGL K     EA +LF+ + 
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD   Y+ LI GL ++G++  A  ++ ++     + DVVT + MI  L   G++ 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A  +F  MEA+G+AP+ V ++ L+ G  +  +    +E+L +M +
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 462



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 152/309 (49%), Gaps = 4/309 (1%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLF--IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           ++ ++V++ F    D++ A  LF  +     G Q +V T + ++D   +  +  EA  LL
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 142

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGYCK 212
           +  +    RP+   +N L+ G+CL      A  +   M E  G   ++ +++++++G CK
Sbjct: 143 KNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK 202

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           + ++  A+  + E + + +  +  T++ L  GL +   + +A  L  E   +G   D   
Sbjct: 203 SGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   ++ L KN  I EA+ L   +    C   I +Y+ L++GLCK GRL+ A +L   + 
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 DVVTY  +I  L  + +  +A+ LF +M ++G+A D V +  L+ G ++  +  
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 393 KVVELLHRM 401
           +   +   M
Sbjct: 382 QASSVYKTM 390



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 58/198 (29%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL----------FEEMING---N 49
           A A F ++   GC+P+V TY+ LI+GLC+ G+T  A  +          +  +++G   +
Sbjct: 488 ARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKS 547

Query: 50  GEF-------------GV------------VCK-------------------PDAVIYTT 65
           G+              GV            +CK                   P    Y +
Sbjct: 548 GKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNS 607

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           II  L K G V++ + +  +M  +   PD VTYN+++ G   AN  + A   ++EM  +G
Sbjct: 608 IISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666

Query: 126 VQPNVVTFSVIMDELCKN 143
             P V     + D+  K+
Sbjct: 667 YVPPVSILHKLADDRLKD 684


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 217/429 (50%), Gaps = 29/429 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           E   LF  +   G EPN+I+++T++N  C+ G+ +VA   F                   
Sbjct: 173 ELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLI 232

Query: 43  ------EEMINGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                  E+ +    F ++    C  + V YT +I G C+ G +D+A EL  QMK+    
Sbjct: 233 LGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCF 292

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV TY  ++  FC      EA + F EM++ G++PNV T++V++D  CK GKM+E  ++
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M++ G+  +   +N L+DG+C  G +  A  +  SM+      N  +Y+ LI G+C+
Sbjct: 353 LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCR 412

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            K ++ A++L ++M    + P +VTYNTL  GL +   V+ A++L   M + G   D   
Sbjct: 413 KKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT 472

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +  FID LCK G + +A ++F +L+    E +   Y+ LIDG CK+ +   A  LF  + 
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 + +T+N+++  L  +GK++ A  L   M      P    +  L+   +R ++  
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 393 KVVELLHRM 401
           +    L +M
Sbjct: 593 RANMFLDQM 601



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 189/410 (46%), Gaps = 29/410 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV------- 54
           EA  LF ++K  GC P+V TY+ L+   C  G    AL  FEEM+    E  V       
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337

Query: 55  --VCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                       V +  +IDG CK G ++ A  +L  MK   + 
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TYN +I GFC     + A  L  +M +  + PN+VT++ ++  LCK   ++ A +L
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
             LMI+ G  P+   +   +D  C  G+V +A ++F S++    + N F Y+ LI+GYCK
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCK 517

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            ++   A  L+  ML +G  P  +T+N L  GL +  +VE A  L D M +         
Sbjct: 518 AEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHT 577

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+ + +      A      +    C+ ++ +Y+  I   C+ GRL  A E+   + 
Sbjct: 578 YTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIK 637

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              ++ D   Y+++++A    G++D A  + + M   G  P    ++ L+
Sbjct: 638 EEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILL 687



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 8/385 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALN-LFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           +V +Y+ L   L R G  I  LN LF++M+N   E      P+ + + T+++  CK G V
Sbjct: 154 SVTSYNRLFMVLSRFG-LIDELNCLFKDMLNDGVE------PNLISFNTMVNAHCKIGNV 206

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             AK     +       D  TY S+I G+C  ++  +A ++F  M  +G   N V+++ +
Sbjct: 207 VVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNL 266

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C+ GK++EA +L   M + G  P+   Y  L+  FC  G+   A + F  M   G 
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + NV++Y++LI+ +CK  +++  + + S ML KG+  +VV +N L  G  +   +E A  
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAIC 386

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + D M+ + V  ++  Y   I G C+   +  A+ L   +   K   ++ +Y+ LI GLC
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLC 446

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+  +  AW L H + +   + D  T+   I  LC  GK+++AH +F  ++ K    +  
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +  L+ G  +  + S    L  RM
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRM 531



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 184/405 (45%), Gaps = 19/405 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL  K+      PN++TY+TLI+GLC+      A  L   MI      G V  PD   
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD----GFV--PDQRT 472

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +   ID LCK G V++A ++   +K+K+   +   Y ++I G+C A   ++A  LF  M+
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN +TF+V++D L K GK+E+A  L+++M +   +P    Y  L++        +
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           RA      M S GC+ NV +Y+  I  YC+   +  A  +  ++  +GI      Y+ L 
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                I Q++ AF +   M   G       Y   +  L    Y  E + L          
Sbjct: 653 NAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL---------- 702

Query: 303 LDIRSYSCLIDG--LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            D+ S +  +D   + K    +I   LF  +     + +V TY+ +I  LC    +  A 
Sbjct: 703 -DLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAF 761

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            LF  M+  G++P     N+L+  C +     + + LL  M E N
Sbjct: 762 RLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN 806



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 184/395 (46%), Gaps = 32/395 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  LK    E N   Y+ LI+G C+      A  LF+ M+         C P+++
Sbjct: 488 QAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG------CFPNSI 541

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++DGL KEG V+ A  L+  M   +  P V TY  +I      +D + A     +M
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QPNVVT++  +   C+ G++ EA +++  + + G+  ++F+Y+ L++ +   G++
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYC---KNKE----------------------- 215
           + A  + + M   GC+ +  +YSIL+        NKE                       
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIAD 721

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E    L+ +M+ +G  P V TY+ L  GL ++  +  AF+LF+ M+  G++     + +
Sbjct: 722 FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS 781

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            +   CK G   EAL L  ++        + SY  L+ GL + G  + A E+F SL    
Sbjct: 782 LLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCG 841

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
              D V + +++  L   G +D+   L   ME  G
Sbjct: 842 YNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 180/393 (45%), Gaps = 33/393 (8%)

Query: 21  TYSTLINGLCRTG----------HTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +++TLI  L  T           H + ALN F+ +   +G    V       Y  ++  L
Sbjct: 59  SFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHS-----YQPLLFIL 113

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
            + GF+  A+ +                NS+I+  C +  S+EA+ +   +       +V
Sbjct: 114 VRNGFLRAAENV---------------RNSMIKS-CVS--SHEARFVLNLLTHHEFSLSV 155

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +++ +   L + G ++E + L + M+  GV PN   +NT+++  C  G V  AK  F  
Sbjct: 156 TSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCG 215

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +   G   + F+Y+ LI GYCK  E+  A  ++  M  +G     V+Y  L  G  E+ +
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++ A +LF +M+  G   D   Y   +   C+ G   EAL+ F  +     E ++ +Y+ 
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LID  CK G++    E+  ++    L++ VV +N +I   C  G M+ A  +   M+   
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           V P+   +N L+ G  R     + + LL++M E
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYE 428



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 32/219 (14%)

Query: 14  GCEPNVITYSTLIN------------GLCRTGHTIVALN--------------LFEEMIN 47
           GCEP+  TYS L+             GL      I   N              LFE+M+ 
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                   C P+   Y+ +I GLCK   +  A  L   MK+  I+P    +NS++   C 
Sbjct: 735 QG------CVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
                EA RL   MM+     ++ ++ +++  L + G  E+A ++   ++  G   +  V
Sbjct: 789 LGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVV 848

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +  L+DG    G V+   +L   ME  GC+ +  ++++L
Sbjct: 849 WKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 189/351 (53%), Gaps = 7/351 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F +L   G EPN+I ++ +I GLC+ G    A  + EEM+ G G      KP+  
Sbjct: 258 RALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV-GKG-----WKPNVY 311

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +T++IDGLCK+G+ +KA  L L++ + +N  P+V+TY ++I G+C  +  N A+ L   
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSR 371

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +QG+ PN  T++ ++D  CK G  E A  L+ LM   G  PN   YN +++G C  GR
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++       G K + F+Y+IL++ +CK + I  AL+L+++ML  GI+P + +Y T
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 491

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L       ++++ +   F+E  R G+      Y + I G C+ G +  A++ F  L    
Sbjct: 492 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 551

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           C  D  +Y  +I GLCK  +   A  L+ S+    L+   VT   + +  C
Sbjct: 552 CAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 7/354 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T++ +I+     G+T  AL  F  +++   E      P+ + +T +I+GLCK G + +A 
Sbjct: 242 TFTLIISRFSGKGYTTRALWYFRRLVDMGLE------PNLINFTCMIEGLCKRGSIKQAF 295

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDE 139
           E+L +M  K   P+V T+ S+I G C    + +A RLF++++  +  +PNV+T++ ++  
Sbjct: 296 EMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISG 355

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            C+  K+  A  LL  M + G+ PN   Y TL+DG C  G   RA +L   M S G   N
Sbjct: 356 YCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPN 415

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           + +Y+ ++NG CK   ++ A  +  +    G+KP   TYN L     +   + +A  LF+
Sbjct: 416 LCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFN 475

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M + G+  D  +Y T I   C+   + E+   F     +      ++Y+ +I G C+ G
Sbjct: 476 KMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREG 535

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            L +A + FH L       D +TY  +I  LC   K D+A  L+  M  KG+ P
Sbjct: 536 NLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   G +P+ I+Y  ++   C+ G+ + A      M+    E G V   D   
Sbjct: 189 AELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVML----ERGFVV--DNAT 242

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T II     +G+  +A     ++ D  + P+++ +  +I G C      +A  +  EM+
Sbjct: 243 FTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV 302

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV T + ++D LCK G  E+A +L L+L+     +PN   Y  ++ G+C   ++
Sbjct: 303 GKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKL 362

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NRA+ L   M+  G   N  +Y+ LI+G+CK    E A  L + M S+G  P + TYN +
Sbjct: 363 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 422

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V+ A+K+ ++  ++G+  D + Y   +   CK   I +AL LF  +  +  
Sbjct: 423 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI SY+ LI   C+  R+K +   F    R  +I    TY  MI   C +G +  A  
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 542

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  +   G APD + +  ++ G  + ++  +   L   M E+
Sbjct: 543 FFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 163/334 (48%), Gaps = 1/334 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+      II    + G V+ A+ L  +M  + + PD ++Y  ++  +C   +  EA + 
Sbjct: 168 PNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKW 227

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M+++G   +  TF++I+      G    A      ++ +G+ PN   +  +++G C 
Sbjct: 228 LSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCK 287

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPTVV 236
            G + +A E+   M   G K NV++++ LI+G CK    E A  L+ +++ S+  KP V+
Sbjct: 288 RGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 347

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  +  G     ++ RA  L   M+  G+  +T  Y T IDG CK G    A +L   +
Sbjct: 348 TYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLM 407

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++ +Y+ +++GLCK GR++ A+++     +  L  D  TYNI++   C    +
Sbjct: 408 SSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENI 467

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            +A  LF  M   G+ PD  ++ TL+    R N 
Sbjct: 468 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 149/301 (49%), Gaps = 5/301 (1%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           ++  F       EA  + IEM +QG+ PN  T + I+    + G +E A  L E M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V+P++  Y  ++  +C  G +  A +    M   G   +  +++++I+ +        AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             +  ++  G++P ++ +  +  GL +   +++AF++ +EM   G   + + + + IDGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 281 CKNGYIVEALELFRTLRILKCE---LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           CK G+  +A  LF  L++++ E    ++ +Y+ +I G C+  +L  A  L   +    L+
Sbjct: 321 CKKGWTEKAFRLF--LKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +  TY  +I   C  G  ++A+DL   M ++G +P+   +N ++ G  +     +  ++
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKM 438

Query: 398 L 398
           L
Sbjct: 439 L 439



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V   +++ F   GR+  A E+ + M + G   N  + + +I    +   +E A  L+ EM
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G++P  ++Y  + +   +I  +  A K    M   G   D   +   I      GY 
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             AL  FR L  +  E ++ +++C+I+GLCK G +K A+E+   +       +V T+  +
Sbjct: 257 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316

Query: 347 IHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I  LC  G  +KA  LFL +  ++   P+ + +  ++ G  R ++ ++   LL RM E+
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQ 375



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 6/141 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF K+   G +P++ +Y+TLI   CR      +   FEE +      G++  P   
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV----RIGII--PTNK 522

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I G C+EG +  A +   ++ D    PD +TY ++I G C  +  +EA+ L+  M
Sbjct: 523 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582

Query: 122 MDQGVQPNVVTFSVIMDELCK 142
           +++G+ P  VT   +  E CK
Sbjct: 583 IEKGLVPCEVTRITLAYEYCK 603


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 212/401 (52%), Gaps = 7/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  ++ + G   NVI   +L+ G C  G   +AL LF+E++ G    GVV  PD 
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG----GVV--PDV 360

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           VI++ +I+G  K G ++KA EL  +MK   I P+V   NS++ GF   N    A  LF E
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            ++ G+  NVVT+++++  L + GK+ EA  L E M+  G+ P+   YN L+ G C  G 
Sbjct: 421 AVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGC 479

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  +  S+   G K N  +Y++LI+G+ K  + E A  ++ +M++  I PT  T+NT
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNT 539

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL +  +V       +   + G  + +  Y + IDG  K G +  AL  +R +    
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ LIDGLCKS ++ +A E+   +    +  DVV Y+ +I   C    M+ A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             F ++   G+ P+ V +N+++ G I  N     + L   M
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 200/387 (51%), Gaps = 6/387 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+TY+ L+  L   G    A NL+E+M++          P  V Y  +I G CK+G +D
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKG------ITPSLVSYNNLILGHCKKGCMD 481

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA  +L  + ++ + P+ VTY  +I GF    DS  A  +F +MM   + P   TF+ ++
Sbjct: 482 KAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + L K G++ E    L   I+ G    +  YN+++DGF   G V+ A   +  M   G  
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGIS 601

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ LI+G CK+ +I  AL ++S+M  KG+K  VV Y+ L  G  ++H +E A K 
Sbjct: 602 PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF 661

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F E+   G+  +T  Y + I G      +  AL L + +   K   D++ Y+ +I GL K
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLK 721

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G+L +A +L+  +    ++ D+V Y ++I+ L  +G+++ A  +  +M+   + P  + 
Sbjct: 722 EGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLV 781

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
           +N L+ G  R     +   L   M ++
Sbjct: 782 YNILIAGNFREGNLQEAFRLHDEMLDK 808



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+ + G  P++++Y+ LI G C+ G    A ++ + ++    E G+  KP+AV
Sbjct: 447 EACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL----ERGL--KPNAV 500

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDG  K+G  ++A  +  QM   NI P   T+N+VI G       +E +      
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG     +T++ I+D   K G ++ A      M + G+ P+   Y +L+DG C + ++
Sbjct: 561 IKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKI 620

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M+  G K +V +YS LI+G+CK  ++E A   ++E+L  G+ P  V YN++
Sbjct: 621 GLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSM 680

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   ++ +E A  L  EM ++ V  D   Y + I GL K G +  AL+L+  +     
Sbjct: 681 ISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI 740

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI  Y+ LI+GL  +G+L+ A ++   +    +   V+ YNI+I     +G + +A  
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           L  +M  KG+ PD   ++ L+ G ++ + T
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 182/383 (47%), Gaps = 7/383 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P V   + L+  + R      A  L++EM+   G +G     D      ++    KEG  
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVE-RGIYG-----DCYTLHVVMRACMKEGKF 236

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++ ++   + K + +  D   Y+ +++  C   D N A  L  EM + G  P+  T++ +
Sbjct: 237 EEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAV 296

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +    K G   EA +L + M+ +G+  N  V  +LM G+C+ G VN A +LF  +   G 
Sbjct: 297 IVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGV 356

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V  +S+LING  K  ++E A  LY+ M   GI+P V   N+L  G  E + +E A+ 
Sbjct: 357 VPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG 416

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LFDE   HG+  +   Y   +  L + G + EA  L+  +        + SY+ LI G C
Sbjct: 417 LFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G +  A+ +  S+    L  + VTY ++I      G  ++A  +F  M A  +AP   
Sbjct: 476 KKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDH 535

Query: 377 AFNTLMLGCIRNNETSKVVELLH 399
            FNT++ G  +    S+  + L+
Sbjct: 536 TFNTVINGLGKTGRVSETQDKLN 558



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 175/357 (49%), Gaps = 5/357 (1%)

Query: 49  NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
           +G +G   + D+ ++  ++    +   +  A E    M + ++ P V   N+++      
Sbjct: 141 SGRYGF--ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRR 198

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N   +A++L+ EM+++G+  +  T  V+M    K GK EE  +  +     G+  +A  Y
Sbjct: 199 NMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAY 258

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + L+   C    +N A EL   M   G   +  +Y+ +I    K      AL L  EM+S
Sbjct: 259 SILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G+   V+   +L  G   +  V  A +LFDE+   GV  D   +   I+G  K G + +
Sbjct: 319 VGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMI 347
           A EL+  ++++  + ++   + L++G  +   L+ A+ LF  ++  G  I +VVTYNI++
Sbjct: 379 AYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG--ITNVVTYNILL 436

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             L   GK+++A +L+  M +KG+ P  V++N L+LG  +     K   +L  + ER
Sbjct: 437 KWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILER 493


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 221/472 (46%), Gaps = 75/472 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++K    EP +IT+++L+NGLCR      A  + EEM      +G V  PD  
Sbjct: 270 EAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM----EVYGFV--PDRF 323

Query: 62  IYTTIIDG-----------------------------------LCKEGFVDKAKELLLQM 86
            YTT+ DG                                   LCKEG ++KA+E+L + 
Sbjct: 324 TYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF 383

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
            +  + P  V +N+++ G+C   D N+A     +M   G++PN VT++ ++ + C+   M
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNM 443

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           EEA + ++ M++ GV PN   YNTL+DG+  +   +R  ++   ME  G K NV SY  L
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK+  I  A  +  +M+ +G+ P    YN L  G     +++ AF+ FDEM    +
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y   I+GLCK G ++EA  L   +       D+ +Y+ LI G   +G ++ A E
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623

Query: 327 LFHSLPR-GV---------------------------------LIADVVTYNIMIHALCA 352
           L+ ++ + G+                                 L+ D V YN +IH    
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVE 683

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            G + KA  L   MEA+G+ PD + +N L+LG  +     KV  L++ M  R
Sbjct: 684 HGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIR 735



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 211/471 (44%), Gaps = 111/471 (23%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L T +K  G  P V  Y+ +I GLC+      A  LF+EM++          P+ + 
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR------VAPNRIT 254

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG CK G +++A  +  +MK +N+ P ++T+NS++ G C A    EA+R+  EM 
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 123 DQGVQPNVVTF-----------------------------------SVIMDELCKNGKME 147
             G  P+  T+                                   S++++ LCK G ME
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A ++L+  ++ G+ P    +NT+++G+C  G +N+A      ME++G + N  +Y+ L+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             +C+ K +E A     +M+ KG+ P V TYNTL  G       +R F++ +EM++ G+ 
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI--------------- 312
            +                                   + SY CLI               
Sbjct: 495 PN-----------------------------------VISYGCLINCLCKDANILEAEVI 519

Query: 313 --------------------DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
                               DG C +G+LK A+  F  +    ++  +VTYNI+I+ LC 
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            GK+ +A +L  ++  KG++ D + +N+L+ G        K +EL   M +
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKK 630



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 196/421 (46%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+A L+  +K  G  P+V + +  +  L  T      L LF E++    E G+  +PD  
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIV----ESGL--RPDQF 183

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I    K G + +A EL+  MK   ++P V  YN VI G C      +A++LF EM
Sbjct: 184 MYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEM 243

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+ V PN +T++ ++D  CK G++EEA  + E M    V P    +N+L++G C    +
Sbjct: 244 LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMM 303

Query: 182 NRAKELFVSMESMGCKHNVFSY-----------------------------------SIL 206
             A+ +   ME  G   + F+Y                                   SIL
Sbjct: 304 EEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSIL 363

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +N  CK   +E A  +  + L  G+ P  V +NT+  G  ++  + +A+   ++M+  G+
Sbjct: 364 LNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL 423

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y + +   C+   + EA +  + +       ++ +Y+ LIDG  +S      ++
Sbjct: 424 RPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQ 483

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-C 385
           +   + +  L  +V++Y  +I+ LC D  + +A  +  DM  +GV P+   +N L+ G C
Sbjct: 484 ILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSC 543

Query: 386 I 386
           I
Sbjct: 544 I 544



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 40/417 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K    G  P  + ++T++NG C+ G    A    E+M        V  +P+ V
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM------EAVGLRPNHV 428

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++   C+   +++A++ + +M +K + P+V TYN++I G+  +   +   ++  EM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNV+++  +++ LCK+  + EA  +L  M+  GV PNA +YN L+DG C+ G++
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A   F  M +      + +Y+ILING CK  ++  A +L SE+  KG+   V+TYN+L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV-------------- 287
             G      V++A +L++ M++ G+      Y   I G  K G ++              
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLV 668

Query: 288 --------------------EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                               +A  L   +     + D  +Y+CLI G  K GR+     L
Sbjct: 669 PDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            + +    LI    TY+I+I   C     D A+  + +M   G  P     + L+ G
Sbjct: 729 VNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITG 785



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 171/334 (51%), Gaps = 5/334 (1%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEG-FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           F +   P   +++ ++  +C E   V ++ EL + MK   + P V + N  +        
Sbjct: 103 FSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKR 162

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             +  +LF E+++ G++P+   +   +    K G ++ A +L+  M + GV P  FVYN 
Sbjct: 163 YEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNV 222

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ G C   R+  A++LF  M       N  +Y+ LI+GYCK  ++E A ++   M  + 
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           ++PT++T+N+L  GL     +E A ++ +EM+ +G   D + Y T  DG  K G +  ++
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342

Query: 291 ELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
            L  +   ++  + I  Y+C  L++ LCK G ++ A E+        L    V +N +++
Sbjct: 343 TL--SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             C  G ++KA+     MEA G+ P+ V +N+L+
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G  PN   Y+ LI+G C  G    A   F+EM+       +V  P  
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE----IV--PTL 567

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I+GLCK+G V +A+ L  ++  K ++ DV+TYNS+I G+  A +  +A  L+  
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P + T+  ++    K G +    ++ + M+Q+ + P+  +YN L+  +   G 
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +A  L  +ME+ G + +  +Y+ LI G+ K   +    +L ++M  +G+ P   TY+ 
Sbjct: 687 VQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDI 746

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           L +G  ++   + A+  + EM  +G           I GL + G
Sbjct: 747 LIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 7/264 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F ++ A    P ++TY+ LINGLC+ G  + A NL  E+      F      D +
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF------DVI 603

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G    G V KA EL   MK   I P + TY+ +I G C        ++++ EM
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEM 662

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P+ V ++ ++    ++G +++A  L   M   G++P+   YN L+ G    GR+
Sbjct: 663 LQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRM 722

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++ K L   M+  G      +Y ILI G+CK K+ +GA   Y EM   G  P+V   + L
Sbjct: 723 HKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNL 782

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
             GL E  +   A  +  EM   G
Sbjct: 783 ITGLREEGRSHDADVICSEMNMKG 806



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%)

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           E   V  + +L+  M++ GV     +   F++ L       + L+LF  +       D  
Sbjct: 124 ESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQF 183

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
            Y   I    K G LK A EL   + RG +   V  YN++I  LC + +M  A  LF +M
Sbjct: 184 MYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEM 243

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             + VAP+ + +NTL+ G  +  +  +   +  RM   N
Sbjct: 244 LDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 220/434 (50%), Gaps = 44/434 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   GCEPN  TYSTLINGLC +G    AL+   EM       GV+  P    
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMT----RHGVL--PTVHT 335

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T  I  LC  G ++ A ++ + MK K   P+V TY S+I G      S  A  LF  M 
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMS 392

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV PN VT++ +M+ L +N +++ A  +  +M + G  PN   YN L+ G+C  G   
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 183 RAKELFVSM-----------------------------------ESMGCKHNVFSYSILI 207
           +A  +  +M                                   ++ GC+ + +SY+ LI
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G+CK  ++E A  +++EM+ +G+ P  VTY  L  G  +  +++ A ++ + M+R G  
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y   I GL K      A EL + +   K   D+ +YS +I+GLC +G + +A E+
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F+ + +   + ++ TY+ +I AL  +G++++A ++F +++ +G+ PD V +  ++  C+ 
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 388 NNETSKVVELLHRM 401
           + +  +  + L  M
Sbjct: 693 SGKVDRAFDFLGEM 706



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 198/383 (51%), Gaps = 9/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +K  GC+PNV TY++LI+G      + +A+ LF  M       GVV  P+ V
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRM----SRDGVV--PNTV 401

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++ L +   +D A  +   M      P+  +YN +IRG+C   D+ +A  +   M
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P +VT+++I+   C +G  + A ++LELM   G +P+ + Y  L+ GFC   ++
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +F  M   G   N  +Y+ LI+GYCK+++++ A  +   M   G +P V TYN L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + +    A +L   M    ++ D   Y T I+GLC NG I  ALE+F  +    C
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI  L + GR++ A E+F  L +  LI D VTY  MI      GK+D+A D
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
              +M   G  P    ++ L+ G
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKG 724



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 44/425 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +  + TY+TL+  L +   T   ++ + +++          +P+ +IY ++I+ LCK+
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG------LQPNLLIYNSVINALCKD 241

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V  A+ ++ ++    + PD  TY S+I G+C   D + A  +F  M ++G +PN  T+
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S +++ LC +G++ EA   +  M + GV P    +   +   C  GR+  A ++F+ M+ 
Sbjct: 302 STLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK 361

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GCK NV++Y+ LI+G    +    A+ L+  M   G+ P  VTYN L   L E  +++ 
Sbjct: 362 KGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDS 418

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-------------------- 293
           A  +F+ M +HG   +T +Y   I G C  G   +A+ +                     
Sbjct: 419 ALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIK 478

Query: 294 ------------RTLRILK---CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
                       R L ++K   C+ D  SY+ LI G CK  ++++A  +F+ +    L  
Sbjct: 479 GYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCP 538

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           + VTY  +I   C D K+D A  +   M+  G  P+   +N L+ G  + N  S   EL 
Sbjct: 539 NEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 598

Query: 399 HRMDE 403
             M E
Sbjct: 599 KVMLE 603



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 32/403 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ +F ++   G  PN +TY+ LI+G C+      A  + E M          C+P+   
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG------CRPNVQT 577

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I GL K+     A+EL   M ++ I+PDVVTY++VI G C       A  +F +M+
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMV 637

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN+ T+S ++  L + G++EEA ++   + + G+ P+   Y  +++   ++G+V+
Sbjct: 638 KHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVD 697

Query: 183 RAKELFVSMESMGCKHNVFSYSILING------YCK------------------NKEIEG 218
           RA +    M + GC+  + +Y +LI G      Y K                  NK++  
Sbjct: 698 RAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVIS 757

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            LS  S++     + +   Y+ L   L    +   A  L+  M       +   Y+ F+ 
Sbjct: 758 VLS--SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLI 815

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            L +   +  A+++F+ +   +CEL +  Y  LI  LC+  R K A  +F  +    L A
Sbjct: 816 SLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNA 875

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           D + + I+I+ L   G  D   +    ME     P   A   L
Sbjct: 876 DEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 152/288 (52%), Gaps = 10/288 (3%)

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---GVRPNAFVYNTLMD 173
           +++M  Q G +  + T++ ++ +L    K+   S +++   QI   G++PN  +YN++++
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQL---NKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C  G V  A+ +   +   G K + F+Y+ +I GYC+N++++ A  +++ M  +G +P
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
              TY+TL  GL    +V  A     EM RHGV      +   I  LC  G I +A ++F
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             ++   C+ ++ +Y+ LI G   S   ++A  LFH + R  ++ + VTYN +++ L  +
Sbjct: 357 IDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++D A  +F  M   G  P+  ++N L+ G     +T K + +L  M
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 1/169 (0%)

Query: 211 CKNK-EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C NK E+  AL+       +G K  + TY TL I L +++        + ++ R G+  +
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y + I+ LCK+G + +A  +   +     + D  +Y+ +I G C++  L  A+E+F+
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            +       +  TY+ +I+ LC  G++++A D   +M   GV P    F
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 211/431 (48%), Gaps = 50/431 (11%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  +K  G EPNV TY+ L+  LC+      A  L  EM N        C PDAV YTT
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPDAVSYTT 221

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  +C+ G V + +EL      +   P V  YN++I G C  +D   A  L  EM+++G
Sbjct: 222 VISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ--------------------------- 158
           + PNV+++S +++ LC +G++E A   L  M++                           
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336

Query: 159 ---------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                     G++PN   YNTL+ GFC  G + +A  +F  ME +GC  N+ +Y  LING
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + K   ++GA+ ++++ML+ G  P VV Y  +   L    + + A  L + M +   A  
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +  FI GLC  G +  A ++FR + +  +C  +I +Y+ L+DGL K+ R++ A+ L 
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516

Query: 329 HSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
             +  RGV  +   TYN ++H  C  G    A  L   M   G +PD +  N ++L   +
Sbjct: 517 REIFMRGVEWSS-STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575

Query: 388 NNETSKVVELL 398
             +  +  ++L
Sbjct: 576 QGKAERAAQML 586



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 14/398 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           KL+ F C  ++  + ++I+   + G    A+ +F  +     EFG  C P   IY  ++D
Sbjct: 103 KLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI----KEFG--CDPSVKIYNHVLD 154

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L  E  +     +   MK     P+V TYN +++  C  N  + AK+L +EM ++G  P
Sbjct: 155 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           + V+++ ++  +C+ G ++E  +L E        P   VYN L++G C       A EL 
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELM 269

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   NV SYS LIN  C + +IE A S  ++ML +G  P + T ++L  G F  
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329

Query: 249 HQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
                A  L+++M R  G+  +  AY T + G C +G IV+A+ +F  +  + C  +IR+
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y  LI+G  K G L  A  +++ +       +VV Y  M+ ALC   K  +A  L   M 
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  AP    FN  + G           ++  +M++++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 11/282 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A ++F+ ++  GC PN+ TY +LING  + G    A+ ++ +M+         C P+ 
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG------CCPNV 422

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+YT +++ LC+     +A+ L+  M  +N  P V T+N+ I+G C A   + A+++F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M  Q    PN+VT++ ++D L K  ++EEA  L   +   GV  ++  YNTL+ G C  G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPTVV 236
               A +L   M   G   +  + +++I  YCK  + E A  +  +++S G    +P V+
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVI 601

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           +Y  +  GL   +  E    L + M   G+      +   I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 5/271 (1%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           +TF V++ +L  +G+++    LL+ M   G   +  ++ +++  +   G   RA E+F  
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           ++  GC  +V  Y+ +++       I+    +Y +M   G +P V TYN L   L + ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+ A KL  EM   G   D  +Y T I  +C+ G + E  EL         E  +  Y+ 
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNA 251

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+GLCK    K A+EL   +    +  +V++Y+ +I+ LC  G+++ A      M  +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             P+    ++L+ GC     T   ++L ++M
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 43/224 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L   +    C P+V T++  I GLC  G    A  +F +M     E    C P+ V
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM-----EQQHRCPPNIV 494

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGL K   +++A  L  ++  + +     TYN+++ G C A     A +L  +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-------------------------- 155
           M  G  P+ +T ++I+   CK GK E A+Q+L+L                          
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSN 614

Query: 156 -----------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
                      MI  G+ P+   ++ L++ F L   V RA + F
Sbjct: 615 CREDGVILLERMISAGIVPSIATWSVLINCFILDDIV-RAHDQF 657


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 208/436 (47%), Gaps = 42/436 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++K  G  P   TY+TL++   R G    A  + E M      +G   +PD  
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLR 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +  GLC+ G VD+A  L  +M+  +   PDVVTYN+++        S++A RL  E
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+GV+P +VT ++++  LCK GK+EEA   LE + + G+ P+   YNTL+D +C  G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 181 VNRAKELFVSMESMGCKHNVF-----------------------------------SYSI 205
           V +A  L   M   G K + F                                   SY  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  Y K    E AL L+ +M+ + + P++ TYNTL  GL  + +++ A    +E+   G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D   Y   I   CK G +  A      +     + D+ + + L++GLC  G+L  A 
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF S        DV+TYN +I ++C  G +D A   F DME KG+ PD   +N ++   
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674

Query: 386 IRNNETSKVVELLHRM 401
                + +   +LH++
Sbjct: 675 SEAGRSEEAHNMLHKL 690



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 190/404 (47%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A  + ++ FG  P+ +TY+TL+N  CR G    A  L   M       G+   P   
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRD----GIA--PTQP 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++    + G++ +A +++  M      PD+ TYN +  G C A   +EA RL  EM
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 122 MDQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                  P+VVT++ ++D   K     +A +LLE M   GV+P    +N ++   C  G+
Sbjct: 340 ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A      +   G   +V +Y+ LI+ YCK   +  A +L  EM+ KG+K    T NT
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L ++ + E A +L     + G   D  +Y T +    K      AL L+  +   K
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               I +Y+ LI GLC+  RLK A +  + L    L+ D  TYNI+IHA C +G ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                M      PD V  NTLM G   + +  K ++L     E+
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 9/379 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  L      PN  T++ L++  C  G    AL     M      FG+   PDAV Y T
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG----FGL--SPDAVTYNT 248

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++  C++G + +A+ LL +MK   I P   TYN+++  F       +A ++   M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR-PNAFVYNTLMDGFCLTGRVNR- 183
            +P++ T++V+   LC+ GK++EA +L + M ++    P+   YNTL+D  C   R +  
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDA-CFKWRCSSD 367

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M   G K  + +++I++   CK  ++E AL    ++  +G+ P V+TYNTL  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              +   V +AF L DEM   G+  DT+   T +  LCK     +A EL  +        
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  SY  ++    K    + A  L+  +    LI  + TYN +I  LC   ++ +A D  
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 364 LDMEAKGVAPDCVAFNTLM 382
            ++  KG+ PD   +N ++
Sbjct: 548 NELVEKGLVPDETTYNIII 566



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 196/406 (48%), Gaps = 10/406 (2%)

Query: 3   AAALFTKLKAF-GCEPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPD 59
           AA L   L+   G  P++   + +++ L R+  T+   +L++F  +I       +   P+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE------LRLHPN 207

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              +  ++   C +G +  A   L  M+   ++PD VTYN+++   C      EA+ L  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M   G+ P   T++ ++    + G +++A++++E M   G  P+   YN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327

Query: 180 RVNRAKELFVSMESMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +V+ A  L   ME +     +V +Y+ L++   K +    AL L  EM  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +   L +  ++E A    +++   G+A D   Y T ID  CK G + +A  L   +  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              ++D  + + ++  LCK  R + A EL HS P+   + D V+Y  ++ A   +   + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  L+  M  + + P    +NTL+ G  R     + ++ L+ + E+
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 175/379 (46%), Gaps = 30/379 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING---------NGEF 52
           EA     K+   G  P+VITY+TLI+  C+ G+   A  L +EM+           N   
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 53  GVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
             +CK                    PD V Y T++    KE   + A  L  QM ++ + 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + TYN++I+G C      EA     E++++G+ P+  T+++I+   CK G +E A + 
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+    NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL  + +M  KG++P   TYN +   L E  + E A  +  ++   G  + ++A
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELD-IRSYSCLIDGLCKSGRLKIAWELFHSL 331
                        + E           K + + + +Y   ++GLC  G+LK A  +   +
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 332 PRGVLIADVVTYNIMIHAL 350
            +  +  D  TY  ++  L
Sbjct: 762 MQKGMPVDSSTYITLMEGL 780



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 11/269 (4%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++ TY+TLI GLCR      A++   E++    E G+V  PD   Y  II   CKEG +
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELV----EKGLV--PDETTYNIIIHAYCKEGDL 575

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A     +M + +  PDVVT N+++ G C     ++A +LF   +++G + +V+T++ +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  +CK G ++ A    + M   G++P+AF YN ++      GR   A  +   +   G 
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695

Query: 197 KHNVFSYSILINGYCKN---KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
               F+  +L          KE EG     +E   K     + TY     GL    Q++ 
Sbjct: 696 LSQSFACPLLKPSSADEADVKEHEGKPE--AESSEKAQDNALETYMERLNGLCTGGQLKE 753

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           A  + DEM + G+  D+  Y T ++GL K
Sbjct: 754 AKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 44/183 (24%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  LF      G + +VITY+TLI  +C+ G    AL+ F++M + G        +PDA
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG-------LQPDA 664

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKN----------INPDVV-------------- 96
             Y  ++  L + G  ++A  +L ++ D            + P                 
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724

Query: 97  ------------TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
                       TY   + G C      EAK +  EMM +G+  +  T+  +M+ L K  
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQ 784

Query: 145 KME 147
           K +
Sbjct: 785 KRQ 787


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 202/385 (52%), Gaps = 7/385 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TYS  I+ LC++      + L E ++    +FG  C PD       +D LCK   +  A 
Sbjct: 233 TYSRWISALCQSER----IELVERLLADMDKFG--CFPDIWACNIYVDCLCKHNRLHDAL 286

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           + L  M  +  NPDVVTY +V+   C      EA  L+ EM+ +G++P++V   V++  L
Sbjct: 287 KTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGL 346

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           CK+ K++EA +L   M+ + +  N  +YN L+ GF  +G +N+A ++   M + GC+ +V
Sbjct: 347 CKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDV 406

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            +Y+I +N YC    I+ A  L  EM   GI  P   +YN +  GL + HQ++RAF    
Sbjct: 407 VTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVS 466

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +    G   D  +    ID  CK   +  AL+LF+ +     + D  +Y  LI+GL   G
Sbjct: 467 DHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVG 526

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
              +A E+F  + +  ++ +V  YNIM+H LC  G+ ++A  +FL M  K V+PD + FN
Sbjct: 527 YYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFN 586

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+    + +   + ++L   M  R
Sbjct: 587 TLIYWLGKCSRAIEAIDLFRDMTAR 611



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 191/362 (52%), Gaps = 7/362 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V+TY+T++  LC       A+ L+EEM+          KPD V    +I GLCK 
Sbjct: 296 GTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRG------LKPDIVACGVLIFGLCKS 349

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD+A EL L+M   N+  +V  YN++I GF  +   N+A ++   M   G +P+VVT+
Sbjct: 350 DKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTY 409

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  C  G ++EA +L+E M   G V P+ + YN ++ G C   +++RA        
Sbjct: 410 NIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHM 469

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +G   ++ S +ILI+ +CK K++  AL L+ EM  KGI+   VTY TL  GL+ +    
Sbjct: 470 EVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYY 529

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++F++M +  V  +   Y   +  LCK G   +A ++F  +   +   DI +++ LI
Sbjct: 530 LAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLI 589

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             L K  R   A +LF  +    +  D +T+  +I  L  +GK  +A++++  M   G+ 
Sbjct: 590 YWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGII 649

Query: 373 PD 374
            D
Sbjct: 650 LD 651



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 152/296 (51%), Gaps = 7/296 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ +   E NV  Y+ LI+G  R+G    A  +   M   NG     C+PD V
Sbjct: 354 EAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVM-RTNG-----CEPDVV 407

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI-NPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y   ++  C  G + +A++L+ +M+   I NPD  +YN +++G C A+  + A     +
Sbjct: 408 TYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSD 467

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+ G   ++V+ ++++D  CK  K+  A +L + M   G++ +A  Y TL++G    G 
Sbjct: 468 HMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGY 527

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A+E+F  M       NV  Y+I+++  CK  + E A  ++ +M+ K + P ++T+NT
Sbjct: 528 YYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNT 587

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           L   L +  +   A  LF +M   G+  D+  +R  I GL + G   +A E++  +
Sbjct: 588 LIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYM 643



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 7/382 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           +    ++++ G   +   Y  L++G  R G     ++ F+EM+         C+   V Y
Sbjct: 146 SEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSG------CREFGVDY 199

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
              I  L K    D  ++      DK       TY+  I   C +      +RL  +M  
Sbjct: 200 NRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDK 259

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G  P++   ++ +D LCK+ ++ +A + LE M   G  P+   Y T++   C   +   
Sbjct: 260 FGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAE 319

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A EL+  M   G K ++ +  +LI G CK+ +++ A  L   MLS  ++  V  YN L  
Sbjct: 320 AVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALIS 379

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-CE 302
           G      + +AFK+   M+ +G   D   Y   ++  C  G I EA +L   + +     
Sbjct: 380 GFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVN 439

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  SY+ ++ GLCK+ +L  A+             D+V+ NI+I A C   K+  A  L
Sbjct: 440 PDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKL 499

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
           F +M  KG+  D V + TL+ G
Sbjct: 500 FKEMGYKGIQADAVTYGTLING 521



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++   G +P+++    LI GLC++     A  L   M++ N E  V       
Sbjct: 319 EAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNV------C 372

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +I G  + G ++KA +++  M+     PDVVTYN  +  +C      EA++L  EM
Sbjct: 373 IYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEM 432

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              G V P+  +++ ++  LCK  +++ A   +   +++G   +    N L+D FC   +
Sbjct: 433 EMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKK 492

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A +LF  M   G + +  +Y  LING         A  ++ +ML   + P V  YN 
Sbjct: 493 VSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNI 552

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +  Q E+A K+F +M +  V+ D   + T I  L K    +EA++LFR +    
Sbjct: 553 MLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARG 612

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
            E D  ++  LI GL + G+   A+E++  +    +I D
Sbjct: 613 IEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILD 651



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           E L +++ + +      Y  ++ G+  A   +     F EM+  G +   V ++  +  L
Sbjct: 147 EFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVL 206

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
            KN   +   +   + +  G    +F Y+  +   C + R+   + L   M+  GC  ++
Sbjct: 207 VKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDI 266

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           ++ +I ++  CK+  +  AL     M  +G  P VVTY T+   L +  Q   A +L++E
Sbjct: 267 WACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEE 326

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M R G+  D  A    I GLCK+  + EA EL   +  L  EL++  Y+ LI G  +SG 
Sbjct: 327 MVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGS 386

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA-PDCVAFN 379
           +  A+++   +       DVVTYNI ++  C  G + +A  L  +ME  G+  PD  ++N
Sbjct: 387 INKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYN 446

Query: 380 TLMLGCIRNNETSK 393
            ++ G  + ++  +
Sbjct: 447 QMLKGLCKAHQLDR 460



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 156/355 (43%), Gaps = 6/355 (1%)

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
            +G    +  P  +    +I  + + G    + EL L+    +++P VV  N V+R    
Sbjct: 48  ASGRLSKLFWPARMHVADVIGRVLERGQSLDSVELELERLHVDLDPFVV--NRVLRSI-- 103

Query: 108 ANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
            +DS  A R +     + G        + ++  L  +      S+ LE +   GV  +  
Sbjct: 104 -SDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRS 162

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  L+ G+   G+ +     F  M + GC+     Y+  I    KN   +     YS  
Sbjct: 163 LYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVA 222

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L KG   T  TY+     L +  ++E   +L  +M + G   D WA   ++D LCK+  +
Sbjct: 223 LDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRL 282

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +AL+    + I     D+ +Y+ ++  LC + +   A EL+  + R  L  D+V   ++
Sbjct: 283 HDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVL 342

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           I  LC   K+D+A +L L M +  +  +   +N L+ G +R+   +K  +++  M
Sbjct: 343 IFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVM 397



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 100/173 (57%), Gaps = 6/173 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   G + + +TY TLINGL   G+  +A  +FE+M+       VV  P+  +
Sbjct: 496 ALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKAR----VV--PNVNL 549

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++  LCK G  ++A+++ LQM  K ++PD++T+N++I      + + EA  LF +M 
Sbjct: 550 YNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMT 609

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            +G++P+ +TF  ++  L + GK  +A ++ E M++ G+  +  V + L+  F
Sbjct: 610 ARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDVSDRLISMF 662


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 209/405 (51%), Gaps = 7/405 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A     ++   G E N++ Y  ++NG C  G T  A  + + +  G G       P+ 
Sbjct: 260 VHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSL-PGRG-----FSPNI 313

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V YT ++ G C E  +++A+ ++ ++ K+K +  D   + +VI G+C      +A RL  
Sbjct: 314 VTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLN 373

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+D  +Q N+  ++++++  CK G+M EA  +L  M  +GVRP+ + YN+L+DG+C  G
Sbjct: 374 EMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKG 433

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +N+A E + +M   G      +Y+ L+ G+C    I+ AL L+  ML KGI P  ++ +
Sbjct: 434 LMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCS 493

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  G F+  + E+A  L+ E    G+A +T  + T I+GLCK   + EA EL   ++  
Sbjct: 494 TLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQW 553

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C  DI +Y  L  G CK G +  A  + + L        +  +N +I       +  K 
Sbjct: 554 RCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKV 613

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D+  +M  +G++P+ VA+  L+ G  +  +      L   M E+
Sbjct: 614 NDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEK 658



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 215/498 (43%), Gaps = 102/498 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA L  ++     + N+  Y+ +ING C+ G  + A N+  EM       GV  +PD  
Sbjct: 367 DAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT------GVGVRPDTY 420

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++DG CK+G ++KA E    M         +TYN++++GFC     ++A RL+  M
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
           + +G+ PN                                     TF+ +++ LCK  +M
Sbjct: 481 LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERM 540

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM------------ 194
            EA +L++ M Q    P+   Y TL  G+C  G ++RA  +   +E++            
Sbjct: 541 PEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSL 600

Query: 195 -----------------------GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
                                  G   N  +Y  LI G+CK  ++  A +LY EM+ KG+
Sbjct: 601 ITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR-------TFID------ 278
            P +   ++L    +   + + A  +   +    +  D  A R        FID      
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 279 -------------GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                        GLCK G I +A  L   L+      D  +YS LI G   SG + +A+
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L  ++    L  ++VTYN +I+ LC  G++ +A  LF  +  KG++P+ + +NTL+   
Sbjct: 781 DLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKH 840

Query: 386 IRNNETSKVVELLHRMDE 403
            ++   ++  +L  RM E
Sbjct: 841 CKDGYITEAFKLKQRMIE 858



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 185/374 (49%), Gaps = 32/374 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+K + C P++ITY TL +G C+ G    A  +  E+ N      +   P   
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELEN------LGFAPTIE 595

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + ++I G        K  ++L +M ++ ++P+ V Y ++I G+C   D + A  L++EM
Sbjct: 596 FFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN----------------- 164
           +++G+ PN+   S ++    + GK +EA+ +L+ ++   + P+                 
Sbjct: 656 IEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDT 715

Query: 165 ---------AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                      ++N ++ G C  GR+  AK L   ++  G   + F+YS LI+G   +  
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A  L   MLS G+ P +VTYN+L  GL +  ++ RA  LF ++   G++ +   Y T
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID  CK+GYI EA +L + +        + +YS LI+GLC  G ++ A +L   +    
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895

Query: 336 LIADVVTYNIMIHA 349
           +  + VTY  +I  
Sbjct: 896 VDPNYVTYWTLIQG 909



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 194/412 (47%), Gaps = 32/412 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ +  A G   N  T++T+INGLC+      A  L ++M          C PD +
Sbjct: 507 KALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR------CPPDII 560

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+  G CK G +D+A  +L ++++    P +  +NS+I G   A    +   +  EM
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM 620

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN V +  ++   CK G +  A  L   MI+ G+ PN F+ ++L+  F   G+ 
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680

Query: 182 NRAKEL-------------------------FVSMESMGCKHNV-FSYSILINGYCKNKE 215
           + A  +                         F+   + G  H+    ++I+I G CK   
Sbjct: 681 DEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGR 740

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           IE A +L +++  KG      TY++L  G      V+ AF L D M   G+  +   Y +
Sbjct: 741 IEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNS 800

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I GLCK+G +  A+ LF+ L       +  +Y+ LID  CK G +  A++L   +    
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           +   V TY+I+I+ LC  G M++A  L   M    V P+ V + TL+ G +R
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 177/361 (49%), Gaps = 5/361 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A  LF  ++    EF       A  +  ++  L   G +D A ++  +M+       + +
Sbjct: 155 APPLFPHLVEVYKEFSF----SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRS 210

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
            NS++       D      +F +M   G  P+  T +++    CK   +  A + +E M 
Sbjct: 211 CNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMT 270

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++GV  N   Y+ +M+G+C  G+ N A+ +  S+   G   N+ +Y++L+ GYC  K +E
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330

Query: 218 GALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  +  E+  +K +      +  +  G  ++ ++E A +L +EM    +  + + Y   
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I+G CK G +VEA  +   +  +    D  SY+ L+DG CK G +  A+E ++++ R   
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
            A  +TYN ++   C+ G +D A  L+  M  KG+AP+ ++ +TL+ G  ++ +T K + 
Sbjct: 451 AATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALN 510

Query: 397 L 397
           L
Sbjct: 511 L 511



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 130/302 (43%), Gaps = 55/302 (18%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------------NGEF--- 52
           G  PN + Y  LI G C+ G    A NL+ EMI                     G+F   
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683

Query: 53  --------GVVCKPD--------------------------AVIYTTIIDGLCKEGFVDK 78
                   G    PD                           +++  +I GLCK G ++ 
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           AK LL  +KDK    D  TY+S+I G   +   + A  L   M+  G+ PN+VT++ ++ 
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCK+G++  A  L + +   G+ PNA  YNTL+D  C  G +  A +L   M   G   
Sbjct: 804 GLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHP 863

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            VF+YSILING C    +E A+ L  +M+   + P  VTY TL  G      V+      
Sbjct: 864 TVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPL 923

Query: 259 DE 260
           D+
Sbjct: 924 DQ 925



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 61/133 (45%)

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           ++   +  L   G +  AL++F  +R L C L +RS + +++ L ++G L     +F  +
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            R   + D  T  IM  A C    +  A +   +M   GV  + VA++ +M G     +T
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 392 SKVVELLHRMDER 404
           +    +L  +  R
Sbjct: 295 NDARRMLDSLPGR 307


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 194/381 (50%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC P+V+TY  L+ GLCRT     A  +           G V + + V
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML----------GRVPEVNVV 317

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +  T+I G   EG + +A EL   M  K   PDV TYN ++ G C       A R+  EM
Sbjct: 318 MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PN+VT+S ++   C+NG  ++A  +L+ M   G   N+  YN ++      G++
Sbjct: 378 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKL 437

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M+S GCK ++ +Y+ +I   C N +++ A  ++  +L +G+    +TYNTL
Sbjct: 438 DEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + +   +L +EM  HG   D  +Y   I  LCK G +  ++ L   +     
Sbjct: 498 IHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGI 557

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ LI+ LCK+G+++ A EL   +    L  D+VTYN +I+ LC  G    A +
Sbjct: 558 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 617

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L   +  + V PD V +N L+
Sbjct: 618 LLEKLPNENVHPDIVTYNILI 638



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 202/404 (50%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC  +V T++ ++ GLC  GH   A  L + M+         C P  V
Sbjct: 233 EAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG------CTPSVV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+    D+A  +L ++ + N    VV  N+VIRG         A  L+  M
Sbjct: 287 TYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARATELYEMM 342

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V T++++M  LCK G+   A ++L+ M + G  PN   Y+TL+  FC  G  
Sbjct: 343 GSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 402

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +   M + G   N   Y+ +I    K+ +++ A+ L  EM S+G KP + TYNT+
Sbjct: 403 DDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTI 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    Q++ A  +F  +   GV A+   Y T I  L  +G   E L L   + +  C
Sbjct: 463 IYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGC 522

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            LD+ SY+ LI  LCK G +  +  L   +    +  +  +YN++I+ LC  GK+  A +
Sbjct: 523 PLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALE 582

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +M  +G+ PD V +NTL+ G  +   T   + LL ++   N
Sbjct: 583 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 174/347 (50%), Gaps = 6/347 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L+  + + GC P+V TY+ L++GLC+ G    A+ + +EM     E G  C P+ V
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM----EEKG--CAPNIV 387

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++   C+ G  D A+ +L QM  K  + +   YN +I         +EA RL  EM
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM 447

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG +P++ T++ I+  LC N +M+EA  +   +++ GV  N   YNTL+     +GR 
Sbjct: 448 KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRW 507

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                L   M   GC  +V SY+ LI   CK   ++ ++ L  EM++KGIKP   +YN L
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNML 567

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A +L  EM   G+  D   Y T I+GLCK G+   AL L   L     
Sbjct: 568 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             DI +Y+ LI   CK   L  A  L      G ++ +  T+ +M+ 
Sbjct: 628 HPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 149/328 (45%), Gaps = 5/328 (1%)

Query: 78  KAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +A  LL QM  +  + P   +YN+V+     A+   +A  L+  M+   V P   TF V 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
              LC+ G+  +A  LL  M + G  P+A +Y T++      G V  A  L   M  MGC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +++ ++ G C    +  A  L   M+  G  P+VVTY  L  GL    Q + A+ 
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +   +    V        T I G    G +  A EL+  +    C  D+ +Y+ L+ GLC
Sbjct: 307 MLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GR   A  +   +       ++VTY+ ++H+ C +G  D A  +   M AKG + +  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N ++    ++ +  + + L+  M  +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQ 450



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 169/395 (42%), Gaps = 36/395 (9%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+L ++M      F V   P    Y  ++  L +      A  L  +M    + P   T
Sbjct: 128 ALHLLDQMPR---RFAVT--PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFT 182

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +    R  C    + +A  L   M   G  P+ V +  ++  L   G + EA+ LL+ M+
Sbjct: 183 FGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML 242

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE-- 215
            +G   +   +N ++ G C  G V  A  L   M   GC  +V +Y  L+ G C+ ++  
Sbjct: 243 LMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQAD 302

Query: 216 --------------------IEGALS---------LYSEMLSKGIKPTVVTYNTLFIGLF 246
                               I G L+         LY  M SKG  P V TYN L  GL 
Sbjct: 303 EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++ +   A ++ DEM+  G A +   Y T +   C+NG   +A  +   +      ++ +
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
            Y+ +I  L K G+L  A  L   +       D+ TYN +I+ LC + +MD+A  +F ++
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +GV  + + +NTL+   + +    + + L + M
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 8/214 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDA 60
           EA  +F  L   G   N ITY+TLI+ L  +G     L L  EM+ +G       C  D 
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG-------CPLDV 526

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LCKEG VD++  LL +M  K I P+  +YN +I   C A    +A  L  E
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++QG+ P++VT++ +++ LCK G    A  LLE +    V P+   YN L+   C    
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           ++ A  L     S G   N  ++ +++  + +  
Sbjct: 647 LDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQP 680



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 74/204 (36%), Gaps = 35/204 (17%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+ +++   +      AL LY  ML   + PT  T+      L  + +   A  L   M
Sbjct: 147 SYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            RHG   D   Y+T I  L   G + EA  L   + ++ C                    
Sbjct: 207 ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA------------------- 247

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
                           ADV T+N ++  LC  G + +A  L   M   G  P  V +  L
Sbjct: 248 ----------------ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFL 291

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R  +  +   +L R+ E N
Sbjct: 292 LRGLCRTRQADEAYAMLGRVPEVN 315


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 212/437 (48%), Gaps = 39/437 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A   F +    G  PN+I ++ +I GLC+ G    A  + EEM+ G G      KP+  
Sbjct: 255 RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV-GRG-----WKPNVY 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +T +IDGLCK+G+ +KA  L L++ + +N  P+V+TY ++I G+C     N A+ L   
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +QG+ PN  T++ ++D  CK G  E A +L+ +M + G  PN   YN ++DG C  GR
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ++  S    G   +  +Y+ILI+ +CK  EI+ AL L+++M+  GI+P + +Y T
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L        +++ +   F+E  R G+      Y + I G C+ G +  AL+ F  +    
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV------------------ 341
           C  D  +Y  LI GLCK  +L  A  L+ ++  +G+   +V                   
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAM 608

Query: 342 -------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
                        T N ++  LC++ K+  A   F  +  K    + V     M  C  +
Sbjct: 609 VVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYES 668

Query: 389 NETSKVVELLHRMDERN 405
           N+   V +L  R+ + N
Sbjct: 669 NKYDLVSDLSARIYKEN 685



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 197/403 (48%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++ A G +PN ++Y  ++ G C+ G+ + +    +  + G  E G V   D   
Sbjct: 186 AENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES----DRWLGGMIERGFVV--DNAT 239

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + I+   C++GFV +A     +  +  + P+++ +  +I G C      +A  +  EM+
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV 299

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV T + ++D LCK G  E+A +L L+L+     +PN   Y  ++ G+C   ++
Sbjct: 300 GRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKM 359

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NRA+ L   M+  G   N  +Y+ LI+G+CK    E A  L + M  +G  P V TYN +
Sbjct: 360 NRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAI 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V+ A+K+     R+G+ AD   Y   I   CK   I +AL LF  +     
Sbjct: 420 VDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGI 479

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI SY+ LI   C+  R+K +   F    R  L+    TY  MI   C +G +  A  
Sbjct: 480 QPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALK 539

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  M   G A D + +  L+ G  + ++  +   L   M E+
Sbjct: 540 FFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEK 582



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 201/403 (49%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++   G  P+  T + ++  +   G    A NLF+EM       GV  +P+ V
Sbjct: 150 EAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCAR----GV--QPNCV 203

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G CK G V ++   L  M ++    D  T + ++R FC       A   F   
Sbjct: 204 SYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRF 263

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN++ F+ +++ LCK G +++A ++LE M+  G +PN + +  L+DG C  G  
Sbjct: 264 CEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWT 323

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +A  LF+ +  S   K NV +Y+ +I+GYC+++++  A  L S M  +G+ P   TY T
Sbjct: 324 EKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTT 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +    ERA++L + M   G + +   Y   +DGLCK G + EA ++ ++     
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  +Y+ LI   CK   +K A  LF+ + +  +  D+ +Y  +I   C + +M ++ 
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             F +    G+ P    + +++ G  R       ++  HRM +
Sbjct: 504 MFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSD 546



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 177/389 (45%), Gaps = 28/389 (7%)

Query: 16  EPNVITYS---TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +PN +T+    T++  L     ++VAL+ F   I  + +F    +    +Y      L  
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFNWAI-ASSKFRHFTR----LYIACAASLIS 124

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
               +KA E++  M               ++ F       EA  + IEM +QG+ P+  T
Sbjct: 125 NKNFEKAHEVMQCM---------------VKSFAEIGRVKEAIEMVIEMHNQGLAPSTKT 169

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            + ++  + + G +E A  L + M   GV+PN   Y  ++ G+C  G V  +      M 
Sbjct: 170 LNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMI 229

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G   +  + S+++  +C+   +  AL  +      G++P ++ +  +  GL +   V+
Sbjct: 230 ERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVK 289

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE---LDIRSYS 309
           +AF++ +EM   G   + + +   IDGLCK G+  +A  LF  L++++ E    ++ +Y+
Sbjct: 290 QAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLF--LKLVRSENHKPNVLTYT 347

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +I G C+  ++  A  L   +    L  +  TY  +I   C  G  ++A++L   M  +
Sbjct: 348 AMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEE 407

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           G +P+   +N ++ G  +     +  ++L
Sbjct: 408 GFSPNVCTYNAIVDGLCKKGRVQEAYKVL 436


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 216/465 (46%), Gaps = 68/465 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF K+ A GCEPN  T+  L+ G CR G     L L  +M       G++  P+ V
Sbjct: 165 DARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRT----MGIL--PNNV 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+I   CKEG    A++L+ +M++  + P V T+NS I   C +    EA R+F +M
Sbjct: 219 LYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDM 278

Query: 122 -MDQGV---QPNVVTFSVIMDELCKNGKMEEASQL------------------------- 152
            +D+ +    PNV+T+ +++   CK G +EEA  L                         
Sbjct: 279 QIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIR 338

Query: 153 ----------LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                     L+ M+ IG+ P+ + YN +MDG C  G ++ A+ L   M   G   +  +
Sbjct: 339 NGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVT 398

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YS L++GYC   ++  A +L  EM+S    P   T N L   L++  ++  A  L  +M 
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFR-----------------------TLRIL 299
             G   DT      I+ LC NG + +A+E+                         T+   
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           KC  D+ +YS +I GLCK+GRL  A + F  +    L  D   Y+  IH+ C +GK+  A
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  DME +G       +N+L+LG    N+  ++  L+  M E+
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 210/439 (47%), Gaps = 60/439 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K++  G  P+V T+++ I+ LC +G  + A  +F +M   + E G+   P+ +
Sbjct: 235 DAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDM-QIDEELGLP-HPNVI 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G CKEG +++AK L+  MK      ++ +YN  + G        EA  +  EM
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P++ +++++MD LCKNG + +A  L+ LMI+ G+ P+   Y+TL+ G+C  G+V
Sbjct: 353 LGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKV 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSIL----------------------------------- 206
             A  L   M S  C  N ++ ++L                                   
Sbjct: 413 FEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNII 472

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-----------------------IKPTVVTYNTLFI 243
           IN  C N +++ A+ + + M + G                         P +VTY+T+  
Sbjct: 473 INALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIIS 532

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL +  +++ A K F EM   G+  D+  Y TFI   C+ G I  A ++ + +    C  
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            +++Y+ LI GL    ++   + L   +    +  DV TYN M++ LC  G+++ A  + 
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652

Query: 364 LDMEAKGVAPDCVAFNTLM 382
            +M  KG++P+  +F  L+
Sbjct: 653 DEMLQKGISPNISSFRILI 671



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 10/360 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P   T++ LI  LC +GH   A  LF++M          C+P+   +  ++ G C+ G  
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMP------ARGCEPNEFTFGILVRGYCRAGLA 198

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            K  ELL QM+   I P+ V YN++I  FC    +++A++L  +M + G+ P+V TF+  
Sbjct: 199 SKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSR 258

Query: 137 MDELCKNGKMEEASQLLELMI---QIGV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +  LC +GK+ EAS++   M    ++G+  PN   Y  ++ GFC  G +  AK L  +M+
Sbjct: 259 ISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMK 318

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                 N+ SY+I + G  +N ++  A  +  EML  GI+P + +YN +  GL +   + 
Sbjct: 319 RNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLS 378

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L   M R+G+  DT  Y T + G C  G + EA  L   +    C  +  + + L+
Sbjct: 379 DARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLL 438

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
             L K GR+  A  L   +       D VT NI+I+ALC +G++DKA ++   M   G A
Sbjct: 439 HSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSA 498



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 204/427 (47%), Gaps = 30/427 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++   G EP++ +Y+ +++GLC+ G    A  L   MI      G++  PD 
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN----GIL--PDT 396

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++ G C +G V +A  LL +M   N +P+  T N ++         +EA+ L  +
Sbjct: 397 VTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQK 456

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV------------------- 161
           M ++G   + VT ++I++ LC NG++++A +++  M   G                    
Sbjct: 457 MNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTIS 516

Query: 162 ----RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+   Y+T++ G C  GR++ AK+ F+ M S G + +   Y   I+ +C+  +I 
Sbjct: 517 GKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKIS 576

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  +M  +G   T+ TYN+L +GL   +Q+   + L DEM+  GV+ D   Y   +
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LC+ G I +A  +   +       +I S+  LI   CK+   K + E+F  +   V  
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE-IALNVCG 695

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
                Y +M + L   GK+ +A +LF     +        +  L+    ++ +     ++
Sbjct: 696 HKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDV 755

Query: 398 LHRMDER 404
           LHR+ ++
Sbjct: 756 LHRLIDK 762



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 183/352 (51%), Gaps = 4/352 (1%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P   +Y  ++    +E  V+    L   M    ++P+  T+N +I   C +    +A+ 
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M  +G +PN  TF +++   C+ G   +  +LL  M  +G+ PN  +YNTL+  FC
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIK- 232
             G+ + A++L   M   G   +V +++  I+  C + +I  A  ++ +M      G+  
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+TY  + +G  +   +E A  L D M+R+    +  +Y  ++ GL +NG ++EA  +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + +  +  E DI SY+ ++DGLCK+G L  A  L   + R  ++ D VTY+ ++H  C+
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            GK+ +A++L  +M +   +P+    N L+    +    S+   LL +M+E+
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK 460



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 32/409 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +K      N+ +Y+  + GL R G  + A  + +EM+      G+  +PD  
Sbjct: 309 EAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEML------GIGIEPDIY 362

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DGLCK G +  A+ L+  M    I PD VTY++++ G+C      EA  L  EM
Sbjct: 363 SYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEM 422

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN  T +V++  L K G++ EA  LL+ M + G   +    N +++  C  G++
Sbjct: 423 ISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQL 482

Query: 182 NRAKELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIEG 218
           ++A E+   M + G                       C  ++ +YS +I+G CK   ++ 
Sbjct: 483 DKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDD 542

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A   + EM+SKG++P    Y+T         ++  AF++  +M++ G       Y + I 
Sbjct: 543 AKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLIL 602

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GL     I E   L   +R      D+ +Y+ +++ LC+ GR+  A  +   + +  +  
Sbjct: 603 GLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISP 662

Query: 339 DVVTYNIMIHALCADGKMDKAHDLF---LDMEAKGVAPDCVAFNTLMLG 384
           ++ ++ I+I A C       +H++F   L++     A   + FN L++G
Sbjct: 663 NISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVG 711



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 10/344 (2%)

Query: 70  LCKEGFVDKA----KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           L K GF +KA    K L     +K   P +  YN +++     N       L+ +M+   
Sbjct: 85  LAKSGFFNKAISHFKSLRSNFPEKQ--PSIYLYNVLLKSCIRENRVELVSWLYKDMVLAR 142

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P   TF++++  LC +G +E+A +L + M   G  PN F +  L+ G+C  G  ++  
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGL 202

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M +MG   N   Y+ LI+ +CK  +   A  L  +M   G+ P V T+N+    L
Sbjct: 203 ELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISAL 262

Query: 246 FEIHQVERAFKLFDEMQ---RHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               ++  A ++F +MQ     G+   +   Y+  + G CK G + EA  L  T++    
Sbjct: 263 CGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +++ SY+  + GL ++G+L  AW +   +    +  D+ +YNI++  LC +G +  A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L   M   G+ PD V ++TL+ G     +  +   LLH M   N
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 24/346 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---------GNGEF 52
           EA  L  K+   G   + +T + +IN LC  G    A+ +   M           GN   
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508

Query: 53  GVV--------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
           G+V        C PD V Y+TII GLCK G +D AK+  ++M  K + PD   Y++ I  
Sbjct: 509 GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           FC     + A ++  +M  +G    + T++ ++  L    ++ E   L++ M + GV P+
Sbjct: 569 FCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPD 628

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN +++  C  GR+N A  +   M   G   N+ S+ ILI  +CK  + + +  ++ 
Sbjct: 629 VCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE 688

Query: 225 EMLSK-GIKPTVVT--YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
             L+  G K  + T  +N L +G     +V  A +LF+           + Y+  ID LC
Sbjct: 689 IALNVCGHKEALYTLMFNELLVG----GKVAEAKELFETALDRSFDIGNFLYKDLIDRLC 744

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
           K+  +  A ++   L     + D  S+  +IDG  K G   +A EL
Sbjct: 745 KDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADEL 790



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 133/281 (47%), Gaps = 40/281 (14%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+++TYST+I+GLC+ G    A   F EM++         +PD+ IY T I   C+EG
Sbjct: 520 CTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG------LQPDSAIYDTFIHSFCREG 573

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +  A ++L  M+ +  N  + TYNS+I G    N   E   L  EM ++GV P+V T++
Sbjct: 574 KISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYN 633

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC------------------ 176
            +++ LC+ G++ +A  +L+ M+Q G+ PN   +  L+  FC                  
Sbjct: 634 HMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV 693

Query: 177 ----------------LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                           + G+V  AKELF +          F Y  LI+  CK++++E A 
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAAS 753

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            +   ++ KG +    ++  +  G  ++     A +L + M
Sbjct: 754 DVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 40/231 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  GC   + TY++LI GL           L +EM     E GV   PD   
Sbjct: 578 AFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEM----REKGV--SPDVCT 631

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN---------- 112
           Y  +++ LC+ G ++ A  +L +M  K I+P++ ++  +I+ FC A D            
Sbjct: 632 YNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIAL 691

Query: 113 ------------------------EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
                                   EAK LF   +D+        +  ++D LCK+ K+E 
Sbjct: 692 NVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEA 751

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           AS +L  +I  G + +   +  ++DGF   G  + A EL   M  M  + N
Sbjct: 752 ASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 207/393 (52%), Gaps = 10/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A + +L   G  P    ++ L+  L R G    A N+F+EM +     GV  +   V
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVV 152

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G+C+ G +D A+ L  +M +  + PDV TY ++I+G C      +A+ +F +M
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN V F++++D  CK G  E   +L   M + GVRP+A  YN +++G C    +
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  + V M S G + +  +Y+ LI+GYCK +E++ A+ +   M+++G+    VTY  L
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A ++  EM   G+  D   Y   ID  C+ G +   L L + ++    
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ +++G CK G++K A  L +++    +  D +TYNI++   C  GK+    +
Sbjct: 393 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 452

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           L     AKG  PD   + T ++G I   +T+K 
Sbjct: 453 L---KSAKGTVPDLGVY-TSIVGEIVKKKTTKT 481



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 175/340 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+A ++  ++  L + G +  A+ +  +M+ + +   VV++N++I G C A D + A+ L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M + GV P+V T+  ++  LC+ G++E+A  + E M   G++PNA V+  L+D  C 
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G      EL   M   G + +  +Y+ ++NG C+ ++++ A  +  EM S G++P  VT
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G  +  +++ A ++   M   GV  D   Y   I GL K G   +A  +   + 
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E D  +Y+ +ID  C+ G +K    L   +        VVTYN++++  C  G+M 
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            A  L   M   GV+PD + +N L+ G  ++ + + + EL
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 453



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 3/334 (0%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +EG +  A  L+L    + I  +  +   ++  F  A    EA   +++++D G+ P   
Sbjct: 61  EEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAP---EACAFYLQLLDAGLPPEAK 117

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            F+V+M +L + G++  A  + + M   GVR     +NT++ G C  G ++ A+ L   M
Sbjct: 118 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 177

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   +V++Y  LI G C+   IE A  ++ +M  +G+KP  V +  L     +    
Sbjct: 178 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E   +L  EM+  GV  D   Y   ++GLC+   +  A  +   +R      D  +Y+ L
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDG CK   L +A E+  ++    +  D VTY  +I  L   G+   A  +  +M   G+
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 357

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            PD   +  ++    R  +    + LL  M  + 
Sbjct: 358 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 391


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 211/408 (51%), Gaps = 16/408 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------- 52
           A  LF  + A GC PNVITY+ LI+G C++G+   A  ++  M  G+ +           
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIK 636

Query: 53  -GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
             V  KP+ V Y  ++DGLCK   V  A++LL  M      P+ + Y+++I GFC A   
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M+++G  PNV T+S ++D L K+ +++   ++L  M++    PN  +Y  +
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG     + + A +L + ME  GCK NV +Y+ +I+G+ K  +++  L L+ EM SKG 
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A+ L +EM++        +Y   I+G  K  +I+ +L 
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLG 874

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG--VLIADVVTYNIMIHA 349
           L   +        I  Y  LID   K+GRL++A EL   +      + A    Y  +I++
Sbjct: 875 LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYS 934

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
                K+D A +LF DM   GV PD   F  L++G IR     + ++L
Sbjct: 935 FSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 196/420 (46%), Gaps = 20/420 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPDA 60
           A  L  K++   C+P  + Y+ LI  +C  G     V   L E+  N     G V     
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+  +    LC  G  +KA +++ +M      PD  TY+ VI   C A+    A  LF E
Sbjct: 457 VV--SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P+V T+++++D   K G +++A   L+ M++ G  P    Y TL+  +    +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           V+ A ELF  M + GC  NV +Y+ LI+GYCK+  IE A  +Y+ M              
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  KP VVTY  L  GL + H+V+ A  L + M   G   +T  Y   IDG CK  
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA E+F  +       ++ +YS LID L K  RL +  ++   +       ++V Y 
Sbjct: 695 KLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            MI  L    K D+A+ L L ME KG  P+ V +  ++ G  +  +  K +EL   M  +
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 197/426 (46%), Gaps = 28/426 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++++  C PNV TY  L+ G C     +        M+   G     C P   
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKKQLGRCKRILSMMIAEG-----CYPSYT 379

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND------SNEAK 115
           I+ +++   CK      A +LL +M+     P  V YN +I   C   +         A+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           + + EM+  G   N V        LC  GK E+A +++  M+  G  P+   Y+ ++   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   RV  A  LF  M+  G   +V++Y+ILI+ + K   I+ A +   EM+  G +PTV
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTY TL     +  +V  A +LF+ M   G   +   Y   IDG CK+G I +A +++  
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 296 LR----ILKCEL------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           +R    I   ++            ++ +Y  L+DGLCK+ ++K A +L  ++       +
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            + Y+ +I   C   K+D+A ++F  M  +G  P+   +++L+    ++     V+++L 
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLS 739

Query: 400 RMDERN 405
           +M E +
Sbjct: 740 KMLENS 745



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 181/402 (45%), Gaps = 21/402 (5%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK FG +P  +TY+ L+    R      A  +  EM     E G+    D         
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM----SELGL--SMDEFTLGFFAQ 284

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ ++  P+ + YN +I G C A+   EA      M      P
Sbjct: 285 ALCKVG---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV T+ +++       ++    ++L +MI  G  P+  ++N+L+  +C +   + A +L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------YSEMLSKGI---KPTVVTYN 239
             ME   CK     Y+ILI   C   E+ G ++       Y+EMLS G    K  VV++ 
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
               G     + E+A+K+  EM  +G   DT  Y   I  LC    +  A  LF+ ++  
Sbjct: 462 RCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ +Y+ LID   K+G +K A      + R      VVTY  +IHA     K+  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++LF  M AKG  P+ + +  L+ G  ++    K  ++  RM
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 153/329 (46%), Gaps = 49/329 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------------------ 55
           GCEPN I Y  LI+G C+      A  +F +M+       V                   
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734

Query: 56  -----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                      C P+ VIYT +IDGL K    D+A +L+L M++K   P+VVTY ++I G
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           F  A   ++   LF EM  +G  PN VT++V+++  C  G ++EA  LLE M Q     +
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSM------ESMGCKHNVFSYSILINGYCKNKEIEG 218
              Y  +++G+         +E  +S+      E  G    +  Y +LI+ + K   +E 
Sbjct: 855 VSSYCKVIEGY--------KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEV 906

Query: 219 ALSLYSEMLSKGIKPTVVT--YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           AL L+ E++S  +  T     Y +L        +++ AF+LF +M R GV  D   +   
Sbjct: 907 ALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHL 966

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDI 305
           + GL +     EAL+L  +L    C++DI
Sbjct: 967 LMGLIRVRRWEEALQLSDSL----CQMDI 991



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 28/335 (8%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I   C+ G  + A E L ++KD    P  +TYN++++ F  A+  + A+ +  EM + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  +  T       LCK GK  EA  L+E   +    PN  +YN ++ G C       A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +    M S  C  NV +Y IL+ G    K++     + S M+++G  P+   +N+L    
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +      A+KL  +M++         Y   I  +C  G +   +           EL  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF---------ELAE 439

Query: 306 RSYSCLIDG---------------LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ++Y+ ++                 LC  G+ + A+++ H +     + D  TY+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           C   +++ A  LF +M+  GV PD   + T+++ C
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTY-TILIDC 533



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 55/267 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++  GC+PNV+TY+ +I+G  + G     L LF EM    G  G  C P+ V
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM----GSKG--CAPNFV 821

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI-- 119
            YT +I+  C  G +D+A  LL +MK       V +Y  VI G+         KR FI  
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY---------KREFILS 872

Query: 120 -----EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                E+   G  P ++ + V++D   K G++E A +L                      
Sbjct: 873 LGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALEL---------------------- 910

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                     KE+  +  SM  K N+  Y+ LI  +    +I+ A  L+ +M+  G+ P 
Sbjct: 911 ---------HKEVISASMSMTAKKNL--YTSLIYSFSYASKIDHAFELFYDMIRDGVIPD 959

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + T+  L +GL  + + E A +L D +
Sbjct: 960 LGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 7/248 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS--YSILINGYCKNKE 215
           QIG      VY  L+D F   G  +R  E F+  E  G    V     ++LI   C+N  
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL     +   G KPT +TYN L        +++ A  +  EM   G++ D +    
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           F   LCK G   EAL L      +   +    Y+ +I GLC++   + A +  + +    
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTI---LYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I +V TY I++       ++ +   +   M A+G  P    FN+L+    ++++ S   
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 396 ELLHRMDE 403
           +LL +M++
Sbjct: 399 KLLKKMEK 406


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 204/392 (52%), Gaps = 6/392 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++ + G +PNV  Y+  I  LCR      A  +FE M     + GV+  P+   Y+ 
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM----KKHGVL--PNLYTYSA 274

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK G V +A  L  ++    + P+VV + +++ GFC A +   A+ LF+ M+  G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN+  ++ ++   CK+G M EA  LL  M  + + P+ F Y  L++G C+  +V  A 
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  M++     +  +Y+ LI+GYCK   +E AL L SEM + G++P ++T++TL  G 
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             +  ++ A  L+ EM   G+  D   Y   ID   K   + EAL L+  +       + 
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++CL+DG  K GRL +A + +    +     + V +  +I  LC +G + +A   F D
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           M + G+ PD  ++ +++ G ++    +  + L
Sbjct: 575 MRSCGITPDICSYVSMLKGHLQEKRITDTMML 606



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 198/373 (53%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +K  G  PN+ TYS +I+G C+TG+   A  L++E++           P+ V
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE------LLPNVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ T++DG CK   +  A+ L + M    ++P++  YN +I G C + +  EA  L  EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V T++++++ LC   ++ EA++L + M    + P++  YN+L+ G+C    +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M + G + N+ ++S LI+GYC  ++I+ A+ LY EM  KGI P VVTY  L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+   ++ A +L+ +M   G+  +   +   +DG  K G +  A++ ++     + 
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +   ++CLI+GLC++G +  A   F  +    +  D+ +Y  M+     + ++     
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605

Query: 362 LFLDMEAKGVAPD 374
           L  DM   G+ P+
Sbjct: 606 LQCDMIKTGILPN 618



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 193/394 (48%), Gaps = 6/394 (1%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +   C P+     +++NGL R          ++ MI+     G+V  PD  IY  +    
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
            K+G   K ++LL +M    I P+V  Y   I   C  N   EA+++F  M   GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            T+S ++D  CK G + +A  L + ++   + PN  V+ TL+DGFC    +  A+ LFV 
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G   N++ Y+ LI+G+CK+  +  A+ L SEM S  + P V TY  L  GL    Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V  A +LF +M+   +   +  Y + I G CK   + +AL+L   +     E +I ++S 
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LIDG C    +K A  L+  +    ++ DVVTY  +I A   +  M +A  L+ DM   G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + P+   F  L+ G  +    S  ++     +++
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 6/298 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L +++++    P+V TY+ LINGLC       A  LF++M N          P +
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSS 409

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y ++I G CKE  +++A +L  +M    + P+++T++++I G+C   D   A  L+ E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P+VVT++ ++D   K   M+EA +L   M++ G+ PN   +  L+DGF   GR
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A + +          N   ++ LI G C+N  I  A   +S+M S GI P + +Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           +  G  +  ++     L  +M + G+  +    +        NGY+  A  L  + R+
Sbjct: 590 MLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 39/300 (13%)

Query: 107 YANDSNEAKRLFIEMMD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           ++  SN + RLF  + D Q  + ++  FS+++ E  + G  EEA                
Sbjct: 108 HSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEA---------------- 151

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
                                L+VS E M C  +  +   ++NG  + +  +     Y  
Sbjct: 152 ---------------------LWVSRE-MKCSPDSKACLSILNGLVRRRRFDSVWVDYQL 189

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+S+G+ P V  Y  LF   F+     +  KL DEM   G+  + + Y  +I  LC++  
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EA ++F  ++      ++ +YS +IDG CK+G ++ A+ L+  +    L+ +VV +  
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++   C   ++  A  LF+ M   GV P+   +N L+ G  ++    + V LL  M+  N
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 195/381 (51%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC P+V+TY  L+ GLCRT     A  +           G + + + V
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML----------GRLPEVNVV 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +  T+I G   EG + +A EL   M  K   PDV TY+ ++ G C       A R+  EM
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PN+VT+S ++   C+NG  ++A  +L+ M+  G   N+  YN ++   C  G++
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL 434

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  L   M+S GCK ++ +Y+ +I   C N  +E A  ++  ++ +G+    +TYNTL
Sbjct: 435 DQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTL 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + +   +L  EM  HG   D  +Y   I  LCK G +  ++ L   +     
Sbjct: 495 IHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ LI+ LCK+G+++ A EL   +    L  D+VTYN +I+ LC  G    A +
Sbjct: 555 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 614

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L   +  + V PD V +N L+
Sbjct: 615 LLEKLPNENVHPDIVTYNILI 635



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 10/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC  +V T++ L+ GLC  G    A  L + M+         C P  V
Sbjct: 230 EAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG------CMPSVV 283

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC+    D+A  +L ++ + N    VV  N+VIRG         A  L+  M
Sbjct: 284 TYGFLLQGLCRTRQADEACAMLGRLPEVN----VVMLNTVIRGCLTEGKLARATELYEMM 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V T+S++M  LCK G+   A ++L+ M + G  PN   Y+TL+  FC  G  
Sbjct: 340 GSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 399

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +   M + G   N   Y+ +I   CK+ +++ A  L  EM S+G KP + TYNT+
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     +E A  +F  +   GV A+   Y T I  L +NG   E L L   + +  C
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD+ SY+ LI  LCK G +  +  L   +    +  +  +YN++I+ LC  GK+  A +
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           L  +M  +G+ PD V +NTL+ G  +   T   + LL ++   N
Sbjct: 580 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 175/347 (50%), Gaps = 6/347 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L+  + + GC P+V TYS L++GLC+ G    A+ + +EM     E G  C P+ V
Sbjct: 331 RATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM----EEKG--CAPNIV 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++   C+ G  D A+ +L QM  K  + +   YN +I   C     ++A RL  EM
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG +P++ T++ ++  LC N  MEEA  +   +I+ GV  N   YNTL+      GR 
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                L   M   GC+ +V SY+ LI   CK   ++ +++L  EM++KGIKP   +YN L
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +V  A +L  EM   G+  D   Y T I+GLCK G+   AL L   L     
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
             DI +Y+ LI   CK   L  A  L      G ++ +  T+ +M+ 
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 171/395 (43%), Gaps = 36/395 (9%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL+L ++M      F V   P    Y  ++  L +      A  L  +M    + P   T
Sbjct: 125 ALHLLDQMPR---RFAV--SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFT 179

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +    R  C    + +A  L   M   G  P+ V +  ++  L   G + EA+ LL+ M+
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE-- 215
            +G   +   +N L+ G C  GRV  A  L   M + GC  +V +Y  L+ G C+ ++  
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299

Query: 216 -------------------------IEGALS----LYSEMLSKGIKPTVVTYNTLFIGLF 246
                                     EG L+    LY  M SKG  P V TY+ L  GL 
Sbjct: 300 EACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++ +   A ++ DEM+  G A +   Y T +   C+NG   +A  +   +      ++ +
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
            Y+ +I  LCK G+L  A  L   +       D+ TYN MI+ LC +  M++A  +F ++
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +GV  + + +NTL+   +RN    + + L   M
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEM 514



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 149/328 (45%), Gaps = 5/328 (1%)

Query: 78  KAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +A  LL QM  +  ++P   +YN V+     A+   +A  L+  M+   V P   TF V 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
              LC+ G+  +A  LL  M + G  P+A +Y T++      G V  A  L   M  MGC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +++ L+ G C    +  A  L   M+++G  P+VVTY  L  GL    Q + A  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +   +    V        T I G    G +  A EL+  +    C  D+ +YS L+ GLC
Sbjct: 304 MLGRLPEVNVV----MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GR   A  +   +       ++VTY+ ++H+ C +G  D A  +   M AKG + +  
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N ++    ++ +  +   L+  M  +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQ 447



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 7/218 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  L   G   N ITY+TLI+ L R G     L L  EM+         C+ D +
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG------CQLDVI 524

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCKEG VD++  LL +M  K I P+  +YN +I   C A    +A  L  EM
Sbjct: 525 SYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 584

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+ P++VT++ +++ LCK G    A  LLE +    V P+   YN L+   C    +
Sbjct: 585 LNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLL 644

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK-EIEG 218
           + A  L     S G   N  ++ +++  + +    +EG
Sbjct: 645 DDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 35/204 (17%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+++++   +      AL LY  ML   + PT  T+      L  + +   A  L   M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            RHG   D   Y+T I  L   G + EA  L   + ++ C                    
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA------------------- 244

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
                           ADV T+N ++  LC  G++ +A  L   M  +G  P  V +  L
Sbjct: 245 ----------------ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFL 288

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R  +  +   +L R+ E N
Sbjct: 289 LQGLCRTRQADEACAMLGRLPEVN 312


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 210/424 (49%), Gaps = 25/424 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----------ING--- 48
           A  LF K+   G   +V++Y+TLI GLC  G    A+ LF EM           + G   
Sbjct: 29  ARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCN 88

Query: 49  --NGEFGVV---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
              GE G++          +P    Y  ++D  C+E    +A+E+L +M +K + P VVT
Sbjct: 89  AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 148

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
             +VI  +C     ++A R+   M  +G +PNV T++ ++   C  GK+ +A  LL  M 
Sbjct: 149 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 208

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GV P+A  YN L+ G C+ G +  A  L   ME  G   + ++Y+ LIN  CK+   +
Sbjct: 209 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 268

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  + ++GIKP  VT+N+L  GL +  + + A+K  ++M   G   DT+ Y +FI
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LCK     E L     +     +    +Y+ +I  L K     +    +  +      
Sbjct: 329 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 388

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVVTY   + A C +G++++A ++ ++M   GV  D +A+NTLM G     +T   V +
Sbjct: 389 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 448

Query: 398 LHRM 401
           L +M
Sbjct: 449 LKQM 452



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 193/370 (52%), Gaps = 12/370 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCK 72
           G  P+  T+++LI G CRT    VA +LF++M + G  +       D V Y T+I+GLC+
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-------DVVSYATLIEGLCE 57

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G +D+A EL  +M      PD+  Y ++++G C A    E   +   M + G +P+   
Sbjct: 58  AGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 113

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D  C+  K +EA ++L+ M + G+ P       +++ +C  GR++ A  +   M+
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GCK NV++Y+ L+ G+C   ++  A++L ++M + G+ P  VTYN L  G      +E
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+L   M+  G+ AD + Y   I+ LCK+G   +A  LF +L     + +  +++ LI
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCKSG+  IAW+    +       D  TY+  I  LC      +      +M  K V 
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353

Query: 373 PDCVAFNTLM 382
           P  V +  ++
Sbjct: 354 PSTVNYTIVI 363



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 49/452 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL---------------FEEMI 46
           +A  L  K++A G  P+ +TY+ LI G C  GH   A  L               +  +I
Sbjct: 199 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 258

Query: 47  NG---NGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           N    +G     C           KP+AV + ++I+GLCK G  D A + L +M      
Sbjct: 259 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 318

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  TY+S I   C    S E      EM+ + V+P+ V +++++ +L K       ++ 
Sbjct: 319 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 378

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M+  G  P+   Y T M  +C+ GR+N A+ + + M   G   +  +Y+ L++G+  
Sbjct: 379 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 438

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE-----------------RAF 255
             + + A+S+  +M S    P   TY  L   L  +  VE                   F
Sbjct: 439 IGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVF 498

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LFD M+++    ++  Y + ++G  ++G   EA  L   ++     L+   Y+ L+   
Sbjct: 499 GLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 558

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA ++F++   K  +PD 
Sbjct: 559 CKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 618

Query: 376 VAFNTLMLGCIRNNETS---KVVELLHRMDER 404
           + +  ++ G I+   +    +++ +L RM+ R
Sbjct: 619 IVWKVIIDGLIKKGHSDISREMIIMLERMNCR 650



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 8/350 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +  ++   G  P V+T + +IN  C+ G    AL + E M + G       CKP+ 
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG-------CKPNV 181

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G C EG V KA  LL +M+   +NPD VTYN +IRG C       A RL   
Sbjct: 182 WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 241

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +  T++ +++ LCK+G+ ++A  L + +   G++PNA  +N+L++G C +G+
Sbjct: 242 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 301

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP+ V Y  
Sbjct: 302 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 361

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +        + + EM   G   D   Y T +   C  G + EA  +   +    
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             +D  +Y+ L+DG    G+   A  +   +     + +  TY I++  L
Sbjct: 422 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 471



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 163/309 (52%), Gaps = 4/309 (1%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  T+NS+I G+C  N  + A+ LF +M  +G   +VV+++ +++ LC+ G+++EA +L
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M Q    P+  +Y  L+ G C   R      +   M+ +G + +  +Y+ +++  C+
Sbjct: 68  FGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            ++ + A  +  EM  KG+ P VVT   +     +  ++  A ++ + M+  G   + W 
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   + G C  G + +A+ L   +R      D  +Y+ LI G C  G ++ A+ L   + 
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              LIAD  TYN +I+ALC DG+ D+A  LF  +E +G+ P+ V FN+L+ G  ++ +  
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 393 KVVELLHRM 401
              + L +M
Sbjct: 304 IAWKFLEKM 312



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 183/396 (46%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +  ++K  G  P+   Y+ +++  CR      A  + +EM     E G+   P  V
Sbjct: 94  EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF----EKGLA--PCVV 147

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I+  CKEG +  A  +L  MK +   P+V TYN++++GFC     ++A  L  +M
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+ VT+++++   C +G +E A +LL LM   G+  + + YN L++  C  GR 
Sbjct: 208 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF S+E+ G K N  +++ LING CK+ + + A     +M+S G  P   TY++ 
Sbjct: 268 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L ++   +       EM +  V   T  Y   I  L K          +  +    C
Sbjct: 328 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+  +   C  GRL  A  +   + +  +  D + YN ++    + G+ D A  
Sbjct: 388 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 447

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +   M +    P+   +  L+   +R      V+ L
Sbjct: 448 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 483



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 160/401 (39%), Gaps = 93/401 (23%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF  L+  G +PN +T+++LINGLC++G   +A    E+M++        C PD  
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTY 322

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------------ 91
            Y++ I+ LCK     +    + +M  K++                              
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 92  -----NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                NPDVVTY + +R +C     NEA+ + +EM   GV  + + ++ +MD     G+ 
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 147 EEASQLLELMIQIGVRPNAFVY-------------------------------------- 168
           + A  +L+ M  +   PN F Y                                      
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502

Query: 169 --------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
                         +++++GF   GR   A  L   M+      N   Y+ L+  +CK+K
Sbjct: 503 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
               A  L   M+  G  P +++Y  L  GL    Q ++A ++F   +    + D   ++
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 622

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
             IDGL K G+   + E+   L  + C    ++Y+ L + L
Sbjct: 623 VIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 133/284 (46%), Gaps = 4/284 (1%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +P+  TF+ ++   C+  +++ A  L + M   G   +   Y TL++G C  GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A ELF  M+    + ++  Y+ L+ G C  +  E  L +   M   G +P+   Y  
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +        + + A ++  EM   G+A         I+  CK G + +AL +   +++  
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ ++ +Y+ L+ G C  G++  A  L + +    +  D VTYN++I   C DG ++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L   ME  G+  D   +N L+    ++  T +   L   ++ R
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 280



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   G  P +++Y  L++GL   G T  A  +F  M +   ++     PD 
Sbjct: 565 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 618

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           +++  IIDGL K+G  D ++E+++ ++  N  P   TY
Sbjct: 619 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 656


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 205/393 (52%), Gaps = 10/393 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A + +L   G  P    ++ L+  L R G    A N+F+EM +      VV      
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS----- 277

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G+C+ G +D A+ L  +M +  + PDV TY ++I+G C      +A+ +F +M
Sbjct: 278 -FNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN V F++++D  CK G  E   +L   M + GVRP+A  YN +++G C    +
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  + V M S G + +  +Y+ LI+GYCK +E++ A+ +   M+++G+    VTY  L
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A ++  EM   G+  D   Y   ID  C+ G +   L L + ++    
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ +++G CK G++K A  L +++    +  D +TYNI++   C  GK+    +
Sbjct: 517 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 576

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           L     AKG  PD   + ++ +G I   +T+K 
Sbjct: 577 L---KSAKGTVPDLGVYTSI-VGEIVKKKTTKT 605



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 175/340 (51%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+A ++  ++  L + G +  A+ +  +M+ + +   VV++N++I G C A D + A+ L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M + GV P+V T+  ++  LC+ G++E+A  + E M   G++PNA V+  L+D  C 
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G      EL   M   G + +  +Y+ ++NG C+ ++++ A  +  EM S G++P  VT
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G  +  +++ A ++   M   GV  D   Y   I GL K G   +A  +   + 
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E D  +Y+ +ID  C+ G +K    L   +        VVTYN++++  C  G+M 
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            A  L   M   GV+PD + +N L+ G  ++ + + + EL
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 3/335 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
            +EG +  A  L+L    + I  +  +   ++  F  A    EA   +++++D G+ P  
Sbjct: 184 AEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAP---EACAFYLQLLDAGLPPEA 240

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             F+V+M +L + G++  A  + + M   GVR     +NT++ G C  G ++ A+ L   
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G   +V++Y  LI G C+   IE A  ++ +M  +G+KP  V +  L     +   
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            E   +L  EM+  GV  D   Y   ++GLC+   +  A  +   +R      D  +Y+ 
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LIDG CK   L +A E+  ++    +  D VTY  +I  L   G+   A  +  +M   G
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + PD   +  ++    R  +    + LL  M  + 
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 216/423 (51%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP+V T++T+++ LCR G+ + A  LF+    G  + G+   P+A IY T++DG  K 
Sbjct: 312 GVEPSVATFTTILHALCREGNVVEARKLFD----GIQDMGIA--PNAAIYNTLMDGYFKA 365

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------------------- 104
             V +A  L  +M+   ++PD VT+N ++ G                             
Sbjct: 366 REVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLY 425

Query: 105 ------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                  C+A   +EA +L  E++++G+  +VV F+ ++    + G  ++A +   +M++
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P++   N+L+ G C  G +  A+ L   M   G   N  +Y++L++GY K   +EG
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+ EM  +GI P  V +  L  GL +   VE A+++F EM   G   + +AY + I 
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC  G + EAL+L + +R      D  +++ +IDG C+ G++K A E F  + R  L+ 
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+ T+NI+I   C    M  A ++   M + G+ PD   +NT M G  R  + ++ V +L
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725

Query: 399 HRM 401
            ++
Sbjct: 726 DQL 728



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 214/432 (49%), Gaps = 41/432 (9%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L   +  F C P+V+T++ LIN  C  G T VA++    M+    E      P    +T
Sbjct: 268 SLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE------PSVATFT 321

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           TI+  LC+EG V +A++L   ++D  I P+   YN+++ G+  A +  +A  L+ EM   
Sbjct: 322 TILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTT 381

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P+ VTF++++    K G++E++ +LL+ +I  G+  ++ +Y+ ++   C  GR++ A
Sbjct: 382 GVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEA 441

Query: 185 KELFVSMESMGCKHNVFSYSILINGY---------------------------------- 210
            +L   +   G   +V +++ LI  Y                                  
Sbjct: 442 MKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMG 501

Query: 211 -CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C+   ++ A  L   ML KG     V Y  L  G F+++ +E A  L+ EM+  G+  D
Sbjct: 502 LCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPD 561

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
             A+   IDGL K G + EA E+F  +  +    +  +Y+ LI GLC  GR+  A +L  
Sbjct: 562 AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEK 621

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + +  L++D  T+NI+I   C  G+M  A + FLDM+  G+ PD   FN L+ G  +  
Sbjct: 622 EMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681

Query: 390 ETSKVVELLHRM 401
           +     E++++M
Sbjct: 682 DMVGAGEIVNKM 693



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 193/400 (48%), Gaps = 8/400 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  +   G  P+ +T++ +I G CR    +V  +L   M         +C PD V +  
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK------FMCSPDVVTFNI 287

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+  C  G    A + L  M    + P V T+ +++   C   +  EA++LF  + D G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN   ++ +MD   K  ++ +AS L E M   GV P+   +N L+ G    GR+  + 
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   +   G   +   Y ++++  C    ++ A+ L  E+L KG+  +VV +N+L IG 
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSL-IGA 466

Query: 246 FEIHQVE-RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           +    +E +AF+ +  M R G    +    + + GLC+ G++ EA  L   +      ++
Sbjct: 467 YSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPIN 526

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ L+DG  K   L+ A  L+  +    +  D V +  +I  L   G +++A+++FL
Sbjct: 527 KVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFL 586

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M A G  P+  A+N+L+ G       ++ ++L   M ++
Sbjct: 587 EMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK 626



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 176/340 (51%), Gaps = 11/340 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  T ++L+ GLCR G    A  L   M+     F +    + V YT ++DG  K 
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG--FPI----NKVAYTVLLDGYFKM 540

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             ++ A+ L  +MK++ I PD V + ++I G   A +  EA  +F+EM   G  PN   +
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  G++ EA +L + M Q G+  + F +N ++DGFC  G++  A E F+ M+ 
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G   ++F+++ILI GYCK  ++ GA  + ++M S G+ P + TYNT   G   + ++ +
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYSCL 311
           A  + D++   G+  DT  Y T + G+C +   +    +  T ++LK     ++ + + L
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGICSD---ILDRAMILTAKLLKMGFIPNVITTNML 777

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +   CK G  + A      L       D ++Y I+  A C
Sbjct: 778 LSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 170/361 (47%), Gaps = 7/361 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y  +++ LC  G    A+ L +E++       VV       + ++I    + G  DKA E
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA------FNSLIGAYSRAGLEDKAFE 478

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
               M      P   T NS++ G C      EA+ L   M+++G   N V ++V++D   
Sbjct: 479 AYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYF 538

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K   +E A  L + M + G+ P+A  +  L+DG    G V  A E+F+ M ++G   N F
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF 598

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI G C    +  AL L  EM  KG+     T+N +  G     Q++ A + F +M
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDM 658

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           QR G+  D + +   I G CK   +V A E+   +     + DI +Y+  + G C+  ++
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  +   L    ++ D VTYN M+  +C+D  +D+A  L   +   G  P+ +  N L
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNML 777

Query: 382 M 382
           +
Sbjct: 778 L 778



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 182/358 (50%), Gaps = 7/358 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +L   G   +V+ +++LI    R G    A   +  M+           P + 
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG------FTPSSS 493

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              +++ GLC++G++ +A+ LL +M +K    + V Y  ++ G+   N+   A+ L+ EM
Sbjct: 494 TCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEM 553

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+ V F+ ++D L K G +EEA ++   M  IG  PN F YN+L+ G C  GRV
Sbjct: 554 KERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRV 613

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M   G   + F+++I+I+G+C+  +++ A+  + +M   G+ P + T+N L
Sbjct: 614 TEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNIL 673

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A ++ ++M   G+  D   Y T++ G C+   + +A+ +   L     
Sbjct: 674 IGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGI 733

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D  +Y+ ++ G+C S  L  A  L   L +   I +V+T N+++   C  G  +KA
Sbjct: 734 VPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 178/389 (45%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E +    +TL+ G    G    AL +   M       GV  +P     T ++  L + G 
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMR------GVGVRPGLSSITILLRLLLRIGD 227

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
                +L   M  K   P  +T+N++I GFC  +     + L   M      P+VVTF++
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C  G+   A   L LM++ GV P+   + T++   C  G V  A++LF  ++ MG
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N   Y+ L++GY K +E+  A  LY EM + G+ P  VT+N L  G ++  ++E + 
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  ++   G+  D+  Y   +  LC  G + EA++L + L      L + +++ LI   
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAY 467

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            ++G    A+E +  + R        T N ++  LC  G + +A  L   M  KG   + 
Sbjct: 468 SRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINK 527

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           VA+  L+ G  + N       L   M ER
Sbjct: 528 VAYTVLLDGYFKMNNLEGAQFLWKEMKER 556


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 24/413 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------IN 47
           A  LF  + + GC PN++TYS LI+G C+ G    A  +FE M                +
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
            N E     +P+ V Y  ++DG CK   V++A++LL  M  +   P+ + Y+++I G C 
Sbjct: 632 DNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
               +EA+ +  EM + G    + T+S ++D   K  + + AS++L  M++    PN  +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y  ++DG C  G+ + A +L   ME  GC+ NV +Y+ +I+G+    +IE  L L   M 
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SKG+ P  VTY  L     +   ++ A  L +EM++      T  YR  I+G   N   +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFI 864

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNI 345
           E+L L   +        +  Y  LID L K+ RL++A  L   +      L+    TYN 
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I +LC   K++ A  LF +M  KGV P+  +F +L+ G  RN++ S+ + LL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 199/420 (47%), Gaps = 20/420 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA--LNLFEEMINGNGEFGVVCKPDA 60
           A  L  K+   G  P  + Y+ LI  +C    ++    L+L E+  +     GVV   + 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL--NK 448

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +  ++    LC  G  +KA  ++ +M  +   PD  TY+ V+   C A+    A  LF E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +V T+++++D  CK G +E+A +    M ++G  PN   Y  L+  +    +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI-------- 231
           V+ A ELF +M S GC  N+ +YS LI+G+CK  ++E A  ++  M  SK +        
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  +P VVTY  L  G  + H+VE A KL D M   G   +   Y   IDGLCK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA E+   +        + +YS LID   K  R  +A ++   +       +VV Y 
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G     +    +ELL RM  +
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 22/417 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   ++++ A G   N I  S+    LC  G    A ++  EMI G G       PD   
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTST 485

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +++ LC    ++ A  L  +MK   +  DV TY  ++  FC A    +A++ F EM 
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  PNVVT++ ++    K  K+  A++L E M+  G  PN   Y+ L+DG C  G+V 
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605

Query: 183 RAKELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +A ++F  M                +    + NV +Y  L++G+CK+  +E A  L   M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G +P  + Y+ L  GL ++ +++ A ++  EM  HG  A  + Y + ID   K    
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A ++   +    C  ++  Y+ +IDGLCK G+   A++L   +       +VVTY  M
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           I      GK++   +L   M +KGVAP+ V +  L+  C +N        LL  M +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 15/353 (4%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            LC+ G    AL L E       E  V   PD V YT +I GLC+    ++A + L +M+
Sbjct: 279 SLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
             +  P+VVTY++++ G          KR+   MM +G  P+   F+ ++   C +G   
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVF 201
            A +LL+ M++ G  P   VYN L+   C          ++ A++ +  M + G   N  
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + S      C   + E A S+  EM+ +G  P   TY+ +   L    ++E AF LF+EM
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R G+ AD + Y   +D  CK G I +A + F  +R + C  ++ +Y+ LI    K+ ++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             A ELF ++     + ++VTY+ +I   C  G+++KA  +F  M      PD
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 15/399 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK F   P+  TY+ LI    +      A  +  EM   N       + D         
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN------LRMDGFTLRCFAY 278

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ +N  PD V Y  +I G C A+   EA      M      P
Sbjct: 279 SLCKVG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT+S ++       ++    ++L +M+  G  P+  ++N+L+  +C +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE------IEGALSLYSEMLSKGIKPTVVTYNTLF 242
             M   G       Y+ILI   C +K+      ++ A   YSEML+ G+    +  ++  
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    + E+AF +  EM   G   DT  Y   ++ LC    +  A  LF  ++     
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ ++D  CK+G ++ A + F+ +       +VVTY  +IHA     K+  A++L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M ++G  P+ V ++ L+ G  +  +  K  ++  RM
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 157/342 (45%), Gaps = 51/342 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  L   +   GCEPN I Y  LI+GLC+ G    A  +  EM                
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 49  NGEFGV----------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +  F V                 C P+ VIYT +IDGLCK G  D+A +L+  M++K   
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VVTY ++I GF           L   M  +GV PN VT+ V++D  CKNG ++ A  L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF         KE    +ES+G    +           Y
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSVY 885

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +     TYN+L   L   ++VE AF+LF EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + GV  +  ++ + I GL +N  I EAL L   +  + C L
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 987



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 171/433 (39%), Gaps = 52/433 (12%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAVIYTTIIDG 69
           +  G +     Y+ L++ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGE-------FLNVLVRK 209

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C+ G    A E L ++KD    P   TYN +I+ F  A+  + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V YN L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +       D  +YS +++ LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + RG L+ADV TY IM+ + C  G +++A   F +M   G  P+ V +  L+   ++ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 389 NETSKVVELLHRM 401
            + S   EL   M
Sbjct: 567 KKVSYANELFETM 579


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 24/413 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------IN 47
           A  LF  + + GC PN++TYS LI+G C+ G    A  +FE M                +
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
            N E     +P+ V Y  ++DG CK   V++A++LL  M  +   P+ + Y+++I G C 
Sbjct: 632 DNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
               +EA+ +  EM + G    + T+S ++D   K  + + AS++L  M++    PN  +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y  ++DG C  G+ + A +L   ME  GC+ NV +Y+ +I+G+    +IE  L L   M 
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SKG+ P  VTY  L     +   ++ A  L +EM++      T  YR  I+G   N   +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFI 864

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNI 345
           E+L L   +        +  Y  LID L K+ RL++A  L   +      L+    TYN 
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I +LC   K++ A  LF +M  KGV P+  +F +L+ G  RN++ S+ + LL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 199/420 (47%), Gaps = 20/420 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA--LNLFEEMINGNGEFGVVCKPDA 60
           A  L  K+   G  P  + Y+ LI  +C    ++    L+L E+  +     GVV   + 
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL--NK 448

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +  ++    LC  G  +KA  ++ +M  +   PD  TY+ V+   C A+    A  LF E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +V T+++++D  CK G +E+A +    M ++G  PN   Y  L+  +    +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI-------- 231
           V+ A ELF +M S GC  N+ +YS LI+G+CK  ++E A  ++  M  SK +        
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  +P VVTY  L  G  + H+VE A KL D M   G   +   Y   IDGLCK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA E+   +        + +YS LID   K  R  +A ++   +       +VV Y 
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G     +    +ELL RM  +
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 22/417 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   ++++ A G   N I  S+    LC  G    A ++  EMI G G       PD   
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTST 485

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +++ LC    ++ A  L  +MK   +  DV TY  ++  FC A    +A++ F EM 
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  PNVVT++ ++    K  K+  A++L E M+  G  PN   Y+ L+DG C  G+V 
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605

Query: 183 RAKELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +A ++F  M                +    + NV +Y  L++G+CK+  +E A  L   M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G +P  + Y+ L  GL ++ +++ A ++  EM  HG  A  + Y + ID   K    
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A ++   +    C  ++  Y+ +IDGLCK G+   A++L   +       +VVTY  M
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           I      GK++   +L   M +KGVAP+ V +  L+  C +N        LL  M +
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 15/353 (4%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            LC+ G    AL L E       E  V   PD V YT +I GLC+    ++A + L +M+
Sbjct: 279 SLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
             +  P+VVTY++++ G          KR+   MM +G  P+   F+ ++   C +G   
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVF 201
            A +LL+ M++ G  P   VYN L+   C          ++ A++ +  M + G   N  
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + S      C   + E A S+  EM+ +G  P   TY+ +   L    ++E AF LF+EM
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R G+ AD + Y   +D  CK G I +A + F  +R + C  ++ +Y+ LI    K+ ++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             A ELF ++     + ++VTY+ +I   C  G+++KA  +F  M      PD
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 15/399 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK F   P+  TY+ LI    +      A  +  EM   N       + D         
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN------LRMDGFTLRCFAY 278

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ +N  PD V Y  +I G C A+   EA      M      P
Sbjct: 279 SLCKVG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT+S ++       ++    ++L +M+  G  P+  ++N+L+  +C +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE------IEGALSLYSEMLSKGIKPTVVTYNTLF 242
             M   G       Y+ILI   C +K+      ++ A   YSEML+ G+    +  ++  
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    + E+AF +  EM   G   DT  Y   ++ LC    +  A  LF  ++     
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ ++D  CK+G ++ A + F+ +       +VVTY  +IHA     K+  A++L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M ++G  P+ V ++ L+ G  +  +  K  ++  RM
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 153/332 (46%), Gaps = 51/332 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  L   +   GCEPN I Y  LI+GLC+ G    A  +  EM                
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 49  NGEFGV----------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +  F V                 C P+ VIYT +IDGLCK G  D+A +L+  M++K   
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VVTY ++I GF           L   M  +GV PN VT+ V++D  CKNG ++ A  L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF         KE    +ES+G    +           Y
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSVY 885

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +     TYN+L   L   ++VE AF+LF EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            + GV  +  ++ + I GL +N  I EAL L 
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 171/433 (39%), Gaps = 52/433 (12%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAVIYTTIIDG 69
           +  G +     Y+ L++ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGE-------FLNVLVRK 209

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C+ G    A E L ++KD    P   TYN +I+ F  A+  + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V YN L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +       D  +YS +++ LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + RG L+ADV TY IM+ + C  G +++A   F +M   G  P+ V +  L+   ++ 
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566

Query: 389 NETSKVVELLHRM 401
            + S   EL   M
Sbjct: 567 KKVSYANELFETM 579



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 29/186 (15%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------ING-N 49
           L  ++ + G  PN +TY  LI+  C+ G   VA NL EEM               I G N
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFN 860

Query: 50  GEF----GVV-------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK--DKNINPDVV 96
            EF    G++         P   +Y  +ID L K   ++ A  LL ++      +     
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           TYNS+I   C AN    A +LF EM  +GV P + +F  ++  L +N K+ EA  LL+ +
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980

Query: 157 IQIGVR 162
             + ++
Sbjct: 981 SHMEIQ 986


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 208/413 (50%), Gaps = 24/413 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------IN 47
           A  LF  + + GC PN++TYS LI+G C+ G    A  +FE M                +
Sbjct: 531 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 590

Query: 48  GNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
            N E     +P+ V Y  ++DG CK   V++A++LL  M  +   P+ + Y+++I G C 
Sbjct: 591 DNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
               +EA+ +  EM + G    + T+S ++D   K  + + AS++L  M++    PN  +
Sbjct: 646 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y  ++DG C  G+ + A +L   ME  GC+ NV +Y+ +I+G+    +IE  L L   M 
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SKG+ P  VTY  L     +   ++ A  L +EM++      T  YR  I+G   N   +
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFI 823

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNI 345
           E+L L   +        +  Y  LID L K+ RL++A  L   +      L+    TYN 
Sbjct: 824 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 883

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I +LC   K++ A  LF +M  KGV P+  +F +L+ G  RN++ S+ + LL
Sbjct: 884 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 198/420 (47%), Gaps = 20/420 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLC--RTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           A  L  K+   G  P  + Y+ LI  +C  +       L+L E+  +     GVV   + 
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL--NK 407

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           +  ++    LC  G  +KA  ++ +M  +   PD  TY+ V+   C A+    A  LF E
Sbjct: 408 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +V T+++++D  CK G +E+A +    M ++G  PN   Y  L+  +    +
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI-------- 231
           V+ A ELF +M S GC  N+ +YS LI+G+CK  ++E A  ++  M  SK +        
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587

Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  +P VVTY  L  G  + H+VE A KL D M   G   +   Y   IDGLCK G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA E+   +        + +YS LID   K  R  +A ++   +       +VV Y 
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            MI  LC  GK D+A+ L   ME KG  P+ V +  ++ G     +    +ELL RM  +
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 198/417 (47%), Gaps = 22/417 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   ++++ A G   N I  S+    LC  G    A ++  EMI G G       PD   
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTST 444

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +++ LC    ++ A  L  +MK   +  DV TY  ++  FC A    +A++ F EM 
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 504

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  PNVVT++ ++    K  K+  A++L E M+  G  PN   Y+ L+DG C  G+V 
Sbjct: 505 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 564

Query: 183 RAKELFVSM----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +A ++F  M                +    + NV +Y  L++G+CK+  +E A  L   M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +G +P  + Y+ L  GL ++ +++ A ++  EM  HG  A  + Y + ID   K    
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             A ++   +    C  ++  Y+ +IDGLCK G+   A++L   +       +VVTY  M
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           I      GK++   +L   M +KGVAP+ V +  L+  C +N        LL  M +
Sbjct: 745 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 15/353 (4%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            LC+ G    AL L E       E  V   PD V YT +I GLC+    ++A + L +M+
Sbjct: 238 SLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMR 288

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
             +  P+VVTY++++ G          KR+   MM +G  P+   F+ ++   C +G   
Sbjct: 289 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 348

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVF 201
            A +LL+ M++ G  P   VYN L+   C          ++ A++ +  M + G   N  
Sbjct: 349 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + S      C   + E A S+  EM+ +G  P   TY+ +   L    ++E AF LF+EM
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R G+ AD + Y   +D  CK G I +A + F  +R + C  ++ +Y+ LI    K+ ++
Sbjct: 469 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 528

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             A ELF ++     + ++VTY+ +I   C  G+++KA  +F  M      PD
Sbjct: 529 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 581



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 15/399 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK F   P+  TY+ LI    +      A  +  EM   N       + D         
Sbjct: 184 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN------LRMDGFTLRCFAY 237

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ +N  PD V Y  +I G C A+   EA      M      P
Sbjct: 238 SLCKVG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT+S ++       ++    ++L +M+  G  P+  ++N+L+  +C +G  + A +L 
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE------IEGALSLYSEMLSKGIKPTVVTYNTLF 242
             M   G       Y+ILI   C +K+      ++ A   YSEML+ G+    +  ++  
Sbjct: 355 KKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    + E+AF +  EM   G   DT  Y   ++ LC    +  A  LF  ++     
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+ ++D  CK+G ++ A + F+ +       +VVTY  +IHA     K+  A++L
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M ++G  P+ V ++ L+ G  +  +  K  ++  RM
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 157/342 (45%), Gaps = 51/342 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  L   +   GCEPN I Y  LI+GLC+ G    A  +  EM                
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 49  NGEFGV----------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +  F V                 C P+ VIYT +IDGLCK G  D+A +L+  M++K   
Sbjct: 676 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+VVTY ++I GF           L   M  +GV PN VT+ V++D  CKNG ++ A  L
Sbjct: 736 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 795

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF         KE    +ES+G    +           Y
Sbjct: 796 LEEMKQTHWPTHTAGYRKVIEGF--------NKEF---IESLGLLDEIGQDDTAPFLSVY 844

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +     TYN+L   L   ++VE AF+LF EM
Sbjct: 845 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 904

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + GV  +  ++ + I GL +N  I EAL L   +  + C L
Sbjct: 905 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVCPL 946



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 171/433 (39%), Gaps = 52/433 (12%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-FGVVCKPDAVIYTTIIDG 69
           +  G +     Y+ L++ + R     V     +++ + + E FG            ++  
Sbjct: 116 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQ-------FLNVLVRK 168

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            C+ G    A E L ++KD    P   TYN +I+ F  A+  + A  +  EM    ++ +
Sbjct: 169 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 228

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             T       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 229 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 285

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 286 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V YN L   +           ++ A K + EM   GV  
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +       D  +YS +++ LC + ++++A+ LF
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 465

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + RG L+ADV TY IM+ + C  G +++A   F +M   G  P+ V +  L+   ++ 
Sbjct: 466 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 525

Query: 389 NETSKVVELLHRM 401
            + S   EL   M
Sbjct: 526 KKVSYANELFETM 538


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 220/421 (52%), Gaps = 41/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +++++ A   + + +TY  LI+GLCR+G    A  ++ +M+      G+V   D  
Sbjct: 282 EAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA----GLVL--DVS 335

Query: 62  IYTTIIDGLCK----------------------------------EGFVDKAKELLLQMK 87
           +Y ++I G C+                                   G V +A ELL Q++
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLE 395

Query: 88  -DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
            D + +PD VT+ ++I G C    +N A  +  +  + G + +V ++S +++  CK+G+ 
Sbjct: 396 NDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRT 455

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A+++ + M++ G +PN+ VYN L++GFC   ++N A ++++ M S GC   + +Y+ L
Sbjct: 456 HDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL 515

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK ++ + A SL  EML +G KP + TY +L  GL    +V+ A +++DE+   G+
Sbjct: 516 IDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGL 575

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   I GLC  G + EA  ++  ++   C  ++ +Y+ L+DG  + G +  A  
Sbjct: 576 QVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAAS 635

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L+ ++    L  D+VTYN  I  LC+  +  +   L  ++ A G+ P  + ++ L+   I
Sbjct: 636 LWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVI 695

Query: 387 R 387
           +
Sbjct: 696 K 696



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 205/439 (46%), Gaps = 39/439 (8%)

Query: 3   AAALFTKLKAF-GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A A F  L +  GC P V +++TL++   R      A   F  +   +G FG    P+  
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASL--SHGAFGRRIAPNLQ 159

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  I+  LC  G VD+A  L   ++ + + PD VTY++++ G    +  + A  L  EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTGR 180
            + GVQ + V ++ ++    + G  E+A ++ E +++  G  PN   Y  ++DG C  GR
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A E++  M +   + +  +Y ILI+G C++ +++ A  +YS+M+  G+   V  YN+
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV---------------------------------- 266
           L  G  E+ +   A+K +D     G+                                  
Sbjct: 340 LIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDAS 399

Query: 267 -AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
            + D   + T I GLC+NGY   A E+    R    ELD+ SYS +I+  CK GR   A 
Sbjct: 400 CSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDAN 459

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           E++ ++ +     +   YN +I+  C   K++ A  ++++M + G  P  + +NTL+ G 
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519

Query: 386 IRNNETSKVVELLHRMDER 404
            +  +  +   L   M ER
Sbjct: 520 CKAEKYQEASSLTKEMLER 538



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 221/455 (48%), Gaps = 79/455 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A +LF+ L+  G  P+ +TYSTL++GL +      AL+L +EM N    +GV  + DAV
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN----YGV--QADAV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  ++ G  + G  +KA ++  Q+ +D   +P++ TY  ++ G C      EA  ++  
Sbjct: 230 CYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSR 289

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM    Q + VT+ +++  LC++G ++ A+++   M++ G+  +  VYN+L+ GFC  GR
Sbjct: 290 MMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGR 349

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYN 239
              A + + S    G +  + +Y+I+  G   +  +  A  L  ++ +     P  VT+ 
Sbjct: 350 TGEAWKFWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFG 408

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--- 296
           TL  GL E     RAF++ ++ +  G   D ++Y + I+  CK+G   +A E+++ +   
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468

Query: 297 -----------------RILK---------------CELDIRSYSCLIDGLCKSGRLKIA 324
                            R+ K               C   I +Y+ LIDGLCK+ + + A
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528

Query: 325 WEL---------------FHSLPRGV--------------------LIADVVTYNIMIHA 349
             L               + SL RG+                    L  DV+ +NI+IH 
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           LC+ GK+D+A  ++L+M+ K  +P+ V +NTLM G
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDG 623



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 168/323 (52%), Gaps = 7/323 (2%)

Query: 2   EAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  L  +L+    C P+ +T+ TLI+GLC  G+   A  + E+  N   E       D 
Sbjct: 386 EATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL------DV 439

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+++I+  CK+G    A E+   M      P+   YN++I GFC  +  N+A +++IE
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P ++T++ ++D LCK  K +EAS L + M++ G +P+   Y +L+ G C   +
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  ++  +   G + +V  ++ILI+G C   +++ A  +Y EM  K   P +VTYNT
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G +EI  +++A  L+  +  +G+  D   Y T I GLC      E + L   +    
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679

Query: 301 CELDIRSYSCLIDGLCKSGRLKI 323
               + ++S L+  + K G ++I
Sbjct: 680 IMPTVITWSILVRAVIKYGPIQI 702



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
            + TY+ +  GL  +G    A  L +++ N        C PD V + T+I GLC+ G+ +
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATELLKQLEND-----ASCSPDKVTFGTLIHGLCENGYAN 421

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A E+L   ++     DV +Y+S+I  FC    +++A  ++  M+  G +PN   ++ ++
Sbjct: 422 RAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           +  C+  K+ +A ++   M   G  P    YNTL+DG C   +   A  L   M   G K
Sbjct: 482 NGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            ++ +Y+ LI G C++K+++ AL ++ E+L  G++  V+ +N L  GL    +V+ AF +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           + EM+    + +   Y T +DG  + G I +A  L+  +     + DI +Y+  I GLC 
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             R      L + +    ++  V+T++I++ A+   G +
Sbjct: 662 CNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 168/290 (57%), Gaps = 8/290 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMI------NGNGEFGVVCKPDAVIYTTII 67
           GC PNV+T++TL+N LCR G  + AL L + M+      N  G+  +  K D VI T I+
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHI--KADVVISTAIV 62

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           D LCK+G    A+ L  +M +K I P+V+TYN +I  FC++   ++A +L   M+++ + 
Sbjct: 63  DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 122

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++VTFS +++   K  K+ EA ++ + M++  + P    YN+++DGFC   RV+ AK +
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
             SM S GC  +V ++S LINGYCK K ++  + ++ EM  +GI    VTY TL  G  +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +  ++ A  L +EM   GVA D   +   + GLC    + +A  +   L+
Sbjct: 243 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 292



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 10/293 (3%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF----------VYNT 170
           M++ G +PNVVTF+ +M+ LC+ G++ EA  L++ M++ G +PNA           +   
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++D  C  G    A+ LF  M   G   NV +Y+ +I+ +C +     A  L   M+ K 
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           I P +VT++ L     +  +V  A +++ EM R  +   T  Y + IDG CK   + +A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            +  ++    C  D+ ++S LI+G CK+ R+    E+F  + R  ++A+ VTY  +IH  
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G +D A DL  +M + GVAPD + F+ ++ G     E  K   +L  + +
Sbjct: 241 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 293



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 162/307 (52%), Gaps = 13/307 (4%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP----------DVVTYNSVIRGF 105
           C+P+ V + T+++ LC+EG V +A  L+ +M ++   P          DVV   +++   
Sbjct: 6   CRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRL 65

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C   +   A+ LF EM ++G+ PNV+T++ ++D  C +G+  +A QLL  MI+  + P+ 
Sbjct: 66  CKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 125

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             ++ L++ F    +V+ A+E++  M          +Y+ +I+G+CK   ++ A  +   
Sbjct: 126 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 185

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M SKG  P VVT++TL  G  +  +V+   ++F EM R G+ A+T  Y T I G C+ G 
Sbjct: 186 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 245

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  A +L   +       D  ++ C++ GLC    L+ A+ +   L +  +   ++ +  
Sbjct: 246 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFF-- 303

Query: 346 MIHALCA 352
            + +LC+
Sbjct: 304 -LFSLCS 309



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 10/303 (3%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN----------VVTFSV 135
           M +    P+VVT+N+++   C      EA  L   M+++G QPN          VV  + 
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+D LCK+G    A  L   M + G+ PN   YN ++D FC +GR + A +L   M    
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              ++ ++S LIN + K +++  A  +Y EML   I PT +TYN++  G  +  +V+ A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ D M   G + D   + T I+G CK   +   +E+F  +       +  +Y+ LI G 
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ G L  A +L + +    +  D +T++ M+  LC+  ++ KA  +  D++   V P  
Sbjct: 241 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRL 300

Query: 376 VAF 378
           + F
Sbjct: 301 IFF 303



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 6/238 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LFT++   G  PNV+TY+ +I+  C +G    A  L   MI           PD 
Sbjct: 72  INAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ------INPDI 125

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V ++ +I+   KE  V +A+E+  +M   +I P  +TYNS+I GFC  +  ++AKR+   
Sbjct: 126 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 185

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+VVTFS +++  CK  +++   ++   M + G+  N   Y TL+ GFC  G 
Sbjct: 186 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 245

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           ++ A++L   M S G   +  ++  ++ G C  KE+  A ++  ++    + P ++ +
Sbjct: 246 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFF 303



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 10/224 (4%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------IKPTVVTYNT 240
           M   GC+ NV +++ L+N  C+   +  AL+L   M+ +G          IK  VV    
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +      A  LF EM   G+  +   Y   ID  C +G   +A +L R +   +
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI ++S LI+   K  ++  A E++  + R  +    +TYN MI   C   ++D A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   M +KG +PD V F+TL+ G  +       +E+   M  R
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 224


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 205/403 (50%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L   + A G + +V+TY+TLI+GLC++G    A  L ++M +        C P+ V
Sbjct: 28  HALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVV 81

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLCK      A + + +M      PD+VTYNS+I G C AN  ++A  +  E+
Sbjct: 82  TYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL 141

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G  P+VVT++  +  LCK GK+++  ++LE M + G+ P+   + +++ G C   R
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A ++F  M   GC  +  +YSI+++   +   ++    +   M+  G      TY  
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L     +E A   +++    G   + + +  FI  LC++G    A  +   +    
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKA 359
              ++ SY+ +IDGLCKSG +  AW+L    L  G    DV+ +N +I   C  G++ +A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381

Query: 360 HDLFLDMEAKGV-APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  +M+AK +  PD V +NT++ G  +     +   LL  M
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 199/386 (51%), Gaps = 8/386 (2%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+TLI GLC+      AL L   M   NG    V     V YTT+IDGLCK G +D A+ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMA-ANGYDASV-----VTYTTLIDGLCKSGDLDAAQA 66

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL +M D    P+VVTY ++I G C A   ++A +    M+  G +P++VT++ ++  LC
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 142 KNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
              +M++A  +L ELMI+ G  P+   YNT + G C  G++++  E+   M+  G   +V
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            ++  +I+G CK   I+ A  ++  ML +G  P  +TY+ +   L   ++++   ++ + 
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEH 246

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M + G  A +  Y   I  L + G I  A   +       C +++ +++  I  LC+SG+
Sbjct: 247 MVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGK 306

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG-VAPDCVAFN 379
             +A  +   +     + ++++YN +I  LC  G +D A  L   M   G   PD + FN
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           TL+ G  +    S+  +LL  M  +N
Sbjct: 367 TLISGFCKAGRLSQAQQLLKEMKAKN 392



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 188/372 (50%), Gaps = 11/372 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL  K+   GC PNV+TY+ LI+GLC+      A+   + M+         C+PD V 
Sbjct: 64  AQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG------CEPDLVT 117

Query: 63  YTTIIDGLCKEGFVDKAKELLLQ--MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           Y ++I GLC    +D A  L+LQ  M +    PDVVTYN+ I G C A   ++   +  E
Sbjct: 118 YNSLIHGLCMANRMDDAG-LVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 176

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+VVTF  I+  LCK  ++++A Q+ + M++ G  P++  Y+ ++D      R
Sbjct: 177 MDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 236

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++  +E+   M   G      +Y+ LI+   +  +IE A   Y + +  G    V T+N 
Sbjct: 237 LDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNA 296

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT-LRIL 299
               L    +   A  +   M   G   +  +Y   IDGLCK+G + +A +L R  L   
Sbjct: 297 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDK 358
            C+ D+  ++ LI G CK+GRL  A +L   +  + + + DVVTYN MI      G + +
Sbjct: 357 CCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQ 416

Query: 359 AHDLFLDMEAKG 370
           A  L  +M+A G
Sbjct: 417 AKLLLEEMQAVG 428



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 163/352 (46%), Gaps = 36/352 (10%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M  ++   D   YN++I G C A     A  L   M   G   +VVT++ ++D LCK+G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++ A  LL+ M   G  PN   Y  L+DG C   R + A +    M   GC+ ++ +Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 206 LINGYC-KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           LI+G C  N+  +  L L   M+  G  P VVTYNT   GL +  ++++  ++ +EM R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G++ D   + + I GLCK   I +A ++F+ +    C  D  +YS ++D L ++ RL   
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 325 WE-------------------LFHSLPR----------------GVLIADVVTYNIMIHA 349
            E                   L H+L R                   + +V T+N  I A
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC  GK   A ++ L M   G  P+ +++N ++ G  ++       +L  +M
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 121/231 (52%), Gaps = 8/231 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   GC P+ +TYS +++ L R         + E M+  +G + +     + 
Sbjct: 204 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVK-SGHYAL-----SA 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  L + G ++ A     Q  +     +V T+N+ I   C +     AK + + M
Sbjct: 258 TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           ++ G  PN+++++ ++D LCK+G +++A +L   M+  G  +P+   +NTL+ GFC  GR
Sbjct: 318 IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGR 377

Query: 181 VNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++A++L   M++   C  +V +Y+ +I+G  K   ++ A  L  EM + G
Sbjct: 378 LSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 206/436 (47%), Gaps = 42/436 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++K  G  P   TY+TL++   R G    A  + E M      +G   +PD  
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLR 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +  GLC+ G VD+A  L  +M+      PDVVTYN+++        S++A RL  E
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+GV+P +VT ++++  LCK GK+EEA   LE + + G+ P+   YNTL+D +C  G 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 181 VNRAKELFVSMESMGCKHNVF-----------------------------------SYSI 205
           V +A  L   M   G K + F                                   SY  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  Y K    E AL L+ +M+ + + P++ TYNTL  GL  + +++ A    +E    G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D   Y   I   CK G +  A      +     + D+ + + L++GLC  G+L  A 
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF S        DV+TYN +I ++C  G +D A   F DME KG+ PD   +N ++   
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674

Query: 386 IRNNETSKVVELLHRM 401
                + +   +LH++
Sbjct: 675 SEAGRSEEAHNMLHKL 690



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 190/404 (47%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A  + ++ FG  P+ +TY+TL+N  CR G    A  L   M       G+   P   
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRD----GIA--PTQP 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++    + G++ +A +++  M      PD+ TYN +  G C A   +EA RL  EM
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 122 MDQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              G   P+VVT++ ++D   K     +A +LLE M   GV+P    +N ++   C  G+
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A      +   G   +V +Y+ LI+ YCK   +  A +L  EM+ KG+K    T NT
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L ++ + E A +L     + G   D  +Y T +    K      AL L+  +   K
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               I +Y+ LI GLC+  RLK A +  +      L+ D  TYNI+IHA C +G ++ A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                M      PD V  NTLM G   + +  K ++L     E+
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 184/379 (48%), Gaps = 9/379 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  L      PN  T++ L++  C  G    AL     M      FG+   PDAV Y T
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG----FGL--SPDAVTYNT 248

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++  C++G + +A+ LL +MK   I P   TYN+++  F       +A ++   M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR-PNAFVYNTLMDGFCLTGRVNR- 183
            +P++ T++V+   LC+ GK++EA +L + M ++G   P+   YNTL+D  C   R +  
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDA-CFKWRCSSD 367

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   M   G K  + +++I++   CK  ++E AL    ++  +G+ P V+TYNTL  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              +   V +AF L DEM   G+  DT+   T +  LCK     +A EL  +        
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  SY  ++    K    + A  L+  +    LI  + TYN +I  LC   ++ +A D  
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 364 LDMEAKGVAPDCVAFNTLM 382
            +   KG+ PD   +N ++
Sbjct: 548 NEFVEKGLVPDETTYNIII 566



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 196/406 (48%), Gaps = 10/406 (2%)

Query: 3   AAALFTKLKAF-GCEPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPD 59
           AA L   L+   G  P++   + +++ L R+  T+   +L++F  +I       +   P+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE------LRLHPN 207

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              +  ++   C +G +  A   L  M+   ++PD VTYN+++   C      EA+ L  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M   G+ P   T++ ++    + G +++A++++E M   G  P+   YN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 180 RVNRAKELFVSMESMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +V+ A  L   ME +G    +V +Y+ L++   K +    AL L  EM  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N +   L +  ++E A    +++   G+A D   Y T ID  CK G + +A  L   +  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              ++D  + + ++  LCK  R + A EL HS P+   + D V+Y  ++ A   +   + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           A  L+  M  + + P    +NTL+ G  R     + ++ L+   E+
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 183/418 (43%), Gaps = 63/418 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING---------NGEF 52
           EA     K+   G  P+VITY+TLI+  C+ G+   A  L +EM+           N   
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 53  GVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
             +CK                    PD V Y T++    KE   + A  L  QM ++ + 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + TYN++I+G C      EA     E +++G+ P+  T+++I+   CK G +E A + 
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+    NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL  + +M  KG++P   TYN +   L E  + E A  +      H +A     
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNML-----HKLADSGKL 696

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
            ++F   L K     EA              D++ +    +          A E      
Sbjct: 697 SQSFACPLLKPSSADEA--------------DVKEHEGKPEAESSEKAQDNALE------ 736

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
                    TY   ++ LC  G++ +A  +  +M  KG+  DC  + TLM G I+  +
Sbjct: 737 ---------TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 44/183 (24%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  LF      G + +VITY+TLI  +C+ G    AL+ F++M + G        +PDA
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG-------LQPDA 664

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKN----------INPDVV-------------- 96
             Y  ++  L + G  ++A  +L ++ D            + P                 
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724

Query: 97  ------------TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
                       TY   + G C      EAK +  EMM +G+  +  T+  +M+ L K  
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQ 784

Query: 145 KME 147
           K +
Sbjct: 785 KRQ 787


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 211/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++ A G  P++ +Y+ ++N  C+ G    A N  +EM          C+P+ V
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS------CCEPNVV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++IDG    G V  AK++L  M +K I  +  TY  +I+G+C      +A++L   M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++ +  +   + V++   C  G++++A ++ + M+++G++ N  + N+L++G+C  G V
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A E+ VSM+    K + + Y+ L++G+CK ++   A  L  EM +KG+  TVVTYNTL
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              LF +  VE A  +++ M + GVA +   Y T +D   K G    A+ +++       
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              I  Y+ +I G CK  +L  A E+F  +       D +TY  +I   C  G + +A  
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L    E  G++     +N+L+ G  R+ E  K+  LL  M  R
Sbjct: 593 LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNR 635



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 193/376 (51%), Gaps = 18/376 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +F K+K  G  P+ ITY TLI+G C+ G+ + AL L ++M   +G          
Sbjct: 553 VQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDG-----ISSST 606

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y ++I G+ +   + K   LL +MK++ ++P+VVTY S+I G+C     ++A   + +
Sbjct: 607 EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFK 666

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G+ PN++  S I+  L ++GK++EA+ +L  +  I   P A   +++     L   
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADID--PIAAHAHSVE----LPKS 720

Query: 181 VNRAKELFVSMESMGCK------HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
             R  E    ++S G K       N   Y+I I G CK+K I+    + S++L KG  P 
Sbjct: 721 DLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD 780

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TY +L      + +V  AF L D+M   G+  +   Y   I+GLCK+G +  A  LF 
Sbjct: 781 NYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFN 840

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            L        + +Y+ LIDG CK GR   A EL   +    +    +TY+ +IH L  +G
Sbjct: 841 KLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEG 900

Query: 355 KMDKAHDLFLDMEAKG 370
           K +++  L  +M   G
Sbjct: 901 KSEQSVGLLNEMMKAG 916



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 196/425 (46%), Gaps = 41/425 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G    V+TY+TL+  L   GH   AL+++  M     + GV   P+ V Y T++D   K 
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM----HKRGVA--PNEVTYCTLLDAFFKV 514

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  D+A  +      K     +  YN++I GFC      +A+ +F++M + G  P+ +T+
Sbjct: 515 GTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITY 574

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             ++D  CK G + EA +L ++  + G+  +  +YN+L+ G   +  + +   L   M++
Sbjct: 575 RTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKN 634

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE------ 247
                NV +Y  LI G+C    ++ A + Y +M+ KGI P ++  + +   L+       
Sbjct: 635 RELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDE 694

Query: 248 ----IHQVE----------------------RAFKLFDEMQRHGVA---ADTWAYRTFID 278
               +HQ+                          K+ D   +  ++   ++   Y   I 
Sbjct: 695 ANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAIT 754

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK+  I +   +   L +     D  +Y  LI      G++  A+ L   +    L+ 
Sbjct: 755 GLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVP 814

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           ++V YN +I+ LC  G +D+A  LF  +  KG++P  V +NTL+ G  +   T++ +EL 
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELK 874

Query: 399 HRMDE 403
            +M E
Sbjct: 875 DKMRE 879



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 8/339 (2%)

Query: 70  LCKEGFVDKA--KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           LCK  ++  A   EL+   ++ + +P V  ++ +++ F     +  A  +F  M   G  
Sbjct: 161 LCKNNYIASAVWDELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRV 218

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++ + + ++  L +NG+  +A  + E MI +G+ P+ F Y  +++ +C  GRV+ A   
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              ME   C+ NV +Y+ LI+GY    ++ GA  + + M  KGI     TY  L  G  +
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             Q+E+A KL   M    +  D   Y   I   C  G + +AL +   +  LK  L + +
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM--LKVGLKMNT 396

Query: 308 YSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             C  LI+G CK G +  A E+  S+    L  D   YN ++   C      KA  L  +
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  KGV    V +NTL+            + + + M +R
Sbjct: 457 MHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKR 495



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 139/324 (42%), Gaps = 20/324 (6%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           L  K     PDV +Y  ++     A    E +    E++                 LCKN
Sbjct: 121 LASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV----------------VLCKN 164

Query: 144 GKMEEA--SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
             +  A   +L+ +  +    P   V++ ++  F   G    A  +F +M   G   ++ 
Sbjct: 165 NYIASAVWDELVSVYREFSFSPT--VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLR 222

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S + L++   +N E   AL +Y +M++ GI P + +Y  +     +  +V+ AF    EM
Sbjct: 223 SCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEM 282

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R     +   Y + IDG    G +  A ++   +       + R+Y+ LI G CK G++
Sbjct: 283 ERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQM 342

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A +L   +    L  D   Y ++IHA C  G++D A  +   M   G+  + V  N+L
Sbjct: 343 EQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSL 402

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  +    +K  E+L  M + N
Sbjct: 403 INGYCKLGHVNKAAEVLVSMKDWN 426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   G  PN++ Y+ LINGLC++G+   A  LF ++            P  V
Sbjct: 799 EAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKG------LSPTVV 852

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK G   +A EL  +M+++ I P  +TY+++I G      S ++  L  EM
Sbjct: 853 TYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912

Query: 122 MDQGVQPNVV 131
           M  G   +V+
Sbjct: 913 MKAGKGSSVM 922


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 209/413 (50%), Gaps = 15/413 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----------GE 51
           +A+ +F ++   GC PN ITYS L++GLC+ G +  A  ++ +MI  +          GE
Sbjct: 543 QASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  +IDGLCK   V  A+ELL  M      P+ + Y+++I GFC     
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKL 662

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F  M   G  P V T++ ++D + K+ +++ A ++L  M++    PN   Y  +
Sbjct: 663 DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM 722

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K+ +++ +L L+++M+++G 
Sbjct: 723 IDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A  L  EM++         Y + + G  K    + +L 
Sbjct: 783 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK--FIASLG 840

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL---PRGVLIADVVTYNIMIH 348
           L   L           Y  LID   K+GRL+ A EL   +      + I    TY  +I 
Sbjct: 841 LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQ 900

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC   +++KA +L+ ++  KGV P+  AF  L+ G I+ N+ ++ ++L + M
Sbjct: 901 ALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 205/418 (49%), Gaps = 24/418 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K+ G  P+V TY+ LI+  C+ G    A + F+EM +      V C P  V
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMES------VGCSPSVV 526

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++    K   V +A ++  +M D    P+ +TY++++ G C A +S +A  ++ +M
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586

Query: 122 M----------------DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           +                   + PNVVT+  ++D LCK  K+ +A +LL++M   G  PN 
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            +Y+ L+DGFC  G+++ A+E+F  M   G    V +Y+ LI+   K++ ++ A+ + S+
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQ 706

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P VVTY  +  GL  I + ++A KL   M++ G   +   Y + IDGL K+G 
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  +L+LF  +    C  +  +Y  LI+  C +G L  A  L   + +      V  Y  
Sbjct: 767 VDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCS 826

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++       K   +  L  ++E+ G+      +  L+    +     K +EL   M E
Sbjct: 827 VVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMME 882



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 202/460 (43%), Gaps = 63/460 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +   +++   C PNV+TY TL+ G  +         +   M+N        C P+  
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG------CNPNPS 345

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA------------- 108
           ++ +++   C       A +LL +M      P  V YN  I   C               
Sbjct: 346 LFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAE 405

Query: 109 ----------------NDSNEAK------------RLFIEMMDQGVQPNVVTFSVIMDEL 140
                           N +N A+            ++   MM +G  P+  T+S ++  L
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFL 465

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+  K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+  F  MES+GC  +V
Sbjct: 466 CEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L++ Y K K++  A  ++  M+  G  P  +TY+ L  GL +  + ++A +++ +
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 261 M----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           M                    +A +   Y   IDGLCK   +V+A EL   +    CE +
Sbjct: 586 MIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPN 645

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              Y  LIDG CK G+L  A E+F  + +   +  V TY  +I A+  D ++D A  +  
Sbjct: 646 HIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLS 705

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M      P+ V +  ++ G  R  E  K ++LL  M++R
Sbjct: 706 QMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKR 745



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 184/442 (41%), Gaps = 48/442 (10%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN---GNGEFGVVC--------- 56
           +LK FG  P+  TY+ L+  L   G   +   + +EM        +F V C         
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG 256

Query: 57  --------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
                         K D V+ T +I GL +    D+A   L +M+  +  P+VVTY +++
Sbjct: 257 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            GF         KR+   MM++G  PN   F+ ++   C       A +LL  M   G  
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376

Query: 163 PNAFVYNTLMDGFCLTGRVNR------AKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P   VYN  +   C    +        A++++  M +  C  N  + +      C   + 
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 436

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  +   M+ KG  P   TY+ +   L E  +VE+AF LF EM+  GV  D + Y   
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ID  CK G I +A   F  +  + C   + +Y+ L+    K+ ++  A ++FH +     
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDM----------------EAKGVAPDCVAFNT 380
             + +TY+ ++  LC  G+  KA +++  M                    +AP+ V +  
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 381 LMLGCIRNNETSKVVELLHRMD 402
           L+ G  + ++     ELL  M 
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMS 638



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 11/334 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   + + GCEPN I Y  LI+G C+ G    A  +F  M     + G +  P  
Sbjct: 628 VDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM----SKCGYL--PTV 681

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT++ID + K+  +D A ++L QM + +  P+VVTY ++I G C   +  +A +L   
Sbjct: 682 HTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 741

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PNVVT++ ++D L K+GK++ + QL   MI  G  PN   Y  L++  C  G 
Sbjct: 742 MEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGL 801

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+       V  Y  ++ G+  +K+   +L L  E+ S G+      Y  
Sbjct: 802 LDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGL 859

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA---YRTFIDGLCKNGYIVEALELFRTLR 297
           L     +  ++E+A +L  EM     + +  +   Y + I  LC    + +A EL+  + 
Sbjct: 860 LIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEIT 919

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
                 ++ ++ CLI GL K  +   A +L +S+
Sbjct: 920 RKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 145/313 (46%), Gaps = 45/313 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  P V TY++LI+ + +     +A+ +  +M+  +      C P+ V 
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS------CTPNVVT 718

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDGLC+ G   KA +LL  M+ +  NP+VVTY S+I G   +   + + +LF +M+
Sbjct: 719 YTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI 778

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI----------------------- 159
            QG  PN VT+ V+++  C  G ++EA  LL  M Q                        
Sbjct: 779 TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIAS 838

Query: 160 ----------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---YSIL 206
                     G+   A VY  L+D F   GR+ +A EL   M  +    N+ S   Y+ L
Sbjct: 839 LGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSL 898

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I   C   ++E A  LYSE+  KG+ P +  +  L  GL ++++   A +L   M   GV
Sbjct: 899 IQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958

Query: 267 AADTWAYRTFIDG 279
               W      DG
Sbjct: 959 ---NWQSNNSFDG 968



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 75/410 (18%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+   C+ G   KA E L ++KD    P   TYN++++    A   +   R+  EM + G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 126 VQPNVVTFSVIMDELCKNGKMEEA----------------SQLLELMIQIGVR------- 162
              +  T       LCK G+  +A                +Q++  +++  +        
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFL 297

Query: 163 ---------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
                    PN   Y TL+ GF    ++   K +   M + GC  N   ++ L++ YC  
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIG----------------------------- 244
           ++   A  L + M   G  P  V YN +FIG                             
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYN-IFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416

Query: 245 -------------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                        L  + + ++AF++   M R G   DT  Y   I  LC+   + +A  
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ ++ +    D+ +Y+ LID  CK G ++ A   F  +        VVTY  ++HA  
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              ++ +A D+F  M   G AP+ + ++ L+ G  +  E+ K  E+  +M
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 217/448 (48%), Gaps = 63/448 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK- 72
           GC P+   +++L++  CR+G    A  L ++M+         C+P  V+Y  +I G+C  
Sbjct: 107 GCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG------CQPGYVVYNILIGGICSS 160

Query: 73  ----EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
               +  +D A++   +M +  +  + V  ++  R  C      +A  +  EMM +G  P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +  T+S ++  LC   K+E+A QL + M + G+ P+ +VY TL+D FC  G + +A+  F
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             ME  GC  NV +Y+ LI+ Y K++++  A  +Y  MLSKG  P +VTY  L  GL + 
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340

Query: 249 HQVERAFKLFDEMQRHGV-----------------AADTWAYRTFIDGLCKNGYIVEALE 291
            ++E+A +++  M++  V                   + + Y   +DGLCK   + EA +
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS--------------------- 330
           L +++ +  CE +   Y  LIDG CK+G+L  A E+F +                     
Sbjct: 401 LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460

Query: 331 ------LPRGVL--------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
                 L   VL          +VV Y  MI  LC  GK D+A+ L + ME KG  P+ V
Sbjct: 461 KDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV 520

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  ++ G  ++    K +ELL +M  +
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSK 548



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 207/410 (50%), Gaps = 15/410 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF--------- 52
           +A  ++  + + GC PN++TY+ LI+GLC+ G    A  +++ M   N E          
Sbjct: 310 KANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRV 369

Query: 53  --GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
             G   +P+   Y  ++DGLCK   V +A++LL  M  +   P+ V Y+++I G C A  
Sbjct: 370 VDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGK 429

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
            +EA+ +F  M++ G  PNV T+S ++D L K+ +++ A ++L  M++    PN  +Y  
Sbjct: 430 LDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE 489

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+ + A +L V ME  GC  NV +Y+ +I+G+ K+  +E  L L  +M SKG
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P  VTY  L         ++ A KL +EM++         YR  I+G   N   + +L
Sbjct: 550 CAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASL 607

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--RGVLIADVVTYNIMIH 348
            L   +           Y  LID   K+GRL+IA EL   L        A+   +  +I 
Sbjct: 608 YLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIE 667

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            L    K DKA +L+ DM ++G  P+      L+ G +R N   + ++LL
Sbjct: 668 NLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 180/366 (49%), Gaps = 23/366 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  G  P+V  Y+TLI+  C+ G    A N F+EM          C P+ V
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG------CAPNVV 293

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I    K   V KA E+   M  K   P++VTY ++I G C A    +A +++  M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353

Query: 122 MDQGV-----------------QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
             + V                 +PNV T+  ++D LCK  +++EA  LL+ M   G  PN
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN 413

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY+ L+DG C  G+++ A+E+F +M   G   NV++YS LI+   K+K ++ AL + S
Sbjct: 414 HVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLS 473

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +ML     P VV Y  +  GL ++ + + A+KL   M+  G   +   Y   IDG  K+G
Sbjct: 474 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + + LEL + +    C  +  +Y  LI+  C +G L  A +L   + +      V  Y 
Sbjct: 534 RVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYR 593

Query: 345 IMIHAL 350
            +I   
Sbjct: 594 KVIEGF 599



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 55/454 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRT---------------------GHTIVALNL 41
           A  L  K+   GC+P  + Y+ LI G+C +                     G  +  +N+
Sbjct: 131 AYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNI 190

Query: 42  --FEEMINGNGEF-------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
             F   + G G+F             G +  PD   Y+ +I  LC    V+KA +L  +M
Sbjct: 191 SNFSRCLCGIGKFEKAYNVIREMMSKGFI--PDTSTYSKVIGYLCNASKVEKAFQLFQEM 248

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K   I PDV  Y ++I  FC A    +A+  F EM   G  PNVVT++ ++    K+ K+
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKV 308

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--------------- 191
            +A+++ E+M+  G  PN   Y  L+DG C  G++ +A +++  M               
Sbjct: 309 SKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFR 368

Query: 192 --ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
             +    + NVF+Y  L++G CK  +++ A  L   M  +G +P  V Y+ L  G  +  
Sbjct: 369 VVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG 428

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A ++F  M   G   + + Y + ID L K+  +  AL++   +    C  ++  Y+
Sbjct: 429 KLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYT 488

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +IDGLCK G+   A++L   +       +VVTY  MI      G+++K  +L   M +K
Sbjct: 489 EMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSK 548

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           G AP+ V +  L+  C       +  +LL  M +
Sbjct: 549 GCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 184/371 (49%), Gaps = 15/371 (4%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +   G   +  T     + LC++G    AL+L E+      EF     PD V+YT +I G
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-----EEF----VPDTVLYTKMISG 51

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC+    ++A + L +M+  +  P+V+TY  ++ G          KR+   M+ +G  P+
Sbjct: 52  LCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPS 111

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR-----A 184
              F+ ++   C++G    A +LL+ M+Q G +P   VYN L+ G C +    +     A
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++ +  M   G   N  + S      C   + E A ++  EM+SKG  P   TY+ +   
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    +VE+AF+LF EM+R+G+A D + Y T ID  CK G+I +A   F  +    C  +
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI    KS ++  A E++  +       ++VTY  +I  LC  GK++KA  ++ 
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 365 DMEAKGVA-PD 374
            M+ + V  PD
Sbjct: 352 IMKKENVEIPD 362



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 8/342 (2%)

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ +   PD V Y  +I G C A+   EA      M      P
Sbjct: 19  SLCKSG---KWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+T+ +++       K+    ++L +MI  G  P+  ++N+L+  +C +G    A +L 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE-----IEGALSLYSEMLSKGIKPTVVTYNTLFI 243
             M   GC+     Y+ILI G C ++E     ++ A   Y EML  G+    V  +    
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            L  I + E+A+ +  EM   G   DT  Y   I  LC    + +A +LF+ ++      
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D+  Y+ LID  CK+G ++ A   F  + R     +VVTY  +IHA     K+ KA++++
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M +KG  P+ V +  L+ G  +  +  K  ++   M + N
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 22/303 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +FT +   G +PNV TYS+LI+ L +     +AL +  +M+  +      C P+ V
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS------CAPNVV 485

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +IDGLCK G  D+A +L++ M++K  NP+VVTY ++I GF  +    +   L  +M
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN VT+ V+++  C  G ++EA +LLE M Q     +   Y  +++GF      
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF------ 599

Query: 182 NRA--KELFVSMESMGCKHNVFS--YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           NR     L++S E         +  Y +LI+ + K   +E AL L  E+ S    P    
Sbjct: 600 NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSS--FSPFSAA 657

Query: 238 YNTLFIGLFE----IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
              + I L E     H+ ++AF+L+ +M   G   +       I GL +     EAL+L 
Sbjct: 658 NQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717

Query: 294 RTL 296
            ++
Sbjct: 718 DSI 720


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 192/381 (50%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC P V+TY  L+ GLCR            +        G V + + V
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRV----------RQADEARAMLGRVPELNVV 312

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ T+I G   EG + +A EL   M  K   PD  TY+ ++ G C     + A RL  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVVT+++++   CKNG  ++   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+    +TYNT+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  +L L   +     
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ LI  LCK  R++ A EL   +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L   +  + V PD + +N L+
Sbjct: 613 LLEKLHNENVHPDIITYNILI 633



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 196/388 (50%), Gaps = 10/388 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P   T+      LCR G    AL L   M          C PDAV+Y T+I  LC +G V
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHG------CVPDAVLYQTVIHALCDQGGV 226

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  LL +M       DV T++ V+RG C      EA RL   MM +G  P V+T+  +
Sbjct: 227 TEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 286

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC+  + +EA  +L  + ++    N  ++NT++ G    G++  A EL+ +M   GC
Sbjct: 287 LQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + +  +YSIL++G CK   I  A+ L  EM  KG  P VVTY  +     +    +    
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L +EM   G+  ++  Y   I  LCK+G + EA+ L + +R   C  DI SY+ +I  LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            + +++ A  +F +L    ++A+ +TYN +IHAL  DG+   A  L  +M   G + D V
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++N L+    ++    + + LL  M E+
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEK 550



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 209/439 (47%), Gaps = 45/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   +   GC P+ + Y T+I+ LC  G    A  L  EM+       + C  D  
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL------MGCAADVN 246

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G+C  G V +A  L+ +M  K   P V+TY  +++G C    ++EA+     M
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AM 302

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV F+ ++      GK+ EA++L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK--------------------------- 214
           + A  L   ME  G   NV +Y+I+++ +CKN                            
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 215 --------EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                    ++ A+ L  EM S+G  P + +YNT+   L    Q+E A  +F+ +   GV
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+   Y T I  L ++G   +A+ L + + +  C LD+ SY+ LI  +CK G +  +  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    +  + V+YNI+I  LC + ++  A +L   M  +G+APD V +NTL+ G  
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 387 RNNETSKVVELLHRMDERN 405
           +       + LL ++   N
Sbjct: 603 KMGWMHAALNLLEKLHNEN 621



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 29/310 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  L+  +   GC+P+  TYS L++GLC+ G    A+ L  EM        VV      
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 56  ---CKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                     ++  Y  +I  LCK+G +D+A  L+ +M+ +  N
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+ +YN++I   C      EA+ +F  ++++GV  N +T++ I+  L ++G+ ++A +L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI  G   +   YN L+   C  G V+R+  L   M   G K N  SY+ILI+  CK
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + +  AL L  +ML++G+ P +VTYNTL  GL ++  +  A  L +++    V  D   
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 273 YRTFIDGLCK 282
           Y   I   CK
Sbjct: 629 YNILISWHCK 638



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 6/326 (1%)

Query: 78  KAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSV 135
           +A  LL Q+  +  + P   +YN V+     A+   +A  L+  M+ +  V P   TF V
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
               LC+ G+  EA  LL  M + G  P+A +Y T++   C  G V  A  L   M  MG
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V ++  ++ G C    +  A  L   M++KG  P V+TY  L  GL  + Q + A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +   +    V      + T I G    G + EA EL+ T+ +  C+ D  +YS L+ GL
Sbjct: 301 AMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GR+  A  L   + +     +VVTY I++H+ C +G  D    L  +M AKG+  + 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
             +N ++    ++    + + L+  M
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEM 442



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 2/189 (1%)

Query: 219 ALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTF 276
           AL L  ++  + G++P+  +YN +   L        A  L+  M  R  V   T+ +   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
              LC+ G   EAL L R +    C  D   Y  +I  LC  G +  A  L + +     
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
            ADV T++ ++  +C  G++ +A  L   M  KG  P  + +  L+ G  R  +  +   
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 397 LLHRMDERN 405
           +L R+ E N
Sbjct: 302 MLGRVPELN 310


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 205/391 (52%), Gaps = 6/391 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PNV+T + +I+ LC+      A ++FE M +       +C PD V + ++IDG
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK------ICSPDEVTFCSLIDG 486

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L K+G VD A  L  QM D +  P+ V Y S+I+ F       +  ++F EM+ +G  P+
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPD 546

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +   +  MD + K G+  +   L E +   G  P+   Y+ L+ G    G      ELF 
Sbjct: 547 LRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFY 606

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           +M+  GC  +  +Y+  I+G+CK+ ++  A  L  EM +KG +PTVVTY ++  GL +I 
Sbjct: 607 AMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKID 666

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E + +G+  +   Y + IDG  K G I EA  +   L       ++ +++
Sbjct: 667 RLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 726

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+D L K+  +  A   F ++       + +TY+I+I+ LC   K +KA   + +M+ +
Sbjct: 727 CLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQ 786

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           G+ P+ + + T++ G  +    ++   L  R
Sbjct: 787 GLKPNTITYTTMIAGLAKAGNIAEASSLFER 817



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  + KA GC P+VI Y+ ++  L + G    AL  FEEM            P+  
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKD-------AAPNLS 408

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G V+ A ++   MK+  + P+V+T N +I   C A   +EA  +F  M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+ VTF  ++D L K G++++A +L E M+     PNA VY +L+  F   GR 
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ++F  M   GC  ++   +  ++   K  E     +L+ E+ S+G  P V++Y+ L
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +       ++LF  M+  G   DT AY TFIDG CK+G + +A +L   ++    
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y  +IDGL K  RL  A+ LF       L  +VV Y+ +I      G++D+A+ 
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYL 708

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  ++  KG+ P+   +N L+   ++  E ++ +     M
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 205/383 (53%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  +    C P+ +T+ +LI+GL + G    A  L+E+M++ +        P+AV
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK------IPNAV 513

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I    K G  +   ++  +M  +  +PD+   N+ +     A ++ + + LF E+
Sbjct: 514 VYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI 573

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V+++S+++  L K G   E  +L   M + G   +   YNT +DGFC +G+V
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A +L   M++ G +  V +Y  +I+G  K   ++ A  L+ E  S G++  VV Y++L
Sbjct: 634 NKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSL 693

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  + + +   +D L K   I EAL  F+ ++ LK 
Sbjct: 694 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L  + +TY  MI  L   G + +A  
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF   +A G  PD  ++N ++ G
Sbjct: 814 LFERFKANGGVPDSASYNAIIEG 836



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 171/313 (54%), Gaps = 6/313 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++K+ G  P+V++YS LI+GL + G       LF  M     E G  C  D   Y 
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM----KEQG--CVLDTHAYN 621

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E    
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV +S ++D   K G+++EA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F +M+++    N  +YSILING C+ ++   A   + EM  +G+KP  +TY T+  G
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LF+  + +G   D+ +Y   I+GL  +   +EA ++F   R+  C + 
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIH 861

Query: 305 IRSYSCLIDGLCK 317
            ++   L+D L K
Sbjct: 862 TKTCIALLDALQK 874



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 188/395 (47%), Gaps = 7/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++ F   P    Y+TLI  L     + + L LF +M     E  V       ++TT+I  
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVH------LFTTVIRV 242

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
             +EG +D A  LL +MK   ++ D+V YN  I  F  A   + A + F E+   G+ P+
Sbjct: 243 FAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPD 302

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT++ ++  LCK  +++EA ++ E M Q    P A+ YNT++ G+   G+ + A  L  
Sbjct: 303 DVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE 362

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
             ++ GC  +V +Y+ ++    K   +  AL  + EM  K   P + TYN L   L +  
Sbjct: 363 RQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAG 421

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +VE AFK+ D M+  G+  +       ID LCK   + EA  +F  +    C  D  ++ 
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGL K GR+  A+ L+  +     I + V Y  +I +    G+ +  H +F +M  +
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G +PD    N  M    +  ET K   L   +  R
Sbjct: 542 GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 6/324 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F ++   GC P++   +  ++ + + G T     LFEE I   G       PD + Y+ 
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE-IKSRGFI-----PDVMSYSI 587

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I GL K GF  +  EL   MK++    D   YN+ I GFC +   N+A +L  EM  +G
Sbjct: 588 LIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            QP VVT+  ++D L K  +++EA  L E     G+  N  +Y++L+DGF   GR++ A 
Sbjct: 648 RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAY 707

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   +   G   NV++++ L++   K +EI  AL  +  M +    P  +TY+ L  GL
Sbjct: 708 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGL 767

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             + +  +AF  + EMQ+ G+  +T  Y T I GL K G I EA  LF   +      D 
Sbjct: 768 CRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDS 827

Query: 306 RSYSCLIDGLCKSGRLKIAWELFH 329
            SY+ +I+GL  S R   A+++F 
Sbjct: 828 ASYNAIIEGLSYSRRAMEAYKIFE 851



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 36/378 (9%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+A  Y +++  + K    D  +++L +M      P   T   +I     +N   E   L
Sbjct: 128 PEA--YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDL 185

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M     +P    ++ ++  L    + +    L   M ++G   +  ++ T++  F  
Sbjct: 186 IQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAR 245

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR++ A  L   M+S     ++  Y++ I+ + K  +++ A   + E+ S G+ P  VT
Sbjct: 246 EGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVT 305

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y ++   L + ++++ A ++F++M+++      +AY T I G    G   EA  L    +
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365

Query: 298 ILKCELDIRSYSC----------------------------------LIDGLCKSGRLKI 323
              C   + +Y+C                                  LID LCK+G ++ 
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEA 425

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A+++  ++    L  +V+T NIMI  LC   K+D+A  +F  M  K  +PD V F +L+ 
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485

Query: 384 GCIRNNETSKVVELLHRM 401
           G  +         L  +M
Sbjct: 486 GLGKQGRVDDAYRLYEQM 503



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 85/193 (44%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+ ++     L   M     +P    Y TL   L  + + +    LF +MQ  G      
Sbjct: 175 KSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVH 234

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            + T I    + G +  AL L   ++      DI  Y+  ID   K+G++ +AW+ FH +
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L+ D VTY  MI  LC   ++D+A ++F  ME     P   A+NT+++G     + 
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354

Query: 392 SKVVELLHRMDER 404
            +   LL R   R
Sbjct: 355 DEAYSLLERQKAR 367


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 210/410 (51%), Gaps = 19/410 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ A GC PN  TY+ L++GLC+ G    AL +F+EM++     G++  P+  I
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKI 244

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT ++  LC  G +D+A +LL  MKDK   PD VTYN+ + G C     NEA +  + + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G    +  +S ++D L +  + +E     + M++  + P+  +Y  ++ G    GR+ 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A      M+  G   + F Y+ ++   C + ++E A +L SEML   +     T   + 
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI---- 298
            GL +   V+ A ++FDEM  HG       Y   IDG  + G + EA  LF  + +    
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 299 ---LKCEL------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
              L+  L      D  S   L+  +C+SG++  A++L  S+    ++ DVVTYN +I+ 
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LC    +D A  LF +++ KG++PD + + TL+ G +R +  +  + L  
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 196/448 (43%), Gaps = 57/448 (12%)

Query: 5   ALFTKL---KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A+F  L   +A G   +   ++ L+      G    A+  F  M     EF    +P A 
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM----DEFQ--SRPTAF 173

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TI+  L   G +  A  L  +M      P+  TYN ++ G C    + +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PNV  ++V++  LC  GK++EA QLL  M   G  P+   YN  + G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I P VV Y  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID----------------------- 278
             G  E  ++E A    D M++ G   DT+ Y T +                        
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 279 ------------GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                       GLCK G + EA+++F  +    C+  + +Y+ LIDG  + GRL+ A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 327 LFHSLPRG-------------VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           LFH +  G               + D  +   ++H +C  G++ KA+ L   +   GV P
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V +NTL+ G  +       V L   +
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKEL 561



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 202/409 (49%), Gaps = 19/409 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++   G  PNV  Y+ L++ LC  G    A+ L   M +        C PD V
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG------CLPDEV 278

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   + GLCK G V++A + L+ ++D      +  Y+ +I G   A   +E    +  M
Sbjct: 279 TYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+VV +++++    + G++E+A   L++M + G  P+ F YNT++   C  G +
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  L   M       +  + +I+I G CK   ++ A+ ++ EM   G  PTV+TYN L
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458

Query: 242 FIGLFEIHQVERAFKLFDEMQ---------RHGVAA----DTWAYRTFIDGLCKNGYIVE 288
             G +   ++E A  LF +M+         R  + A    D+ + R  +  +C++G +++
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLK 518

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A +L R++       D+ +Y+ LI+GLCK+  L  A  LF  L    +  D +TY  +I 
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            L    + + A  LF ++   G +P    +N++M    R  + S+ + L
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 196/454 (43%), Gaps = 61/454 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC-- 56
           EA  L   +K  GC P+ +TY+  ++GLC+ G    A      + +G    G  G  C  
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V+YT +I G  + G ++ A   L  MK K   
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD   YN+V++  C   D   A  L  EM+   +  +  T ++++  LCK G ++EA Q+
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF----------- 201
            + M + G  P    YN L+DGF   GR+  A+ LF  ME MG   ++F           
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRLTLGANQVR 498

Query: 202 ---SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
              S   L++  C++ ++  A  L   ++  G+ P VVTYNTL  GL +   ++ A +LF
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            E+Q  G++ D   Y T IDGL +     +A+ LF+ +        +  Y+ ++  LC+ 
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 319 GRLKIAWELF-HSLPRGVLIADVVTYNIMI--------HALCADGKMDKAHDLFLDMEAK 369
            +L  A  L+   LP+         YN  +        H    DG +D      + ++ +
Sbjct: 619 KKLSQAINLWLDYLPK--------KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQE 670

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +     +   ++G  +   T   + + H + E
Sbjct: 671 YGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQE 704



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 153/309 (49%), Gaps = 26/309 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-------FGV 54
           EA  +F ++   GC+P V+TY+ LI+G  R G    A  LF +M  GN          G 
Sbjct: 435 EAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGA 494

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
               D+     ++  +C+ G V KA +LL  + D  + PDVVTYN++I G C A + + A
Sbjct: 495 NQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGA 554

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            RLF E+  +G+ P+ +T+  ++D L +  +  +A  L + ++Q G  P+  +YN++M  
Sbjct: 555 VRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRS 614

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYS-ILINGYCKNKEIE-GAL--------SLYS 224
            C   ++++A  L+  ++ +  K+N    S +L N +   KEIE G+L         +  
Sbjct: 615 LCRMKKLSQAINLW--LDYLPKKYNFPVESEVLANAH---KEIEDGSLDDGVRELIKIDQ 669

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E  S    P    Y    IGL ++ + + A ++F  +Q  G+          I+ LC + 
Sbjct: 670 EYGSISSNP----YTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDR 725

Query: 285 YIVEALELF 293
            +  A+++ 
Sbjct: 726 NLNAAVDIM 734



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 134/307 (43%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            + +++     A    +A + F  M +   +P    ++ I+  L  +G +  A  L   M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G  PN   YN LMDG C  G    A ++F  M   G   NV  Y++L++  C   +I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L   M  KG  P  VTYN    GL ++ +V  AF+    +Q  G A     Y   
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDGL +     E    ++T+       D+  Y+ +I G  ++GR++ A      + +   
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + D   YN ++  LC  G +++AH L  +M    +  D      ++ G  +     + ++
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438

Query: 397 LLHRMDE 403
           +   M E
Sbjct: 439 IFDEMGE 445



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 183/420 (43%), Gaps = 59/420 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +    +K  G  P+   Y+T++  LC  G    A  L  EM+  N         D+ 
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL------DST 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I GLCK G VD+A ++  +M +   +P V+TYN++I GF Y     E  R+    
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF-YREGRLEEARMLFHK 477

Query: 122 MDQGVQPNVV--------------TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           M+ G  P++               +   ++ ++C++G++ +A +LL  +I  GV P+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YNTL++G C    ++ A  LF  ++  G   +  +Y  LI+G  +      A+ L+  +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLF----------------------------- 258
             G  P++  YN++   L  + ++ +A  L+                             
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSL 657

Query: 259 DEMQRHGVAAD-------TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           D+  R  +  D       +  Y  ++ GLC+     +AL +F TL+    ++     + L
Sbjct: 658 DDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALL 717

Query: 312 IDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           I+ LC    L  A + + ++L + ++++  V  N ++  LC   +   A  L   M   G
Sbjct: 718 INYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLCICYRRQDAQALAWRMHLVG 776



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 19/278 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L   +   G  P+V+TY+TLINGLC+  +   A+ LF+E+ + G         PD
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG-------ISPD 569

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y T+IDGL +    + A  L   +     +P +  YNS++R  C     ++A  L++
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 120 EMMDQGVQPNVVTFSVIMDELC------KNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           + +     P    F V  + L       ++G +++  + L  + Q     ++  Y   + 
Sbjct: 630 DYL-----PKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLI 684

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   R + A  +F +++  G        ++LIN  C ++ +  A+ +    LSK I  
Sbjct: 685 GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIIL 744

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +    N L   L   ++ + A  L   M   G   D +
Sbjct: 745 SQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 205/367 (55%), Gaps = 11/367 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK--- 72
           +PNV T++ +IN LC+TG    A ++ E+M      +G    P+ V Y T+IDG CK   
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDM----KVYGY--SPNVVSYNTLIDGYCKLGG 273

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G + KA  +L +M +  ++P++ T+N +I GF   ++   + ++F EM+DQ V PNV+T
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +++ LC  GK+ EA  + + M+  GV+PN   Y++L++GFC  G +  A ++F S++
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G +     Y++LI+ YCK  +I+   +L  EM  +GI P V TYN L  GL     +E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A KLFD++   G+  D   +   ++G C  G   +A  L + +  +  +    +Y+ ++
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 313 DGLCKSGRLKIAWELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            G CK G LK A  +   + +   L  +V +YN+++      GK++ A+ L  +M  KG+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 372 APDCVAF 378
            P+ + +
Sbjct: 573 VPNRITY 579



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 168/298 (56%), Gaps = 4/298 (1%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           N S + + L+ EM+ + +QPNV TF+V+++ LCK GKM +A  ++E M   G  PN   Y
Sbjct: 202 NRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSY 261

Query: 169 NTLMDGFCL---TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           NTL+DG+C     G++ +A  +   M       N+ +++ILI+G+ K+  + G+L ++ E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML + + P V+TYN+L  GL    ++  A  + D+M   GV  +   Y + I+G CKNG 
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           + EAL++F +++        R Y+ LID  CK G++   + L   + R  ++ DV TYN 
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I  LC +G ++ A  LF  +  KG+ PD V F+ LM G     E+ K   LL  M +
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSK 498



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 187/357 (52%), Gaps = 11/357 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCR---TGHTIVALNLFEEMINGNGEFGVVCKP 58
           +A  +   +K +G  PNV++Y+TLI+G C+    G    A  + +EM+           P
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENE------VSP 294

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +   +  +IDG  K+  +  + ++  +M D+++ P+V+TYNS+I G C     NEA  + 
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMR 354

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GVQPN++T+  +++  CKNG M+EA  + + +   G RP   +YN L+D +C  
Sbjct: 355 DKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL 414

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+++    L   ME  G   +V +Y+ LI G C+N  IE A  L+ ++ +KG+ P +VT+
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTF 473

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-R 297
           + L  G     +  +A  L  EM + G+      Y   + G CK G +  A  +   + +
Sbjct: 474 HILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
             +  +++ SY+ L+ G  + G+L+ A  L + +    L+ + +TY I+   +   G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 178/351 (50%), Gaps = 11/351 (3%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           CKP       ++  L K+      + L  +M  + I P+V T+N VI   C     N+A+
Sbjct: 191 CKP-------LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCK---NGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
            +  +M   G  PNVV+++ ++D  CK   NGKM +A  +L+ M++  V PN   +N L+
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DGF     +  + ++F  M       NV +Y+ LING C   +I  A+ +  +M+S G++
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P ++TY++L  G  +   ++ A  +FD ++  G    T  Y   ID  CK G I +   L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +       D+ +Y+CLI GLC++G ++ A +LF  L    L  D+VT++I++   C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCS 482

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G+  KA  L  +M   G+ P  + +N +M G  +         +  +M++
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 147/273 (53%), Gaps = 8/273 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNVITY++LINGLC  G    A+ + ++M++     GV  +P+ + Y ++I+G CK G +
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSA----GV--QPNLITYHSLINGFCKNGMM 382

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A ++   +K +   P    YN +I  +C     ++   L  EM  +G+ P+V T++ +
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC+NG +E A +L + +   G+ P+   ++ LM+G+C  G   +A  L   M  MG 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGL 501

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           K    +Y+I++ GYCK   ++ A ++ ++M   + ++  V +YN L  G  +  ++E A 
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            L +EM   G+  +   Y    + +   G++ +
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 141/349 (40%), Gaps = 49/349 (14%)

Query: 100 SVIRGFCYANDSNEAKRLF--IEMMDQGVQPNVVTFSVIMDEL----CKNGKMEEASQLL 153
           S + GF      ++   +F  I M D     NV   S+I D L      N + E   +  
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCD-----NVCVNSIIADMLVLAYANNSRFELGFEAF 176

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           +     G + +A     LM       R    + L+  M     + NVF+++++IN  CK 
Sbjct: 177 KRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKT 236

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNT--------------------------------- 240
            ++  A  +  +M   G  P VV+YNT                                 
Sbjct: 237 GKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNL 296

Query: 241 -----LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                L  G ++   +  + K+F EM    V  +   Y + I+GLC  G I EA+ +   
Sbjct: 297 TTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDK 356

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +     + ++ +Y  LI+G CK+G +K A ++F S+           YN++I A C  GK
Sbjct: 357 MVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGK 416

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D    L  +ME +G+ PD   +N L+ G  RN       +L  ++  +
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 202/405 (49%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDA 60
           EA     KL   G EP+  TY+TLI G C+ G   +A     E I  N  F G V  PD 
Sbjct: 304 EAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLA-----ERILVNAVFNGFV--PDE 356

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y ++IDGLC EG  ++A  L  +   K I P+V+ YN++I+G        EA +L  E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASE 416

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P V TF+++++ LCK G + +A  L+++MI  G  P+ F +N L+ G+    +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+   M   G   +V++Y+ L+NG CK  + E  +  Y  M+ KG  P + T+N 
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-IL 299
           L   L   H++++A  L +EM+   V  D   + T IDG CKNG +  A  LFR +  + 
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                  +Y+ +I    +   + +A +LF  +    L  D  TY +M+   C  G +D  
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   L+M   G  P       ++      +   +   ++HRM ++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 209/404 (51%), Gaps = 8/404 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV-VCKPDAV 61
           A  L   + + GCE NV+ Y T++ G            LF +M+      GV +C     
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLAS----GVSLC---LS 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++  LCK+G V + ++LL ++  + + P++ TYN  I+G C   + + A R+   +
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQG +P+VVT++ ++  LCKN K +EA   L  ++  G+ P++F YNTL+ G+C  G V
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ + V+    G   + F+Y  LI+G C   E   AL+L++E L KGIKP V+ YNTL
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +  A +L  EM   G+  +   +   ++GLCK G + +A  L + +     
Sbjct: 398 IKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +++ LI G     +++ A E+   +    +  DV TYN +++ LC   K +   +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  M  KG AP+   FN L+    R ++  K + LL  M  ++
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 196/383 (51%), Gaps = 7/383 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +L   G +P+V+TY+ LI GLC+      A     +++N   E      PD+  
Sbjct: 270 AVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE------PDSFT 323

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I G CK G V  A+ +L+        PD  TY S+I G C+  ++N A  LF E +
Sbjct: 324 YNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEAL 383

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++PNV+ ++ ++  L   G + EA+QL   M + G+ P    +N L++G C  G V+
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVS 443

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M S G   ++F+++ILI+GY    ++E AL +   M+  G+ P V TYN+L 
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLL 503

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + E   + +  M   G A + + +   ++ LC+   + +AL L   ++     
Sbjct: 504 NGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVN 563

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHD 361
            D  ++  LIDG CK+G L  A+ LF  +    +++    TYNI+IHA      +  A  
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEK 623

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           LF +M  + + PD   +  ++ G
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDG 646



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 205/402 (50%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF K+ A G    + T++ L++ LC+ G       L +++I    + GV+  P+  
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI----KRGVL--PNLF 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   I GLC++G +D A  ++ ++ D+   PDVVTYN +I G C  +   EA+    ++
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++P+  T++ ++   CK G ++ A ++L   +  G  P+ F Y +L+DG C  G  
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NRA  LF      G K NV  Y+ LI G      I  A  L SEM  KG+ P V T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL ++  V  A  L   M   G   D + +   I G      +  ALE+   +     
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ L++GLCK+ + +   E + ++       ++ T+NI++ +LC   K+DKA  
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L  +M+ K V PD V F TL+ G  +N +      L  +M+E
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 198/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++  + CEP V +Y+ +++ L  +G+   A  ++  M     + G+   PD  
Sbjct: 94  EAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM----RDRGIT--PDVY 147

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T  +   C+      A  LL  M  +    +VV Y +V+ GF   N  +E   LF +M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV   + TF+ ++  LCK G ++E  +LL+ +I+ GV PN F YN  + G C  G +
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   +   G K +V +Y+ LI G CKN + + A     +++++G++P   TYNTL
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+ A ++      +G   D + YR+ IDGLC  G    AL LF        
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LI GL   G +  A +L   +    LI +V T+NI+++ LC  G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M +KG  PD   FN L+ G     +    +E+L  M
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 11/292 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA L +++   G  P V T++ L+NGLC+ G    A  L + MI+  G F     PD 
Sbjct: 408 LEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYF-----PDI 461

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  +I G   +  ++ A E+L  M D  ++PDV TYNS++ G C  +   +    +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN+ TF+++++ LC+  K+++A  LLE M    V P+A  + TL+DGFC  G 
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 181 VNRAKELFVSMES---MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           ++ A  LF  ME    + C  +  +Y+I+I+ + +   +  A  L+ EM+ + + P   T
Sbjct: 582 LDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           Y  +  G  +   V+  +K   EM  +G           I+ LC    + EA
Sbjct: 640 YRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 163/343 (47%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   +    ++G V +A  +  +M   +  P V +YN+++     +   ++A ++++ M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+V +F++ M   C+  +   A +LL  M   G   N   Y T++ GF      
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ELF  M + G    + +++ L++  CK  +++    L  +++ +G+ P + TYN  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A ++   +   G   D   Y   I GLCKN    EA      L     
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI G CK G +++A  +  +      + D  TY  +I  LC +G+ ++A  
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +   KG+ P+ + +NTL+ G        +  +L   M E+
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEK 420



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V TY++L+NGLC+T      +  ++ M+         C P+   +  +++ LC+ 
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG------CAPNLFTFNILLESLCRY 544

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD-QGVQPNVVT 132
             +DKA  LL +MK+K++NPD VT+ ++I GFC   D + A  LF +M +   V  +  T
Sbjct: 545 HKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT 604

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           +++I+    +   +  A +L + M+   + P+ + Y  ++DGFC TG V+   +  + M 
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM 664

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             G   ++ +   +IN  C    +  A  +   M+ KG+ P  V  NT+F
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF 712



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 44/196 (22%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN+ T++ L+  LCR      AL L EEM N +        PDAV + T+IDG CK 
Sbjct: 526 GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS------VNPDAVTFGTLIDGFCKN 579

Query: 74  GFVDKA------------------------------------KELLLQMKDKNINPDVVT 97
           G +D A                                    ++L  +M D+ + PD  T
Sbjct: 580 GDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++ GFC   + +   +  +EMM+ G  P++ T   +++ LC   ++ EA+ ++  M+
Sbjct: 640 YRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699

Query: 158 QIGVRPNAFVYNTLMD 173
           Q G+ P A   NT+ D
Sbjct: 700 QKGLVPEAV--NTIFD 713


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 56/459 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL------------------FE 43
           EA     ++K    E N++TY++L+NGLC +G    A  +                  F+
Sbjct: 245 EALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFD 304

Query: 44  EMINGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
           +  NG G+ G+      + D   Y  +++GLC+ G ++KA+E+L ++ +  + P  ++YN
Sbjct: 305 DHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            ++  +C   D  +A     +M ++G++PN +TF+ ++ + C+ G+++ A   +  M++ 
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV P    YN+L++G+   G   R  E    M+  G K NV SY  LIN  CK++++  A
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             + ++M+ +G+ P    YN L      + +++ AF+ FDEM + G+ A    Y T I+G
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL------------ 327
           L +NG + +A +LF  +    C  D+ +Y+ LI G  KS   +   EL            
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604

Query: 328 ---FHSL-----PRGV--------------LIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              FH L       GV              L+ D   YN MI++   DG + KA  L   
Sbjct: 605 VGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQ 664

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M  +GV  D V +N+L+L  +R+   S++  L+  M  +
Sbjct: 665 MVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 214/498 (42%), Gaps = 104/498 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L++ ++  G  P+  + + L+  L  + H    L +F ++I+         +PDAV
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG------TRPDAV 158

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   +        +DK  EL+  M    + P V  YN V+ G C      +A++LF EM
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PN VT++ ++D  CK G +EEA    E M +  V  N   YN+L++G C +GRV
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278

Query: 182 NRAKELFVSMESMGCKHNVF----------------------------SYSILINGYCKN 213
           + A+E+ + ME  G     F                            +Y IL+NG C+ 
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA------ 267
             IE A  + ++++  G+ P+ ++YN L     +   V++A    ++M+  G+       
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 268 ---------------ADTW--------------AYRTFIDGLCKNGYIVEALELFRTLRI 298
                          A+TW               Y + I+G  + G+ V   E    +  
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 299 LKCELDIRSYSCLIDGLCKS-----------------------------------GRLKI 323
              + ++ SY  LI+ LCK                                     +LK 
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A+  F  + +  + A +VTYN +I+ L  +G++ KA DLFL M  KG  PD + +N+L+ 
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLIS 578

Query: 384 GCIRNNETSKVVELLHRM 401
           G  ++  T K +EL  +M
Sbjct: 579 GYAKSVNTQKCLELYDKM 596



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 177/387 (45%), Gaps = 42/387 (10%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G EPN IT++T+I+  C TG    A      M+    E GV   P    Y ++I+
Sbjct: 385 QMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLIN 438

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G  ++G   +  E L +M    I P+V++Y S+I   C      +A+ +  +M+ +GV P
Sbjct: 439 GYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           N   ++++++  C   K+++A +  + MIQ G+      YNTL++G    GRV +A++LF
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT----------- 237
           + M   GC  +V +Y+ LI+GY K+   +  L LY +M   GIKPTV T           
Sbjct: 559 LQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE 618

Query: 238 -----------------------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
                                  YN +     E   V +A  L  +M   GV  D   Y 
Sbjct: 619 GVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYN 678

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PR 333
           + I    ++  + E   L   ++       + +Y+ LI GLC       A+  +  +  R
Sbjct: 679 SLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVER 738

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAH 360
           G+L+   + Y  +I  L  +G + +A 
Sbjct: 739 GLLLNVSMCYQ-LISGLREEGMLREAQ 764



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 161/329 (48%), Gaps = 7/329 (2%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A +L   M+     P   + N ++R    +    +   +F +++D G +P+ V +  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            +        +++  +L++ M++ G+ P+ F YN ++ G C   R+  A++LF  M    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+GYCK   IE AL     M  + ++  +VTYN+L  GL    +V+ A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  EM+  G     +    F D    NG   + L   + +RI     D R+Y  L++GL
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDH--SNGAGDDGLFDGKEIRI-----DERTYCILLNGL 335

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ GR++ A E+   L    +    ++YNI+++A C +G + KA      ME +G+ P+ 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + FNT++       E       + RM E+
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEK 424



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 14/305 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +   +   G  PN   Y+ LI   C       A   F+EMI              
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG------IDATL 535

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I+GL + G V KA++L LQM  K  NPDV+TYNS+I G+  + ++ +   L+ +
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P V TF  ++   C+   +    ++ + M+Q+ + P+ FVYN ++  +   G 
Sbjct: 596 MKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGN 654

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V +A  L   M   G   +  +Y+ LI  Y +++ +     L  +M +KG+ P V TYN 
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++     A+  + EM   G+  +       I GL + G + EA       +I+ 
Sbjct: 715 LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA-------QIVS 767

Query: 301 CELDI 305
            EL I
Sbjct: 768 SELSI 772



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 35/193 (18%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K ++ A  LYS M   G  P+  + N L   L +    E+   +F ++   G   D  A
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA 159

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y          G  V+A  + + L                            +EL  S+ 
Sbjct: 160 Y----------GKAVQAAVMLKDL-------------------------DKGFELMKSMV 184

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +  +   V  YN+++  LC   ++  A  LF +M  + + P+ V +NTL+ G  +     
Sbjct: 185 KDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIE 244

Query: 393 KVVELLHRMDERN 405
           + +    RM E+N
Sbjct: 245 EALGFKERMKEQN 257


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 197/402 (49%), Gaps = 6/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +++ G  P   +YS LI+GLC+ G    AL+L EEM+  N       KP  V
Sbjct: 341 EAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN------VKPSLV 394

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++ DGLCK G  + +  +   +  +    DV++YN++I GF    D   A +L  EM
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM 454

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  TF+ ++   CK  ++++A ++  +M+++GV+ N F  N + D F   G  
Sbjct: 455 RMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHF 514

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   ++ +G   N ++Y+I+I   CK ++ E A  +   ML   + P  + YNTL
Sbjct: 515 WEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTL 574

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +     +A  L+ +M + G+      Y   I+       + EA  LF+ +     
Sbjct: 575 IDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGL 634

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   ++C+I G CK G +K AW L+  + +     +VVTY  +I       +MDKA  
Sbjct: 635 VPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADF 694

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           LF  M+   V PD + +  L+ G      + +V E+ + M E
Sbjct: 695 LFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKE 736



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 209/439 (47%), Gaps = 46/439 (10%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGH-----TIVALNLFEEMINGNGEFGVVCKPD 59
           +LF +LK  G  PNV TY+ ++N  C+         + A  + EEM   NGE      P 
Sbjct: 234 SLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGE-----SPT 287

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y   I GLC+ G V+ A  L+  ++ +N   +   YN+VI  FC   + +EA  L  
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M   G+ P   ++S+++D LCK G++E+A  L+E M+Q  V+P+   Y++L DG C +G
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               +  +F ++ + G KH+V SY+ LING+   +++  A  L  EM   G  P   T+N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  G  +  ++++A ++F  M + GV  + +      D   + G+  EAL+L   ++ L
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELF------------------------HSLPRGV 335
               +  +Y+ +I  LCK  + + AWE+                          S P   
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 336 LI-----------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           L+             +VTY ++I+      KM +A+ LF +M  KG+ PD + F  ++ G
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 385 CIRNNETSKVVELLHRMDE 403
             +  +      L   M +
Sbjct: 648 FCKVGDMKSAWALYEEMSQ 666



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 210/406 (51%), Gaps = 11/406 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++AA +F + + FG E N+++ + L+N       T    +LFEE+ +          P+ 
Sbjct: 195 VDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPS------PNV 248

Query: 61  VIYTTIIDGLCKEGF-----VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
             YT +++  CK  F     + KA E+L +M+    +P VVTY + I G C A     A 
Sbjct: 249 FTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFAL 308

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           RL  ++  +    N   ++ ++ E C+NG++ EA +LLE M   G+ P A+ Y+ L+DG 
Sbjct: 309 RLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGL 368

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G+V +A +L   M     K ++ +YS L +G CK+   E +LS++  + ++G K  V
Sbjct: 369 CKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDV 428

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++YNTL  G      +  A KL  EM+ +G   +++ +   I G CK   + +ALE+F  
Sbjct: 429 ISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTI 488

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  +L+I + + + D   + G    A +L + +    ++ +  TYNI+I  LC + K
Sbjct: 489 MLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQK 548

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +KA ++   M    V P  + +NTL+ G  + +  +K + L  +M
Sbjct: 549 TEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 148/274 (54%), Gaps = 6/274 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +FT +   G + N+ T + + +   R GH   AL L    IN   + G+V  P++ 
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKL----INEVQDLGIV--PNSY 534

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCKE   +KA E+L  M   N+ P  + YN++I G+   ++  +A  L+ +M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P++VT++++++      KM+EA  L + MI+ G+ P+  ++  ++ GFC  G +
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   G   NV +Y+ LI+GY K K ++ A  L+++M    + P  +TY  L
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTAL 714

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
             G   +   +R  ++F+EM+ +GV  +  AY T
Sbjct: 715 IFGYQSLGYSDRVREMFNEMKENGVFPNYTAYAT 748



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 5/316 (1%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++   +I    +   +  A ++ +Q +   +  ++++ N ++  F  AN +   + LF E
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238

Query: 121 MMDQGVQPNVVTFSVIMDELC-----KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           + D G  PNV T++++M+  C     KN  + +A+++LE M   G  P    Y   + G 
Sbjct: 239 LKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V  A  L   +       N + Y+ +I+ +C+N E+  A  L  +M S GI PT 
Sbjct: 299 CRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTA 358

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            +Y+ L  GL +  QVE+A  L +EM +  V      Y +  DGLCK+G    +L +F  
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHN 418

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           L     + D+ SY+ LI+G      +  A +L H +     + +  T+N +IH  C   +
Sbjct: 419 LGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQR 478

Query: 356 MDKAHDLFLDMEAKGV 371
           +DKA ++F  M   GV
Sbjct: 479 LDKALEVFTIMLKVGV 494



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 5/325 (1%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL   +D ++   ++  N +I+ F   N   +A  +F++    G++ N+++ + +++   
Sbjct: 165 LLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFA 224

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG-----RVNRAKELFVSMESMGC 196
           +  + E    L E +   G  PN F Y  +M+ +C         + +A E+   ME  G 
Sbjct: 225 EANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGE 284

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              V +Y   I+G C+   +E AL L  ++  +        YN +        ++  AF+
Sbjct: 285 SPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFE 344

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L ++M+ HG++   ++Y   IDGLCK G + +AL+L   +     +  + +YS L DGLC
Sbjct: 345 LLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLC 404

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KSG  +I+  +FH+L       DV++YN +I+       M  A  L  +M   G  P+  
Sbjct: 405 KSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSF 464

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            FN L+ G  +     K +E+   M
Sbjct: 465 TFNRLIHGFCKRQRLDKALEVFTIM 489



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 17/327 (5%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN----VVTFSVIMDE 139
           LQM+ +    D+++Y        Y   + +   LF  ++D     +    ++  +V++  
Sbjct: 136 LQMEVQIFLRDIISY--------YKEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKV 187

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             +N  + +A+ +     + G+  N    N L++ F    +    + LF  ++  G   N
Sbjct: 188 FAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPN 247

Query: 200 VFSYSILINGYC-----KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           VF+Y+I++N YC     KN +I  A  +  EM   G  PTVVTY     GL     VE A
Sbjct: 248 VFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFA 307

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L  +++      +++ Y   I   C+NG + EA EL   +R         SYS LIDG
Sbjct: 308 LRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDG 367

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G+++ A +L   + +  +   +VTY+ +   LC  G  + +  +F ++ A+G   D
Sbjct: 368 LCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHD 427

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
            +++NTL+ G +   +     +L+H M
Sbjct: 428 VISYNTLINGFVLQRDMGSACKLVHEM 454



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  PN  TY+ +I  LC+   T  A  +   M+  N        P A+
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNN------VFPCAI 569

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG  K+    KA  L  +M    I P +VTY  +I  F   +   EA  LF EM
Sbjct: 570 HYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ + F+ I+   CK G M+ A  L E M Q G  PN   Y  L+DG+    R+
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF  M+      +  +Y+ LI GY      +    +++EM   G+ P    Y TL
Sbjct: 690 DKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749

Query: 242 FIGL 245
            + L
Sbjct: 750 GLHL 753


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 210/424 (49%), Gaps = 25/424 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----------ING--- 48
           A  LF K+   G   +V++Y+TLI GLC  G    A+ LF EM           + G   
Sbjct: 207 ARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCN 266

Query: 49  --NGEFGVV---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
              GE G++          +P    Y  ++D  C+E    +A+E+L +M +K + P VVT
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
             +VI  +C     ++A R+   M  +G +PNV T++ ++   C  GK+ +A  LL  M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GV P+A  YN L+ G C+ G +  A  L   ME  G   + ++Y+ LIN  CK+   +
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  + ++GIKP  VT+N+L  GL +  + + A+K  ++M   G   DT+ Y +FI
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LCK     E L     +     +    +Y+ +I  L K     +    +  +      
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVVTY   + A C +G++++A ++ ++M   GV  D +A+NTLM G     +T   V +
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 398 LHRM 401
           L +M
Sbjct: 627 LKQM 630



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 193/370 (52%), Gaps = 12/370 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCK 72
           G  P+  T+++LI G CRT    VA +LF++M + G  +       D V Y T+I+GLC+
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-------DVVSYATLIEGLCE 235

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G +D+A EL  +M      PD+  Y ++++G C A    E   +   M + G +P+   
Sbjct: 236 AGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 291

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D  C+  K +EA ++L+ M + G+ P       +++ +C  GR++ A  +   M+
Sbjct: 292 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GCK NV++Y+ L+ G+C   ++  A++L ++M + G+ P  VTYN L  G      +E
Sbjct: 352 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 411

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+L   M+  G+ AD + Y   I+ LCK+G   +A  LF +L     + +  +++ LI
Sbjct: 412 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 471

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCKSG+  IAW+    +       D  TY+  I  LC      +      +M  K V 
Sbjct: 472 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 531

Query: 373 PDCVAFNTLM 382
           P  V +  ++
Sbjct: 532 PSTVNYTIVI 541



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 9/380 (2%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           +++L+  L R     +AL LF  M            P A  Y  +I  LC+   + +A  
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHM-----HRHAPPAPTAPTYNAVIRSLCRRADLARALR 174

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            L  M      PD  T+NS+I G+C  N  + A+ LF +M  +G   +VV+++ +++ LC
Sbjct: 175 YLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLC 234

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + G+++EA +L   M Q    P+  +Y  L+ G C   R      +   M+ +G + +  
Sbjct: 235 EAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTR 290

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ +++  C+ ++ + A  +  EM  KG+ P VVT   +     +  ++  A ++ + M
Sbjct: 291 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 350

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G   + W Y   + G C  G + +A+ L   +R      D  +Y+ LI G C  G +
Sbjct: 351 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 410

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A+ L   +    LIAD  TYN +I+ALC DG+ D+A  LF  +E +G+ P+ V FN+L
Sbjct: 411 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 470

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  ++ +     + L +M
Sbjct: 471 INGLCKSGKADIAWKFLEKM 490



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 49/452 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL---------------FEEMI 46
           +A  L  K++A G  P+ +TY+ LI G C  GH   A  L               +  +I
Sbjct: 377 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 436

Query: 47  NG---NGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           N    +G     C           KP+AV + ++I+GLCK G  D A + L +M      
Sbjct: 437 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 496

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  TY+S I   C    S E      EM+ + V+P+ V +++++ +L K       ++ 
Sbjct: 497 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 556

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M+  G  P+   Y T M  +C+ GR+N A+ + + M   G   +  +Y+ L++G+  
Sbjct: 557 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 616

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE-----------------RAF 255
             + + A+S+  +M S    P   TY  L   L  +  VE                   F
Sbjct: 617 IGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVF 676

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            LFD M+++    ++  Y + ++G  ++G   EA  L   ++     L+   Y+ L+   
Sbjct: 677 GLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 736

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA ++F++   K  +PD 
Sbjct: 737 CKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 796

Query: 376 VAFNTLMLGCIRNNETS---KVVELLHRMDER 404
           + +  ++ G I+   +    +++ +L RM+ R
Sbjct: 797 IVWKVIIDGLIKKGHSDISREMIIMLERMNCR 828



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 8/350 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +  ++   G  P V+T + +IN  C+ G    AL + E M + G       CKP+ 
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG-------CKPNV 359

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G C EG V KA  LL +M+   +NPD VTYN +IRG C       A RL   
Sbjct: 360 WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRL 419

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +  T++ +++ LCK+G+ ++A  L + +   G++PNA  +N+L++G C +G+
Sbjct: 420 MEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 479

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP+ V Y  
Sbjct: 480 ADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTI 539

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +        + + EM   G   D   Y T +   C  G + EA  +   +    
Sbjct: 540 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 599

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             +D  +Y+ L+DG    G+   A  +   +     + +  TY I++  L
Sbjct: 600 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 649



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 183/396 (46%), Gaps = 6/396 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +  ++K  G  P+   Y+ +++  CR      A  + +EM     E G+   P  V
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF----EKGLA--PCVV 325

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I+  CKEG +  A  +L  MK +   P+V TYN++++GFC     ++A  L  +M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+ VT+++++   C +G +E A +LL LM   G+  + + YN L++  C  GR 
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  LF S+E+ G K N  +++ LING CK+ + + A     +M+S G  P   TY++ 
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L ++   +       EM +  V   T  Y   I  L K          +  +    C
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+  +   C  GRL  A  +   + +  +  D + YN ++    + G+ D A  
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +   M +    P+   +  L+   +R      V+ L
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPL 661



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 5/343 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + +++  L +      A  L   M +     P   TYN+VIR  C   D   A R    M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +P+  TF+ ++   C+  +++ A  L + M   G   +   Y TL++G C  GR+
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ELF  M+    + ++  Y+ L+ G C  +  E  L +   M   G +P+   Y  +
Sbjct: 240 DEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   + + A ++  EM   G+A         I+  CK G + +AL +   +++  C
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y+ L+ G C  G++  A  L + +    +  D VTYN++I   C DG ++ A  
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   ME  G+  D   +N L+    ++  T +   L   ++ R
Sbjct: 416 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 458



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 160/401 (39%), Gaps = 93/401 (23%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF  L+  G +PN +T+++LINGLC++G   +A    E+M++        C PD  
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTY 500

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------------ 91
            Y++ I+ LCK     +    + +M  K++                              
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560

Query: 92  -----NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                NPDVVTY + +R +C     NEA+ + +EM   GV  + + ++ +MD     G+ 
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620

Query: 147 EEASQLLELMIQIGVRPNAFVY-------------------------------------- 168
           + A  +L+ M  +   PN F Y                                      
Sbjct: 621 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 680

Query: 169 --------------NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
                         +++++GF   GR   A  L   M+      N   Y+ L+  +CK+K
Sbjct: 681 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 740

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
               A  L   M+  G  P +++Y  L  GL    Q ++A ++F   +    + D   ++
Sbjct: 741 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 800

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
             IDGL K G+   + E+   L  + C    ++Y+ L + L
Sbjct: 801 VIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   +   G  P +++Y  L++GL   G T  A  +F  M +   ++     PD 
Sbjct: 743 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 796

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           +++  IIDGL K+G  D ++E+++ ++  N  P   TY
Sbjct: 797 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 199/350 (56%), Gaps = 7/350 (2%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           V +PD V Y T+++G  K G V KA  L  +MKD  I   + ++N V+RG C     + A
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMA 190

Query: 115 KRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
             +F +M   G+  PN++++++++D LCK+ K+++A  L + M+   + P+   Y  L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IK 232
           G     RV  A +LF    + GC   V +Y+ +I+G CK   IE AL+LY +M+ +  +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P + TY+ L  GL   ++ E+A++L++EM   G + D   Y T +DGLCK+G   +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 293 FRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           FR + +   C+ ++ +Y+ LID  CK  RL  A +L   +    L+ D VT+  +I  LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            + ++D+AH+LF  +  K   PD V FNT++ G  +        +L  RM
Sbjct: 429 KESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRM 477



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 196/375 (52%), Gaps = 11/375 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF ++K  G    + +++ ++ GLC  G   +A  +F++M   +G F     P+ +
Sbjct: 155 KALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDM---SGIFS----PNLI 206

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDGLCK   VDKA  L  QM DK I PDVVTY ++I G        EA  LF E 
Sbjct: 207 SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA 266

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGR 180
             +G  P VVT++ ++D LCK G++E A  L + M+ +  ++P+ F Y+ L++G  L+ R
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNR 326

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPTVVTYN 239
             +A EL+  M   GC  +V +Y+ L++G CK+   + A+ ++ +M    +  P V+TY 
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYT 386

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L     ++ ++  A KL  EM+   +  D   + T I  LCK   I EA ELF ++   
Sbjct: 387 VLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-K 445

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            C+ D   ++ ++ G CK  R+  A +L   +        + TY  ++   C  G+   A
Sbjct: 446 TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDA 505

Query: 360 HDLFLDMEAKGVAPD 374
             ++ +M   G  P+
Sbjct: 506 LIMYHEMIEMGFPPE 520



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 164/311 (52%), Gaps = 4/311 (1%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           T N+++  +  A    +A   F   M    +P+ V+++ +M+   K G +++A  L   M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+      +N ++ G C  G+++ A E+F  M  +    N+ SY+I+I+G CK++++
Sbjct: 164 KDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKV 221

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A++L+ +M+ K I P VVTY  L  GL +  +V+ A+ LF+E +  G       Y T 
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 277 IDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           IDGLCK G I  AL L+  + R    + D+ +YS LI+GL  S R + A+EL+  +    
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA-PDCVAFNTLMLGCIRNNETSKV 394
              DVVTYN ++  LC  G  DKA ++F  M    V  P+ + +  L+    + +     
Sbjct: 342 CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDA 401

Query: 395 VELLHRMDERN 405
           V+L   M+ R+
Sbjct: 402 VKLAKEMEGRS 412



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 34/272 (12%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N F  N L+  +    RV  A   F S      + +  SY+ L+NG+ K  +++ AL+L+
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 224 SEMLSKGI---------------------------------KPTVVTYNTLFIGLFEIHQ 250
            EM   GI                                  P +++Y  +  GL +  +
Sbjct: 161 GEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRK 220

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V++A  LF +M    +  D   Y   IDGL K   + EA +LF   R   C   + +Y+ 
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           +IDGLCK GR++ A  L+  + R   L  D+ TY+ +I+ L    + +KA++L+ +M   
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G +PD V +NTL+ G  ++    K +E+  +M
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 2/187 (1%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
           HN F+ + L++ Y K + +E A   +   +    +P  V+YNTL  G F+   V++A  L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F EM+  G+A    ++   + GLC  G I  A E+F+ +  +    ++ SY+ +IDGLCK
Sbjct: 160 FGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCK 217

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           S ++  A  LF  +    +  DVVTY  +I  L    ++ +A+DLF +  AKG  P  V 
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 378 FNTLMLG 384
           +NT++ G
Sbjct: 278 YNTMIDG 284


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 205/391 (52%), Gaps = 14/391 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN ++++ +I  LCR G+   A+ +F  M + N      C  D   Y+T++ GLC EG 
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRN------CVADGYTYSTLMHGLCNEGR 225

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A  LL +M+ +   P+ V +N +I   C   D + A +L   M  +G  PN VT++ 
Sbjct: 226 IDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC  GK+++A  LL  M+     PN   + TL+DGF   GR      + VS+E  G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + N FSYS LI+G  K  + E  + L+ EM+ KG KP  + Y+ L  GL    + + A 
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +   EM+  G   +++ Y + + G  + G I +A+ +++ +    C      YS LI+GL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465

Query: 316 CKSGRLK---IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM--EAKG 370
           CK+G+LK   I W+    L RG+ + DVV Y+ MIH  C    +++   LF  M      
Sbjct: 466 CKNGKLKEALIVWK--QMLSRGIKL-DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK 522

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + PD V +N L+      N  S+ +++L+ M
Sbjct: 523 LQPDVVTYNILLNAFCTKNSVSRAIDILNTM 553



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 163/305 (53%), Gaps = 8/305 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A+ L   +   GC PN +TY++L++GLC  G    A++L   M+         C P+ +
Sbjct: 263 RASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK------CVPNDI 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++DG  K G       +L+ +++K    +  +Y+S+I G           +L+ EM
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +PN + +S ++D LC+ GK +EA + L  M   G  PN+F Y++LM G+   G +
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  ++  M    C H+   YSILING CKN +++ AL ++ +MLS+GIK  VV Y+++
Sbjct: 437 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 496

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
             G      VE+  KLF++M  H   +  D   Y   ++  C    +  A+++  T+   
Sbjct: 497 IHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQ 556

Query: 300 KCELD 304
            C+ D
Sbjct: 557 GCDPD 561



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 194/403 (48%), Gaps = 44/403 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN----INP 93
           AL+LF  M     EF   CK     + T+++ + +EG  D A E    + D N    I P
Sbjct: 119 ALDLFHRM---GAEFH--CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQP 173

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + +++N VI+  C   + ++A  +F  M D+    +  T+S +M  LC  G+++EA  LL
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLL 233

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G  PN   +N L+   C  G ++RA +L  +M   GC  N  +Y+ L++G C  
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLK 293

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A+SL + M++    P  +T+ TL  G  +  +     ++   ++  G   + ++Y
Sbjct: 294 GKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSY 353

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA--------- 324
            + I GL K G     ++L++ +    C+ +   YS LIDGLC+ G+   A         
Sbjct: 354 SSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKN 413

Query: 325 --------------WELFHS--LPRGVLIADVVT----------YNIMIHALCADGKMDK 358
                         W  F +  + + +L+   +T          Y+I+I+ LC +GK+ +
Sbjct: 414 KGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKE 473

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  ++  M ++G+  D VA+++++ G        + ++L ++M
Sbjct: 474 ALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 516



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 139/239 (58%), Gaps = 8/239 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++   +   L+  G   N  +YS+LI+GL + G     + L++EM+         CKP+ 
Sbjct: 332 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNT 385

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y+ +IDGLC+EG  D+AKE L++MK+K   P+  TY+S++ G+  A D ++A  ++ E
Sbjct: 386 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 445

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D     + V +S++++ LCKNGK++EA  + + M+  G++ +   Y++++ GFC    
Sbjct: 446 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 505

Query: 181 VNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           V +  +LF  M   +   + +V +Y+IL+N +C    +  A+ + + ML +G  P  +T
Sbjct: 506 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 29/206 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++    C  + + YS LINGLC+ G    AL ++++M++     G+  K D V
Sbjct: 438 KAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSR----GI--KLDVV 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y+++I G C    V++  +L  QM   +  + PDVVTYN ++  FC  N  + A  +  
Sbjct: 492 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 551

Query: 120 EMMDQGVQPNVVTFSV-----------------IMDELC----KNGKMEEASQLLELMIQ 158
            M+DQG  P+ +T  +                  +DEL     K  +   AS ++E+M+Q
Sbjct: 552 TMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQ 611

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRA 184
             + P    +   +   C   +V + 
Sbjct: 612 KFLLPKPSTWALAVQQLCKPMKVRKT 637



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 96/206 (46%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N  S++++I   C+   ++ A+ ++  M  +       TY+TL  GL    +++ A  L 
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLL 233

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           DEMQ  G   +  A+   I  LCK G +  A +L   + +  C  +  +Y+ L+ GLC  
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLK 293

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G+L  A  L + +     + + +T+  ++      G+      + + +E KG   +  ++
Sbjct: 294 GKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSY 353

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           ++L+ G  +  +    ++L   M E+
Sbjct: 354 SSLISGLFKEGKGEHGMQLWKEMVEK 379


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 187/375 (49%), Gaps = 6/375 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L   G  PN  TY  ++  LC  G    A+ +    +         C PD V  T +ID 
Sbjct: 172 LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK------CYPDVVTCTVLIDA 225

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            CKE  V +A +L  +M++K   PDVVTYN +I+GFC     +EA R   ++   G QP+
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           V++ ++I+  LC  G+  +A +LL  M++ G  P+   +N L++  C  G + +A  +  
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLE 345

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   N  S++ LI G+C  K I+ A+     M+S+G  P +VTYN L   L +  
Sbjct: 346 MMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDG 405

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V+ A  +  ++   G +    +Y T IDGL K G    A+EL   +     + D+ + +
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 465

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            ++ GL + G+++ A + FH L R  +  +   YN +I  LC   +   A D   DM AK
Sbjct: 466 SVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK 525

Query: 370 GVAPDCVAFNTLMLG 384
           G  P    + TL+ G
Sbjct: 526 GCKPTEATYTTLIKG 540



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 202/399 (50%), Gaps = 9/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ +   L+  G   +V +Y+ LI+G C++G    AL + + M       GV   P+A  
Sbjct: 133 ASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-------GV--SPNAAT 183

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++  LC  G + +A ++L +       PDVVT   +I   C  +   +A +LF EM 
Sbjct: 184 YDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMR 243

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+VVT++V++   CK G+++EA + L+ +   G +P+   +N ++   C  GR  
Sbjct: 244 NKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWM 303

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L  +M   GC  +V +++ILIN  C+   +  AL++   M   G  P   ++N L 
Sbjct: 304 DAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G      ++RA +  + M   G   D   Y   +  LCK+G + +A+ +   L    C 
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + SY+ +IDGL K G+ ++A EL   +    L  D++T   ++  L  +GK+ +A   
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  ++   + P+   +N+++ G  ++ +TS  ++ L  M
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 174/344 (50%), Gaps = 3/344 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD +  T +I   CK G    A +++  +++     DV +YN +I G+C + +  EA R+
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV 171

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   GV PN  T+  ++  LC  GK+++A Q+L   +Q    P+      L+D  C 
Sbjct: 172 LDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              V +A +LF  M + GCK +V +Y++LI G+CK   ++ A+    ++ S G +P V++
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N +   L    +   A KL   M R G       +   I+ LC+ G + +AL +   + 
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 + RS++ LI G C    +  A E    +       D+VTYNI++ ALC DGK+D
Sbjct: 349 KHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVD 408

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            A  +   + +KG +P  +++NT++ G ++  +    VELL  M
Sbjct: 409 DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 184/363 (50%), Gaps = 42/363 (11%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V+T + LI+  C+      A+ LF EM N        CKPD V Y  +I G CK G
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG------CKPDVVTYNVLIKGFCKGG 265

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+A   L ++      PDV+++N ++R  C      +A +L   M+ +G  P+VVTF+
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++++ LC+ G + +A  +LE+M + G  PN+  +N L+ GFC    ++RA E    M S 
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+IL+   CK+ +++ A+ + S++ SKG  P++++YNT+  GL ++ + E A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 255 FKLFDEM-----------------------------------QRHGVAADTWAYRTFIDG 279
            +L +EM                                   +R  +  + + Y + I G
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIA 338
           LCK+     A++    +    C+    +Y+ LI G+   G  + A +L + L  RG++  
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565

Query: 339 DVV 341
            +V
Sbjct: 566 SLV 568



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 142/266 (53%), Gaps = 6/266 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   +   GC P+V+T++ LIN LC+ G    ALN+  EM+  +G       P++
Sbjct: 303 MDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL-EMMPKHGH-----TPNS 356

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  +I G C    +D+A E L  M  +   PD+VTYN ++   C     ++A  +  +
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P++++++ ++D L K GK E A +LLE M   G++P+     +++ G    G+
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A + F  ++    + N F Y+ +I G CK+++   A+   ++M++KG KPT  TY T
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           L  G+      E A KL +E+   G+
Sbjct: 537 LIKGITYEGLAEDASKLSNELYSRGL 562


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 208/404 (51%), Gaps = 16/404 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +K     P++ TY+ LING+C  G     L L + M +      +  +PD V
Sbjct: 293 EAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKS------LKLQPDVV 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG  + G   +AK+L+ QM++  + P+ VT+N  ++  C      E  R   E+
Sbjct: 347 TYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL 406

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++  G  P++VT+  ++    K G +  A +++  M Q G++ N    NT++D  C   +
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L  S    G   +  +Y  LI GY + +++E A  ++ EM    I PTV T+N+
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    + E A + FDE+   G+  D   + + I G CK G + +A E +     +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN--ESIK 584

Query: 301 CELDIRSYSC--LIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKM 356
                 +Y+C  L++GLCK G  + A   F++L   R V   D VTYN MI A C D K+
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV---DTVTYNTMISAFCKDKKL 641

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +A+DL  +ME K + PD   +N+++   + + + S+  ELL +
Sbjct: 642 KEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 209/400 (52%), Gaps = 8/400 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   +K  G  PN +TY+ L+ G C+ G    A  + E M   N        PD   Y  
Sbjct: 262 LLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN------ILPDLCTYNI 315

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+G+C  G + +  EL+  MK   + PDVVTYN++I G      S EAK+L  +M + G
Sbjct: 316 LINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDG 375

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRA 184
           V+PN VT ++ +  LCK  K EE ++ ++ ++++ G  P+   Y+TL+  +   G ++ A
Sbjct: 376 VKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGA 435

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E+   M   G K N  + + +++  CK ++++ A +L      +G     VTY TL +G
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMG 495

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F   +VE+AF+++DEM+R  +      + + I GLC +G    A+E F  L       D
Sbjct: 496 YFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +++ +I G CK GR++ A+E ++   +     D  T NI+++ LC +G  +KA + F 
Sbjct: 556 DCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  +    D V +NT++    ++ +  +  +LL  M+E+
Sbjct: 616 TLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 200/372 (53%), Gaps = 14/372 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L   +K+   +P+V+TY+TLI+G    G ++ A  L E+M N     GV  KP+ V
Sbjct: 328 EGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEND----GV--KPNQV 381

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKD----KNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            +   +  LCKE   +K +E+  ++K+       +PD+VTY+++I+ +    D + A  +
Sbjct: 382 THNISLKWLCKE---EKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +G++ N +T + I+D LCK  K++EA  LL+   + G   +   Y TL+ G+  
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFR 498

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +V +A E++  M+ +     V +++ LI G C + + E A+  + E+   G+ P   T
Sbjct: 499 EEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCT 558

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N++ +G  +  +VE+AF+ ++E  +H    D +     ++GLCK G   +AL  F TL 
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL- 617

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           I + E+D  +Y+ +I   CK  +LK A++L   +    L  D  TYN +I +L  DGK+ 
Sbjct: 618 ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677

Query: 358 KAHDLFLDMEAK 369
           +A +L      K
Sbjct: 678 EADELLKKFSGK 689



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 207/406 (50%), Gaps = 11/406 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV---ALNLFEEMINGNGEFGVVCKPD 59
           A  +F K+     +PN++T +TL+ GL R   +     A  +F++M+    + GV    D
Sbjct: 150 ALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMV----KIGVSL--D 203

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              +  +++G C EG ++ A  +L +M  + N+NPD VTYN++++        ++ K L 
Sbjct: 204 VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           ++M   G+ PN VT++ ++   CK G ++EA Q++ELM Q  + P+   YN L++G C  
Sbjct: 264 LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNA 323

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +    EL   M+S+  + +V +Y+ LI+G  +      A  L  +M + G+KP  VT+
Sbjct: 324 GSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTH 383

Query: 239 NTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           N     L +  + E   +   E+ + HG + D   Y T I    K G +  ALE+ R + 
Sbjct: 384 NISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +++  + + ++D LCK  ++  A  L  S  +   I D VTY  +I     + K++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVE 503

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           KA +++ +M+   + P    FN+L+ G   + +T   +E    + E
Sbjct: 504 KAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE 549



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 173/383 (45%), Gaps = 30/383 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  +++  G +PN +T++  +  LC+           +E++  +G       PD 
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHG-----FSPDI 416

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I    K G +  A E++ +M  K I  + +T N+++   C     +EA  L   
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDS 476

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              +G   + VT+  ++    +  K+E+A ++ + M +I + P    +N+L+ G C  G+
Sbjct: 477 AHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGK 536

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A E F  +   G   +  +++ +I GYCK   +E A   Y+E +    KP   T N 
Sbjct: 537 TELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +    E+A   F+ +       DT  Y T I   CK+  + EA +L   +   +
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKR 655

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWEL-------FHSLPRGV----------------LI 337
            E D  +Y+ +I  L + G+L  A EL       F S+ R +                L 
Sbjct: 656 LEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELK 715

Query: 338 ADVVTYNIMIHALCADGKMDKAH 360
            + + Y+ +I+ LC+ G++ K H
Sbjct: 716 TEAIAYSDVINELCSRGRL-KEH 737



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 171/384 (44%), Gaps = 40/384 (10%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS---NEA 114
           P   ++   +      G    A ++  +M    + P+++T N+++ G      S     A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMD 173
           + +F +M+  GV  +V TF+V+++  C  GK+E+A  +LE M+ +  V P+   YNT++ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA-------------- 219
                GR++  K+L + M+  G   N  +Y+ L+ GYCK   ++ A              
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 220 ---------------------LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
                                L L   M S  ++P VVTYNTL  G FE+     A KL 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCK 317
           ++M+  GV  +   +   +  LCK     E     + L  +     DI +Y  LI    K
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G L  A E+   + +  +  + +T N ++ ALC + K+D+AH+L      +G   D V 
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           + TL++G  R  +  K  E+   M
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEM 512



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 39/207 (18%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ---VERAFKLFD 259
           + I ++ Y    +   AL ++ +M+   +KP ++T NTL IGL        +  A ++FD
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M + GV+                                   LD+++++ L++G C  G
Sbjct: 194 DMVKIGVS-----------------------------------LDVKTFNVLVNGYCLEG 218

Query: 320 RLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           +L+ A  +   +     +  D VTYN ++ A+   G++    DL LDM+  G+ P+ V +
Sbjct: 219 KLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTY 278

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           N L+ G  +     +  +++  M + N
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTN 305


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 207/388 (53%), Gaps = 10/388 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V TY+ +I+G C++G    AL + + ++  NG     C PD   Y  +I GLC E
Sbjct: 225 GVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNG-----CNPDDWTYNILIYGLCGE 278

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
              D+A+ELL     +   P V+T+ ++I G+C A   ++A R+   M+    + ++  +
Sbjct: 279 K-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            V+++ L K  + +EA + +  M   G+ PN  +Y +++DG+C  G+V  A E+F  ME 
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC+ N ++YS LI G  +++++  A++L ++M   GI P V+TY TL  G  + H+ + 
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           AF+LF+ M+++G+  D  AY      LCK+G   EA        ++  ++   +Y+ L+D
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKV---TYTSLVD 514

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G  K+G    A  L   +      AD  TY++++ ALC   K+++A  +   M   GV  
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + VA+  ++   I+  +      + + M
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEM 602



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 213/454 (46%), Gaps = 62/454 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    +++ A G  PNV+ Y+++I+G C+ G    AL +F  M +        C+P+A 
Sbjct: 352 EAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG------CRPNAW 405

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GL ++  + KA  L+ +M++  I P V+TY ++I+G C  ++ + A RLF EM
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EM 464

Query: 122 MDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+Q G+ P+   ++V+   LCK+G+ EEA   L   ++ GV      Y +L+DGF   G 
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGN 521

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS------------------- 221
            + A  L   M + GCK + ++YS+L+   CK K++  ALS                   
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 222 ----------------LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                           +++EM+S G KP+  TY        +I Q+E A  L  EM+R G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK-------- 317
           VA D   Y  FI+G    GY+  A    + +    CE +  +Y  L+    K        
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHY 701

Query: 318 ---SG-----RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
              SG      L   W+L   + +  L    VTY+ +I   C   ++++A  LF  M  K
Sbjct: 702 VDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGK 761

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            ++P+   +  L+  C       K V  +  M E
Sbjct: 762 DISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIE 795



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 1/345 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+ +   YT +I GLC+   V +A  LL+ M     + ++ TY  +I+G C     + A+
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGAR 215

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           R+  EM  +GV P+V T++ ++D  CK+G+M++A  +  LM + G  P+ + YN L+ G 
Sbjct: 216 RVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL 275

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   + + A+EL       G    V +++ +INGYCK + I+ AL + + MLS   K  +
Sbjct: 276 C-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             Y  L   L +  + + A +   EM  +G+A +   Y + IDG CK G +  ALE+FR 
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  +  +YS LI GL +  +L  A  L   +    +   V+TY  +I   C   +
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            D A  LF  ME  G+ PD  A+N L     ++    +    L R
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR 499



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 192/413 (46%), Gaps = 25/413 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL TK++  G  P VITY+TLI G C+      A  LF EM+  NG       PD  
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EMMEQNG-----LTPDEQ 475

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +   LCK G  ++A   L++   K +    VTY S++ GF  A +++ A  L  +M
Sbjct: 476 AYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 532

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G + +  T+SV++  LCK  K+ EA  +L+ M   GV+ N   Y  ++      G+ 
Sbjct: 533 VNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKH 592

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F  M S G K +  +Y++ I+ YCK  +IE A  L  EM   G+ P VVTYN  
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK----NGYIVEALELFRTL- 296
             G   +  ++RAF     M       + W Y   +    K    + + V+   ++  + 
Sbjct: 653 INGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIE 712

Query: 297 ---------RILKCELDIR--SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
                    R++K  L+    +YS +I G CK+ RL+ A  LF  +    +  +   Y +
Sbjct: 713 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTM 772

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +I   C      KA     DM   G  P   +++ L++G     +  K   L 
Sbjct: 773 LIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLF 825



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 157/331 (47%), Gaps = 23/331 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  ++   G + N++ Y+ +I+ + + G    A ++F EMI+         KP A 
Sbjct: 559 EALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH------KPSAT 612

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  I   CK G +++A+ L+ +M+   + PDVVTYN  I G  +    + A      M
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRM 672

Query: 122 MDQGVQPNVVTFSVIMDELCKNG----------------KMEEASQLLELMIQIGVRPNA 165
           +D   +PN  T+ +++    K                  +++   QLLE M++ G+ P A
Sbjct: 673 IDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTA 732

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++++ GFC   R+  A  LF  M       N   Y++LI   C  K    A+S  ++
Sbjct: 733 VTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTD 792

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNG 284
           M+  G +P + +Y+ L +GL +    ++A  LF D +       +  A++   DGL K G
Sbjct: 793 MIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAG 852

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++    +L   +    C++D  +YS + D +
Sbjct: 853 HVDFCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 138/294 (46%), Gaps = 34/294 (11%)

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           G + +A  LL +M  +G R N + Y  L+ G C T  V  A  L V M   GC  N+ +Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           ++LI G CK   I GA  +  EM  +G+ P+V TYN +  G  +  +++ A  +   M+R
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 264 HGVAADTWAYRTFIDGLCK-----------------------------NGY-----IVEA 289
           +G   D W Y   I GLC                              NGY     I +A
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           L +  ++    C+LD+++Y  LI+ L K  R K A E    +    L  +VV Y  +I  
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            C  GK+  A ++F  ME +G  P+   +++L+ G I++ +  K + L+ +M E
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 58/379 (15%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +TY++L++G  + G+T  A  L E+M+N        CK D+  Y+ ++  LCK+  +++A
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEG------CKADSYTYSVLLQALCKQKKLNEA 560

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             +L QM    +  ++V Y  +I         + AK +F EM+  G +P+  T++V +  
Sbjct: 561 LSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK G++EEA  L+  M + GV P+   YN  ++G    G ++RA      M    C+ N
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680

Query: 200 VFSYSILINGYCKNK----------------EIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
            ++Y IL+  + K                  E++    L   M+  G+ PT VTY+++  
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIA 740

Query: 244 GLFEIHQVERAFKLFDEMQ-----------------------------------RHGVAA 268
           G  +  ++E A  LFD M+                                     G   
Sbjct: 741 GFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP 800

Query: 269 DTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
              +Y   I GLC  G   +A  LF   L +     +  ++  L DGL K+G +    +L
Sbjct: 801 HLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQL 860

Query: 328 FHSLPRGVLIADVVTYNIM 346
             ++       D  TY+++
Sbjct: 861 LSAMENRHCQIDSETYSMV 879



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 23/263 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  P+V+TY+  ING    G+   A +  + MI+ +      C+P+  
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDAS------CEPNYW 682

Query: 62  IYTTIIDGLCKEGFVDK----------------AKELLLQMKDKNINPDVVTYNSVIRGF 105
            Y  ++    K   VD                   +LL +M    +NP  VTY+S+I GF
Sbjct: 683 TYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGF 742

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C A    EA  LF  M  + + PN   +++++   C      +A   +  MI+ G +P+ 
Sbjct: 743 CKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHL 802

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             Y+ L+ G C  G  ++AK LF  +  M    HN  ++ IL +G  K   ++    L S
Sbjct: 803 ESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLS 862

Query: 225 EMLSKGIKPTVVTYNTLFIGLFE 247
            M ++  +    TY+ +   + E
Sbjct: 863 AMENRHCQIDSETYSMVTDNIHE 885


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 204/382 (53%), Gaps = 16/382 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +K  G  PN+ TYS +I+G C+TG+   A  L++E++           P+ V
Sbjct: 286 EAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE------LLPNVV 339

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ T++DG CK   +  A+ L + M    ++P++  YN +I G C + +  EA  L  EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V T++++++ LC   ++ EA++L + M    + P++  YN+L+ GFC    +
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A +L   M S G + N+ ++S LI+GYCK + I+ A+ LY EM  KGI P VVTY TL
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-------- 293
               F+   ++ A +L+ +M   G+  +   +   +DG  K G + +A++ +        
Sbjct: 520 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 294 -RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            +++    C   +  ++CLI+GLC++G +  A   F  +  G +  D+ +Y  M+ A   
Sbjct: 580 GKSIVQRSCWKYV-GFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLR 638

Query: 353 DGKMDKAHDLFLDMEAKGVAPD 374
           + ++     L  DM   G+ P+
Sbjct: 639 EKRITDTMMLHCDMIKTGILPN 660



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 206/402 (51%), Gaps = 15/402 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++ + G +PNV  Y+  I  LCR      A  +FE M       GVV  P+   Y+ 
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELM----KIHGVV--PNLYTYSA 308

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG CK G + +A  L  ++    + P+VV + +++ GFC A +   A+ LF+ M+  G
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFG 368

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN+  ++ ++   CK+G M EA  LL  M  + + P+ F Y  L++G C   R+  A 
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  M++     +  +Y+ LI+G+CK   IE AL L SEM S G++P ++T++TL  G 
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++  ++ A  L+ EM   G+  D   Y T ID   K   + EAL L+  +       + 
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548

Query: 306 RSYSCLIDGLCKSGRLKIAWELF---HSLPRGVLIAD-----VVTYNIMIHALCADGKMD 357
            +++CL+DG  K GRL  A + +   +    G  I        V +  +I  LC +G + 
Sbjct: 549 HTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +A   F DM++ GV PD  ++ +++   +R    +  + +LH
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTM-MLH 649



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 190/383 (49%), Gaps = 6/383 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+      ++NGL R          ++ MI+     G+V  PD  IY+ +     K+G
Sbjct: 194 CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYSVLFQCCFKQG 247

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           F  K ++LL +M    + P+V  Y   IR  C  N   EA+++F  M   GV PN+ T+S
Sbjct: 248 FPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYS 307

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D  CK G + +A  L + ++   + PN  V+ TL+DGFC    +  A+ LFV M   
Sbjct: 308 AMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKF 367

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   N++ Y+ LI+G CK+  +  A+ L SEM S  + P V TY  L  GL    ++  A
Sbjct: 368 GVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEA 427

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +LF  M+   +   +  Y + I G CK   I +AL+L   +     E +I ++S LIDG
Sbjct: 428 NRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDG 487

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK   +K A  L+  +    ++ DVVTY  +I A   +  M +A  L+ DM   G+ P+
Sbjct: 488 YCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPN 547

Query: 375 CVAFNTLMLGCIRNNETSKVVEL 397
              F  L+ G  +    S  ++ 
Sbjct: 548 DHTFACLVDGFWKEGRLSDAIDF 570



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 16/307 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L +++++    P+V TY+ LINGLC       A  LF+ M N          P +
Sbjct: 390 LEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNER------IFPSS 443

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++I G CKE  ++KA +L  +M    + P+++T++++I G+C   +   A  L+ E
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFE 503

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P+VVT++ ++D   K   M+EA +L   M++ G+ PN   +  L+DGF   GR
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563

Query: 181 VNRAKELFV---------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ A + ++         S+    C   V  ++ LI G C+N  I  A   +S+M S G+
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYV-GFTCLIEGLCQNGYILRASRFFSDMKSGGV 622

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P + +Y ++        ++     L  +M + G+  +    +       +NGY+  A  
Sbjct: 623 TPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACF 682

Query: 292 LFRTLRI 298
           L  + R+
Sbjct: 683 LTNSSRL 689



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 35/281 (12%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P+V  +SV+     K G   +  +LL+ M  +GV+PN ++Y   +   C   +
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+++F  M+  G   N+++YS +I+GYCK   +  A  LY E+L   + P VV + T
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L                                   +DG CK   +V A  LF  +    
Sbjct: 344 L-----------------------------------VDGFCKARELVAARSLFVHMVKFG 368

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++  Y+CLI G CKSG +  A  L   +    L  DV TY I+I+ LC + ++ +A+
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF  M+ + + P  V +N+L+ G  +     K ++L   M
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEM 469



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 1/219 (0%)

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           L+VS E M C  +  +   ++NG  + +  +     Y  M+S+G+ P V  Y+ LF   F
Sbjct: 186 LWVSRE-MRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCF 244

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +     +  KL DEM   GV  + + Y  +I  LC+   + EA ++F  ++I     ++ 
Sbjct: 245 KQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLY 304

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +YS +IDG CK+G L+ A+ L+  +    L+ +VV +  ++   C   ++  A  LF+ M
Sbjct: 305 TYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHM 364

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              GV P+   +N L+ G  ++    + + LL  M+  N
Sbjct: 365 VKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   L+ FG  PNV+ Y+TLI+G C+ G+ ++A NLF +M       G+V  P+   Y+ 
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM----DRLGLV--PNPHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++G  K+G   +  ++   MK   I P+   YN +I  +C     ++A ++F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +   V+T+++++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC  G+++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I P+ VTY  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             ++  E+A ++   M++ G+  D + Y   I GLC +G + EA +LF++L  +  + + 
Sbjct: 414 ARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I G CK G    A  L + +    ++ +V ++   I  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 534 MINSGLKPS 542



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 190/378 (50%), Gaps = 7/378 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           ++  +I G C  G+ +    L   +     EFG+   P+ VIYTT+IDG CK G V  AK
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAML----EEFGL--SPNVVIYTTLIDGCCKYGNVMLAK 213

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L  +M    + P+  TY+ ++ GF       E  +++  M   G+ PN   ++ ++ E 
Sbjct: 214 NLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G +++A ++   M + G+      YN L+ G C   +   A +L   +  +G   N+
Sbjct: 274 CNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILING+C   +++ A+ L++++ S G+ PT+VTYNTL  G  ++  +  A  L  E
Sbjct: 334 VTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+   +A     Y   ID   +  Y  +A E+   +       D+ +YS LI GLC  G 
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGN 453

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +K A +LF SL    L  + V YN MIH  C +G   +A  L  +M   G+ P+  +F +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 381 LMLGCIRNNETSKVVELL 398
             +G +  +E  K  ELL
Sbjct: 514 -TIGLLCRDEKWKEAELL 530



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 182/343 (53%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           DA  +  +I G C+ G+  K   LL  +++  ++P+VV Y ++I G C   +   AK LF
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLF 216

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+ PN  T+SV+M+   K G   E  Q+ E M + G+ PNA+ YN L+  +C  
Sbjct: 217 CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNG 276

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G V++A ++F  M   G    V +Y+ILI G C+ K+   A+ L  ++   G+ P +VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  G  ++ +++ A +LF++++  G++     Y T I G  K   +  AL+L + +  
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ LID   +    + A E+   + +  L+ DV TY+++IH LC  G M +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKE 456

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF  +    + P+ V +NT++ G  +   + + + LL+ M
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 191/414 (46%), Gaps = 12/414 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF      G +    + S ++N L  +G    A +L   +I+G     ++      
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQA 80

Query: 56  ----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
               C     +Y TI++        D+A   L  M  +   P   T+N+++     +N  
Sbjct: 81  HFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYF 140

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  +F E+  + V  +  +F +++   C+ G   +  +LL ++ + G+ PN  +Y TL
Sbjct: 141 DKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G V  AK LF  M+ +G   N  +YS+L+NG+ K         +Y  M   GI
Sbjct: 200 IDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGI 259

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P    YN L         V++AFK+F EM+  G+A     Y   I GLC+     EA++
Sbjct: 260 VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +  +    +I +Y+ LI+G C  G++  A  LF+ L    L   +VTYN +I    
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               +  A DL  +ME + +AP  V +  L+    R N T K  E +H + E++
Sbjct: 380 KVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACE-MHSLMEKS 432



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 6/273 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G    V+TY+ LI GLCR      A+ L  + +N  G       P+ V
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK-VNKVG-----LSPNIV 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C  G +D A  L  Q+K   ++P +VTYN++I G+    +   A  L  EM
Sbjct: 335 TYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ VT+++++D   +    E+A ++  LM + G+ P+ + Y+ L+ G C+ G +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNM 454

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF S+  M  + N   Y+ +I+GYCK      AL L +EM+  G+ P V ++ + 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCST 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
              L    + + A  L  +M   G+      Y+
Sbjct: 515 IGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 6/204 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +LK+ G  P ++TY+TLI G  +  +   AL+L +EM            P  V 
Sbjct: 352 AVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER------CIAPSKVT 405

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +ID   +  + +KA E+   M+   + PDV TY+ +I G C   +  EA +LF  + 
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  +QPN V ++ ++   CK G    A +LL  M+  G+ PN   + + +   C   +  
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWK 525

Query: 183 RAKELFVSMESMGCKHNVFSYSIL 206
            A+ L   M + G K +V  Y ++
Sbjct: 526 EAELLLGQMINSGLKPSVSLYKMV 549


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV++Y+T+I+G  +      A  LF EM++          PD V   +IIDGLCK  
Sbjct: 117 CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRG------IPPDVVTCNSIIDGLCKVQ 170

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +DKA+E+L QM DK+I PD  TYNS++ G+  +    EA R+  +M   G  PN VT+S
Sbjct: 171 AMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYS 230

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++D LCK G   EA ++L  MIQ    PN   Y  L+ G+   G +     L   M   
Sbjct: 231 MLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQN 290

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G + +   ++I I  Y K   ++ A+  +++M  +G+ P +++Y T+  GL +I +++ A
Sbjct: 291 GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
              F +M   G++ D   +   I G    G   +A ELF  +        +  ++ +ID 
Sbjct: 351 MSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDK 410

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           L K G++  A  LF  +P   +  +VV+YN +IH     GK+D+   L  DM + G+ P+
Sbjct: 411 LFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPN 470

Query: 375 CVAFNTLM 382
            V FNTL+
Sbjct: 471 AVTFNTLL 478



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 198/389 (50%), Gaps = 4/389 (1%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
            GC P+V +Y+ L+ GLC       A++L   M     E G  C P+ V YTT+I G  K
Sbjct: 78  LGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMM----AEDGDHCPPNVVSYTTVIHGFFK 133

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           E  V KA  L  +M D+ I PDVVT NS+I G C     ++A+ +  +M D+ + P+  T
Sbjct: 134 EDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTT 193

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++     +G+++EA ++L+ M + G  PN   Y+ L+D  C  G    A+E+  SM 
Sbjct: 194 YNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMI 253

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                 NV +Y  L++GY    ++    +L   M+  G++P    +N       +  +++
Sbjct: 254 QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A   F++M++ G+  D  +Y T IDGLCK G +  A+  F  +       DI  ++ LI
Sbjct: 314 EAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLI 373

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G    G+ + A ELF+ +    +   VV +  MI  L  +GK+ +A  LF  M    V 
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVK 433

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           P+ V++N ++ G     +  +V++LL  M
Sbjct: 434 PNVVSYNAIIHGYFLAGKLDEVLKLLDDM 462



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A   ++   G   N I+++ ++  LC    T  A+N+   +I    + G  C PD   
Sbjct: 32  AFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI---VIRWTPKLG--CTPDVFS 86

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           YT ++ GLC E   ++A +L+  M +   +  P+VV+Y +VI GF   ++  +A  LF E
Sbjct: 87  YTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCE 146

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G+ P+VVT + I+D LCK   M++A ++L  M    + P+   YN+L+ G+  +G+
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +   M   G   N  +YS+LI+  CK      A  + + M+     P V TY  
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G      +     L D M ++GV  D   +   I    K G + EA+  F  +R   
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI SY  +IDGLCK GRL  A   F  +    L  D+V +  +IH     GK +KA 
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +LF +M  +G+ P  V F T++    +  + ++   L   M
Sbjct: 387 ELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLM 427



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 171/385 (44%), Gaps = 38/385 (9%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V YT +I   C  G ++ A   L Q+    +  + +++  ++R  C    +++A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDG 174
            I    + G  P+V +++V++  LC   K EEA  L+ +M + G    PN   Y T++ G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F     V +A  LF  M   G   +V + + +I+G CK + ++ A  +  +M  K I P 
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TYN+L  G     Q++ A ++  +M RHG   +   Y   ID LCK G   EA E+  
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 295 TLRILKCELDIRSYSCLIDGLC-----------------------------------KSG 319
           ++   +   ++ +Y  L+ G                                     K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           RL  A   F+ + +  L+ D+++Y  MI  LC  G++D A   F  M   G++PD V F 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
            L+ G     +  K  EL + M +R
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDR 395



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 3/181 (1%)

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SK + PT VTY  L      +  +  AF    ++ + G+ A+  ++   +  LC      
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 288 EALEL-FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG--VLIADVVTYN 344
           +A+ +  R    L C  D+ SY+ L+ GLC   + + A +L H +         +VV+Y 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +IH    + ++ KA+ LF +M  +G+ PD V  N+++ G  +     K  E+L +M ++
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 405 N 405
           +
Sbjct: 186 H 186


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 214/431 (49%), Gaps = 39/431 (9%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
            A++  ++  G EPNV TY+ L+  LC+ G    A  L  EM          C PD V Y
Sbjct: 165 GAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRG------CVPDGVSY 218

Query: 64  TTIIDGLCKEGFVDKAKE--------------------------------LLLQMKDKNI 91
           TT++  +C++G V++A+E                                L+ +M    +
Sbjct: 219 TTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGV 278

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P+VV+Y+SVI       +   A  +  +M+ +G +PNV TFS +M      G++ E   
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVG 338

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-MGCKHNVFSYSILINGY 210
           L  +M+  GVRPN  VYNTL++G C +G +  A ++   ME    C+ NV +YS L++G+
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF 398

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K  +++GA  ++++M++ G++P VV Y ++   L +    ++A++L D M   G     
Sbjct: 399 VKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             + TFI GLC  G ++ A+ +   ++   C  D R+Y+ L+DGL     LK A EL   
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L    +  ++VTYN +++   + GK +    +   M   GV PD +  N ++    +  +
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGK 578

Query: 391 TSKVVELLHRM 401
               ++ L R+
Sbjct: 579 VRTAIQFLDRI 589



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLC-RTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            A  +F ++K FGC+P V  Y+ L++ L   +G+    +    E + G G      +P+ 
Sbjct: 126 RALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEG-----MEPNV 180

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LCK G +D A +LL++M  +   PD V+Y +V+   C      EA+ +   
Sbjct: 181 FTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARR 240

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              +GV   V   + ++  LC+ G++ E   L++ M+  GV PN   Y++++      G 
Sbjct: 241 FGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGE 297

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A  +   M   GC+ NV ++S L+ GY     +   + L+  M+ +G++P VV YNT
Sbjct: 298 VELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNT 357

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           L  GL     +  A  +   M++      +   Y T + G  K G +  A E++  +   
Sbjct: 358 LLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNC 417

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  Y+ ++D LCK+     A+ L  ++        VVT+N  I  LC  G++  A
Sbjct: 418 GVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWA 477

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +   M+  G  PD   +N L+ G    NE  +  EL+  ++ER
Sbjct: 478 MRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEER 522



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 186/385 (48%), Gaps = 8/385 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++   G +PNV++YS++I+ L   G   +AL +  +MI         C+P+  
Sbjct: 265 EVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRG------CRPNVH 318

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +++++ G    G V +   L   M  + + P+VV YN+++ G C + +  EA  +   M
Sbjct: 319 TFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM 378

Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D   +PNV T+S ++    K G ++ AS++   M+  GVRPN  VY +++D  C    
Sbjct: 379 EKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSM 438

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A  L  +M + GC   V +++  I G C    +  A+ +  +M   G  P   TYN 
Sbjct: 439 FDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF +++++ A +L  E++   V  +   Y T + G   +G     L++   + +  
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKA 359
            + D  + + +I    K G+++ A +    +  G  L  D++ +  ++  +C    +++A
Sbjct: 559 VKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEA 618

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLG 384
                 M  KG+ P+   ++ L+ G
Sbjct: 619 IVYLNKMLNKGIFPNIATWDVLVRG 643



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 194/421 (46%), Gaps = 55/421 (13%)

Query: 16  EPNVI----TYSTLINGLCRTGHTIVALNLFEEMINGNGEFG-------------VVCKP 58
           EPNV+     +  L N L    HT +  ++  E +  N E               + C  
Sbjct: 50  EPNVLYALQHFQYLTNTLAFK-HTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQ 108

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--YANDSNEAKR 116
           D+ I   +++     G  D+A ++  ++K+    P V  YN ++        N  +    
Sbjct: 109 DSFI--CVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGA 166

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++  M  +G++PNV T++V++  LCKNGK++ A +LL  M + G  P+   Y T++   C
Sbjct: 167 VYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMC 226

Query: 177 LTGRVNRAK-----------------------------ELFVSMESM---GCKHNVFSYS 204
             GRV  A+                             E+F  M+ M   G   NV SYS
Sbjct: 227 EDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYS 286

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +I+      E+E AL++  +M+ +G +P V T+++L  G F   +V     L+  M   
Sbjct: 287 SVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLE 346

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALEL-FRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
           GV  +   Y T ++GLC +G + EA+++  R  +   C  ++ +YS L+ G  K+G L+ 
Sbjct: 347 GVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQG 406

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A E+++ +    +  +VV Y  M+  LC +   D+A+ L  +M   G  P  V FNT + 
Sbjct: 407 ASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK 466

Query: 384 G 384
           G
Sbjct: 467 G 467



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 6/317 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L+  +   G  PNV+ Y+TL+NGLC +G+   A+++   M     E    C+P+  
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM-----EKDCFCRPNVT 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++ G  K G +  A E+  +M +  + P+VV Y S++   C  +  ++A RL   M
Sbjct: 390 TYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNM 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P VVTF+  +  LC  G++  A ++++ M + G  P+   YN L+DG      +
Sbjct: 450 ATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNEL 509

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   +E    + N+ +Y+ ++ G+  + + E  L +   ML  G+KP  +T N +
Sbjct: 510 KEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVV 569

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                ++ +V  A +  D +     +  D  A+ + + G+C +  I EA+     +    
Sbjct: 570 IYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629

Query: 301 CELDIRSYSCLIDGLCK 317
              +I ++  L+ G  K
Sbjct: 630 IFPNIATWDVLVRGFFK 646



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 147/310 (47%), Gaps = 5/310 (1%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           +TY+ +I      ++ +    +  +M  + +  +  +F  +++    +G  + A ++   
Sbjct: 74  LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR 133

Query: 156 MIQIGVRPNAFVYNTLMDGFC--LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + + G +P   +YN L+D        + +    ++ +M   G + NVF+Y++L+   CKN
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++GA  L  EM  +G  P  V+Y T+   + E  +VE A ++       GV +     
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVS---VC 250

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              I GLC+ G + E   L   +     + ++ SYS +I  L   G +++A  +   + R
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                +V T++ ++      G++ +   L+  M  +GV P+ V +NTL+ G   +   ++
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAE 370

Query: 394 VVELLHRMDE 403
            V++  RM++
Sbjct: 371 AVDVCGRMEK 380



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF-- 246
           + +E + C  +  S+  ++N Y  +   + AL ++  +   G KPTV  YN L   L   
Sbjct: 99  MKIERIPCSQD--SFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGE 156

Query: 247 ---EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
              + H +     +++ M+  G+  + + Y   +  LCKNG +  A +L   +    C  
Sbjct: 157 SGNKFHMIG---AVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVP 213

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           D  SY+ ++  +C+ GR++ A E+       GV    V   N +I  LC +G++ +   L
Sbjct: 214 DGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV----VSVCNALICGLCREGRVGEVFGL 269

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +M   GV P+ V++++++       E    + +L +M  R
Sbjct: 270 MDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR 311


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 198/375 (52%), Gaps = 10/375 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K+    PN +T++ +I  +CR G    A+ +F E+   N      C PD   Y+T++ GL
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRN------CAPDNYTYSTLMHGL 215

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CKE  +D+A  LL +M+ +   P++V +N +I   C   D   A +L   M  +G  PN 
Sbjct: 216 CKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNE 275

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT++ ++  LC  GK+E+A  LL  M+     PN   + TL++GF + GR +    + VS
Sbjct: 276 VTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVS 335

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +E+ G + N + YS LI+G CK  +   A+ L+ EM+ KG  P  + Y+ L  GL    +
Sbjct: 336 LEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGK 395

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++ A     EM+  G   +++ Y + + G  + G   +A+ +++ +    C  +   YS 
Sbjct: 396 LDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSI 455

Query: 311 LIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           LI+GLCK G+   A  ++   L RG+ + DVV Y+ MIH  C    +++   LF  M  +
Sbjct: 456 LINGLCKDGKFMEALMVWKQMLSRGIKL-DVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ 514

Query: 370 G--VAPDCVAFNTLM 382
           G  V PD + +N L+
Sbjct: 515 GPVVQPDVITYNILL 529



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 207/390 (53%), Gaps = 9/390 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++    C P+  TYSTL++GLC+      A++L +EM    G F     P+ V
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM-QVEGTF-----PNLV 241

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  LCK+G + +A +L+  M  K   P+ VTYN+++ G C      +A  L  +M
Sbjct: 242 AFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VTF  +++     G+  + +++L  +   G R N +VY++L+ G C  G+ 
Sbjct: 302 VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKF 361

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A EL+  M   GC  N   YS LI+G C+  +++ A    SEM +KG  P   TY++L
Sbjct: 362 NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G FE     +A  ++ EM  +    +   Y   I+GLCK+G  +EAL +++ +     
Sbjct: 422 MRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGI 481

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LD+ +YS +I G C +  ++   +LF+ +     V+  DV+TYNI+++A C    + +A
Sbjct: 482 KLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRA 541

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            D+   M  +G  PD +  + + L  +R N
Sbjct: 542 IDILNIMLDQGCDPDFITCD-IFLKTLREN 570



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 197/402 (49%), Gaps = 43/402 (10%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL---LLQMKDKNINPD 94
           A++LF  M    GEF   CK     + ++++ + +EG  ++A E    ++  K  NI+P+
Sbjct: 115 AVDLFHRMW---GEFQ--CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPN 169

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
            +T+N VI+  C     ++A  +F E+  +   P+  T+S +M  LCK  +++EA  LL+
Sbjct: 170 ALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLD 229

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   +N L+   C  G + RA +L  +M   GC  N  +Y+ L++G C   
Sbjct: 230 EMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKG 289

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           ++E A+SL ++M+S    P  VT+ TL  G     +     ++   ++  G   + + Y 
Sbjct: 290 KLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYS 349

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL------- 327
           + I GLCK G   +A+EL++ +    C  +   YS LIDGLC+ G+L  A          
Sbjct: 350 SLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409

Query: 328 --------FHSLPRGVL--------------------IADVVTYNIMIHALCADGKMDKA 359
                   + SL RG                      I + V Y+I+I+ LC DGK  +A
Sbjct: 410 GYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEA 469

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             ++  M ++G+  D VA+++++ G    N   + ++L ++M
Sbjct: 470 LMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQM 511



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 18/184 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  ++ ++ + G + +V+ YS++I+G C        L LF +M+      G V +PD 
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ----GPVVQPDV 522

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  +++  C +  + +A ++L  M D+  +PD +T +  ++      +  +  R F++
Sbjct: 523 ITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLD 582

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +              +  L K  +   AS+++E+M+   + P A  +  ++   C    
Sbjct: 583 EL--------------VVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKN 628

Query: 181 VNRA 184
           V +A
Sbjct: 629 VRKA 632


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 210/400 (52%), Gaps = 6/400 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++K  G  PN  TY+ L++G C+      A  + E ++ G G       PD   Y T
Sbjct: 268 LLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIE-LMTGKGML-----PDVWTYNT 321

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC EG +D+A  L  +M+   + PDVVTYN++I G      S+ A +L  EM  +G
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V+ N VT ++++   C  GK++EAS ++  M++ G  P+ F YNT+++G+C  G++  A 
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAY 441

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++   M   G K + F+ + L++  C  K+++ A +L  +   +G     VTY TL +G 
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGY 501

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F+  Q +RA KL++EM+  G+ A    Y T I GLC +G   +A++    L       D 
Sbjct: 502 FKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + +I G C  G ++ A++  + +    L  D+ T NI++  LC +G ++K   LF  
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT 621

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +KG   D V +N ++    +        +L+  M+ +N
Sbjct: 622 WISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 208/401 (51%), Gaps = 8/401 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F      G +PNV T++ LI+G C   +T  AL L  +M    GE+G  C PD V Y T
Sbjct: 198 VFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQM----GEYG--CCPDNVTYNT 251

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++  LCK   + + ++LLLQMK+  + P+  TYN ++ G+C      EA  +   M  +G
Sbjct: 252 VLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKG 311

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+V T++ ++  LC  GK++EA +L + M    + P+   YNTL+DG C   R + A 
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAA 370

Query: 186 -ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            +L   M++ G K N  +++I+I  +C   +I+ A ++  +M+  G  P   TYNT+  G
Sbjct: 371 FKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMING 430

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +  ++  A+K+ DEM R G+  DT+   T +  +C    + +A  L    R     LD
Sbjct: 431 YCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILD 490

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y  LI G  K  +   A +L+  +    ++A ++TYN +I  LC  GK D+A D   
Sbjct: 491 EVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLN 550

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  KG+ PD    N ++ G        K  +  ++M E +
Sbjct: 551 ELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHS 591



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 211/403 (52%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +   +   G  P+V TY+T++ GLC  G    A+ L ++M      F +V  PD V
Sbjct: 299 EAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKM----ESFKLV--PDVV 352

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG  +    D A +L+ +MK + +  + VT+N +I+ FC     +EA  + ++M
Sbjct: 353 TYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKM 412

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  T++ +++  CK GKM EA ++++ M + G++ + F  NTL+   CL  ++
Sbjct: 413 VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQL 472

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L +     G   +  +Y  LI GY K+++ + AL L+ EM   GI  T++TYNT+
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    + ++A    +E+   G+  D       I G C  G + +A +    +     
Sbjct: 533 IRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI + + L+ GLC+ G L+    LF++        D VTYNI+I + C + +++ A D
Sbjct: 593 KPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFD 652

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  +ME K + PD   +N ++ G  +   T +  +L  +  E+
Sbjct: 653 LMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEK 695



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 214/402 (53%), Gaps = 9/402 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRT--GHTIV-ALNLFEEMINGNGEFGVVCKPDAVI 62
           +F K+K     PN++T +TL+N L R+   H++V +  +F++ +    + GV  +P+   
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAV----KLGV--QPNVNT 213

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I G C +   ++A  L+ QM +    PD VTYN+V+   C  +   + + L ++M 
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN  T+++++   CK   ++EA++++ELM   G+ P+ + YNT++ G C  G+++
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKID 333

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   MES     +V +Y+ LI+G  +++  + A  L  EM ++G+K   VT+N + 
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                  +++ A  +  +M   G + D + Y T I+G CK G + EA ++   +     +
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  + + L+  +C   +L  A+ L     +   I D VTY  +I     D + D+A  L
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + +M+  G+    + +NT++ G   + +T + V+ L+ + E+
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 41/291 (14%)

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR---AKELFVSMESMGCKHNVFSYSILI 207
           Q+   M ++  RPN    NTL++    +   +    ++E+F     +G + NV +++ILI
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI---------------------GLF 246
           +GYC +   E AL L ++M   G  P  VTYNT+                       GLF
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 247 --------------EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
                         ++  ++ A ++ + M   G+  D W Y T + GLC  G I EA+ L
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +   K   D+ +Y+ LIDG  +      A++L   +    +  + VT+NIMI   C 
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +GK+D+A ++ + M   G +PDC  +NT++ G  +     K+ E    MDE
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCK---AGKMAEAYKMMDE 446



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 17/292 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K +  G   + +TY TLI G  +      AL L+EEM     E G+V     +
Sbjct: 474 DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM----KETGIVAT--II 527

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII GLC  G  D+A + L ++ +K + PD  T N +I G+C+     +A +   +M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  ++P++ T ++++  LC+ G +E+   L    I  G   +   YN ++  FC   R+
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-------IKPT 234
             A +L   ME    + + ++Y+ ++ G  K    E A  L  +   KG         P 
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707

Query: 235 VVT----YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           + T    Y+     L    + + A KLF + ++ GV+ + + Y   +DGL K
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 52/276 (18%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++K  G    +ITY+T+I GLC +G T  A++   E++    E G+V  PD   
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL----EKGLV--PDEST 563

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              II G C EG V+KA +   +M + ++ PD+ T N ++RG C      +   LF   +
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------- 175
            +G   + VT+++I+   CK  ++E+A  L+  M    + P+ + YN ++ G        
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683

Query: 176 ---------------------------------------CLTGRVNRAKELFVSMESMGC 196
                                                  C  G+   A +LF   E  G 
Sbjct: 684 EAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             N ++Y  L++G  K ++     SL   M+S  I+
Sbjct: 744 SLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 200/383 (52%), Gaps = 10/383 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  +F ++    CEP+V TY TL++GLC+      A+ L +EM I G       C P +V
Sbjct: 191 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG-------CFPSSV 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+GLCK+G + +  +L+  M  K   P+ VTYN++I G C     ++A  L   M
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN VT+  +++ L K G+  +   LL  + + G   N + Y+TL+ G     + 
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L+  M   GC+ N+  YS LI+G C+  +++ A  +  EM++KG  P   TY++L
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G F+    ++A +++ EM ++    +   Y   I GLC++G + EA+ ++  +     
Sbjct: 424 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+ +YS +I GLC +G +++  +LF+ +         DVVTYNI++ ALC    +  A
Sbjct: 484 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 543

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
            DL   M  +G  PD +  N  +
Sbjct: 544 IDLLNSMLDRGCNPDLITCNIFL 566



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 201/384 (52%), Gaps = 5/384 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF ++   F C   V ++++++N + + G    AL  +E  + G         P+ 
Sbjct: 117 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS----PNV 172

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  +I  +CK G VD+A E+  +M  +   PDV TY +++ G C  +  +EA  L  E
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+ VTF+V+++ LCK G M   ++L++ M   G  PN   YNT+++G CL G+
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  L   M +  C  N  +Y  LING  K       + L S +  +G       Y+T
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF+  + E A  L+ +M   G   +   Y   IDGLC+ G + EA E+   +    
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +YS LI G  K+G  + A  ++  + +   + + + Y+++IH LC DGK+ +A 
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++  M  +G+ PD VA+++++ G
Sbjct: 473 MMWTHMLGRGLRPDVVAYSSMIHG 496



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 164/333 (49%), Gaps = 52/333 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF---EEMINGNGEFGVV--- 55
           +A +L  ++ A  C PN +TY TLINGL + G ++  ++L    EE  +   E+      
Sbjct: 295 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 354

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C+P+ V+Y+ +IDGLC+EG +D+AKE+L +M +K   
Sbjct: 355 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 414

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TY+S+I+GF    +S +A R++ EM      PN + +SV++  LC++GK+ EA  +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCKHNVFSYSILINGY 210
              M+  G+RP+   Y++++ G C  G V    +LF  M  +    + +V +Y+IL+   
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE------------------IHQVE 252
           CK   I  A+ L + ML +G  P ++T N     L E                  +H+ +
Sbjct: 535 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 594

Query: 253 R---AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           R   A K+ + M +  +  +   +   I  LCK
Sbjct: 595 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 142/280 (50%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNV++F++++  +CK G ++ A ++   M      P+ F Y TLMDG C   R++ A 
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+  GC  +  ++++LING CK  ++     L   M  KG  P  VTYNT+  GL
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++++A  L D M       +   Y T I+GL K G  V+ + L  +L       + 
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS LI GL K  + + A  L+  +       ++V Y+ +I  LC +GK+D+A ++  +
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M  KG  P+   +++L+ G  +   + K + +   M + N
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 447



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 146/313 (46%), Gaps = 7/313 (2%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           T+ S+I  +  + D     ++F  M  +        F ++     K    E+A +L   M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 157 I-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK----HNVFSYSILINGYC 211
           + +   R     +N++++     G  +RA E +     +G K     NV S++++I   C
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYEC--GVGGKTNISPNVLSFNLVIKAMC 183

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   ++ A+ ++ EM  +  +P V TY TL  GL +  +++ A  L DEMQ  G    + 
Sbjct: 184 KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSV 243

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +   I+GLCK G +V   +L   + +  C  +  +Y+ +I+GLC  G+L  A  L   +
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                + + VTY  +I+ L   G+      L   +E +G   +  A++TL+ G  +  ++
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 392 SKVVELLHRMDER 404
            + + L  +M E+
Sbjct: 364 EEAMGLWKKMVEK 376



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 52/233 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  +  ++   GC PN  TYS+LI G  +TG++  A+ +++EM   N     +C     
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQM--KDKN 90
                                   +PD V Y+++I GLC  G V+   +L  +M  ++ +
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 519

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM------------- 137
             PDVVTYN ++R  C  N  + A  L   M+D+G  P+++T ++ +             
Sbjct: 520 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 579

Query: 138 ----DELC----KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
               DEL     K  ++  A++++E+M+Q  + PNA  +  ++   C   +V 
Sbjct: 580 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC P V+TY  L+ GLCR            +        G V + + V
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRV----------RQADEARAMLGRVPELNVV 312

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ T+I G   EG + +A EL   M  K   PD  TY+ ++ G C       A RL  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVVT+++++   CKNG  ++   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+    +TYNT+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  +L L   +     
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ LI  LCK  R++ A EL   +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L   +  + V PD + +N L+
Sbjct: 613 LLEKLHNENVHPDIITYNILI 633



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 196/390 (50%), Gaps = 10/390 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P   T+      LCR G    AL L   M          C PDAV+Y T+I  LC +G 
Sbjct: 172 PPTTFTFGVAARALCRLGRADEALALLRGMARHG------CVPDAVLYQTVIHALCDQGG 225

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V +A  LL +M       DV T++ V+RG C      EA RL   MM +G  P V+T+  
Sbjct: 226 VTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 285

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+  + +EA  +L  + ++    N  ++NT++ G    G++  A EL+ +M   G
Sbjct: 286 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ +  +YSIL++G CK   I  A+ L  EM  KG  P VVTY  +     +    +   
Sbjct: 342 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L +EM   G+  ++  Y   I  LCK+G + EA+ L + +R   C  DI SY+ +I  L
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C + +++ A  +F +L    ++A+ +TYN +IHAL  DG+   A  L  +M   G + D 
Sbjct: 462 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 521

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           V++N L+    ++    + + LL  M E+ 
Sbjct: 522 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 45/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   +   GC P+ + Y T+I+ LC  G    A  L  EM+       + C  D  
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL------MGCAADVN 246

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G+C  G V +A  L+ +M  K   P V+TY  +++G C    ++EA+     M
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AM 302

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV F+ ++      GK+ EA++L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN---------------------------- 213
             A  L   ME  G   NV +Y+I+++ +CKN                            
Sbjct: 363 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 214 -------KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                    ++ A+ L  EM S+G  P + +YNT+   L    Q+E A  +F+ +   GV
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+   Y T I  L ++G   +A+ L + + +  C LD+ SY+ LI  +CK G +  +  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    +  + V+YNI+I  LC + ++  A +L   M  +G+APD V +NTL+ G  
Sbjct: 543 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 602

Query: 387 RNNETSKVVELLHRMDERN 405
           +       + LL ++   N
Sbjct: 603 KMGWMHAALNLLEKLHNEN 621



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 29/310 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  L+  +   GC+P+  TYS L++GLC+ G    A+ L  EM        VV      
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 56  ---CKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                     ++  Y  +I  LCK+G +D+A  L+ +M+ +  N
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+ +YN++I   C      EA+ +F  ++++GV  N +T++ I+  L ++G+ ++A +L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI  G   +   YN L+   C  G V+R+  L   M   G K N  SY+ILI+  CK
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + +  AL L  +ML++G+ P +VTYNTL  GL ++  +  A  L +++    V  D   
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628

Query: 273 YRTFIDGLCK 282
           Y   I   CK
Sbjct: 629 YNILISWHCK 638



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 155/326 (47%), Gaps = 6/326 (1%)

Query: 78  KAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSV 135
           +A  LL Q+  +  + P   +YN V+     A+   +A  L+  M+ +  V P   TF V
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
               LC+ G+ +EA  LL  M + G  P+A +Y T++   C  G V  A  L   M  MG
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V ++  ++ G C    +  A  L   M++KG  P V+TY  L  GL  + Q + A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +   +    V      + T I G    G + EA EL+ T+ +  C+ D  +YS L+ GL
Sbjct: 301 AMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GR+  A  L   + +     +VVTY I++H+ C +G  D    L  +M AKG+  + 
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
             +N ++    ++    + + L+  M
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEM 442



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 2/189 (1%)

Query: 219 ALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTF 276
           AL L  ++  + G++P+  +YN +   L        A  L+  M  R  V   T+ +   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
              LC+ G   EAL L R +    C  D   Y  +I  LC  G +  A  L + +     
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
            ADV T++ ++  +C  G++ +A  L   M  KG  P  + +  L+ G  R  +  +   
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 397 LLHRMDERN 405
           +L R+ E N
Sbjct: 302 MLGRVPELN 310


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 46/442 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-HTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A   F ++K F C P+V TY+ ++  + R     ++A  ++ EM+  N      C P+ 
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN------CSPNL 198

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  ++DGL K+G    A+++   M  + I+P+ VTY  +I G C    +++A++LF E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V  + ++D  CK G+M EA +LL L  + G       Y++L+DG     R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A EL+ +M     K ++  Y+ILI G  K  +IE AL L S M SKGI P    YN 
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L     +E    L  EM       D   +   I  +C+NG + EA E+F  +    
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG-------------------------V 335
           C   + +++ LIDGLCKSG LK A  L H +  G                         +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498

Query: 336 LIA--------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           L A              D+V+YN++I+  C  G +D A  L   ++ KG++PD V +NTL
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G  R     +  +L +  D+
Sbjct: 559 INGLHRVGREEEAFKLFYAKDD 580



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 207/461 (44%), Gaps = 94/461 (20%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           YS+LI+GL R      A  L+  M+  N       KPD ++YT +I GL K G ++ A +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKN------IKPDIILYTILIQGLSKAGKIEDALK 359

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL  M  K I+PD   YN+VI+  C      E + L +EM +    P+  T ++++  +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--------- 192
           +NG + EA ++   + + G  P+   +N L+DG C +G +  A+ L   ME         
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 193 ------------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
                                           G   ++ SY++LING+C+  +I+GAL L
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF---DEMQRHGVAADTWAYRTFIDG 279
            + +  KG+ P  VTYNTL  GL  + + E AFKLF   D+  RH  A     YR+ +  
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF-RHSPA----VYRSLMTW 594

Query: 280 LCKNGYIVEALELF----------------------------RTLRIL------KCELDI 305
            C+   ++ A  L+                            R LR L      K EL +
Sbjct: 595 SCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTL 654

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-- 363
             Y+  + GLC+SGR   A  +F  L    ++    +   +IH LC   ++D A ++F  
Sbjct: 655 GPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLY 714

Query: 364 -LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV-ELLHRMD 402
            LD   K +   C   N L+   + + E  ++V +L +RM+
Sbjct: 715 TLDNNFKLMPRVC---NYLLSSLLESTEKMEIVSQLTNRME 752



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 175/380 (46%), Gaps = 44/380 (11%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +ID L ++   D   + L ++K   ++ D   +  +I  +     + +A   F  M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-----MIQIGVRPNAFVYNTLMDGFCL 177
           +   +P+V T++VI+  + +    EE   +L       M++    PN + +  LMDG   
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR + A+++F  M   G   N  +Y+ILI+G C+    + A  L+ EM + G  P  V 
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N L  G  ++ ++  AF+L    ++ G       Y + IDGL +     +A EL+  + 
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP--------------------RGVL- 336
               + DI  Y+ LI GL K+G+++ A +L  S+P                    RG+L 
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390

Query: 337 --------------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
                           D  T+ I+I ++C +G + +A ++F ++E  G +P    FN L+
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450

Query: 383 LGCIRNNETSKVVELLHRMD 402
            G  ++ E  +   LLH+M+
Sbjct: 451 DGLCKSGELKEARLLLHKME 470



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 167/359 (46%), Gaps = 18/359 (5%)

Query: 47  NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
           +GN EF         I   +I  L K+  ++ A E L+    KNI   V+  + V R   
Sbjct: 26  SGNAEFN--------ISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIK-DEVNRQLG 76

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
           +        R FI    +    +  +F +++D L ++   +   Q LE +   GV  +++
Sbjct: 77  F--------RFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSY 128

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI-EGALSLYSE 225
            +  L+  +   G   +A E F  M+   C+ +VF+Y++++    + +     A ++Y+E
Sbjct: 129 CFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P + T+  L  GL++  +   A K+FD+M   G++ +   Y   I GLC+ G 
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             +A +LF  ++      D  +++ L+DG CK GR+  A+EL     +   +  +  Y+ 
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I  L    +  +A +L+ +M  K + PD + +  L+ G  +  +    ++LL  M  +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF-IGLFEIH 249
           ++S G   + + + +LI+ Y K    E A+  +  M     +P V TYN +  + + E  
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
               AF +++EM +   + + + +   +DGL K G   +A ++F  +       +  +Y+
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI GLC+ G    A +LF+ +       D V +N ++   C  G+M +A +L    E  
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G       +++L+ G  R    ++  EL   M ++N
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 209/400 (52%), Gaps = 15/400 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++    C PN +T++T I   C+ G    A+ L E M      +G  C PD V
Sbjct: 228 KAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM----PRYG--CTPDVV 281

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+++G  ++G VD A  LL  M  K   P+ V YN+ ++G C A    +   L  EM
Sbjct: 282 IYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKGLCMAERWKDVGELIAEM 338

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TFS++   LC++G ++ A +++E M + G RP+  +YNTL++ F   GRV
Sbjct: 339 VRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRV 398

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   ++SM C  +  S++  +   C+ +       L ++ML +      +T+N L
Sbjct: 399 DDALML---LDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNIL 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V  A ++F++M ++    D   Y + I+G  + G +  A+ELF+++    C
Sbjct: 456 IDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PC 512

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI SY+ ++ GLC++ R + A EL  ++ R     + +T+NI+I++LC  G  D+A +
Sbjct: 513 KPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIE 572

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F  M   G  PD   +N L+ G          + LL  M
Sbjct: 573 VFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM 612



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 194/418 (46%), Gaps = 47/418 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+TY+ LING CR+G    ALNL   M            PD   Y T++ GLC     +
Sbjct: 177 NVVTYTALINGYCRSGRLADALNLIASM---------PVAPDTYTYNTVLKGLCGAKQWE 227

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           KA+EL+ +M   N +P+ VT+ + IR FC     + A +L   M   G  P+VV +S ++
Sbjct: 228 KAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           +   + G++++A  LL  M+    +PN   YN  + G C+  R     EL   M    C 
Sbjct: 288 NGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCP 344

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N  ++S+L +  C++  ++ A+ +  +M   G +P VV YNTL     E  +V+ A  L
Sbjct: 345 PNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALML 404

Query: 258 FD--------------------------------EMQRHGVAADTWAYRTFIDGLCKNGY 285
            D                                +M R         +   ID LC++G 
Sbjct: 405 LDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGL 464

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  A+E+F  +   +C  DI +YS LI+G  + G ++ A ELF S+P      D+ +YN 
Sbjct: 465 VNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNA 521

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++  LC   + + A +L  +M  K   P+ + FN L+    +     + +E+  +M E
Sbjct: 522 VLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPE 579



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 196/401 (48%), Gaps = 19/401 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  +   LK  G   + ++++TL+ G CR G    A  + E   ++G          + 
Sbjct: 128 DAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA--------NV 178

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT +I+G C+ G +  A  L+  M    + PD  TYN+V++G C A    +A+ L  E
Sbjct: 179 VTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEE 235

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PN VTF+  +   C+NG ++ A QLLE M + G  P+  +Y+TL++GF   GR
Sbjct: 236 MIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGR 295

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A    V + +M CK N   Y+  + G C  +  +    L +EM+ K   P   T++ 
Sbjct: 296 VDDA---LVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSM 352

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +   V+ A ++ ++MQ++G   D   Y T I+   + G + +AL L  ++    
Sbjct: 353 LTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML--- 409

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  S++  +  LC++ R     EL   + R       +T+NI+I +LC  G ++ A 
Sbjct: 410 CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAI 469

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++F  M      PD V +++L+ G          +EL   M
Sbjct: 470 EVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM 510



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 173/329 (52%), Gaps = 15/329 (4%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN  T+S L + LC+ G    A+ + E+M     ++G  C+PD VIY T+I+   ++G
Sbjct: 343 CPPNEATFSMLTSCLCQHGLVDCAMEVVEQM----QKYG--CRPDVVIYNTLINYFSEQG 396

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD A  LL  M     NPD +++N+ ++  C      + + L  +M+ +      +TF+
Sbjct: 397 RVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFN 453

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++D LC++G +  A ++ E M +    P+   Y++L++GF   G V  A ELF   +SM
Sbjct: 454 ILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELF---QSM 510

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            CK ++FSY+ ++ G C+    E A  L + M  K   P  +T+N L   L +    +RA
Sbjct: 511 PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRA 570

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            ++F +M  +G   D + Y   I+G  + G + +AL L  T   + C+ D  SY+  + G
Sbjct: 571 IEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLST---MSCKPDAISYNSTLKG 627

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           LC++ R K A E+   + R     + VT+
Sbjct: 628 LCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 181/411 (44%), Gaps = 53/411 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++  +GC P+V+ YSTL+NG    G    AL L   M+         CKP+ V 
Sbjct: 264 AVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---------CKPNTVC 314

Query: 63  YTTIIDGLC-----------------------------------KEGFVDKAKELLLQMK 87
           Y   + GLC                                   + G VD A E++ QM+
Sbjct: 315 YNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQ 374

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                PDVV YN++I  F      ++A  L   M+     P+ ++F+  +  LC+  +  
Sbjct: 375 KYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWY 431

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +  +L+  M++         +N L+D  C  G VN A E+F  M    C  ++ +YS LI
Sbjct: 432 DVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLI 491

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ +   +E A+ L+  M     KP + +YN +  GL    + E A +L   M R    
Sbjct: 492 NGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCP 548

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   +   I+ LC+ G+   A+E+F+ +       DI +Y+ LI+G  + GRL  A  L
Sbjct: 549 PNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNL 608

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             ++       D ++YN  +  LC   +  +A ++  +M  K   P+ V F
Sbjct: 609 LSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 125/227 (55%), Gaps = 15/227 (6%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +T++ LI+ LC+ G    A+ +FE+M          C PD V Y+++I+G  ++G V+ A
Sbjct: 450 MTFNILIDSLCQHGLVNHAIEVFEQMPK------YRCTPDIVTYSSLINGFSEQGLVESA 503

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            EL   M  K   PD+ +YN+V++G C A    +A  L   M  +   PN +TF+++++ 
Sbjct: 504 IELFQSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINS 560

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LC+ G  + A ++ + M + G  P+ F YN L++GF   GR++ A  L   + +M CK +
Sbjct: 561 LCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNL---LSTMSCKPD 617

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY---NTLFI 243
             SY+  + G C+ +  + A  + +EML K   P  VT+   N LFI
Sbjct: 618 AISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFI 664



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 6/161 (3%)

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++  ++ A +L   M      A   A    I  LC +  + +A  +   L+      D
Sbjct: 86  LVQLEDLDAALRLVGSMPSSEPPA-VIACNILIKKLCAHRRLADAERVLDALK-ESGSAD 143

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             S++ L+ G C+ GRL  A  +  +  +    A+VVTY  +I+  C  G++  A +L  
Sbjct: 144 AVSHNTLVAGYCRDGRLADAERVLEAA-KVSGAANVVTYTALINGYCRSGRLADALNLIA 202

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            M    VAPD   +NT++ G     +  K  EL+  M   N
Sbjct: 203 SMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNN 240


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 200/384 (52%), Gaps = 10/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
            A  +F ++    CEP+V TY TL++GLC+      A+ L +EM I G       C P +
Sbjct: 206 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG-------CFPSS 258

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I+GLCK+G + +  +L+  M  K   P+ VTYN++I G C     ++A  L   
Sbjct: 259 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PN VT+  +++ L K G+  +   LL  + + G   N + Y+TL+ G     +
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 378

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  L+  M   GC+ N+  YS LI+G C+  +++ A  +  EM++KG  P   TY++
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G F+    ++A +++ EM ++    +   Y   I GLC++G + EA+ ++  +    
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKMDK 358
              D+ +YS +I GLC +G +++  +LF+ +         DVVTYNI++ ALC    +  
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 558

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLM 382
           A DL   M  +G  PD +  N  +
Sbjct: 559 AIDLLNSMLDRGCNPDLITCNIFL 582



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 201/384 (52%), Gaps = 5/384 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF ++   F C   V ++++++N + + G    AL  +E  + G         P+ 
Sbjct: 133 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS----PNV 188

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  +I  +CK G VD+A E+  +M  +   PDV TY +++ G C  +  +EA  L  E
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+ VTF+V+++ LCK G M   ++L++ M   G  PN   YNT+++G CL G+
Sbjct: 249 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 308

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +++A  L   M +  C  N  +Y  LING  K       + L S +  +G       Y+T
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF+  + E A  L+ +M   G   +   Y   IDGLC+ G + EA E+   +    
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  +  +YS LI G  K+G  + A  ++  + +   + + + Y+++IH LC DGK+ +A 
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 488

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++  M  +G+ PD VA+++++ G
Sbjct: 489 MMWTHMLGRGLRPDVVAYSSMIHG 512



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 164/333 (49%), Gaps = 52/333 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF---EEMINGNGEFGVV--- 55
           +A +L  ++ A  C PN +TY TLINGL + G ++  ++L    EE  +   E+      
Sbjct: 311 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 370

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                  C+P+ V+Y+ +IDGLC+EG +D+AKE+L +M +K   
Sbjct: 371 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 430

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TY+S+I+GF    +S +A R++ EM      PN + +SV++  LC++GK+ EA  +
Sbjct: 431 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 490

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ESMGCKHNVFSYSILINGY 210
              M+  G+RP+   Y++++ G C  G V    +LF  M  +    + +V +Y+IL+   
Sbjct: 491 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 550

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE------------------IHQVE 252
           CK   I  A+ L + ML +G  P ++T N     L E                  +H+ +
Sbjct: 551 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 610

Query: 253 R---AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           R   A K+ + M +  +  +   +   I  LCK
Sbjct: 611 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 142/280 (50%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PNV++F++++  +CK G ++ A ++   M      P+ F Y TLMDG C   R++ A 
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+  GC  +  ++++LING CK  ++     L   M  KG  P  VTYNT+  GL
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++++A  L D M       +   Y T I+GL K G  V+ + L  +L       + 
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS LI GL K  + + A  L+  +       ++V Y+ +I  LC +GK+D+A ++  +
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M  KG  P+   +++L+ G  +   + K + +   M + N
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN 463



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 7/263 (2%)

Query: 147 EEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK----HNVF 201
           E+A +L   M+ +   R     +N++++     G  +RA E +     +G K     NV 
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYEC--GVGGKTNISPNVL 189

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S++++I   CK   ++ A+ ++ EM  +  +P V TY TL  GL +  +++ A  L DEM
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           Q  G    +  +   I+GLCK G +V   +L   + +  C  +  +Y+ +I+GLC  G+L
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A  L   +     + + VTY  +I+ L   G+      L   +E +G   +  A++TL
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +  ++ + + L  +M E+
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEK 392



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 52/233 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  +  ++   GC PN  TYS+LI G  +TG++  A+ +++EM   N     +C     
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQM--KDKN 90
                                   +PD V Y+++I GLC  G V+   +L  +M  ++ +
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM------------- 137
             PDVVTYN ++R  C  N  + A  L   M+D+G  P+++T ++ +             
Sbjct: 536 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 595

Query: 138 ----DELC----KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
               DEL     K  ++  A++++E+M+Q  + PNA  +  ++   C   +V 
Sbjct: 596 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 207/400 (51%), Gaps = 15/400 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++    C PN +T++T I   C+ G    A+ L E+M     ++G  C PD +
Sbjct: 25  QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM----PKYG--CTPDVI 78

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+++G  + G VD+A +LL  M      P+ V YN+ ++G C A    E   L  EM
Sbjct: 79  IYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEM 135

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TFS +++ LC+N  +E A ++LE M + G  P+   YNT++  F    R 
Sbjct: 136 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 195

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   ++SM CK +  S++ ++   CK K    A+ L ++ML K  +   +T+N L
Sbjct: 196 DDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 252

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  QV+ A ++F+ M ++    D   Y + I+G  + G    A +LFR+   + C
Sbjct: 253 IDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRS---MPC 309

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+  + GLC + R   A EL   +     + + VT+NI+I +LC  G +++A D
Sbjct: 310 RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAID 369

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++  M   G+ PD   +N L+ G          ++ L  M
Sbjct: 370 VYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 409



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 38/376 (10%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   Y T++ GLC     ++A+EL+ +M   + +P+ VT+ + IR FC     + A  L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   G  P+V+ +S +++   ++G+++EA +LL  M+    RPN   YN  + G C+
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCI 121

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            GR     EL   M    C  N  ++S LIN  C+N+ +E A+ +  +M   G  P VV+
Sbjct: 122 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 181

Query: 238 YNTLFIGLFEIHQVERAFKL------------FDEMQRHGVAADTW-------------- 271
           YNT+     +  + + A KL            F+ + +    A  W              
Sbjct: 182 YNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKD 241

Query: 272 ------AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                  +   ID LC+NG + +A+E+F  +   +C  DI +YS LI+G  + G  ++A+
Sbjct: 242 CRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAF 301

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +LF S+P     AD+ +YN  +  LC   + D A +L  DM  +   P+ V FN L+   
Sbjct: 302 DLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 358

Query: 386 IRNNETSKVVELLHRM 401
            +    ++ +++  +M
Sbjct: 359 CQKGLVNRAIDVYEQM 374



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 183/342 (53%), Gaps = 15/342 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++    C PN  T+STLIN LC+      A+ + E+M     ++G +  PD V
Sbjct: 127 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM----QKYGYM--PDVV 180

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII     +   D A +LL  M  K   PD +++N+V++  C A    +A  L  +M
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKM 237

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + N +TF++++D LC+NG++++A ++ ELM +    P+   Y++L++GF   G  
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF    SM C+ ++FSY+  + G C     + A  L ++M+++   P  VT+N L
Sbjct: 298 EMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V RA  ++++M ++G+  D + Y   I+G  + G + +AL+   T   + C
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLST---MPC 411

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           E D  SY+ ++ GLC++ R K A +L   + R     + VT+
Sbjct: 412 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 187/402 (46%), Gaps = 35/402 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM----------------- 45
           A  L  ++  +GC P+VI YSTL+NG    G    AL L   M                 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLC 120

Query: 46  INGNGE-FGVV--------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           I G  E  G +        C P+   ++T+I+ LC+   V+ A E+L QM+     PDVV
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           +YN++I  F     +++A +L   M+    +P+ ++F+ ++  LCK  +  +A +L+  M
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++   R N   +N L+D  C  G+V  A E+F  M    C  ++ +YS LING+ +    
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  L+  M  +     + +YN    GL    + + A +L  +M       +   +   
Sbjct: 298 EMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I  LC+ G +  A++++  +       DI +Y+ LI+G  + GRL  A +   ++P    
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---C 411

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             D ++YN ++  LC   +   A  L  +M  K   P+ V F
Sbjct: 412 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 157/294 (53%), Gaps = 6/294 (2%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD  TYN+V++G C A    +A+ L  EM+     PN VTF+  +   C+NG ++ A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +LLE M + G  P+  +Y+TL++GF   GRV+ A +L   + +M C+ N   Y+  + G 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALKGL 119

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C     E    L +EM+ K   P   T++TL   L +   VE A ++ ++MQ++G   D 
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
            +Y T I          +AL+L +++    C+ D  S++ ++  LCK+ R   A EL   
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           + +     + +T+NI+I +LC +G++  A ++F  M      PD V +++L+ G
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLING 290



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P   TYNT+  GL    Q E+A +L  EM R+    +   + T I   C+NG +  A+
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           EL   +    C  D+  YS L++G  + GR+  A +L +++   +   + V YN  +  L
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGL 119

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C  G+ ++  +L  +M  K   P+   F+TL+    +N      VE+L +M +
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 172


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 200/383 (52%), Gaps = 13/383 (3%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           S +   LCR   ++ ++        G GE     +    + T  +D L      D A E 
Sbjct: 132 SDVATKLCRRHRSLGSVK------GGAGETARTVRRKPTVGTGRLDRL------DDAMEK 179

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF-SVIMDELC 141
              M D  +  D   Y  +I+G C   D  +AK L  +M+ +G+ P  + F + I++ LC
Sbjct: 180 FKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 239

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A  L  SMES+G + +++
Sbjct: 240 KEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 299

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++GYCK+  I+ AL+L+ +ML K +  T V+YN +  GLF+  +   A ++F EM
Sbjct: 300 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEM 359

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+A     Y T + GLC+N    EA  L   L  +  + DI +++ +I  + K GR+
Sbjct: 360 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRM 419

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A ELF ++    L+  ++TY +MI  L  +   + A +LF  ME  G  PD    N +
Sbjct: 420 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEI 479

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           +   +   E +K    L ++D++
Sbjct: 480 IRMLLNKGEIAKAGHYLSKIDKK 502



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 170/354 (48%), Gaps = 5/354 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +   G   +   Y  LI G C  G  + A  L  +M++       +  P   
Sbjct: 175 DAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKG-----IPPPCIK 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T+II+ LCKEG V + K+++  +      P+++T+NS++ G+C   +  EA  L   M
Sbjct: 230 FFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV+P++ T++ ++D  CK+G++++A  L   M+   V   +  YN ++ G     R 
Sbjct: 290 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AKE+F  M   G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K  ++T+N +
Sbjct: 350 VVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIV 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              +F++ +++ A +LF  +  +G+      YR  I  L K     +A  LF ++    C
Sbjct: 410 IRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGC 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             D    + +I  L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 470 TPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGK 523



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 10/288 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+IT+++L++G C  G+   A+ L + M +      V  +PD   Y T++DG CK 
Sbjct: 258 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 311

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A  L   M  K +    V+YN ++ G   A  +  AK +F EM++ G+  ++ T+
Sbjct: 312 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTY 371

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC+N   +EA+ LLE +  + V+ +   +N ++      GR+  AKELF ++ +
Sbjct: 372 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAIST 431

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M   G  P     N +   L    ++ +
Sbjct: 432 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAK 491

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEALELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 492 AGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 539


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 63/463 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF ++   G EPN +TY+ LI+ LC+ G    AL LF++M               I
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  + G + +              P A  Y+ +I GLC+ G +  A EL  +M ++ I 
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA 475

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +  T+ ++I GFC     +EA RLF +M+D  V PN VTF+V+++  C  G + +A QL
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+++G++P+ + Y +L+ G CLT  V++A E    +E+     N FS + L+ G  +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFR 595

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L+ EM  +G+K  +V++  +     + H  E++  LF EM+  GV  D   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL----------- 321
           Y   ID L K   +++AL  +  + I     +  +++ LI+ LCKSG L           
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 322 -------KIAWELF----------------HSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                  K  +  F                HS      +A +V++NI+I  LC  GK+ +
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A DL   +   G +PDC++++T++    +  + +K  EL + M
Sbjct: 776 AIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G   + +TY TL+ G CR     +AL +  +MI      G V  P   
Sbjct: 251 EAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEA 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID L K+  V++A  L  ++ D  + P+V  YN++I   C     ++A RLF EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN VT+++++  LCK G +E+A  L + M   G++   + YN+L++G+C  G +
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA+ L   M   G      SYS LI G C+N ++  A+ L+ EM  +GI     T+  L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTAL 484

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  +++ A +LFD+M    V  +   +   I+G C  G I +A +L+  +  +  
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y  LI GLC +  +  A E    L     + +  +   +++ L  +G+  + + 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYH 604

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+ +M  +GV  D V+F  ++   ++ ++  K   L   M E+
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 193/396 (48%), Gaps = 6/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   G   +   Y+  I   C + +   A  L   M +     GV  K  AV 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  D VTY +++ GFC   +   A R+  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+    S ++DEL K   +EEA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK TV  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +  A+EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +  M   G+ PD   + +L+ G    +  SK  E +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 187/384 (48%), Gaps = 9/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF K+      PN +T++ +I G C  G+   A  L+++M+    E G+  KPD  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC    V KA E +  +++     +  +  +++ G        E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++V+F++I+    K    E++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P   TYN  
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC- 728

Query: 242 FIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           F+  F     +E+A  L   M + G  A   ++   I GLCK G I EA++L R +    
Sbjct: 729 FLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SYS +I  LCK G +  A+EL++ +    L  DVV YNI I      G+ DKA 
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++ +M   GV P+   +  L+ G
Sbjct: 848 GIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 165/327 (50%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A++L  +M    ++ D   Y + IR +C + + + A+ L + M  +GV+ + V ++V+M 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCKN +++EA ++  +M+ IGV  +   Y TL+ GFC    +  A  +   M  +G   
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  + S +I+   K + +E A SL  ++   G+ P V  YN L   L +  + + A +LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM   G+  +   Y   I  LCK G I +AL LF  +R    ++ +  Y+ LI+G CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G L  A  L   + +  L     +Y+ +I  LC +G +  A +L  +M  +G+A +   F
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTF 481

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
             L+ G  ++ +  +   L  +M + N
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSN 508



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 136/245 (55%), Gaps = 9/245 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           ++  LF ++K  G +P+ I Y+ +I+ L +  + I ALN +++M I+G         P+ 
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYS-------PNT 688

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +T +I+ LCK G++  A+ L  +M   N+ P+  TYN  +  F    D  +AK L   
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ QG   ++V+F++++  LCK GK++EA  L+  + + G  P+   Y+T++   C  G 
Sbjct: 749 ML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGD 807

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P   TY  
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRA 867

Query: 241 LFIGL 245
           L  G+
Sbjct: 868 LLSGI 872



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  T S I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LID LCK+ R   A  LF  +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M  KG+      +N+L+ G  +     +   LL  M
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 28/192 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVCKPD----------- 59
           G  PN +T++ LIN LC++G+   A  L +EM+ GN    +F   C  D           
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 60  --------------AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
                          V +  +I GLCK G + +A +L+ ++ +   +PD ++Y+++I   
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           C   D N+A  L+ EM+ +G++P+VV +++ +     +G+ ++A  +   MI+ GV+PN 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862

Query: 166 FVYNTLMDGFCL 177
             Y  L+ G  L
Sbjct: 863 DTYRALLSGISL 874


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++   GC P V+TY  L+ GLCR            +        G V + + V
Sbjct: 247 EAARLVDRMMTKGCMPGVMTYGFLLQGLCR----------VRQADEARAMLGRVPELNVV 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++ T+I G   EG + +A EL   M  K   PD  TY+ ++ G C       A RL  EM
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVVT+++++   CKNG  ++   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+    +TYNT+
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  +L L   +     
Sbjct: 477 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 536

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  SY+ LI  LCK  R++ A EL   +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 596

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L   +  + V PD + +N L+
Sbjct: 597 LLEKLHNENVHPDIITYNILI 617



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 196/390 (50%), Gaps = 10/390 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P   T+      LCR G    AL L   M          C PDAV+Y T+I  LC +G 
Sbjct: 156 PPTTFTFGVAARALCRLGRADEALALLRGMARHG------CVPDAVLYQTVIHALCDQGG 209

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V +A  LL +M       DV T++ V+RG C      EA RL   MM +G  P V+T+  
Sbjct: 210 VTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 269

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+  + +EA  +L  + ++    N  ++NT++ G    G++  A EL+ +M   G
Sbjct: 270 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ +  +YSIL++G CK   I  A+ L  EM  KG  P VVTY  +     +    +   
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L +EM   G+  ++  Y   I  LCK+G + EA+ L + +R   C  DI SY+ +I  L
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C + +++ A  +F +L    ++A+ +TYN +IHAL  DG+   A  L  +M   G + D 
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDV 505

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           V++N L+    ++    + + LL  M E+ 
Sbjct: 506 VSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 208/439 (47%), Gaps = 45/439 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL   +   GC P+ + Y T+I+ LC  G    A  L  EM+       + C  D  
Sbjct: 177 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL------MGCAADVN 230

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G+C  G V +A  L+ +M  K   P V+TY  +++G C    ++EA+     M
Sbjct: 231 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AM 286

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV F+ ++      GK+ EA++L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 287 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 346

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN---------------------------- 213
             A  L   ME  G   NV +Y+I+++ +CKN                            
Sbjct: 347 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406

Query: 214 -------KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                    ++ A+ L  EM S+G  P + +YNT+   L    Q+E A  +F+ +   GV
Sbjct: 407 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+   Y T I  L ++G   +A+ L + + +  C LD+ SY+ LI  +CK G +  +  
Sbjct: 467 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    +  + V+YNI+I  LC + ++  A +L   M  +G+APD V +NTL+ G  
Sbjct: 527 LLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLC 586

Query: 387 RNNETSKVVELLHRMDERN 405
           +       + LL ++   N
Sbjct: 587 KMGWMHAALNLLEKLHNEN 605



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 29/310 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           EA  L+  +   GC+P+  TYS L++GLC+ G    A+ L  EM        VV      
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 56  ---CKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              CK                     ++  Y  +I  LCK+G +D+A  L+ +M+ +  N
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD+ +YN++I   C      EA+ +F  ++++GV  N +T++ I+  L ++G+ ++A +L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI  G   +   YN L+   C  G V+R+  L   M   G K N  SY+ILI+  CK
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + +  AL L  +ML++G+ P +VTYNTL  GL ++  +  A  L +++    V  D   
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612

Query: 273 YRTFIDGLCK 282
           Y   I   CK
Sbjct: 613 YNILISWHCK 622



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 4/276 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P   TF V    LC+ G+ +EA  LL  M + G  P+A +Y T++   C  G V  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M  MGC  +V ++  ++ G C    +  A  L   M++KG  P V+TY  L  GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             + Q + A  +   +    V      + T I G    G + EA EL+ T+ +  C+ D 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS L+ GLCK GR+  A  L   + +     +VVTY I++H+ C +G  D    L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M AKG+  +   +N ++    ++    + + L+  M
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 7/314 (2%)

Query: 72  KEGFVDKAKELLLQMK---DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            +G + +A+   L  +      + P   T+    R  C    ++EA  L   M   G  P
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           + V +  ++  LC  G + EA+ LL  M+ +G   +   ++ ++ G C  GRV  A  L 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M + GC   V +Y  L+ G C+ ++ + A +    ML +  +  VV +NT+  G    
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAE 308

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++  A +L++ M   G   D   Y   + GLCK G I  A+ L R +       ++ +Y
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + ++   CK+G       L   +    L  +   YN MI+ALC DG+MD+A  L  +M +
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428

Query: 369 KGVAPDCVAFNTLM 382
           +G  PD  ++NT++
Sbjct: 429 QGCNPDICSYNTII 442



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 1/154 (0%)

Query: 253 RAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           R F L+  M  R  V   T+ +      LC+ G   EAL L R +    C  D   Y  +
Sbjct: 141 RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           I  LC  G +  A  L + +      ADV T++ ++  +C  G++ +A  L   M  KG 
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            P  + +  L+ G  R  +  +   +L R+ E N
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 294


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 201/390 (51%), Gaps = 25/390 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  G +PN  TY+ L++G C+      A+ L++E++           P+AV
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG------LNPNAV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+TT+IDG CK     +AK + L+M    + P V  YNS++ G   + ++ EA  L+ EM
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  T S+++  LC  G+M  A + L+ + + GV  NA  YN L+D +C  G +
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M  +G + NV SYS LI+G+ K  +++ A+++Y+EM++KGI+P VVTY  L
Sbjct: 413 EEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTAL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ AF+L  EM  +G++ +       +DGLC+   + EA+        LKC
Sbjct: 473 IHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKC 532

Query: 302 ELDIRS------------------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             DI S                  Y  LI GL   G+   A +LF  + +  +I D  TY
Sbjct: 533 S-DIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            ++I   C  G +  A  L+ DM   GV P
Sbjct: 592 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 207/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +L+     P +   + +++GL +      A  LF+EM+      G+V  P  V
Sbjct: 137 EALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEML----RRGLV--PSVV 187

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+    +G V KA+E+  QM  + I+P+VVTY ++I   C      +A+RLF  M
Sbjct: 188 TYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAM 247

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+QPN  T++V+M   C+   +  A  L + +++ G+ PNA ++ TL+DGFC   R 
Sbjct: 248 KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRF 307

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK +F+ M   G    V  Y+ L++G  ++   + AL+LY EM   G+ P   T + +
Sbjct: 308 SEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIV 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q+  A +    +Q  GV  +  AY   ID  C+ G + EAL     +  +  
Sbjct: 368 VRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGI 427

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ SYS LIDG  K G+++IA  ++  +    +  +VVTY  +IH    +G +D A  
Sbjct: 428 EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 487

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +M   G++P+ +  + L+ G  R N   + V  +
Sbjct: 488 LHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFV 524



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 169/339 (49%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++DGL K      A EL  +M  + + P VVTYN++I    +     +A+ ++ +M+ Q
Sbjct: 156 AVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQ 215

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNVVT++ ++  LC+ G + +A +L + M + G++PN + YN LM G C    VN A
Sbjct: 216 QIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSA 275

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L+  +   G   N   ++ LI+G+CK K    A  ++ EM   G+ PTV  YN+L  G
Sbjct: 276 VVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDG 335

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F     + A  L+ EM R G+  D +     + GLC  G +  A    + ++     L+
Sbjct: 336 AFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLN 395

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LID  C+ G L+ A      +    +  +VV+Y+ +I      GKM  A  ++ 
Sbjct: 396 AAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYT 455

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M AKG+ P+ V +  L+ G  +N        L   M E
Sbjct: 456 EMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIE 494



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 27/240 (11%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N   Y+ LI+  CR G+   AL     M     E G+  +P+ V Y+++IDG  K 
Sbjct: 391 GVNLNAAAYNALIDEYCRIGNLEEALATCTRMT----EVGI--EPNVVSYSSLIDGHSKR 444

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +  A  +  +M  K I P+VVTY ++I G       + A RL  EM++ G+ PN +T 
Sbjct: 445 GKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITV 504

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVR-------------------PNAFVYNTLMDG 174
           SV++D LC+  +++EA + +  M   G++                   PN+ +Y TL+ G
Sbjct: 505 SVLVDGLCRENRVQEAVRFV--MEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYG 562

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
             L G+   A +LF  M   G   + F+Y++LI G C    +  A+ LY++M+  G+KPT
Sbjct: 563 LYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 127/276 (46%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +   + ++D L K  +   A +L + M++ G+ P+   YNTL++     G V +A+E+
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M +     NV +Y+ +I   C+   I  A  L+  M   G++P   TYN L  G  +
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              V  A  L+ E+ + G+  +   + T IDG CK     EA  +F  +        +  
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ L+DG  +SG  + A  L+  + R  L  D  T +I++  LC  G+M  A      ++
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             GV  +  A+N L+    R     + +    RM E
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTE 424



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 23/181 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A++T++ A G EPNV+TY+ LI+G  + G    A  L +EMI    E G+   P+A+ 
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI----ENGI--SPNAIT 503

Query: 63  YTTIIDGLCKEGFVDKAKELLLQ-----------------MKDKNINPDVVTYNSVIRGF 105
            + ++DGLC+E  V +A   +++                 ++++ + P+ V Y ++I G 
Sbjct: 504 VSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGL 563

Query: 106 CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                  EA +LF  M   G+ P+  T+++++   C  G +  A  L   M++IGV+P  
Sbjct: 564 YLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTR 623

Query: 166 F 166
           +
Sbjct: 624 Y 624


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 6/339 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV TY+ LI    R+     A  LF+EM+    E      PD  IYT+II+  CK G + 
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFGNMK 314

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L  +M ++ + P+  TY ++I G C A +   A+ +  +M  +GV  N V F+ +M
Sbjct: 315 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 374

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  CK G ++EA +L  +M Q G   +AF  N +  GFC + R   AK L ++ME  G  
Sbjct: 375 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 434

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV S+SILI+ YCK +    A  L+  M  KG  P+VVTYN       +  ++E A+KL
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            +EMQ  G+  DT+ Y + IDG   +G +  ALELF  +  L    ++ +Y+ +I GL K
Sbjct: 495 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 554

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            GR   A++L+  + +  ++ D   Y+ +I +L   G +
Sbjct: 555 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 200/382 (52%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A AL  +L   G +P+VITY+TL+NG       +  +N    ++  N     V   + 
Sbjct: 209 VRAKALMDELVCKGFKPSVITYNTLLNGYIEI-KDVGGVNEILSLMEKN-----VVDYNV 262

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I+   +   +++A++L  +M  K I PDV  Y S+I   C   +   A  LF E
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + PN  T+  +++  CK G+M+ A  ++  M   GV  N  ++NTLMDG+C  G 
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+  G + + F+ +I+ +G+C++   E A  L   M  +G+ P VV+++ 
Sbjct: 383 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 442

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +      A +LF  M++ G A     Y  FI+  CK G + EA +L   ++   
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LIDG   SG +  A ELF+ +P+  L  +VVTY ++I  L  DG+ D+A 
Sbjct: 503 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAF 562

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+ +M  +G+ PD   +++L+
Sbjct: 563 KLYDEMNKEGIVPDDGIYSSLI 584



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 190/376 (50%), Gaps = 6/376 (1%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            L R+G+  + +    +M++   E  V        +T ++DGLCK+G V +AK L+ ++ 
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCS------WTAVVDGLCKKGEVVRAKALMDELV 219

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
            K   P V+TYN+++ G+    D      +   M    V  NV T++++++   ++ K+E
Sbjct: 220 CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIE 279

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA +L + M++ G+ P+ ++Y ++++  C  G + RA  LF  M       N ++Y  LI
Sbjct: 280 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CK  E++ A  + ++M SKG+    V +NTL  G  +   ++ A +L + MQ+ G  
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D +       G C++    EA  L  T+       ++ S+S LID  CK      A  L
Sbjct: 400 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 459

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  + +      VVTYN  I   C  GKM++A+ L  +M+ +G+ PD   + +L+ G   
Sbjct: 460 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 519

Query: 388 NNETSKVVELLHRMDE 403
           +    + +EL + M +
Sbjct: 520 SGNVDRALELFNEMPQ 535



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 6/289 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++      PN  TY  LING C+ G    A    E M+N     GV    + VI
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA----EMMVNDMQSKGVDV--NRVI 369

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T++DG CK+G +D+A  L   M+ K    D  T N +  GFC +N   EAKRL + M 
Sbjct: 370 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 429

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV PNVV+FS+++D  CK     EA +L ++M + G  P+   YN  ++ +C  G++ 
Sbjct: 430 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 489

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M+  G   + ++Y+ LI+G   +  ++ AL L++EM   G+   VVTY  + 
Sbjct: 490 EAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVII 549

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            GL +  + + AFKL+DEM + G+  D   Y + I  L K G +V  LE
Sbjct: 550 SGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 35/320 (10%)

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+D G++  V +++ ++D LCK G++  A  L++ ++  G +P+   YNTL++G+    
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V    E+   ME     +NV +Y++LI  Y ++ +IE A  L+ EML KGI+P V  Y 
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301

Query: 240 TLFIGLFEIHQVERAFKLFDEM-----------------------------------QRH 264
           ++     +   ++RAF LFDEM                                   Q  
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 361

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  +   + T +DG CK G I EAL L   ++    E+D  + + +  G C+S R + A
Sbjct: 362 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 421

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L  ++    +  +VV+++I+I   C +    +A  LF  ME KG AP  V +N  +  
Sbjct: 422 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 481

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  +  +L++ M ER
Sbjct: 482 YCKKGKMEEAYKLINEMQER 501



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 39/199 (19%)

Query: 245 LFEIHQVERAF----KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           LF ++   R F    ++FD  ++ G   D  +   F+  L ++G +   +E  R +    
Sbjct: 128 LFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSG 187

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL----------------------------- 331
            E+ + S++ ++DGLCK G +  A  L   L                             
Sbjct: 188 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 247

Query: 332 ------PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                  + V+  +V TY ++I       K+++A  LF +M  KG+ PD   + +++   
Sbjct: 248 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307

Query: 386 IRNNETSKVVELLHRMDER 404
            +     +   L   M ER
Sbjct: 308 CKFGNMKRAFVLFDEMTER 326


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 194/384 (50%), Gaps = 8/384 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP+V+TY+TL+ GLC+ G    A +LF  M  G G       P  V YTT+ID  CK   
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSM-EGAG-----ITPSDVTYTTLIDVFCKMCQ 126

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            + A  LL  M  +  +P V +Y S+I G C     ++A +LF EM   G +P+ VT++ 
Sbjct: 127 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 186

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   ++ EA  LL +M++   +P+   +  L++G C T R+  A  LF  M   G
Sbjct: 187 LIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 246

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  ++ ++++L++  C  +++  ALS+            V+ Y  +F  L      +RA 
Sbjct: 247 CAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +M R GVA +   Y  F  GL      + A   FR +     E D+ +Y+ L+DG 
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK+ RL +A ++   + +  L  ++VTYN ++   C  GK++   +L   M ++G  PD 
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 424

Query: 376 VAFNTLMLGCIRNNETSKVVELLH 399
             ++TL+ G  R  +       L+
Sbjct: 425 ATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F   CKP+A+ Y  ++  LC+ G +DKA   + +M  + + PDV TYN VI   C A   
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A    IE  +   +P+VVT++ ++  LCKNG++ +A  L   M   G+ P+   Y TL
Sbjct: 62  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D FC   +   A  L   M S  C   V+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  GL    ++  A  L   M  +    D   +   I+GLC    I EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +    C  D+ +++ L+  LC   +L+ A  +  + P       V+ Y  +   L 
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 295

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                D+A  L   M  +GVAP+ V +     G     E  +      RM E+
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 348



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 191/423 (45%), Gaps = 43/423 (10%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+PN ++Y  L+  LCRTG    A +   EM            PD   Y  +ID LCK  
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK------LVPDVFTYNVVIDTLCKAR 59

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            + +A E    M +    PDVVTYN+++ G C      +A  LF  M   G+ P+ VT++
Sbjct: 60  RISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYT 115

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++D  CK  + E A  LL+LM      P  + Y ++++G C   +V++A +LF  M+  
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA 175

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GCK +  +Y+ LI+G C  + +  A  L + M+    +P  +T+  L  GL    +++ A
Sbjct: 176 GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE-----------------LFRTL- 296
           F LF  M + G A D   +   +  LC    +  AL                  +FR L 
Sbjct: 236 FVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELG 295

Query: 297 ---------RILK------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
                    R+L+         ++ +Y+    GL        A+  F  +    +  D+V
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            YN+++   C   ++D A  +   M+  G+ P+ V +NTL+    R  +   + ELLH M
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415

Query: 402 DER 404
             R
Sbjct: 416 VSR 418



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 140/270 (51%), Gaps = 5/270 (1%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  Q  +PN +++  ++  LC+ GK+++A   +  M +  + P+ F YN ++D  C   R
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++RA E F +M     + +V +Y+ L+ G CKN  +  A SL+  M   GI P+ VTY T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     ++ Q E A+ L   M     +   ++Y + I+GLCKN  + +A +LF  +++  
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D  +Y+ LI GLC   RL  A +L   +       D +T+  +I  LC   ++ +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG-CIRNN 389
            LF  M  +G APD V    L+   CIR  
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRK 266



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 143/297 (48%), Gaps = 39/297 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  GC+P+ +TY+TLI+GLC       A +L   M+  + +      PD +
Sbjct: 164 QAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQ------PDKI 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN----------------SVIRGF 105
            +T +I+GLC    + +A  L   M  +   PD+VT+                 SV+R +
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY 277

Query: 106 CYANDS-----------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
               ++                 + A RL  +M  +GV PNVVT++     L    +   
Sbjct: 278 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMR 337

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A +    M++ G+ P+   YN L+DGFC   R++ A+++   M+  G   N+ +Y+ L+ 
Sbjct: 338 AYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVG 397

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            +C+  ++E    L   M+S+G +P V T++TL  GLF + QV+ A+   +     G
Sbjct: 398 HHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 6/125 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A   F ++   G EP+++ Y+ L++G C+       L++ E+M+    + G+   P+ 
Sbjct: 336 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR----LDMAEKMVRYMDQSGL--PPNI 389

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++   C++G V+   ELL  M  +   PDV T+++++ G       + A      
Sbjct: 390 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNL 449

Query: 121 MMDQG 125
            M QG
Sbjct: 450 AMSQG 454


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 6/339 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV TY+ LI    R+     A  LF+EM+    E      PD  IYT+II+  CK G + 
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFGNMK 310

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L  +M ++ + P+  TY ++I G C A +   A+ +  +M  +GV  N V F+ +M
Sbjct: 311 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 370

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  CK G ++EA +L  +M Q G   +AF  N +  GFC + R   AK L ++ME  G  
Sbjct: 371 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 430

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV S+SILI+ YCK +    A  L+  M  KG  P+VVTYN       +  ++E A+KL
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            +EMQ  G+  DT+ Y + IDG   +G +  ALELF  +  L    ++ +Y+ +I GL K
Sbjct: 491 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 550

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            GR   A++L+  + +  ++ D   Y+ +I +L   G +
Sbjct: 551 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 200/382 (52%), Gaps = 6/382 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A AL  +L   G +P+VITY+TL+NG       +  +N    ++  N     V   + 
Sbjct: 205 VRAKALMDELVCKGFKPSVITYNTLLNGYIEI-KDVGGVNEILSLMEKN-----VVDYNV 258

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I+   +   +++A++L  +M  K I PDV  Y S+I   C   +   A  LF E
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + PN  T+  +++  CK G+M+ A  ++  M   GV  N  ++NTLMDG+C  G 
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+  G + + F+ +I+ +G+C++   E A  L   M  +G+ P VV+++ 
Sbjct: 379 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +      A +LF  M++ G A     Y  FI+  CK G + EA +L   ++   
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LIDG   SG +  A ELF+ +P+  L  +VVTY ++I  L  DG+ D+A 
Sbjct: 499 LMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAF 558

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+ +M  +G+ PD   +++L+
Sbjct: 559 KLYDEMNKEGIVPDDGIYSSLI 580



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 190/376 (50%), Gaps = 6/376 (1%)

Query: 28  GLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
            L R+G+  + +    +M++   E  V        +T ++DGLCK+G V +AK L+ ++ 
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCS------WTAVVDGLCKKGEVVRAKALMDELV 215

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
            K   P V+TYN+++ G+    D      +   M    V  NV T++++++   ++ K+E
Sbjct: 216 CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIE 275

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA +L + M++ G+ P+ ++Y ++++  C  G + RA  LF  M       N ++Y  LI
Sbjct: 276 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CK  E++ A  + ++M SKG+    V +NTL  G  +   ++ A +L + MQ+ G  
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D +       G C++    EA  L  T+       ++ S+S LID  CK      A  L
Sbjct: 396 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 455

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F  + +      VVTYN  I   C  GKM++A+ L  +M+ +G+ PD   + +L+ G   
Sbjct: 456 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 515

Query: 388 NNETSKVVELLHRMDE 403
           +    + +EL + M +
Sbjct: 516 SGNVDRALELFNEMPQ 531



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 6/289 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++      PN  TY  LING C+ G    A    E M+N     GV    + VI
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA----EMMVNDMQSKGVDV--NRVI 365

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T++DG CK+G +D+A  L   M+ K    D  T N +  GFC +N   EAKRL + M 
Sbjct: 366 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 425

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV PNVV+FS+++D  CK     EA +L ++M + G  P+   YN  ++ +C  G++ 
Sbjct: 426 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 485

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   M+  G   + ++Y+ LI+G   +  ++ AL L++EM   G+   VVTY  + 
Sbjct: 486 EAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVII 545

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            GL +  + + AFKL+DEM + G+  D   Y + I  L K G +V  LE
Sbjct: 546 SGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 35/320 (10%)

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+D G++  V +++ ++D LCK G++  A  L++ ++  G +P+   YNTL++G+    
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V    E+   ME     +NV +Y++LI  Y ++ +IE A  L+ EML KGI+P V  Y 
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297

Query: 240 TLFIGLFEIHQVERAFKLFDEM-----------------------------------QRH 264
           ++     +   ++RAF LFDEM                                   Q  
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSK 357

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  +   + T +DG CK G I EAL L   ++    E+D  + + +  G C+S R + A
Sbjct: 358 GVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEA 417

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L  ++    +  +VV+++I+I   C +    +A  LF  ME KG AP  V +N  +  
Sbjct: 418 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 477

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  +  +L++ M ER
Sbjct: 478 YCKKGKMEEAYKLINEMQER 497



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 39/199 (19%)

Query: 245 LFEIHQVERAF----KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           LF ++   R F    ++FD  ++ G   D  +   F+  L ++G +   +E  R +    
Sbjct: 124 LFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSG 183

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSL----------------------------- 331
            E+ + S++ ++DGLCK G +  A  L   L                             
Sbjct: 184 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 243

Query: 332 ------PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
                  + V+  +V TY ++I       K+++A  LF +M  KG+ PD   + +++   
Sbjct: 244 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303

Query: 386 IRNNETSKVVELLHRMDER 404
            +     +   L   M ER
Sbjct: 304 CKFGNMKRAFVLFDEMTER 322


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 204/387 (52%), Gaps = 15/387 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PN +T++T I   C+ G    A+ L ++M      +G  C PD VIY+T+I+G  ++G
Sbjct: 38  CPPNEVTFATQIRSFCQNGLLDRAVQLLDQM----PRYG--CTPDVVIYSTLINGFSEQG 91

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            VD+A +LL  M  K   P+ V YN+ ++G C A    +   L  EM+ +G  PN  TFS
Sbjct: 92  HVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFS 148

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++  LC+N  ++ A ++LE M + G  P+   YN +++     GRV+ A  L   + SM
Sbjct: 149 MLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSM 205

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            CK +   ++ ++ G+C+ +    A  L ++M         +T+N L   L +   V  A
Sbjct: 206 VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYA 265

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            ++F++M R+    D   Y + ++G  + G +  A++LFR+   + C+ DI SY+ ++ G
Sbjct: 266 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRS---MPCKPDIFSYNAVLKG 322

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC++ R + A EL   +       + VT+NI+I++LC  G +D+A ++   M   G  PD
Sbjct: 323 LCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 382

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
              +N L+ G          ++LL  M
Sbjct: 383 IFTYNALINGFSEQGRLDDALKLLSTM 409



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 195/399 (48%), Gaps = 18/399 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++  +GC P+V+ YSTLING    GH   AL+L   M+         CKP+ V 
Sbjct: 61  AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---------CKPNTVC 111

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   + GLC     +   EL+ +M  K  +P+  T++ +I   C  N  + A  +  +M 
Sbjct: 112 YNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQME 171

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +P+ V +++I++ L + G++++A +LL  M+    +P+A  +N ++ GFC   R +
Sbjct: 172 KYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWH 228

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M    C     +++ILI+  C+N  +  A  ++ +M      P +VTY++L 
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 288

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +    C 
Sbjct: 289 NGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCP 345

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  L
Sbjct: 346 PNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL 405

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              M  K   PD +++N+ + G  R        EL+  M
Sbjct: 406 LSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEM 441



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PN  T+S LI+ LC+      A+ + E+M     ++G  C+PD V Y  
Sbjct: 131 LMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM----EKYG--CEPDTVNYNI 184

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           II+ L + G VD A  LL  M  K   PD + +N+V++GFC A   ++A  L  +M    
Sbjct: 185 IINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDD 241

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
                +TF++++D LC+NG +  A+Q+ E M +    P+   Y++L++GF   G V  A 
Sbjct: 242 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 301

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF    SM CK ++FSY+ ++ G C+    E A  L +EM+ K   P  VT+N L   L
Sbjct: 302 QLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 358

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V+RA ++ ++M  +G   D + Y   I+G  + G + +AL+L  T   + C+ D 
Sbjct: 359 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST---MSCKPDA 415

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            SY+  + GLC++ R + A EL   + R     + VT+    H L
Sbjct: 416 ISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 460



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 6/311 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PD  TYN+V++G C A    EA+ L  EM+     PN VTF+  +   C+NG ++ A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           QLL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N   Y+  + G 
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 119

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C  +  E    L +EM+ KG  P   T++ L   L + + V+ A ++ ++M+++G   DT
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+ L + G + +AL   R L  + C+ D   ++ ++ G C++ R   A EL   
Sbjct: 180 VNYNIIINSLSERGRVDDAL---RLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQ 236

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + R       +T+NI+I  LC +G ++ A  +F  M      PD V +++L+ G      
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296

Query: 391 TSKVVELLHRM 401
               ++L   M
Sbjct: 297 VEVAIQLFRSM 307



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 130/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L  ++    C    +T++ LI+ LC+ G    A  +FE+M          C PD V
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR------YRCTPDIV 282

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++++G  ++G V+ A +L   M  K   PD+ +YN+V++G C A    +A  L  EM
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN VTF+++++ LC+ G ++ A ++LE M   G  P+ F YN L++GF   GR+
Sbjct: 340 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 399

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P  VT+
Sbjct: 400 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P   TYNT+  GL    + E A +L  EM R+    +   + T I   C+NG +  A+
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           +L   +    C  D+  YS LI+G  + G +  A +L +++   +   + V YN  +  L
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGL 119

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           C   + +   +L  +M  KG +P+   F+ L+    +NN     VE+L +M++
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 172


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 228/474 (48%), Gaps = 77/474 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   G  P + + S L+  L + G   VA+ +F++++      G+V  PD  
Sbjct: 174 HALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGT----GIV--PDVY 227

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + + +++  C+ G VD A E+L +M  + + P+VVTYN ++ G+    D    +R+   M
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL---------------------------- 153
            ++GV  NVVT +++M   CK GKM+EA +LL                            
Sbjct: 288 SERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGR 347

Query: 154 --------ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                   + M+++G++ N  + NTL+ G+C  G+V  A+ +FV M     K + +SY+ 
Sbjct: 348 MEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNT 407

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL-------------------- 245
           L++GYC+  ++  A  L  EML  GI PTVVTYNT+  GL                    
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467

Query: 246 ---------------FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
                          F++   +RA  L+ E+   G    T A+ T I GLCK G ++EA 
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAG 527

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            +F  ++ L    D  +Y  L DG CK+G ++ A+++   + R  + A +  YN +I  L
Sbjct: 528 AVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGL 587

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
               K++   DL ++M+ +G++P+ V + TL+ G     +  K   L   M ER
Sbjct: 588 FKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIER 641



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%), Gaps = 5/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   NV+T + L+ G C+ G    A  L  E+     E  VV   D  +Y  ++DG C+ 
Sbjct: 291 GVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV--EEDELLVV---DERVYGVLVDGYCQM 345

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G ++ A  +  +M    +  ++V  N++I+G+C      EA+R+F+ M+D  ++P+  ++
Sbjct: 346 GRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY 405

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C+ GK+ +A  L E M+  G+ P    YNT++ G    G  + A  L+  M  
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  S   +++ + K  + + A+ L+ E+L +G   + V +NT+  GL ++ ++  
Sbjct: 466 RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLME 525

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +FD M+  G++ D   YRT  DG CKNG + EA ++   +        I  Y+ LID
Sbjct: 526 AGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLID 585

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K  +L    +L   +    L  +VVTY  +I   C + K+DKA  L+ +M  +G  P
Sbjct: 586 GLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTP 645

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + V  + ++    R++  S+   +L +M
Sbjct: 646 NVVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 41/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +  +  +P+  +Y+TL++G CR G    A  L EEM+ G+G       P  V
Sbjct: 385 EAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML-GDG-----ITPTVV 438

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GL   G  D A  L   M ++ + P+ ++  +++  F    DS+ A  L+ E+
Sbjct: 439 TYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + V F+ ++  LCK GK+ EA  + + M ++G+ P+   Y TL DG+C  G V
Sbjct: 499 LGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   ME      ++  Y+ LI+G  K +++     L  EM ++G+ P VVTY TL
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTL 618

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL----- 296
             G  +  ++++AF L+ EM   G   +       +  L ++  I EA  +   +     
Sbjct: 619 ISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678

Query: 297 ---------RILKCELDIRS---------------------YSCLIDGLCKSGRLKIAWE 326
                    +++K +L + +                     Y+  IDGLCKSG+L  A  
Sbjct: 679 LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARS 738

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   L     + D  TY  +IHA    G +D+A  L  +M  KG+ P+   +N L+ G  
Sbjct: 739 VLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLC 798

Query: 387 RNNETSKVVELLHRMDER 404
           +     +   L +++ ++
Sbjct: 799 KLGNIDRAQRLFYKLYQK 816



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 47/375 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA A+F ++K  G  P+ ITY TL +G C+ G+   A       I G  E   +     
Sbjct: 524 MEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ-----IKGVMERQAM-SASI 577

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y ++IDGL K   ++   +LL++M+ + ++P+VVTY ++I G+C     ++A  L+ E
Sbjct: 578 EMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFE 637

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PNVV  S I+  L ++ ++ EA+ +L+ M+   +     V+N   D       
Sbjct: 638 MIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCSDKLVKNDL 694

Query: 181 VNRAKELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              A+++  S++         N   Y+I I+G CK+ +++ A S+ S ++S+G  P   T
Sbjct: 695 TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL         V+ AFKL DEM   G+  +   Y   I+GLCK G I  A  L     
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRL----- 809

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                                         F+ L +  L+ + VTYNI+I   C  G +D
Sbjct: 810 ------------------------------FYKLYQKGLVPNAVTYNILIGCYCRIGDLD 839

Query: 358 KAHDLFLDMEAKGVA 372
           KA  L   M  +G++
Sbjct: 840 KASRLREKMTEEGIS 854



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 196/406 (48%), Gaps = 14/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+  +   G  PN I+  T+++   + G +  A+ L++E++ G G          V
Sbjct: 455 DALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEIL-GRG-----FTKSTV 508

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I GLCK G + +A  +  +MK+  ++PD +TY ++  G+C   +  EA ++   M
Sbjct: 509 AFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q +  ++  ++ ++D L K  K+ + + LL  M   G+ PN   Y TL+ G+C   ++
Sbjct: 569 ERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKL 628

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A  L+  M   G   NV   S +++   ++  I  A  +  +ML   I   +  +N  
Sbjct: 629 DKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNKC 685

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA---ADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
              L +      A K+ D + +  +    ++   Y   IDGLCK+G + EA  +   L  
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  +Y  LI     SG +  A++L   +    LI ++  YN +I+ LC  G +D+
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCI-RNNETSKVVELLHRMDE 403
           A  LF  +  KG+ P+ V +N +++GC  R  +  K   L  +M E
Sbjct: 806 AQRLFYKLYQKGLVPNAVTYN-ILIGCYCRIGDLDKASRLREKMTE 850



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 6/327 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  ++    + G    A  +  +M      P + + + ++       +   A  +F ++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+V   S++++  C+ G+++ A ++LE M++ G+ PN   YN L++G+   G  
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV---TY 238
              + +   M   G   NV + ++L+ GYCK  +++ A  L  E+    +   VV    Y
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDEL--LVVDERVY 335

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L  G  ++ ++E A ++ DEM R G+  +     T I G CK G + EA  +F  +  
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D  SY+ L+DG C+ G++  A+ L   +    +   VVTYN +I  L   G  D 
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           A  L+  M  +GV P+ ++  T ML C
Sbjct: 456 ALHLWHLMVERGVTPNEISCCT-MLDC 481



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 150/308 (48%), Gaps = 1/308 (0%)

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           ++ +++ F     +  A  +F EM   G  P + + S ++ +L + G+   A  + + ++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+ P+ ++ + +++  C  GRV+ A E+   M   G + NV +Y+ L+NGY    + E
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
           G   +   M  +G+   VVT   L  G  +  +++ A KL  E++    +  D   Y   
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVL 338

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           +DG C+ G + +A+ +   +  +  ++++   + LI G CK G++  A  +F  +    L
Sbjct: 339 VDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL 398

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D  +YN ++   C +GK+ KA  L  +M   G+ P  V +NT++ G +        + 
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALH 458

Query: 397 LLHRMDER 404
           L H M ER
Sbjct: 459 LWHLMVER 466


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 207/400 (51%), Gaps = 15/400 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++    C PN +T++T I   C+ G    A+ L E+M     ++G  C PD +
Sbjct: 234 QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM----PKYG--CTPDVI 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+++G  + G VD+A +LL  M      P+ V YN+ ++G C A    E   L  EM
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEM 344

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TFS +++ LC+N  +E A ++LE M + G  P+   YNT++  F    R 
Sbjct: 345 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 404

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   ++SM CK +  S++ ++   CK K    A+ L ++ML K  +   +T+N L
Sbjct: 405 DDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  QV+ A ++F+ M ++    D   Y + I+G  + G    A +LFR++    C
Sbjct: 462 IDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PC 518

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+  + GLC + R   A EL   +     + + VT+NI+I +LC  G +++A D
Sbjct: 519 RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAID 578

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++  M   G+ PD   +N L+ G          ++ L  M
Sbjct: 579 VYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 618



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 197/415 (47%), Gaps = 49/415 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   LKA G   + ++++TL+ G CR G    +L   E ++      G     + V
Sbjct: 134 DAERVLEALKASGAA-DAVSHNTLVAGYCRDG----SLGDAERVVEAARASGTA---NVV 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDG C+ G +  A  L+  M    + PD  TYN+V++G C A    +A+ L  EM
Sbjct: 186 TYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELMREM 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------ 175
           +     PN VTF+  +   C+NG ++ A +LLE M + G  P+  +Y+TL++GF      
Sbjct: 243 IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302

Query: 176 --------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                                     C+ GR     EL   M    C  N  ++S LIN 
Sbjct: 303 DEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C+N+ +E A+ +  +M   G  P VV+YNT+     +  + + A KL   M       D
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPD 419

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T ++   +  LCK     +A+EL   +    C ++  +++ LID LC++G++K A E+F 
Sbjct: 420 TISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFE 479

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +P+   + D+VTY+ +I+     G  + A DLF  M  +    D  ++N  + G
Sbjct: 480 LMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKG 531



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 183/342 (53%), Gaps = 15/342 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++    C PN  T+STLIN LC+      A+ + E+M     ++G +  PD V
Sbjct: 336 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM----QKYGYM--PDVV 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII     +   D A +LL  M  K   PD +++N+V++  C A    +A  L  +M
Sbjct: 390 SYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKM 446

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + N +TF++++D LC+NG++++A ++ ELM +    P+   Y++L++GF   G  
Sbjct: 447 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 506

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF    SM C+ ++FSY+  + G C     + A  L ++M+++   P  VT+N L
Sbjct: 507 EMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 563

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V RA  ++++M ++G+  D + Y   I+G  + G + +AL+   T   + C
Sbjct: 564 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLST---MPC 620

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           E D  SY+ ++ GLC++ R K A +L   + R     + VT+
Sbjct: 621 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 35/403 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
            A  L  ++  +GC P+VI YSTL+NG    G    AL L   M                
Sbjct: 269 RAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGL 328

Query: 46  -INGNGE-FGVV--------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
            I G  E  G +        C P+   ++T+I+ LC+   V+ A E+L QM+     PDV
Sbjct: 329 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 388

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V+YN++I  F     +++A +L   M+    +P+ ++F+ ++  LCK  +  +A +L+  
Sbjct: 389 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 445

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++   R N   +N L+D  C  G+V  A E+F  M    C  ++ +YS LING+ +   
Sbjct: 446 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 505

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E A  L+  M  +     + +YN    GL    + + A +L  +M       +   +  
Sbjct: 506 DEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNI 562

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I  LC+ G +  A++++  +       DI +Y+ LI+G  + GRL  A +   ++P   
Sbjct: 563 LISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP--- 619

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
              D ++YN ++  LC   +   A  L  +M  K   P+ V F
Sbjct: 620 CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%), Gaps = 8/276 (2%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P V++ ++++ +LC   ++ +A ++LE +   G   +A  +NTL+ G+C  G +  A+ +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
             +  + G   NV +Y+ LI+GYC++  +  AL L + M    + P   TYNT+  GL  
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             Q E+A +L  EM R+    +   + T I   C+NG +  A+EL   +    C  D+  
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           YS L++G  + GR+  A +L +++   +   + V YN  +  LC  G+ ++  +L  +M 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            K   P+   F+TL+    +N      VE+L +M +
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 7/400 (1%)

Query: 3   AAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A  LF ++ + +G   +  +Y+ LI GLC  G    A  +F +M  G       C+P   
Sbjct: 144 ACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRG------WCRPGVH 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGLCK   V +A+ LL +M +K + P+VVTYN++I G C     ++  +L  +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q   P+  T++ ++  LCK+GK+   +++L   I  GV      YN L++G+C  G +
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M+       V +++ +I+G+C   ++  A++  ++M   G+ P  VT+N+L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + + + A +L D M+ +GV  D   Y  FID LC  G + EA  LF  L +   
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +     Y+ L+ G C+ G +  A+ L   +     + DV TYN +I  LC   ++D+A D
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M+ +G+ P    FN L+   + + + +   ++  +M
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 192/396 (48%), Gaps = 5/396 (1%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  P+  TY+ L+ GLCR G    A  LF +M    G     C  D   YT +I 
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWG----ACY-DRYSYTILIK 169

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLC  G +D A  +  +M      P V TY  ++ G C      EA+ L  EM+++GV P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++ ++  LC+ G+ ++ ++LLE M      P+ + Y  ++ G C  G+V    ++ 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
                 G    V +Y+ LINGYCK  +++ AL +   M    + P V T+N +  G    
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +V +A     +M   G++ +T  + + I G C  G    AL L   +       D ++Y
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           +  ID LC  G+L+ A  LF  LP   + A  V Y  ++H  C  G +D A  L   M +
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   PD   +NTL+ G  +     + ++LL +M ++
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ 505



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 182/373 (48%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F K+    C P V TY+ L++GLC+      A  L  EM+N     GVV  P+ V
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK----GVV--PNVV 232

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC+EG  D   +LL +M+ +  +PD  TY  V+ G C         ++  E 
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV   V+T++ +++  CK G M+ A  +L+LM +  V P    +N ++ GFC  G+V
Sbjct: 293 IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKV 352

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A      M   G   N  +++ LI+G C   E + AL L   M   G+ P   TY   
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  Q+E A  LF  +   G+ A    Y + + G C+ G I  A  L   +    C
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LIDGLCK  RL  A +L   + +  +     T+NI+I  +  D K   A  
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 362 LFLDMEAKGVAPD 374
           ++  M + G  PD
Sbjct: 533 MYEQMISSGCKPD 545



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 201/416 (48%), Gaps = 39/416 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           EA AL  ++   G  PNV+TY+ LI GLC+ G       L E+M               +
Sbjct: 214 EAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVV 273

Query: 47  NG---NGEFGVVCKP-----------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           +G   +G+ G   K            + + Y  +I+G CK G +  A ++L  MK   +N
Sbjct: 274 HGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVN 333

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V T+N VI GFC     ++A     +M   G+ PN VTF+ ++   C  G+ + A +L
Sbjct: 334 PGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRL 393

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK-HNVFSYSILINGYC 211
           L+LM + GV P+   Y   +D  C  G++  A  LF  +   G K HNV  Y+ L++GYC
Sbjct: 394 LDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVI-YTSLVHGYC 452

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  +I+ A  L  +M S+   P V TYNTL  GL ++ +++RA  L D+M++ G+   T 
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTC 512

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI-----DGLCKSGRLKIAWE 326
            +   I  +  +    +A +++  +    C+ D ++Y+  I     +G  K   + +A  
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
             H      +  DV TYN +I A    G  +KA    + M +  + PDC  ++ L+
Sbjct: 573 EMH---EAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 190/402 (47%), Gaps = 7/402 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  +   G  PN  TY+TLIN  C+      A      M     E G+   PD   Y 
Sbjct: 76  ASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRM----REAGLA--PDTFTYN 129

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
            ++ GLC+ G +  A  L +QM  +     D  +Y  +I+G C A   ++A R+F +M  
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
              +P V T++V++D LCK  ++ EA  LL  M+  GV PN   YN L+ G C  GR + 
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDD 249

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
             +L   ME      + ++Y+ +++G CK+ ++     +  E + KG+   V+TYN L  
Sbjct: 250 VTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALIN 309

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   ++ A  +   M+R+ V      +   I G C  G + +A+     +       
Sbjct: 310 GYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSP 369

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  +++ LI G C  G  KIA  L   +    ++ D  TY I I ALC +G++++AH LF
Sbjct: 370 NTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  KG+    V + +L+ G  +  +      L+ +M   N
Sbjct: 430 SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 196/458 (42%), Gaps = 65/458 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A  T++   G  PN +T+++LI+G C  G   +AL L + M     E+GV+  PD  
Sbjct: 354 KAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLM----EEYGVL--PDRQ 407

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   ID LC EG +++A  L   +  K I    V Y S++ G+C   D + A  L  +M
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+V T++ ++D LCK  +++ A  LL+ M + G+ P    +N L+       + 
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKH 527

Query: 182 NRAKELFVSMESMGCKHNVFSYSILIN-----GYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             A +++  M S GCK +  +Y++ I+     G  K + I+ A+    EM   G+ P V 
Sbjct: 528 ADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVE 584

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC----KNGYIVEALEL 292
           TYN +     +    E+AF    +M    +  D   Y   ++ +C     + +  E +  
Sbjct: 585 TYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWK 644

Query: 293 FRTLRILK------CELD----IRSYSCLIDGLCKSGRL-KIAW---------------- 325
              +R L+      CE D    I +Y  L+ GLC   RL ++ W                
Sbjct: 645 MVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDM 704

Query: 326 ------------------ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
                             E F S+        + +  +++  LC  G    A  +F DM 
Sbjct: 705 SDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDML 764

Query: 368 AKGVAPDCVAFNTLMLGCIR-NNETSKVVELLHRMDER 404
             G   D V +  L++ C+         +E+L  MD +
Sbjct: 765 GLGYNYDEVVWK-LLIDCLHEKGHAGACLEMLSVMDAK 801



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 176/392 (44%), Gaps = 26/392 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+ L   G + + + Y++L++G C+ G    A  L E+M + N      C PD  
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN------CMPDVH 477

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDGLCK   +D+A +LL +MK + I P   T+N +I+   +     +A +++ +M
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL--MIQIGVRPNAFVYNTLMDGFCLTG 179
           +  G +P+  T+++ +      G  +E +  + +  M + GV P+   YN ++  +   G
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYC--------------KNKEIEGALSLYSE 225
              +A    V M S+    +  +YSIL+N  C              K  ++     L+ +
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQ 657

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M      P + TY  L  GL    ++E    L  +MQ + +  D       +   C    
Sbjct: 658 MCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEM 717

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             EA E FR++     +  ++S   L+ GLC SG   +A  +F  +       D V + +
Sbjct: 718 YREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKL 777

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +I  L   G      ++   M+AK     CVA
Sbjct: 778 LIDCLHEKGHAGACLEMLSVMDAK----KCVA 805



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 139/330 (42%), Gaps = 28/330 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  K+K  G EP   T++ LI  +        A  ++E+MI+        CKPD  
Sbjct: 494 RAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSG------CKPDKQ 547

Query: 62  IYTTII-----DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            YT  I     +G  KE  +D A   +++M +  + PDV TYN++I+ +  A    +A  
Sbjct: 548 TYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELC-----------KNGKMEEASQLLEL---MIQIGVR 162
             ++M+   + P+  T+S++++ +C           K  KM +   L EL   M +    
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAA 664

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P    Y  L+ G C   R+   + L + M+      +      L+  YC  +    A   
Sbjct: 665 PGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQ 724

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M  +  +P + +   L  GL +      A  +F +M   G   D   ++  ID L +
Sbjct: 725 FRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHE 784

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLI 312
            G+    LE+   +   KC    R+Y+ L+
Sbjct: 785 KGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 1/184 (0%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L+ +  ML  G  P   TYNTL     ++  +  A      M+  G+A DT+ Y   + G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 280 LCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           LC+ G +  A  LF  + R      D  SY+ LI GLC +GR+  A  +F  + RG    
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
            V TY +++  LC   ++ +A  L  +M  KGV P+ V +N L+ G  +      V +LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 399 HRMD 402
            +M+
Sbjct: 255 EKME 258


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 218/421 (51%), Gaps = 30/421 (7%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++T++      PNV T++ L++  C+ G+ I+AL+L            V  + D V Y T
Sbjct: 32  IYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLR---------NVDVEVDTVTYNT 82

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G C+ G V++A   L  M  K+   D +T N +++GFC    +   +R+   ++  G
Sbjct: 83  VIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGG 142

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              +V+ F+ ++D  CK G+M  A  L+E M + G+  +   YNTL++GFC  G  ++AK
Sbjct: 143 TCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAK 202

Query: 186 ELFVSM-ESMGCKHNVF--------------------SYSILINGYCKNKEIEGALSLYS 224
            L   + ES G K +VF                    +Y+ +I+ YCK   +E A +LY 
Sbjct: 203 SLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM+  G  P VVTY+++  GL +  ++  A +L  EM++ GV  +  AY T ID L K G
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
              EA      L +    LD+   + L+DGL KS + K A ++F +L +  LI + +TY 
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +I   C  G M++   L  +ME K + P+ + +++++ G  +     + + ++ +M ++
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442

Query: 405 N 405
           N
Sbjct: 443 N 443



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 207/400 (51%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL+ ++   G  P+V+TYS+++NGLC+ G    A  L  EM     + GV   P+ V
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM----KKMGV--DPNHV 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+ID L K G   +A     Q+  + +  D+V   +++ G   ++   EA+ +F  +
Sbjct: 310 AYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRAL 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN +T++ ++D  CK G ME    LL+ M +  + PN   Y+++++G+   G +
Sbjct: 370 SKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGIL 429

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   M       N + Y+ILI+GYCK  + E A  LY+EM   G+K   V ++ L
Sbjct: 430 DEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +++ A +L  ++   G+  D   Y + +DG  K G    AL +   +     
Sbjct: 490 VNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSI 549

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ LI+GL + G+ + A  ++  +    L  +  TYNIMI A C  G++D A +
Sbjct: 550 PFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALE 608

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L+ +M++  + P  +  NTL++G     E  K + +L+ M
Sbjct: 609 LWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM 648



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 214/413 (51%), Gaps = 27/413 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   +VI ++TLI+G C+ G   +AL+L E M     + G++   D V Y T+I+G CK 
Sbjct: 142 GTCKDVIGFNTLIDGYCKAGEMSLALDLVERM----RKEGLL--SDIVSYNTLINGFCKR 195

Query: 74  GFVDKAKELLLQM-------------------KDKNIN--PDVVTYNSVIRGFCYANDSN 112
           G  DKAK LL ++                   KD N+N   D++TY ++I  +C  +   
Sbjct: 196 GEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLE 255

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA+ L+ EM+  G  P+VVT+S I++ LCK+G++ EA +LL  M ++GV PN   Y TL+
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLI 315

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D     G    A      +   G   ++   + L++G  K+ + + A  ++  +    + 
Sbjct: 316 DSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLI 375

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  +TY  L  G  ++  +ER   L  EM+   +  +   Y + I+G  K G + EA+ +
Sbjct: 376 PNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINV 435

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
            + +       +   Y+ LIDG CK+G+ +IA +L++ +    L  + V ++++++ L  
Sbjct: 436 MKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKR 495

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +MD+A +L  D+ ++G+  D V + +LM G  +  + S  + ++  M E++
Sbjct: 496 GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 204/386 (52%), Gaps = 7/386 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E ++ITY+T+I+  C+      A  L+EEMI  NG       PD V Y++I++GLCK+G 
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMI-INGFL-----PDVVTYSSIVNGLCKDGR 288

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + +A+ELL +MK   ++P+ V Y ++I     A  + EA     +++ +G+  ++V  + 
Sbjct: 289 LSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTT 348

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D L K+ K +EA  +   + ++ + PN+  Y  L+DG+C  G + R + L   ME   
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV +YS +INGY K   ++ A+++  +ML + I P    Y  L  G  +  + E A 
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L++EM+  G+  +   +   ++ L +   + EA EL + +      LD  +Y+ L+DG 
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            K+G+   A  +   +    +  DVVTYN++I+ L   GK + A  ++  M   G+AP+ 
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQ 587

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
             +N ++    +  E    +EL + M
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEM 613



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 198/407 (48%), Gaps = 10/407 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + + G   + + Y++L++G  + G    ALN+ EEM   +  F      D V
Sbjct: 501 EAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPF------DVV 554

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL + G  + AK +   M +  + P+  TYN +I+ +C   + + A  L+ EM
Sbjct: 555 TYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM 613

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+ +T + ++  L + G++E+A  +L  M  +G+ PN  ++  L++    +G+ 
Sbjct: 614 KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKA 673

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   ++   +  MG K N  +Y+ LI  +C+ +  + A S+   M+  G     VTYN L
Sbjct: 674 NAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNAL 733

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E   V++A   + +M   GV+ +   Y   + GL   G + E  ELF  ++    
Sbjct: 734 IRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGL 793

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  LI G  K G  K +  L+  +     +    TYN++I      GKMD+A +
Sbjct: 794 NPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARE 853

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCI---RNNETSKVVELLHRMDERN 405
           L  +M+ +GV P    ++ L+ G     ++ +  + ++ ++R D +N
Sbjct: 854 LLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKN 900



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 59/302 (19%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M +  + P   ++N L+  F   G V++  +++  M       NV+++++L++ +CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF-------------------- 255
           +  AL L   +    ++   VTYNT+  G  +   V +AF                    
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 256 ---------------KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                          ++ D +   G   D   + T IDG CK G +  AL+L   +R   
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFH--SLPRGV-------------------LIAD 339
              DI SY+ LI+G CK G    A  L H  S  RGV                   L AD
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           ++TY  +I   C    +++A  L+ +M   G  PD V +++++ G  ++   S+  ELL 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 400 RM 401
            M
Sbjct: 298 EM 299



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 18/165 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF K+K  G  P+  TY TLI+G  + G+   ++ L+ EM+      G V  P   
Sbjct: 780 ERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQ----GFV--PKTS 833

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND----------- 110
            Y  +I    K G +D+A+ELL +M+ + + P   TY+ +I G+C  +            
Sbjct: 834 TYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKI 893

Query: 111 -SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
              +AK L  EM D+G  P   T + I     + GKM +A +LL+
Sbjct: 894 YRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLK 938


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 9/378 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
             ++++  +G  P V  Y+ LIN  C+ G    A  +F E I   G      +P  V + 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNE-IRKRG-----LRPTTVSFN 262

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+GLCK   +D+   L   M++  I PDV TY+ +I G C     + A++LF EM  +
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PN +TF+ ++D   ++ +M+ A      M+ +GV+P+  +YNTL++G C  G VN+A
Sbjct: 323 GLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++L   M+ +G K +  +Y+ LI+GYCK  ++E A+ +   M  +G+    V +  L  G
Sbjct: 383 RKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISG 442

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V  A +   EM   G+  D   Y   IDG CK G +    +L + ++I   +  
Sbjct: 443 FCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L++GLCK G++K A  L  ++    +  D +TYNI++   C +G   KA DL  
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLK 559

Query: 365 DMEAKGVAPDCVAFNTLM 382
               KG+  D   + +L+
Sbjct: 560 LRNEKGLIVDYAYYTSLV 577



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 14/369 (3%)

Query: 41  LFEEMINGNG------------EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD 88
           L ++MIN N             E+G    P    Y  +I+  CKEG +  AK +  +++ 
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGF--PPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           + + P  V++N++I G C + + +E  RL   M +  + P+V T+SV++  LCK G+++ 
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A QL + M Q G+RPN   +  L+DG   + R++ A   +  M +MG K ++  Y+ L+N
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLN 371

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK  ++  A  L  EM   G+KP  +TY TL  G  +   +E A ++   M   GV  
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D  A+   I G C++G + +A    R +     + D  +Y+ +IDG CK G +K+ ++L 
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +        V+TYN++++ LC  G+M  A+ L   M   GV PD + +N L+ G  +N
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKN 551

Query: 389 NETSKVVEL 397
            +   +++L
Sbjct: 552 GKAEDLLKL 560



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 167/309 (54%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P V  YN +I  FC      +AK +F E+  +G++P  V+F+ +++ LCK+  ++E  +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M +  + P+ F Y+ L+ G C  GR++ A++LF  M+  G + N  +++ LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ ++ A++ Y +ML+ G+KP +V YNTL  GL ++  V +A KL DEM+  G+  D   
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T IDG CK G +  A+E+ + +      LD  +++ LI G C+ GR++ A      + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  D  TY ++I   C  G +     L  +M+  G  P  + +N LM G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 393 KVVELLHRM 401
               LL  M
Sbjct: 521 NANMLLEAM 529



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G  P  ++++TLINGLC++ +      L + M            PD  
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR------IYPDVF 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I GLCKEG +D A++L  +M+ + + P+ +T+ ++I G   +   + A   + +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++V ++ +++ LCK G + +A +L++ M  +G++P+   Y TL+DG+C  G +
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M   G   +  +++ LI+G+C++  +  A     EM+  G+KP   TY  +
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+  FKL  EMQ +G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
             D  +Y+ L++G CK+G+   A +L        LI D   Y  ++
Sbjct: 535 TPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K  G +P+ ITY+TLI+G C+ G    A+    E+  G  E GVV   D V
Sbjct: 381 KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM----EIRKGMNEEGVVL--DNV 434

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I G C++G V  A+  L +M +  + PD  TY  VI G+C   +     +L  EM
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P V+T++V+M+ LCK G+M+ A+ LLE M+ +GV P+   YN L++G C  G  
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG-- 552

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
            +A++L       G   +   Y+ L++ Y K+
Sbjct: 553 -KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           +++ G  P    YN L++ FC  G +  AK +F  +   G +    S++ LING CK++ 
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++    L   M    I P V TY+ L  GL +  +++ A +LFDEMQ+ G+  +   +  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDG  ++  +  A+  +  +  +  + D+  Y+ L++GLCK G +  A +L   +    
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D +TY  +I   C +G ++ A ++   M  +GV  D VAF  L+ G  R+       
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 396 ELLHRMDE 403
             L  M E
Sbjct: 454 RTLREMVE 461



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 35/305 (11%)

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF----- 188
           S+I   + + GK   AS    ++   G R + FV++ LM  +  +G V+ A + F     
Sbjct: 122 SIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181

Query: 189 --VSMESMGCKH----------------------------NVFSYSILINGYCKNKEIEG 218
               +   GC +                             V  Y+ILIN +CK   I  
Sbjct: 182 SNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRD 241

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  +++E+  +G++PT V++NTL  GL +   ++  F+L   M+ + +  D + Y   I 
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLCK G +  A +LF  ++      +  +++ LIDG  +S R+  A   +H +    +  
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKP 361

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D+V YN +++ LC  G ++KA  L  +M+  G+ PD + + TL+ G  +  +    +E+ 
Sbjct: 362 DLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIR 421

Query: 399 HRMDE 403
             M+E
Sbjct: 422 KGMNE 426



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/221 (18%), Positives = 90/221 (40%), Gaps = 2/221 (0%)

Query: 186 ELFVSMESMGCKHNVFSY-SILINGYCKNKEIEGALSLYSEML-SKGIKPTVVTYNTLFI 243
           + + +M +    H +F     +I      K  + A S+++ +L + G + +   ++ L I
Sbjct: 102 QSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMI 161

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
             ++   V  A + F  ++              +D +  +   V     +  +       
Sbjct: 162 AYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPP 221

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            ++ Y+ LI+  CK G ++ A  +F+ + +  L    V++N +I+ LC    +D+   L 
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ME   + PD   ++ L+ G  +        +L   M +R
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 199/381 (52%), Gaps = 6/381 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A+L ++++     PNV  Y+++I+ LC+      AL + ++M  G       C PDA+ +
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG------CDPDAITF 402

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           +T+I GLC+EG V +A+ LL +     +NP++ +Y S+I GFC   +   A  L +EMM+
Sbjct: 403 STLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMME 462

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G  P+VVTF  ++  L   G++ EA  + E M    + P+A +YN L+ G C    +  
Sbjct: 463 RGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPA 522

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A+ L   M       + + Y+ LI+G+ +N+ ++ A  ++  M  KGI P VV YN +  
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   +  A +    M++ G   D + Y T I G  K G I  AL L   +   +C+ 
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQP 642

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++ +YS LI+G CK G    A  LF S+    L  +V+TY I+I +L    K+ +A   F
Sbjct: 643 NVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYF 702

Query: 364 LDMEAKGVAPDCVAFNTLMLG 384
             M     +P+    ++L+ G
Sbjct: 703 EYMLLNQCSPNDYTLHSLVTG 723



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 195/408 (47%), Gaps = 42/408 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN + Y+ LI+G CR G     + L  EM    G       P  V Y T++  L ++
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM-EAKGLL-----PTVVTYGTLMSWLGRK 342

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G ++K   LL +M+++ + P+V  YNSVI   C    +++A  +  +M   G  P+ +TF
Sbjct: 343 GDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITF 402

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S ++  LC+ G+++EA +LL    +  + PN   Y +L+ GFC+ G V  A  L V M  
Sbjct: 403 STLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMME 462

Query: 194 MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
            G   +V +                                   Y++LI+G CK K +  
Sbjct: 463 RGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPA 522

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A +L  EML + + P    Y TL  G      ++ A K+F+ M++ G+  D   Y   I 
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G C+ G + EA+E   T+R +    D  +Y+ LI G  K G +  A  L   + +     
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQP 642

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +VV Y+ +I+  C  G  D A  LF  ME++G+ P+ + + T+++G +
Sbjct: 643 NVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITY-TILIGSL 689



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 182/385 (47%), Gaps = 8/385 (2%)

Query: 22  YST--LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           YST  ++ GLC  G     L L E        +G  C P+AV Y  +IDG C+ G V + 
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIE------ARWGAGCVPNAVFYNVLIDGYCRRGDVGRG 313

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             LL +M+ K + P VVTY +++       D  +   L  EM ++ + PNV  ++ ++D 
Sbjct: 314 ILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDA 373

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK     +A  +L+ M   G  P+A  ++TL+ G C  GRV  A+ L           N
Sbjct: 374 LCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPN 433

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           + SY+ LI+G+C   E+  A +L  EM+ +G  P VVT+  L  GL    QV  A  + +
Sbjct: 434 LSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M    +  D   Y   I GLCK   +  A  L   +       D   Y+ LIDG  ++ 
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            L  A ++F  + +  +  DVV YN MI   C  G M++A +    M   G  PD   + 
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYT 613

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  +    S  + LL  M +R
Sbjct: 614 TLIGGYAKQGNISGALSLLCDMMKR 638



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 189/398 (47%), Gaps = 21/398 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +   +   PN+ +Y++LI+G C  G  IVA NL  EM+    E G    PD V
Sbjct: 417 EAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMM----ERGHT--PDVV 470

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I GL   G V +A  +  +M  + + PD   YN +I G C       A+ L  EM
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++Q V P+   ++ ++D   +N  ++EA ++ E M Q G+ P+   YN ++ G+C  G +
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A E   +M  +G   + F+Y+ LI GY K   I GALSL  +M+ +  +P VV Y++L
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++   + A  LF  M+  G+  +   Y   I  L K   +V A   F  + + +C
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA---------------WELFHSLPRGVLIADVVTYNIM 346
             +  +   L+ GLC S    I+                ++F +L           YN +
Sbjct: 711 SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAI 770

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           I +LC    + +A DL   M  KG  PD   F +L+ G
Sbjct: 771 IFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYG 808



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 167/385 (43%), Gaps = 4/385 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           +S L+  L R G          +M        V   P       ++      G   KA E
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAV---PTRACLGALVATYADAGMEAKAAE 209

Query: 82  LLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +  + ++ +   P     N ++R        ++A++L+ EM+ +    +  +  V++  L
Sbjct: 210 MCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGL 269

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G +E+  +L+E     G  PNA  YN L+DG+C  G V R   L   ME+ G    V
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y  L++   +  ++E   SL SEM  + + P V  YN++   L +     +A  +  +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M   G   D   + T I GLC+ G + EA  L R     +   ++ SY+ LI G C  G 
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           + +A  L   +       DVVT+  +IH L   G++ +A  +   M A+ + PD   +N 
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           L+ G  +         L+  M E+N
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQN 534



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 29/192 (15%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF  +++ G  PNVITY+ LI  L +    + A   FE M+         C P+   
Sbjct: 663 AECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ------CSPNDYT 716

Query: 63  YTTIIDGLC-------------------KEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
             +++ GLC                   K   +D  + L+    +   +P    YN++I 
Sbjct: 717 LHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALV----NDRCDPRNSAYNAIIF 772

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
             C  N   EA  L  +M ++G +P+  TF  ++   C  GK  E   +L    Q     
Sbjct: 773 SLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELE 832

Query: 164 NAFVYNTLMDGF 175
            A  Y  L D +
Sbjct: 833 VASRYKILFDQY 844



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 21/133 (15%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVA---------------LNLFEEM 45
           + AA  F  +    C PN  T  +L+ GLC +  +I++               L++F  +
Sbjct: 696 VRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRAL 755

Query: 46  INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
           +N        C P    Y  II  LC    + +A +L  +M +K   PD  T+ S++ GF
Sbjct: 756 VNDR------CDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGF 809

Query: 106 CYANDSNEAKRLF 118
           C    S E + + 
Sbjct: 810 CSVGKSREWRTIL 822


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 211/397 (53%), Gaps = 4/397 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA ++  +    G  PNV+T++ +I+G  + G   +AL L  +M       G   KPD+
Sbjct: 180 VEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKM---EVMSGCSVKPDS 236

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y + ++G CK G +  A+E   +M  K I P+V TY +++ G+        A RL  E
Sbjct: 237 VTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDE 296

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++++G+ PN V ++ I+  L   G ME AS LL  MI   + P+ F Y+ +++G C  G 
Sbjct: 297 LVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGY 356

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A +    +  M    + FS++++IN  C++  + GA  L + M  +G+ P VVT+ T
Sbjct: 357 LNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGT 416

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +  +VE A +++++M + G   +   Y + I+G  K G    A+ L  TLR + 
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMG 476

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ LI G C  G++  A+ LF  +    ++A  VTYN +I++LC  G + +A 
Sbjct: 477 L-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAK 535

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +L   M  +G+ PD V +  L+    +     +V+EL
Sbjct: 536 ELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 206/379 (54%), Gaps = 15/379 (3%)

Query: 14  GC--EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           GC  +P+ +TY++ +NG C+ G+  VA    +EM+      G   +P+   Y T++DG  
Sbjct: 229 GCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEML------GKEIEPNVRTYATLVDGYT 282

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + G ++ A  L  ++ +K + P+ V YNS+I       D   A  L  +M+D+ + P+  
Sbjct: 283 RVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQF 342

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T+S++++ LC+NG + EA + L++++++ +  +AF +N +++  C +  +  AK+L  +M
Sbjct: 343 TYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANM 402

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G   +V ++  LI+ +CK+ ++E A+ +Y +M+  G KP ++ YN++  G  +    
Sbjct: 403 YVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSF 462

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A  L D ++R G+  D   Y T I G C  G I +A  LF  +R         +Y+ L
Sbjct: 463 DPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTL 521

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL---CADGKMDKAHDLFLDMEA 368
           I+ LCK+G +  A EL   +    LI D VTY I+I +    C+  ++ + HD    M  
Sbjct: 522 INSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDY---MVL 578

Query: 369 KGVAPDCVAFNTLMLGCIR 387
           KGV PD   + T+++  ++
Sbjct: 579 KGVVPDRQTYQTMVIPLLQ 597



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 175/350 (50%), Gaps = 3/350 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +CK    ++  ++    + G  + A E++ +++       V  +N+ +      ND N  
Sbjct: 88  ICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRF 147

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            +++ EM+  G   NV TF++I+  L K G++ EA  ++   ++ G+ PN   +N ++DG
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207

Query: 175 FCLTGRVNRAKELFVSMESM-GC--KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
               G ++ A +L   ME M GC  K +  +Y+  +NG+CK   +  A     EML K I
Sbjct: 208 AIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P V TY TL  G   +  +E AF+L DE+   G+  ++  Y + I  L   G +  A  
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +   +   D  +YS +I+GLC++G L  A++    +    L+ D  ++N++I+ LC
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
               +  A  L  +M  +G+ PD V F TL+    ++ +    +++  +M
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKM 437



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/114 (21%), Positives = 58/114 (50%)

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A E+   L++    + + +++  +  L K   +   W+++  +     I +V T+N++I+
Sbjct: 112 AYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIY 171

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           AL  +G++ +A  +       G+ P+ V FN ++ G I+       ++L+ +M+
Sbjct: 172 ALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKME 225


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 213/433 (49%), Gaps = 47/433 (10%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           + A G + +V+TY+TLI+GLC++G    A  L ++M +        C P+ V YT +IDG
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVVTYTALIDG 54

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK      A + + +M      PD+VTYNS+I G C AN  ++A  +  E++  G  PN
Sbjct: 55  LCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPN 114

Query: 130 VVTFSVIMDELCKNGKMEEASQLL------------------------------------ 153
            +T+S ++   C+  ++++A  L+                                    
Sbjct: 115 HITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD 174

Query: 154 -ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI+ G  P+   YNT + G C  G++++  E+   M+  G   +V ++  +I+G CK
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ--RHGVAADT 270
              I+ A  ++  ML +G  P  +TY+ +   L   ++++   ++ + MQ  + G   + 
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           + +  FI  LC++G    A  +   +       ++ SY+ +IDGLCKSG +  AW+L   
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 331 -LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV-APDCVAFNTLMLGCIRN 388
            L  G    DV+ +N +I   C  G++ +AH L ++M+AK +  PD V +NTL+ G  + 
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 389 NETSKVVELLHRM 401
               +   LL  M
Sbjct: 415 GSLKQAKLLLQEM 427



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 215/444 (48%), Gaps = 45/444 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           +A  +  +L   G  PN ITYSTL+   CR      A  L  EMI      G VC     
Sbjct: 98  DAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMI----LRGSVCNLVVY 153

Query: 58  -------------------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
                                          PD V Y T I GLCK G +DK  E+L +M
Sbjct: 154 IDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 213

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
               I PDVVT+ S+I G C AN  ++A ++F  M+++G  P+ +T+S+++D L +  ++
Sbjct: 214 DRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 273

Query: 147 EEASQLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           +   ++LE M  ++ G     + +N  +   C +G+   AK + + M   G   N+ SY+
Sbjct: 274 DTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYN 333

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
            +I+G CK+  ++ A  L  +ML  G  KP V+ +NTL  G  +  ++ +A +L  EM+ 
Sbjct: 334 FVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKA 393

Query: 264 HGV-AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
             +   D   Y T IDG  K G + +A  L + ++ + C+ ++ +Y+ LI+G  K G  +
Sbjct: 394 KNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYE 453

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VAPDCVAFNT 380
            A  LF  +       D++TYN ++ A    G M KA  ++  ++ K    +PD + +  
Sbjct: 454 EAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRI 513

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G  R  +T + + LL  M  R
Sbjct: 514 LIDGYCRAEDTEQGLTLLQEMTAR 537



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 48/430 (11%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY+T I+GLC+ G     L + EEM  G    G+   PD V + +II GLCK   +
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG----GI--PPDVVTFCSIISGLCKANRI 238

Query: 77  DKAKELLLQMKDKNINPDVVTY-------------------------------------N 99
           D A ++   M ++   PD +TY                                     N
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 100 SVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           + I   C +     AK + + M++ G  PN+++++ ++D LCK+G +++A +L   M+  
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 160 GV-RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIE 217
           G  +P+   +NTL+ GFC  GR+++A +L + M++   C  +V +Y+ LI+G  K   ++
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLK 418

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM + G KP VVTY  L  G  +    E A  LFDEM   G   D   Y T +
Sbjct: 419 QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVL 478

Query: 278 DGLCKNGYIVEALELFRTLR--ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
               K G + +A  +++ L+     C  D  +Y  LIDG C++   +    L   +    
Sbjct: 479 SAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG 538

Query: 336 LIADVVTYNIMIHALCADGKM-DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
              D  TYN++I  L    ++  KA  ++  M  +   P    FN+L+   +R  + +  
Sbjct: 539 WSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSA 598

Query: 395 VELLHRMDER 404
             ++  M+E+
Sbjct: 599 RSMVQEMNEK 608



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 155/287 (54%), Gaps = 9/287 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN+++Y+ +I+GLC++G+   A  L  +M++        CKPD + + T+I G CK 
Sbjct: 324 GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG-----CCKPDVIFFNTLISGFCKA 378

Query: 74  GFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           G + +A +LL++MK KNI  PDVVTYN++I G        +AK L  EM   G +PNVVT
Sbjct: 379 GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVT 438

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +++   K+G  EEA  L + M   G  P+   YNT++  F   G +++A+ ++  ++
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK 498

Query: 193 SMG--CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +    C  +  +Y ILI+GYC+ ++ E  L+L  EM ++G      TYN L   L E  +
Sbjct: 499 NKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEE 558

Query: 251 V-ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           V  +A  ++ +M           + + +    + G +  A  + + +
Sbjct: 559 VPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 9/197 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++A GC+PNV+TY+ LING  + G    A +LF+EM +  G     C PD +
Sbjct: 419 QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEM-SAKG-----CFPDII 472

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN--INPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y T++    K G + KA+ +  Q+K+K    +PD +TY  +I G+C A D+ +   L  
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQ 532

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKM-EEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           EM  +G   +  T++V++ +L +  ++  +A  + + M+     P+A ++N+L+  F  T
Sbjct: 533 EMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRT 592

Query: 179 GRVNRAKELFVSMESMG 195
           G VN A+ +   M   G
Sbjct: 593 GDVNSARSMVQEMNEKG 609


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 213/415 (51%), Gaps = 24/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI----NGNGEFGVVCK 57
           +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++I    + + +F   C+
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  ++DGLCK   VD A ELL  M      P+ + Y+++I GFC A   
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V T++ ++D + K+G+++ A ++L  M++    PN   Y  +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P  VTY  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 551 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 610

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL   +   P  V   D   Y 
Sbjct: 611 EEMESYGTVPIAP------VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV-KTDNDMYA 663

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            +I ALC   ++++A  L+ +M  +G  P+   F  L+ G +   +  + ++L +
Sbjct: 664 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 718



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 200/427 (46%), Gaps = 32/427 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI------VALNLFEEMINGNGEFGVVC 56
           A  L  ++   GC P  + Y+  I  +C            +A  ++ EM+  N      C
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN------C 184

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + V        LC  G  DKA +L+ +M  K   PD  TY+ VI   C+A    +A  
Sbjct: 185 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 244

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A  L E M  +G  P    Y  L+  + 
Sbjct: 245 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 304

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------ 230
              +V +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++         
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 364

Query: 231 ----------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                     + P VVTY  L  GL + H+V+ A +L D M   G   +   Y   IDG 
Sbjct: 365 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 424

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  L++ KC     + +Y+ LID + K GRL +A ++   + +     
Sbjct: 425 CKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 482

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  MI  LC  G+ +KA  L   ME KG +P+ V +  L+ G  +  +    ++L 
Sbjct: 483 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 542

Query: 399 HRMDERN 405
            +M  + 
Sbjct: 543 TQMSRKG 549



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN   +++L++  C       A  L   M          C P  V+Y   I  +C +
Sbjct: 107 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 160

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D A+++  +M   N   + V   +  R  C     ++A +L  EMM +G  
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P  VTY  L  GL +
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    CE +   Y  LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DG++D A  +   M      P+ V +  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 184/438 (42%), Gaps = 66/438 (15%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T     + LC+ G    AL++ E       +F    K D V+ T +I GL +  + D+A 
Sbjct: 12  TVGCFAHALCKEGRWADALDMIER-----EDF----KLDTVLCTHMISGLMEASYFDEAM 62

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
             L +M+  +  P+VVTY +++ GF         KR+   MM +G  PN   F+ ++   
Sbjct: 63  SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 122

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESM 194
           C       A +LL  M   G  P   VYN  +   C   +      ++ A++++  M + 
Sbjct: 123 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 182

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            C  N  + +      C   + + A  L  EM+ KG  P   TY+ +   L    +VE+A
Sbjct: 183 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 242

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI-- 312
           F LF EM+  GV  D + Y   ID  CK G I +A  LF  +R + C   + +Y+ LI  
Sbjct: 243 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 302

Query: 313 ---------------------------------DGLCKSGRLKIAWELFHSL-------- 331
                                            DGLCK+G +  A+E++  L        
Sbjct: 303 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 362

Query: 332 --------PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
                    R  L  +VVTY  ++  LC   K+D AH+L   M + G  P+ + ++ L+ 
Sbjct: 363 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 422

Query: 384 GCIRNNETSKVVELLHRM 401
           G  +  +     E+  +M
Sbjct: 423 GFCKAGKIDSAQEVFLQM 440



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 134/355 (37%), Gaps = 75/355 (21%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGK--------------------------------MEE 148
           M + G   +  T       LCK G+                                 +E
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDE 60

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A   L  M      PN   Y TL+ GF    ++   K +   M + GC  N   ++ L++
Sbjct: 61  AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG------------------------ 244
            YC  K+   A  L + M + G  P  V YN +FIG                        
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEM 179

Query: 245 ------------------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
                             L  + + ++AF+L  EM R G   DT  Y   I  LC    +
Sbjct: 180 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            +A  LF+ ++++    D+ +Y+ LID  CK+G ++ A  LF  +        VVTY  +
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 299

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           IHA     ++ +A+D+F  M   G  P+ V +  L+ G  +    SK  E+  ++
Sbjct: 300 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 4/122 (3%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            +  +++++G  P    Y  LI+   + G   +A+ L +EM+    E     K D  +Y 
Sbjct: 608 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM----EVPSSVKTDNDMYA 663

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I  LC    V++A  L  +M  +   P++  +  +I+G       +EA +L   +  +
Sbjct: 664 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 723

Query: 125 GV 126
           GV
Sbjct: 724 GV 725


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 176/313 (56%), Gaps = 6/313 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F  ++++G  P+V +YS LI+GL + G      N+F  M      F +    DA  Y  
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNA 603

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++DG CK G V KA E+L +MK+K + P V TY +++ G    +  +EA  LF E   +G
Sbjct: 604 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 663

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ NVV +S ++D   K G+++EA  +LE M++ G+ PN + +N+L+D       +N A 
Sbjct: 664 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
             F SM+ M C  N ++YSILING C+ ++   A   + +M  +G+ P VVTY T+  GL
Sbjct: 724 VCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++  +  A+ LF+  + +G   D  ++   I+G+      +EA ++F   R+  C ++I
Sbjct: 784 AKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINI 843

Query: 306 RSYSCLIDGLCKS 318
           +S   L+D L KS
Sbjct: 844 KSCISLLDALNKS 856



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 206/398 (51%), Gaps = 6/398 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F      GC P+ +TY +LI+GL + G    A  LFE+M++           + V
Sbjct: 441 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH------NANPV 494

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I      G  +   ++  ++  +   PD+   N+ +     A +  + + +F ++
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V ++S+++  L K G+  E S +   M Q G   +A  YN ++DGFC +G+V
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   M+    +  V +Y  +++G  K   ++ A  L+ E  SKGI+  VV Y++L
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +EM + G+  + + + + +D L K   I EAL  F++++ +KC
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L+ +VVTY  MI  L   G +  A+ 
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 794

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LF   +A G  PD  +FN L+ G    N   +  ++  
Sbjct: 795 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFE 832



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 211/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++K    EP+++ Y+  I+   + G+  +A   F E+    G      KPD V
Sbjct: 232 DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL-KAQG-----LKPDDV 285

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  LCK G + +A+EL  QM+ +   P    YN++I G+  A    +A +L   +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+VV+F+ I+  L K  K++EA  L E+M +    PN+  YN ++D  CL GRV
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 404

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   ME      N+ + +I+++  CK +++E A  ++     +G  P  VTY +L
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F+ L    C
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+   +  +D + K+G ++    +F  +     + DV +Y+I+IH L   G+  +  +
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M+ +G A D  A+N ++ G  ++ +  K  E+L  M E+
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +L+  GC P+V+++++++  L +      AL+LFE M           +P++ 
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID LC  G V++A  +L +M+  ++ P+++T N ++   C A    EA ++F   
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VT+  ++D L K G+++EA +L E M+  G   N  VY +L+  F + GR 
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  P V +Y+ L
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +M  KG+ P+   +N+L+   ++  E ++ +     M E
Sbjct: 690 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 10/391 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  +LK     P    Y+ LI  L        AL L  +M     E GV       +
Sbjct: 166 AVAVMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH------L 216

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++  L +EG V  A  L+ ++K   + PD+V YN  I  F  A + + A + F E+ 
Sbjct: 217 FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 276

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG++P+ V+++ ++  LCK G++ EA +L   M      P A+ YNT++ G+   GR  
Sbjct: 277 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 336

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +   GC  +V S++ ++    K ++++ ALSL+ E++ K  +P   TYN + 
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 395

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +VE A+++ DEM+   +  +       +D LCK   + EA ++F +     C 
Sbjct: 396 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 455

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y  LIDGL K G++  A+ LF  +      A+ V Y  +I      G+ +  H +
Sbjct: 456 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           F ++  +G  PD    NT M    +  E  K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 158/333 (47%), Gaps = 1/333 (0%)

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L +   +D A   +  M+     P    Y  +I     A     A  L  +M + G + 
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            V  F+ ++  L + G++ +A  L++ +    + P+  +YN  +D F   G V+ A + F
Sbjct: 213 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 272

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             +++ G K +  SY+ +I   CK   +  A  L+++M ++   P    YNT+ +G    
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 332

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            + E A+KL + ++  G      ++ + +  L K   + EAL LF  ++    E +  +Y
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTY 391

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +ID LC  GR++ A+ +   +    L  +++T NIM+  LC   K+++A+ +F     
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +G  PDCV + +L+ G  +  +  +   L  +M
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 7/214 (3%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           + +  C H       L     + + ++ A+   + M     +P    Y  L   L E  +
Sbjct: 142 LPNQACAH-------LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            ERA +L  +MQ  G       + T +  L + G + +AL L   ++    E DI  Y+ 
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 254

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
            ID   K+G + +AW+ FH L    L  D V+Y  MI  LC  G++ +A +LF  MEA+ 
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P   A+NT+++G           +LL R+ ER
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 348


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 206/430 (47%), Gaps = 39/430 (9%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F K    G +PN+I +++LINGLC+ G    A  + EEM+          KP+   +T +
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW------KPNVYTHTAL 342

Query: 67  IDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           IDGLCK+G+ +KA  L L++ +  +  P+V TY S+I G+C  +  N A+ L   M +QG
Sbjct: 343 IDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQG 402

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + PN  T++ ++D   K G  E+A +L++LM + G   N F YN  +D  C  GR   A 
Sbjct: 403 LVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEAC 462

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L      +G + +  +Y+ILI+  C+  +   AL  +S+M   G++P + TYNTL    
Sbjct: 463 KLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAF 522

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++E + KLF E    G+      Y + I G C++  +  AL+ F  +    C  D 
Sbjct: 523 SRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDS 582

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV----------------------- 341
            +Y  LI GLCK  +L  A +L+ ++  +G+   +V                        
Sbjct: 583 LTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILER 642

Query: 342 --------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                   T N +I  LC++ K+  A   F  +  K    D V        C  +N+ + 
Sbjct: 643 LDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYAL 702

Query: 394 VVELLHRMDE 403
           V +L  R+ +
Sbjct: 703 VSDLSERISK 712



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 188/368 (51%), Gaps = 9/368 (2%)

Query: 38  ALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           A N+F+EM + G      VC PD+V Y  +    C+ G +      L  M  +    D  
Sbjct: 215 AENVFDEMRVRG------VC-PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNA 267

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           T   +I  FC    ++     F + ++ G++PN++ F+ +++ LCK G +++A ++LE M
Sbjct: 268 TCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEM 327

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKE 215
           ++ G +PN + +  L+DG C  G   +A  LF+ +  S   K NV +Y+ +I+GYCK  +
Sbjct: 328 VKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDK 387

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A  L S M  +G+ P   TY  L  G  +    E+A++L D M + G +A+ + Y  
Sbjct: 388 LNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNA 447

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           FID LCK G  +EA +L +    L  + D  +Y+ LI  LC+    + A   F  + +  
Sbjct: 448 FIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAG 507

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D+ TYN +I A     +M+++  LF +    G+ P    + +++ G  R+   S  +
Sbjct: 508 VQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLAL 567

Query: 396 ELLHRMDE 403
           +  +RM +
Sbjct: 568 KFFNRMSD 575



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 182/404 (45%), Gaps = 19/404 (4%)

Query: 17  PNVITYS---TLINGLCRTGHTIVALNLFEEMINGNG-----EFGVVCKPDAV------- 61
           P+ +T+    T++  L     ++VAL+ F   I          F +VC    +       
Sbjct: 100 PDSLTHEQAITVVASLASEAGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFER 159

Query: 62  ---IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              +   ++    + G   +A  ++++M++  +   V T N V            A+ +F
Sbjct: 160 AHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVF 219

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +GV P+ V++ ++    C+ G++ +  + L+ M++ G   +      ++  FC  
Sbjct: 220 DEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEK 279

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G  +R    F     +G K N+ +++ LING CK   I+ A  +  EM+ KG KP V T+
Sbjct: 280 GFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTH 339

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             L  GL +    E+AF+LF ++ R      +   Y + I G CK   +  A  L   ++
Sbjct: 340 TALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMK 399

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 + ++Y+CLIDG  K+G  + A+EL   + +    A++ TYN  I +LC  G+  
Sbjct: 400 EQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFL 459

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A  L       G+  D V +  L+    R  +T + +    +M
Sbjct: 460 EACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM 503



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  K    G + + +TY+ LI+ LCR   T  AL  F +M      F    +PD 
Sbjct: 459 LEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM------FKAGVQPDM 512

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T+I    ++  ++++++L  +     + P   TY S+I G+C   + + A + F  
Sbjct: 513 HTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNR 572

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G  P+ +T+  ++  LCK  K++EA QL E M+  G+ P      TL   +C   +
Sbjct: 573 MSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYC---K 629

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + +    V +E +  K  + + + LI   C  +++  A+  + ++L K      VT   
Sbjct: 630 QDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTA 689

Query: 241 LFIGLFE 247
                +E
Sbjct: 690 FTTACYE 696



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F ++   GC P+ +TY  LI+GLC+      A  L+E M++          P  V 
Sbjct: 566 ALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKG------LSPCEVT 619

Query: 63  YTTIIDGLCKEGFVDKAKEL-LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T+    CK+   D A  + +L+  DK +   + T N++IR  C       A   F ++
Sbjct: 620 RLTLAYEYCKQD--DSATAMVILERLDKKLW--IRTVNTLIRKLCSERKVGMAVLFFHKL 675

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           +D+    + VT +       ++ K    S L E
Sbjct: 676 LDKDQNVDRVTLTAFTTACYESNKYALVSDLSE 708


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 213/415 (51%), Gaps = 24/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI----NGNGEFGVVCK 57
           +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++I    + + +F   C+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  ++DGLCK   VD A ELL  M      P+ + Y+++I GFC A   
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V T++ ++D + K+G+++ A ++L  M++    PN   Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P  VTY  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 675

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL   +   P  V   D   Y 
Sbjct: 676 EEMESYGTVPIAPV------YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK-TDNDMYA 728

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            +I ALC   ++++A  L+ +M  +G  P+   F  L+ G +   +  + ++L +
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 200/427 (46%), Gaps = 32/427 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI------VALNLFEEMINGNGEFGVVC 56
           A  L  ++   GC P  + Y+  I  +C            +A  ++ EM+  N      C
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN------C 249

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + V        LC  G  DKA +L+ +M  K   PD  TY+ VI   C+A    +A  
Sbjct: 250 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A  L E M  +G  P    Y  L+  + 
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------ 230
              +V +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++         
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 231 ----------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                     + P VVTY  L  GL + H+V+ A +L D M   G   +   Y   IDG 
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  L++ KC     + +Y+ LID + K GRL +A ++   + +     
Sbjct: 490 CKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 547

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  MI  LC  G+ +KA  L   ME KG +P+ V +  L+ G  +  +    ++L 
Sbjct: 548 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 607

Query: 399 HRMDERN 405
            +M  + 
Sbjct: 608 TQMSRKG 614



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN   +++L++  C       A  L   M          C P  V+Y   I  +C +
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 225

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D A+++  +M   N   + V   +  R  C     ++A +L  EMM +G  
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P  VTY  L  GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    CE +   Y  LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DG++D A  +   M      P+ V +  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 193/475 (40%), Gaps = 83/475 (17%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC---------- 56
           LK FG  P+ +TY+ L+  L   G   +   + +EM         F V C          
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 57  -------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
                        K D V+ T +I GL +  + D+A   L +M+  +  P+VVTY +++ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF         KR+   MM +G  PN   F+ ++   C       A +LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 164 NAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              VYN  +   C   +      ++ A++++  M +  C  N  + +      C   + +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM+ KG  P   TY+ +   L    +VE+AF LF EM+  GV  D + Y   I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI------------------------- 312
           D  CK G I +A  LF  +R + C   + +Y+ LI                         
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 313 ----------DGLCKSGRLKIAWELFHSL----------------PRGVLIADVVTYNIM 346
                     DGLCK+G +  A+E++  L                 R  L  +VVTY  +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  LC   K+D AH+L   M + G  P+ + ++ L+ G  +  +     E+  +M
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 4/122 (3%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            +  +++++G  P    Y  LI+   + G   +A+ L +EM+    E     K D  +Y 
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM----EVPSSVKTDNDMYA 728

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++I  LC    V++A  L  +M  +   P++  +  +I+G       +EA +L   +  +
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHE 788

Query: 125 GV 126
           GV
Sbjct: 789 GV 790


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 224/471 (47%), Gaps = 70/471 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF+K++  G  PNV+TY+ +I+GLC++G    A    E+M               I
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFI 333

Query: 47  NG----------------NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           NG                  E G V  P+ V+Y T+IDG CK G + +A ++   M  K 
Sbjct: 334 NGLIKLEKIDEANCVLKEMSELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD------------ 138
           I+P+ VT NS+I+GFC ++   +A+ +  EM+ +G+  N  +FS++++            
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 139 -----------------------ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
                                   LCK GK  EA +L   ++  G  PN    N L+ G 
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G +    +L   M   G   +  +Y+ LI+G CK  +++    L  EM+ KGI+P +
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T+N L  GL    +++ A +L+ E +++G   + + Y   IDG CK   + E   L   
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADG 354
           L   K EL+   Y+ LI   C +G +  A+ L   +  RGVL++   TY+ ++H LC  G
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS-CATYSSLMHGLCNIG 690

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +D A  L  +M  +G+ P+ V + T++ G  +  + +KV  +L  M   N
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 6/346 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ +L   G  PN++T + LI+GLC+ G+    L L  +M+    E G+V   D +
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDML----ERGLVF--DRI 537

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G CKEG V +  EL  +M  K I PD+ T+N ++ G C A+  +EA RL+ E 
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC 597

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV T+ V++D  CK  K+EE   LL  ++   +  N+ VYN+L+  +C+ G +
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  L   M+S G   +  +YS L++G C    ++ A  L  EM  +G+ P VV Y T+
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ Q+ +   +  EM  H +  + + Y   IDG CK G   EA +L   +     
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
             D  +Y+   +GLCK G+++ A+++   +  G +  D +TY  +I
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 29/430 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-----GNGEFGVVC 56
           EA  +   + + G  PN +T ++LI G C++     A N+ EEMI        G F +V 
Sbjct: 379 EALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +P+  + TT++ GLCK G   +A EL  ++  K   
Sbjct: 439 NWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV 498

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P++VT N++I G C A +  E  +L  +M+++G+  + +T++ ++   CK GK++E  +L
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M++ G++P+ + +N L+ G C   +++ A  L+   +  G   NV++Y ++I+GYCK
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E   +L +E++SK ++   V YN+L         +  AF+L D+M+  GV      
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y + + GLC  G + +A  L   +R      ++  Y+ +I G  K G++     +   + 
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  +  TY IMI   C  GK  +A  L  +M  KG+ PD V +N    G  +  +  
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798

Query: 393 KVVELLHRMD 402
           +  ++   M 
Sbjct: 799 EAFKVCDEMS 808



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 195/388 (50%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V  +ST+IN  C+      A+ LF +M     + GV   P+ V Y  II GLCK 
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKM----EKLGVA--PNVVTYNNIIHGLCKS 304

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A     +M  + ++P ++TY+  I G       +EA  +  EM + G  PN V +
Sbjct: 305 GRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVY 364

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  CK G + EA ++ + M+  G+ PN+   N+L+ GFC + ++ +A+ +   M  
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  S+S++IN  C       AL    EML + ++P      TL  GL +  +   
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G   +       I GLCK G + E L+L R +       D  +Y+ LI 
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G CK G++K  +EL   + +  +  D+ T+N+++H LC   K+D+A  L+ + +  G  P
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   +  ++ G  + N+  +   LL+ +
Sbjct: 605 NVYTYGVMIDGYCKANKVEEGENLLNEL 632



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 6/266 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P++ T++ L++GLC       A  L+ E    NG       P+   Y  +IDG CK 
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHE-CKKNGYV-----PNVYTYGVMIDGYCKA 619

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             V++ + LL ++  K +  + V YNS+IR +C   + N A RL  +M  +GV  +  T+
Sbjct: 620 NKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATY 679

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S +M  LC  G +++A  LL+ M + G+ PN   Y T++ G+   G++N+   +   M S
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSS 739

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                N F+Y+I+I+G+CK  + + A  L +EM  KGI P  VTYN    GL +  +VE 
Sbjct: 740 HNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEE 799

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDG 279
           AFK+ DEM    V  D   Y T IDG
Sbjct: 800 AFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 35/361 (9%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A ++   +  K + P + T   ++     AN+  ++  ++  +   G+ P+V  FS +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA---KELFVS----- 190
             CK  + ++A  L   M ++GV PN   YN ++ G C +GR++ A   KE  V      
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 191 ---------------------------MESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
                                      M  +G   N   Y+ LI+GYCK   I  AL + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +MLSKGI P  VT N+L  G  +  Q+ +A  + +EM   G+  +  ++   I+ LC  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
              V AL   R + +     +    + L+ GLCK+G+   A EL+  L     + ++VT 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +IH LC  G M +   L  DM  +G+  D + +NTL+ GC +  +  +  EL   M +
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 404 R 404
           +
Sbjct: 565 K 565


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 12/409 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K  G + +V+ +STLI GLCR G    AL  F+ M       G  C P+ +
Sbjct: 17  QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-------GEECSPNVI 69

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDK-----NINPDVVTYNSVIRGFCYANDSNEAKR 116
            Y T+++GLCK   +D+  EL   M+ +        PDV++Y++VI   C A   ++A  
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            F  M   G  PNVVT+S ++D LCK  +++EA  LL  +    + P A  YN +++GF 
Sbjct: 130 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFK 189

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+ +   EL + M+  G   N+  ++ +++   KN E E A   +  +L  G KP VV
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN    GL +  +V+ A+++  EM    V  D   Y + IDG CK G + +A ++F  +
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
            + +C     ++  L+ G  +  + + A+ +   +     I  + TYN+++  +C    +
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + A +++  M+ K   PD   +  L+    R     +  E L  M+  N
Sbjct: 370 ESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADN 418



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 198/389 (50%), Gaps = 12/389 (3%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+T+ING C+ G    A  L +EM     E GV  K D ++++T+I GLC++G +D+A E
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEM----KERGV--KMDVLLHSTLIQGLCRKGRIDEALE 55

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-----MDQGVQPNVVTFSVI 136
               M ++  +P+V+TYN+V+ G C AN  +E   LF +M        G +P+V+++S +
Sbjct: 56  QFKSMGEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D LCK  ++++A +  + M  +G  PN   Y++L+DG C   RV+ A  L + ++    
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                 Y+ ++NG+ +  +    L L   M  KG    ++ +N +   L++  + E+A +
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            F+ + + G   +   Y   + GLCK G + EA  +   +   K   D+ +YS +IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+GR+  A ++F  +     I   VT+  ++H      K  +A  +  DM   G  P   
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +N LM      +     +E+ H+M  + 
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKK 383



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 184/348 (52%), Gaps = 6/348 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           + GCEP+VI+YST+I+ LC+      A   F+ M        V C P+ V Y+++IDGLC
Sbjct: 101 SHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM------RAVGCAPNVVTYSSLIDGLC 154

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K   VD+A  LL+Q+K +++ P  + YN+V+ GF      +E   L + M ++G   N++
Sbjct: 155 KVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINII 214

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            F+ ++  L KN + E+A Q  E +++ G +PN   YN  + G C  G+V+ A  + + M
Sbjct: 215 DFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEM 274

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
                  +V +YS +I+G+CK   ++ A  +++ M+     P  VT+ TL  G  E  + 
Sbjct: 275 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 334

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AF++ ++M   G       Y   +D +C    +  ALE++  ++  K + D  +Y+ L
Sbjct: 335 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPL 394

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           I  LC++ R+  A E    +    ++ +    + ++  LC  G++D+A
Sbjct: 395 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 442



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 174/328 (53%), Gaps = 6/328 (1%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YTT+I+G CK G VD+A ELL +MK++ +  DV+ ++++I+G C     +EA   F  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM-----IQIGVRPNAFVYNTLMDGFC 176
            ++   PNV+T++ +++ LCK  +++E  +L + M        G  P+   Y+T++D  C
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              RV++A E F  M ++GC  NV +YS LI+G CK   ++ A SL  ++  + + P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN +  G     +     +L   M+  G   +   +   +  L KN    +A + F  L
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + ++ +Y+  + GLCK+G++  A+ +   +    +  DV+TY+ +I   C  G+M
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           DKA D+F  M      P  V F TL+ G
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHG 327



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 25/383 (6%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  K K FG   N+I ++ +++ L +      A   FE ++          KP+ V Y  
Sbjct: 202 LHMKEKGFGI--NIIDFNAMLHALWKNDEQEKACQFFERLLKSGK------KPNVVTYNV 253

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            + GLCK G VD+A  +LL+M +  + PDV+TY+S+I GFC A   ++A  +F  MM   
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P+ VTF  ++    ++ K  EA ++ E M+  G  P    YN LMD  C    V  A 
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           E++  M+    + +  +Y+ LI   C+ + ++ A      M +  + P     + L   L
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V+ A  + D +                  +CK G   EA+E+   + +     D 
Sbjct: 434 CKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDE 477

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  ++  LC   R+  A   F  +        +VTY ++I   C+    D A  +F  
Sbjct: 478 ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEA 537

Query: 366 MEAKGVAPDCVAFNTLMLGCIRN 388
           M A G  P      TL   C+R+
Sbjct: 538 MVAAGFTPQAQTMRTLS-SCLRD 559



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 60/338 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F +L   G +PNV+TY+  ++GLC+ G    A  +  EM+           PD +
Sbjct: 231 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK------VTPDVI 284

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++IIDG CK G +DKA ++  +M      P  VT+ +++ GF     S EA R+  +M
Sbjct: 285 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 344

Query: 122 MDQGVQPNVVTFSVIMDE-----------------------------------LCKNGKM 146
           ++ G  P + T++V+MD                                    LC+  ++
Sbjct: 345 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRV 404

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA-------------------KEL 187
           +EA + L++M    V PN  + + L++  C  G V+ A                    E+
Sbjct: 405 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEV 464

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M   G + +  +Y  ++   C    ++ A++ + +M S+G  P +VTY  L      
Sbjct: 465 IEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACS 524

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
               + AF++F+ M   G        RT    L   GY
Sbjct: 525 ADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 213/415 (51%), Gaps = 24/415 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI----NGNGEFGVVCK 57
           +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++I    + + +F   C+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  ++DGLCK   VD A ELL  M      P+ + Y+++I GFC A   
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V T++ ++D + K+G+++ A ++L  M++    PN   Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P  VTY  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 675

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL   +   P  V   D   Y 
Sbjct: 676 EEMESYGTVPIAPV------YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK-TDNDMYA 728

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            +I ALC   ++++A  L+ +M  +G  P+   F  L+ G +   +  + ++L +
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 200/427 (46%), Gaps = 32/427 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI------VALNLFEEMINGNGEFGVVC 56
           A  L  ++   GC P  + Y+  I  +C            +A  ++ EM+  N      C
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN------C 249

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + V        LC  G  DKA +L+ +M  K   PD  TY+ VI   C+A    +A  
Sbjct: 250 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A  L E M  +G  P    Y  L+  + 
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------ 230
              +V +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++         
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 231 ----------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                     + P VVTY  L  GL + H+V+ A +L D M   G   +   Y   IDG 
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  L++ KC     + +Y+ LID + K GRL +A ++   + +     
Sbjct: 490 CKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 547

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  MI  LC  G+ +KA  L   ME KG +P+ V +  L+ G  +  +    ++L 
Sbjct: 548 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 607

Query: 399 HRMDERN 405
            +M  + 
Sbjct: 608 TQMSRKG 614



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN   +++L++  C       A  L   M          C P  V+Y   I  +C +
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 225

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D A+++  +M   N   + V   +  R  C     ++A +L  EMM +G  
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P  VTY  L  GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    CE +   Y  LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DG++D A  +   M      P+ V +  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 193/475 (40%), Gaps = 83/475 (17%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC---------- 56
           LK FG  P+ +TY+ L+  L   G   +   + +EM         F V C          
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 57  -------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
                        K D V+ T +I GL +  + D+A   L +M+  +  P+VVTY +++ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 104 GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           GF         KR+   MM +G  PN   F+ ++   C       A +LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 164 NAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              VYN  +   C   +      ++ A++++  M +  C  N  + +      C   + +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM+ KG  P   TY+ +   L    +VE+AF LF EM+  GV  D + Y   I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI------------------------- 312
           D  CK G I +A  LF  +R + C   + +Y+ LI                         
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 313 ----------DGLCKSGRLKIAWELFHSL----------------PRGVLIADVVTYNIM 346
                     DGLCK+G +  A+E++  L                 R  L  +VVTY  +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  LC   K+D AH+L   M + G  P+ + ++ L+ G  +  +     E+  +M
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 209/408 (51%), Gaps = 16/408 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF---------- 52
           A  LF  + A GC PNVITY+ LI+G C++G+   A  ++  M  G+ +           
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIK 636

Query: 53  -GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
             V  KP+ V Y  ++DGLCK   V  A++LL  M      P+ + Y+++I GFC A   
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M++ G  PNV T+S ++D L K+ +++   ++L  M++    PN  +Y  +
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG     + + A +L + ME  GCK NV +Y+ +I+G+ K  +++  L L+ EM SKG 
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A+ L +EM++        +Y   I+G  K  +I+ +L 
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLG 874

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG--VLIADVVTYNIMIHA 349
           L   +        I  Y  LID   K+GRL++A EL   +      + A    Y  +I++
Sbjct: 875 LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYS 934

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
                K+  A +LF DM   GV PD   F  L++G IR     + ++L
Sbjct: 935 FSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 196/420 (46%), Gaps = 20/420 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI--VALNLFEEMINGNGEFGVVCKPDA 60
           A  L  K++   C+P  + Y+ LI  +C  G     V   L E+  N     G V     
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVN 456

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+  +    LC  G  +KA +++ +M      PD  TY+ VI   C A+    A  LF E
Sbjct: 457 VV--SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P+V T+++++D   K G +++A   L+ M++ G  P    Y TL+  +    +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           V+ A ELF  M + GC  NV +Y+ LI+GYCK+  IE A  +Y+ M              
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 232 -------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  KP VVTY  L  GL + H+V+ A  L + M   G   +T  Y   IDG CK  
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EA E+F  +       ++ +YS LID L K  RL +  ++   +       ++V Y 
Sbjct: 695 KLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            MI  L    K D+A+ L L ME KG  P+ V +  ++ G  +  +  K +EL   M  +
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 196/426 (46%), Gaps = 28/426 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     ++++  C PNV TY  L+ G C     +        M+   G     C P   
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLNKKQLGRCKRILSMMIAEG-----CYPSYT 379

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND------SNEAK 115
           I+ +++   CK      A +LL +M+     P  V YN +I   C   +         A+
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           + + EM+  G   N V        LC  GK E+A +++  M+  G  P+   Y+ ++   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   RV  A  LF  M+  G   +V++Y+ILI+ + K   I+ A +   EM+  G +PTV
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTY TL     +  +V  A +LF+ M   G   +   Y   IDG CK+G I +A +++  
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 296 LR----ILKCEL------------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           +R    I   ++            ++ +Y  L+DGLCK+ ++K A +L  ++       +
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            + Y+ +I   C   K+D+A ++F  M   G  P+   +++L+    ++     V+++L 
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLS 739

Query: 400 RMDERN 405
           +M E +
Sbjct: 740 KMLENS 745



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 181/402 (45%), Gaps = 21/402 (5%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK FG +P  +TY+ L+    R      A  +  EM     E G+    D         
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREM----SELGL--SMDEFTLGFFAQ 284

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   K +E L  ++ ++  P+ + YN +I G C A+   EA      M      P
Sbjct: 285 ALCKVG---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV T+ +++       ++    ++L +MI  G  P+  ++N+L+  +C +   + A +L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------YSEMLSKGI---KPTVVTYN 239
             ME   CK     Y+ILI   C   E+ G ++       Y+EMLS G    K  VV++ 
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
               G     + E+A+K+  EM  +G   DT  Y   I  LC    +  A  LF+ ++  
Sbjct: 462 RCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+ +Y+ LID   K+G +K A      + R      VVTY  +IHA     K+  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++LF  M AKG  P+ + +  L+ G  ++    K  ++  RM
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 49/329 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------------------ 55
           GCEPN I Y  LI+G C+      A  +F +M+       V                   
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 734

Query: 56  -----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                      C P+ VIYT +IDGL K    D+A +L+L M++K   P+VVTY ++I G
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           F  A   ++   LF EM  +G  PN VT++V+++  C  G ++EA  LLE M Q     +
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSM------ESMGCKHNVFSYSILINGYCKNKEIEG 218
              Y  +++G+         +E  +S+      E  G    +  Y +LI+ + K   +E 
Sbjct: 855 VSSYCKVIEGY--------KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEV 906

Query: 219 ALSLYSEMLSKGIKPTVVT--YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           AL L+ E++S  +        Y +L        ++  AF+LF +M R GV  D   +   
Sbjct: 907 ALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHL 966

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDI 305
           + GL +     EAL+L  +L    C++DI
Sbjct: 967 LMGLIRVRRWEEALQLSDSL----CQMDI 991



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 28/335 (8%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I   C+ G  + A E L ++KD    P  +TYN++++ F  A+  + A+ +  EM + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +  +  T       LCK GK  EA  L+E   +    PN  +YN ++ G C       A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +    M S  C  NV +Y IL+ G    K++     + S M+++G  P+   +N+L    
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +      A+KL  +M++         Y   I  +C  G +   +           EL  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTF---------ELAE 439

Query: 306 RSYSCLIDG---------------LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ++Y+ ++                 LC  G+ + A+++ H +     + D  TY+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           C   +++ A  LF +M+  GV PD   + T+++ C
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTY-TILIDC 533



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 55/267 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++  GC+PNV+TY+ +I+G  + G     L LF EM    G  G  C P+ V
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM----GSKG--CAPNFV 821

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI-- 119
            YT +I+  C  G +D+A  LL +MK       V +Y  VI G+         KR FI  
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY---------KREFILS 872

Query: 120 -----EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                E+   G  P ++ + V++D   K G++E A +L                      
Sbjct: 873 LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALEL---------------------- 910

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
                     KE+  +  SM  K N+  Y+ LI  +    +I  A  L+ +M+  G+ P 
Sbjct: 911 ---------HKEVISASMSMAAKKNL--YTSLIYSFSYASKIGHAFELFYDMIRDGVIPD 959

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEM 261
           + T+  L +GL  + + E A +L D +
Sbjct: 960 LGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 7/248 (2%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS--YSILINGYCKNKE 215
           QIG      VY  L+D F   G  +R  E F+  E  G    V     ++LI   C+N  
Sbjct: 164 QIGYDHTPAVYIALLDVF-ERGSYDRVPEEFLR-EIRGDDKEVLGKLLNVLIRKCCRNGL 221

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL     +   G KPT +TYN L        +++ A  +  EM   G++ D +    
Sbjct: 222 WNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGF 281

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           F   LCK G   EAL L      +    +   Y+ +I GLC++   + A +  + +    
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVP---NTILYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I +V TY I++       ++ +   +   M A+G  P    FN+L+    ++++ S   
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 396 ELLHRMDE 403
           +LL +M++
Sbjct: 399 KLLKKMEK 406


>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
 gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
          Length = 388

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 200/389 (51%), Gaps = 13/389 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+ +++++NG  R GH   AL     M          C PD V Y T+ID   K    
Sbjct: 9   PNVVIFNSVVNGFARAGHLDGALGTLRMMRKAG------CNPDEVTYNTLIDVFHKLERF 62

Query: 77  DKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           D A+ELL QM D  I P V+  TYN+VI  FC   +  +AK +   M+D G +P+VVT++
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LCK   +  A   L+LM ++   PN   YNT+++G   + +   A+ L   M S+
Sbjct: 123 TLISGLCK---LRRADDALQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  +V +Y+ +I   C+++E+E A+ ++  M  K  +   VT+ TL  G     ++E A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDA 239

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
               D M R G+ +D  +Y   ++ LC  G   +A E+F  +        + SY+ L+ G
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+ R++ A  LF  +    +  DVV+Y  +I  LCA  ++D+A DLF D     + P+
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRD--PSFLEPN 357

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +   TL +G  ++        +  R D+
Sbjct: 358 DITHETLRIGLEKSGRLEDYSSVTGRKDQ 386



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 5/350 (1%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G    P+ VI+ ++++G  + G +D A   L  M+    NPD VTYN++I  F      
Sbjct: 3   LGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLERF 62

Query: 112 NEAKRLFIEMMDQGVQPNVV--TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           + A+ L  +M D G++P V+  T++ ++   C+   + +A  +LELMI  G +P+   YN
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+ G C   R + A +L   ME      N  +Y+ +ING  ++++   A +L  EM+S 
Sbjct: 123 TLISGLCKLRRADDALQLMREMEP---APNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G   +V TYN +   L    ++E+A  +F  M++    AD   + T +DG  ++  + +A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDA 239

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                 +       D++SY+ L++ LC  G  + A E+F+ +        +V+YN+++  
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LC   +++ A  LF +M+ + + PD V++ T++ G        + ++L  
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFR 349



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 5/316 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P+VV +NSV+ GF  A   + A      M   G  P+ VT++ ++D   K  + + A 
Sbjct: 7   VAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLERFDSAR 66

Query: 151 QLLELMIQIGVRPN--AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           +LLE M   G+RP   A  YN ++  FC    V +AK +   M   GCK +V +Y+ LI+
Sbjct: 67  ELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLIS 126

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK +  + AL L  EM      P  +TYNT+  GL+   +   A  L DEM   G   
Sbjct: 127 GLCKLRRADDALQLMREMEPA---PNTITYNTVINGLWRSRKDTEAQALLDEMISVGCPF 183

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
               Y   I  LC++  + +A+++F  +R  KCE D  +++ L+DG  +  RL+ A    
Sbjct: 184 SVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDAGGTL 243

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + R  + +DV +Y  +++ALC  G   KA ++F  M  +G AP  V++N L+ G  + 
Sbjct: 244 DWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKA 303

Query: 389 NETSKVVELLHRMDER 404
                 + L   M ER
Sbjct: 304 LRVEHALVLFREMQER 319



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 163/322 (50%), Gaps = 13/322 (4%)

Query: 3   AAALFTKLKAFGCEPNVI--TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           A  L  ++   G  P V+  TY+ +I   C   +   A  + E MI+        CKPD 
Sbjct: 65  ARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSG------CKPDV 118

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLCK    D A +L+ +M+     P+ +TYN+VI G   +    EA+ L  E
Sbjct: 119 VTYNTLISGLCKLRRADDALQLMREMEPA---PNTITYNTVINGLWRSRKDTEAQALLDE 175

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G   +V T++ ++  LC++ +ME+A  +   M +     +   + TL+DGF    R
Sbjct: 176 MISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKR 235

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A      M   G   +V SY+ L+N  C     + A  +++ M+ +G  PT+V+YN 
Sbjct: 236 LEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNV 295

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +VE A  LF EMQ   +  D  +Y T I GLC    I EA++LFR    L+
Sbjct: 296 LLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDPSFLE 355

Query: 301 CELDIRSYSCLIDGLCKSGRLK 322
              DI ++  L  GL KSGRL+
Sbjct: 356 PN-DI-THETLRIGLEKSGRLE 375



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ + GC  +V TY+ +I  LCR+     A+++F  M          C+ D V
Sbjct: 168 EAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKK------CEADEV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++DG  ++  ++ A   L  M    I  DV +Y  ++   C    + +A  +F  M
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P +V+++V++  LCK  ++E A  L   M +  ++P+   Y T++ G C   R+
Sbjct: 282 VDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRI 341

Query: 182 NRAKELF 188
           + A +LF
Sbjct: 342 DEAIDLF 348



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 10/105 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  P +++Y+ L+ GLC+      AL LF EM           +PD V
Sbjct: 273 KACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQERE------IQPDVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGF 105
            YTT+I GLC    +D+A +L    +D + + P+ +T+ ++  G 
Sbjct: 327 SYTTVIKGLCAARRIDEAIDLF---RDPSFLEPNDITHETLRIGL 368


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 216/422 (51%), Gaps = 42/422 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   ++ ++ A   +P+VITY  LI+GLCR+G    A  ++ E+I    + G+V   DA 
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII----KTGLVI--DAA 335

Query: 62  IYTTIIDGLCK----------------------------------EGFVDKAKELL-LQM 86
           +Y +++ G C+                                   G VD+A EL  L  
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           KD    PD VT+ ++I G C    +N+A  +F E    G Q +V ++S +++ LC  G++
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A ++ E M + G +PN+ +YN L+ GFC   R + A  ++  M   GC   V +Y+ L
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK ++ + A S+  EM+  G  P + TY +L  GLF   +++ A  ++ ++   G+
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAW 325
             D   +   I GLC  G + EAL +F  ++  K C  ++ +Y+ L+DGL ++G +  A 
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L+ S+    L  D+++YN  I  LC+  ++ +   L  ++ ++G+ P  + +N L+   
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695

Query: 386 IR 387
           I+
Sbjct: 696 IK 697



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 42/431 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PN+ TY+ +++GLC+ G       ++E M+  N       +PD + Y  +I G
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHG 308

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE--------- 120
           LC+ G VD A  +  ++    +  D   YNS+++GFC A    EA + +           
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 121 --------------MMDQGVQ------------PNVVTFSVIMDELCKNGKMEEASQLLE 154
                         M+D+ ++            P+ VTF  ++  LC+NG   +A  + E
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
                G + + F Y+++++G C  GR+  A +++  M+  GCK N   Y+ LI+G+C+  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
               A+ +YS+M   G  PTV+TYNTL  GL +  + + A  +  EM  +G   D   Y 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-R 333
           + I GL  +  I +AL +++ +     ++D+  ++ LI GLC +G++  A  +F  +  +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                ++VTYN ++  L   G +DKA  L+  +   G+ PD +++NT + G    +   +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 394 VVELLHRMDER 404
            ++LL  +  R
Sbjct: 669 GIQLLDEVLSR 679



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 229/476 (48%), Gaps = 82/476 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  L+     P+ ITYSTL+ GL +      AL+L +EM           +PD V
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSR------VQPDVV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  ++ G  K G  +K   +  ++ KD    P++ TYN ++ G C      E   ++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   +QP+V+T+ +++  LC++G ++ A+++   +I+ G+  +A +YN+L+ GFC  GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PTVVTY 238
           V  A + + S    G + N+ +Y+I+I G   +  ++ A+ L+ ++L K +   P  VT+
Sbjct: 350 VQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTF 407

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL-------- 290
            TL  GL +     +AF +F+E +  G   D ++Y + I+GLC  G +V+A+        
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467

Query: 291 ------------------ELFRT---LRILK------CELDIRSYSCLIDGLCKSGRLK- 322
                             +++RT   +RI        C   + +Y+ LIDGLCK+ + + 
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527

Query: 323 ---IAWEL-----------FHSLPRGV--------------------LIADVVTYNIMIH 348
              +A E+           + SL RG+                    L  DV+ +NI+IH
Sbjct: 528 ASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIH 587

Query: 349 ALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LC+ GK+D+A  +F DM E K   P+ V +NTLM G        K   L   + E
Sbjct: 588 GLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 41/442 (9%)

Query: 1   MEAAAL--FTKLKA-FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           M  AAL  F  L +  GC P + +++ L++   R      A   F  +   +G FG    
Sbjct: 98  MPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASL--SHGAFGRRIA 155

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  ++  LC  G +D+A  L   ++ + + PD +TY++++ G    +  + A  L
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFC 176
             EM    VQP+VV ++ ++    K G+ E+  ++ + +++  G RPN   YN ++DG C
Sbjct: 216 LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR     E++  M +   + +V +Y ILI+G C++ +++GA  +YSE++  G+     
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVA----------------------------- 267
            YN+L  G  +  +V+ A+K +D     G+                              
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 268 ------ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
                  DT  + T I GLC+NG+  +A  +F   R+   +LD+ SYS +I+GLC  GRL
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +++  + +     +   YN +I   C   +   A  ++  M   G +P  + +NTL
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G  +  +  +   +   M E
Sbjct: 516 IDGLCKAEKYQEASSVAREMVE 537



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 154/286 (53%), Gaps = 7/286 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F + +  G + +V +YS++INGLC  G  + A+ ++E+M + +G     CKP++ 
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM-DKDG-----CKPNSH 475

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +I G C+      A  +  +M D   +P V+TYN++I G C A    EA  +  EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ T+  ++  L  + K+++A  + + ++  G++ +  ++N L+ G C  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A  +F  M E   C  N+ +Y+ L++G  +   I+ A +L++ +   G++P +++YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              GL    ++    +L DE+   G+      +   +  + K G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 7/253 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  ++ K+   GC+PN   Y+ LI+G C+   T  A+ ++ +M + NG     C P  
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NG-----CSPTV 509

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+IDGLCK     +A  +  +M +    PD+ TY S+IRG       ++A  ++ +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTG 179
           ++ +G++ +V+  ++++  LC  GK++EA  +   M +     PN   YNTLMDG   TG
Sbjct: 570 ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETG 629

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +++A  L+ S+   G + ++ SY+  I G C    I   + L  E+LS+GI PTV+T+N
Sbjct: 630 YIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 240 TLFIGLFEIHQVE 252
            L   + +   ++
Sbjct: 690 ILVRAVIKYGPIQ 702


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 174/314 (55%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A+F  +K +G  P+V +YS LI+GL + G      ++F  M      F +    DA  Y 
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG--FAL----DARAYN 605

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++DG CK G +DKA E+L +MK K + P V TY S+I G    +  +EA  LF E   +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 665

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ +S ++D   K G+++EA  +LE M++ G+ PN + +N+LMD       +N A
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA 725

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P VVTY T+  G
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++  +  A  LF+  + +G   D  ++   I+G+      +EA  +F   R+  C ++
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN 845

Query: 305 IRSYSCLIDGLCKS 318
           +++   L+D L K+
Sbjct: 846 VKACISLLDALNKA 859



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 206/401 (51%), Gaps = 9/401 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F      GC PN +TY +LI+GL + G+   A  LFE M++           + V+
Sbjct: 445 AYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH------NANPVV 498

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT++I      G  +   ++  +M  +   PD+   N+ +     A D  + + +F ++ 
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+V ++S+++  L K G+  E S +   M Q G   +A  YN ++DGFC +G+++
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A E+   M+       V +Y  +I+G  K   ++ A  L+ E  SKGI+  V+ Y++L 
Sbjct: 619 KAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLI 678

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++ +++ A+ + +EM + G+  + + + + +D L K   I EAL  F++++ +KC 
Sbjct: 679 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCS 738

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +YS LI+GLC+  +   A+  +  + +  L+ +VVTY  MI  L   G +  A  L
Sbjct: 739 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSL 798

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F   +A G  PD  +FN L+ G    N   + +E  H  +E
Sbjct: 799 FERFKANGGTPDAASFNALIEGMSHAN---RAIEAYHVFEE 836



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 200/401 (49%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +LK  GC P+V+++++++  L +      AL LFE M           +P++  
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-------AEPNSST 393

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  IID LC  G V++A  +  +M+   + P+++T N ++   C A     A  +F    
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN VT+  ++D L K G +++A +L E M+  G   N  VY +L+  F + GR  
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              ++F  M   GC+ ++   +  ++   K  ++E   +++ ++   G  P V +Y+ L 
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   +++ +  
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y  +IDGL K  RL  A+ LF       +  +V+ Y+ +I      G++D+A+ +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +M  KG+ P+   +N+LM   ++  E ++ +     M E
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKE 734



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 185/381 (48%), Gaps = 7/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   ++     P    Y+ LI  +        AL L  +M     E GV       
Sbjct: 165 DAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVP------ 218

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT++  L +EG V+ A  L+ ++K   + PD+V YN  I  F  A + + A + F E+
Sbjct: 219 LFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 278

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG++P+ V+++ ++  LCK G++ EA +L   M      P A+ YNT++ G+   G+ 
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQF 338

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   ++  GC  +V S++ ++    K ++++ AL+L+ E + K  +P   TYN +
Sbjct: 339 ENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNII 397

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    +VE A+ + DEM+  G+  +       +D LCK      A E+F T     C
Sbjct: 398 IDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGC 457

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  LIDGL K G +  A+ LF ++      A+ V Y  +I      G+ +  H 
Sbjct: 458 NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHK 517

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           +F +M  +G  PD    NT M
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYM 538



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 158/336 (47%), Gaps = 1/336 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++  L +   +D A+ ++  M+     P    Y  +I     A     A  L  +M + G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +  V  F+ ++  L + G++E A  L++ +    + P+  +YN  +D F   G V+ A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           + F  ++S G K +  SY+ +I   CK   +  A  L+ +M ++   P    YNT+ +G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               Q E A+KL D+++  G      ++ + +  L K   + EAL LF  ++    E + 
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNS 391

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +ID LC +G+++ A+ +   +    L  +++T NIM+  LC   K + A+++F  
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +G  P+ V + +L+ G  +         L   M
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM 487



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 7/224 (3%)

Query: 188 FVSMESMGCKHNVFSYSI-------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +ME +  + +V  Y +       L++   + + ++ A  + + M     +P    Y  
Sbjct: 128 LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTV 187

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   + E  Q ERA +L  +MQ  G       + T +  L + G +  AL L   ++   
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E DI  Y+  ID   K+G + +AW+ FH L    L  D V+Y  MI  LC  G++ +A 
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAE 307

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +LF  ME +   P   A+NT+++G     +     +LL ++ ER
Sbjct: 308 ELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 6/149 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K   C PN  TYS LINGLCR      A   ++EM     + G+V  P+ V
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM----QKQGLV--PNVV 777

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GL K G +  A  L  + K     PD  ++N++I G  +AN + EA  +F E 
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEET 837

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             +G + NV     ++D L K   +E+A+
Sbjct: 838 RLKGCRINVKACISLLDALNKAECLEQAA 866


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 216/422 (51%), Gaps = 42/422 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   ++ ++ A   +P+VITY  LI+GLCR+G    A  ++ E+I    + G+V   DA 
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII----KTGLVI--DAA 335

Query: 62  IYTTIIDGLCK----------------------------------EGFVDKAKELL-LQM 86
           +Y +++ G C+                                   G VD+A EL  L  
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           KD    PD VT+ ++I G C    +N+A  +F E    G Q +V ++S +++ LC  G++
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A ++ E M + G +PN+ +YN L+ GFC   R + A  ++  M   GC   V +Y+ L
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK ++ + A S+  EM+  G  P + TY +L  GLF   +++ A  ++ ++   G+
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAW 325
             D   +   I GLC  G + EAL +F  ++  K C  ++ +Y+ L+DGL ++G +  A 
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L+ S+    L  D+++YN  I  LC+  ++ +   L  ++ ++G+ P  + +N L+   
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAV 695

Query: 386 IR 387
           I+
Sbjct: 696 IK 697



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 42/431 (9%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PN+ TY+ +++GLC+ G       ++E M+  N       +PD + Y  +I G
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHG 308

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE--------- 120
           LC+ G VD A  +  ++    +  D   YNS+++GFC A    EA + +           
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNL 368

Query: 121 --------------MMDQGVQ------------PNVVTFSVIMDELCKNGKMEEASQLLE 154
                         M+D+ ++            P+ VTF  ++  LC+NG   +A  + E
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
                G + + F Y+++++G C  GR+  A +++  M+  GCK N   Y+ LI+G+C+  
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
               A+ +YS+M   G  PTV+TYNTL  GL +  + + A  +  EM  +G   D   Y 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-R 333
           + I GL  +  I +AL +++ +     ++D+  ++ LI GLC +G++  A  +F  +  +
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                ++VTYN ++  L   G +DKA  L+  +   G+ PD +++NT + G    +   +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 394 VVELLHRMDER 404
            ++LL  +  R
Sbjct: 669 GIQLLDEVLSR 679



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 206/406 (50%), Gaps = 8/406 (1%)

Query: 1   MEAAAL--FTKLKA-FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK 57
           M  AAL  F  L +  GC P + +++ L++   R      A   F  +   +G FG    
Sbjct: 98  MPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASL--SHGAFGRRIA 155

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  ++  LC  G +D+A  L   ++ + + PD +TY++++ G    +  + A  L
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDL 215

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFC 176
             EM   GVQP+VV ++ ++    K G+ E+  ++ + +++  G RPN   YN ++DG C
Sbjct: 216 LDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             GR     E++  M +   + +V +Y ILI+G C++ +++GA  +YSE++  G+     
Sbjct: 276 KFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAA 335

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN+L  G  +  +V+ A+K +D     G+  +   Y   I GL  +G + EA+EL+  L
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 297 -RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
            + + C  D  ++  LI GLC++G    A+ +F          DV +Y+ MI+ LC  G+
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  A  ++  M+  G  P+   +N L+ G  +   TS  V +  +M
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 231/476 (48%), Gaps = 82/476 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  L+     P+ ITYSTL+ GL +      AL+L +EM       GV  +PD V
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRS----GV--QPDVV 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  ++ G  K G  +K   +  ++ KD    P++ TYN ++ G C      E   ++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   +QP+V+T+ +++  LC++G ++ A+++   +I+ G+  +A +YN+L+ GFC  GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PTVVTY 238
           V  A + + S    G + N+ +Y+I+I G   +  ++ A+ L+ ++L K +   P  VT+
Sbjct: 350 VQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTF 407

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL-------- 290
            TL  GL +     +AF +F+E +  G   D ++Y + I+GLC  G +V+A+        
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467

Query: 291 ------------------ELFRT---LRILK------CELDIRSYSCLIDGLCKSGRLK- 322
                             +++RT   +RI        C   + +Y+ LIDGLCK+ + + 
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527

Query: 323 ---IAWEL-----------FHSLPRGV--------------------LIADVVTYNIMIH 348
              +A E+           + SL RG+                    L  DV+ +NI+IH
Sbjct: 528 ASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIH 587

Query: 349 ALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LC+ GK+D+A  +F DM E K   P+ V +NTLM G        K   L   + E
Sbjct: 588 GLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 154/286 (53%), Gaps = 7/286 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F + +  G + +V +YS++INGLC  G  + A+ ++E+M + +G     CKP++ 
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM-DKDG-----CKPNSH 475

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  +I G C+      A  +  +M D   +P V+TYN++I G C A    EA  +  EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ T+  ++  L  + K+++A  + + ++  G++ +  ++N L+ G C  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A  +F  M E   C  N+ +Y+ L++G  +   I+ A +L++ +   G++P +++YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              GL    ++    +L DE+   G+      +   +  + K G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 7/253 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  ++ K+   GC+PN   Y+ LI+G C+   T  A+ ++ +M + NG     C P  
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NG-----CSPTV 509

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+IDGLCK     +A  +  +M +    PD+ TY S+IRG       ++A  ++ +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFCLTG 179
           ++ +G++ +V+  ++++  LC  GK++EA  +   M +     PN   YNTLMDG   TG
Sbjct: 570 ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETG 629

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            +++A  L+ S+   G + ++ SY+  I G C    I   + L  E+LS+GI PTV+T+N
Sbjct: 630 YIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 240 TLFIGLFEIHQVE 252
            L   + +   ++
Sbjct: 690 ILVRAVIKYGPIQ 702


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 6/377 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN +TY+T+I G C  G    AL++  EM    G       P+   Y T+I G CK G V
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 124

Query: 77  DKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           D+A ++  +M  K  + P+ V YN++I G+C     + A      M+++GV   V T+++
Sbjct: 125 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  L  +G+  EA +L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+P +V YN L         ++RAF
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+ +Y+ LI G 
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
              G +K A  + + +        ++TYN +I  LC +G+ D A ++  +M   G+ PD 
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 424

Query: 376 VAFNTLMLGCIRNNETS 392
             + +L+ G    +E +
Sbjct: 425 STYISLIEGLTTEDERA 441



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 199/403 (49%), Gaps = 12/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF  +          T++ ++  LC  G    AL L  +M           +P+AV 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------PRPNAVT 74

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           Y T+I G C  G V  A +++ +M+++  I P+  TY +VI G+C     +EA ++F EM
Sbjct: 75  YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +G V+P  V ++ ++   C  GK++ A    + M++ GV      YN L+    + GR
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++ TVVTY +
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   +   +
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ L+ GLC  GR+  A +L   + +  +  D+VTYN +I      G +  A 
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  +M  KG  P  + +N L+ G  +N +      ++  M E
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V TY+ LING C+ G+   AL +FE M       GV  +   V
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM----SRRGV--RATVV 250

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  L K+G V +  +L  +   + I PD+V YN++I     + + + A  +  EM
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M  LC  G+++EA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI P   TY +L
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430

Query: 242 FIGL 245
             GL
Sbjct: 431 IEGL 434


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 215/434 (49%), Gaps = 53/434 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ A    PN  TY+ LI G C+ G    A+++F +M +     G++  P+A 
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS----GLL--PNAS 61

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              T++ GLC+ G +  A +L  +M+     P   ++N ++RGF  A  + E    F EM
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEM 118

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV+P++ ++ +++  L  +G+M EA  L   M      P+   YN LMDG+C  G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 175

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L   +   G + NVF+YSI+IN YCK  ++E A  ++ +M+     P  VT+NTL
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEALELFRT----- 295
             G  +   +E A KLF EM++ G  A    Y T ID LCK  G +  A++LF       
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 296 ----------------------LRIL------KCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                                 LR+L       C+ D+ +Y+CLI GLC + R++ A  L
Sbjct: 296 LTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F+ +       +V T+N +I  LCA  K+++A ++   M     APD   FNT++L   +
Sbjct: 356 FNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCK 408

Query: 388 NNETSKVVELLHRM 401
                   E++  M
Sbjct: 409 AGAMHDAREVMKDM 422



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 197/402 (49%), Gaps = 43/402 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           +A ++F+ +K+ G  PN  T +TL+ GLC  G    AL LF EM  G             
Sbjct: 43  QAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILL 102

Query: 49  NGEF---------------GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            G F               GV  +PD   Y  ++  L   G + +A  L   M     +P
Sbjct: 103 RGFFMAGRAIEFFKEMKASGV--EPDLESYHILLSALSDSGRMAEAHALFSAM---TCSP 157

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D++TYN ++ G+C    + EA+ L  E++  G +PNV T+S+I++  CK  K+EEA ++ 
Sbjct: 158 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 217

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             MI+    PNA  +NTL+ GFC  G +  A +LF  ME +GCK  + +Y+ LI+  CK 
Sbjct: 218 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 277

Query: 214 K-EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  +  A+ L++++   G+ PT+VTYN+L  G  E  +     +L   M   G   D   
Sbjct: 278 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVIT 335

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I GLC    + +A  LF     + C  ++ +++ LI GLC   +++ A  +   + 
Sbjct: 336 YNCLISGLCSANRVEDAQRLFNG---MACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT 392

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
                 D+ T+N +I A C  G M  A ++  DM   G  P+
Sbjct: 393 ----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 150/308 (48%), Gaps = 40/308 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ALF+   A  C P+++TY+ L++G C+ G T  A +L +E++    E      P+  
Sbjct: 145 EAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVF 195

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ II+  CK   V++A E+ ++M + N  P+ VT+N++I GFC A    +A +LF EM
Sbjct: 196 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 255

Query: 122 MDQGVQPNVVTFSVIMDELCKN-GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              G +  +VT++ ++D LCK  G +  A  L   +   G+ P    YN+L+ GF  + R
Sbjct: 256 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SER 313

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-------------- 226
            N    L   M + GCK +V +Y+ LI+G C    +E A  L++ M              
Sbjct: 314 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTTFNFLIR 373

Query: 227 --------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                         L +   P + T+NT+ +   +   +  A ++  +M +HG   +T+ 
Sbjct: 374 GLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433

Query: 273 YRTFIDGL 280
                 G+
Sbjct: 434 TYALAHGI 441



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 7/296 (2%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A   ++A RLF E++     PN  T++V++   CK G+M +A  +   M   G+ PNA  
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            NTL+ G C  G+++ A +LF  M++        S++IL+ G+        A+  + EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           + G++P + +Y+ L   L +  ++  A  LF  M     + D   Y   +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           EA  L + +     E ++ +YS +I+  CK  +++ AWE+F  +     + + VT+N +I
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMD 402
              C  G ++ A  LF +ME  G     V +NTL+   C +       V+L ++++
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 292



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 6/259 (2%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K ++A +L + ++     PNA  YN L+ GFC  G++++A  +F  M+S G   N  + +
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L+ G C+  ++  AL L+ EM +    PT  ++N L  G F      RA + F EM+  
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF---MAGRAIEFFKEMKAS 121

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  D  +Y   +  L  +G + EA  LF  +    C  DI +Y+ L+DG CK G+   A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   + +     +V TY+I+I+  C   K+++A ++F+ M      P+ V FNTL+ G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 385 CIRNNETSKVVELLHRMDE 403
             +       ++L   M++
Sbjct: 239 FCKAGMLEDAIKLFAEMEK 257



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 47/247 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+    C PN +T++TLI G C+ G    A+ LF EM        + CK   V
Sbjct: 212 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK------IGCKATIV 265

Query: 62  IYTTIIDGLCK-------------------------------EGFVDKAKE---LLLQMK 87
            Y T+ID LCK                               +GF ++A +   LL  M 
Sbjct: 266 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMH 325

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
            +   PDV+TYN +I G C AN   +A+RLF  M      PNV TF+ ++  LC   K+E
Sbjct: 326 AEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVE 382

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  +L+ M      P+   +NT++  FC  G ++ A+E+   M   G   N ++   L 
Sbjct: 383 EARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438

Query: 208 NGYCKNK 214
           +G   +K
Sbjct: 439 HGIQSSK 445



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N  +Y++LI G+CK  ++  A+S++S+M S G+ P   T NTL +GL EI Q+  A KLF
Sbjct: 24  NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF 83

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EMQ       + ++   + G    G    A+E F+ ++    E D+ SY  L+  L  S
Sbjct: 84  REMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDS 140

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR+  A  LF ++       D++TYN+++   C  G+  +A  L  ++   G  P+   +
Sbjct: 141 GRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTY 197

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           + ++    + ++  +  E+  +M E N
Sbjct: 198 SIIINCYCKLDKVEEAWEVFMKMIESN 224


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 183/327 (55%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   +  ++  LCKE  +++A+ L  ++  + + P VV++N++I G+C + + ++  RL
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              MM+  V P+V T+SV+++ LCK G++++A++L   M   G+ PN   + TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           TGR +   E++  M   G K +V +Y+ LING CK  ++  A  L  EM  +G+KP   T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G  +   +E A ++  EM + G+  D  A+   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  +Y+ +I G CK G +K  ++L   +     +  VVTYN++++ LC  G+M 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            A+ L   M   GV PD + +N L+ G
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILLEG 549



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 202/380 (53%), Gaps = 9/380 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A + ++   G  P+V  ++ L++ LC+      A  LF E+    G+ G+  +P  V 
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVS 262

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+I+G CK G +D+   L   M +  + PDV TY+ +I G C     ++A +LF+EM 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ PN VTF+ +++  C  G+ +   ++ + M++ GV+P+   YNTL++G C  G + 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            AK+L + M   G K + F+Y++LI+G CK  ++E AL +  EM+ +GI+   V +  L 
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     QV  A +   EM   G+  D   Y   I G CK G +    +L + ++     
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ L++GLCK G++K A  L  ++    ++ D +TYNI++   C  G  +    L
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
                 KG+  D  ++ +L+
Sbjct: 563 ---QSEKGLVQDYGSYTSLI 579



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTK-LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            A+++FT  L+A G   + + +S L+N    +G+   A+  F  +   N +        +
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HS 192

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  + D L K      A     ++ D    PDV  +N ++   C  +  NEA+ LF E
Sbjct: 193 CGY--LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++P VV+F+ +++  CK+G +++  +L   M++  V P+ F Y+ L++G C  G+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +LF+ M   G   N  +++ LING+C     +  + +Y +ML KG+KP V+TYNT
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++  +  A KL  EM + G+  D + Y   IDG CK G +  ALE+ + +    
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            ELD  +++ LI G C+ G++  A      +    +  D  TY ++IH  C  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M+  G  P  V +N L+ G  +  +      LL  M
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 174/318 (54%), Gaps = 6/318 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G  P V++++TLING C++G+      L   M+  N  F     PD  
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVF 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLCKEG +D A +L L+M D+ + P+ VT+ ++I G C    ++    ++ +M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+P+V+T++ +++ LCK G + EA +L+  M Q G++P+ F Y  L+DG C  G +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M   G + +  +++ LI+G+C+  ++  A     EML  GIKP   TY  +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 302 ELDIRSYSCLIDGLCKSG 319
             D  +Y+ L++G CK G
Sbjct: 537 VPDDITYNILLEGHCKHG 554



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 17/358 (4%)

Query: 63  YTTIIDGLCKEGFVDKAKELL---LQMKDKNINPDVVTYNSVIRGFCYAN---------- 109
           Y T+   LC    + +A+ LL   +  K KN    V T     RG   +N          
Sbjct: 106 YCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAY 165

Query: 110 -DS---NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
            DS   ++A + F  +    +Q    +   + D L K      A    E ++  G  P+ 
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             +N LM   C   ++N A+ LF  +   G +  V S++ LINGYCK+  ++    L   
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+   + P V TY+ L  GL +  Q++ A KLF EM   G+  +   + T I+G C  G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
               +E+++ +     + D+ +Y+ LI+GLCK G L+ A +L   + +  L  D  TY +
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I   C +G ++ A ++  +M  +G+  D VAF  L+ G  R  +  +    L  M E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + GK   +S    ++   G   +  V++ LM+ +  +G  + A + F  +     +    
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S   L +   K      A + Y E+L  G  P V  +N L   L + H++  A  LF E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + G+     ++ T I+G CK+G + +   L R +   +   D+ +YS LI+GLCK G+L
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +LF  +    L+ + VT+  +I+  C  G+ D   +++  M  KGV PD + +NTL
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +  +  +  +L+  M +R
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQR 394



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA     ++   G +P+  TY+ +I+G C+ G       L +EM   +G       P  
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM-QCDGHV-----PGV 505

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +++GLCK+G +  A  LL  M +  + PD +TYN ++ G C   +  +  +L  E
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEE 148
              +G+  +  +++ ++ +L K  K  +
Sbjct: 566 ---KGLVQDYGSYTSLIGDLRKTCKERQ 590


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 185/361 (51%), Gaps = 6/361 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +K  G EPNV+TY+T I   CRT     A +L+EEM+      GV+  PD V 
Sbjct: 255 ARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMV----RMGVL--PDVVT 308

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + ++DGLC+ G   +A  L  +M+     P+ VTY ++I     A   +E+  L  E++
Sbjct: 309 LSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVV 368

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV  ++V ++ +MD L K GK++E   +    +     PN   Y  L+D  C  G V+
Sbjct: 369 SRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVD 428

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++ + ME      NV ++S +ING  K   +  A     +M  +GI P VVTY T+ 
Sbjct: 429 GAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVM 488

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F+  + E A  L+ EM   GV  + +     ++GL KNG + EA  LFR +      
Sbjct: 489 DGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGML 548

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  +Y+ LIDGL K G +  A+++   L    L  D V YN+ ++ LC  GK  +A  +
Sbjct: 549 LDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESI 608

Query: 363 F 363
            
Sbjct: 609 L 609



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 207/439 (47%), Gaps = 41/439 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL  ++   G   + +T +T +  LCR G    A  L E M+ G      + + D V 
Sbjct: 148 APALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGR----EIHRLDVVG 203

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  ++DG CK G ++ A     +M+ + +  DVV YN+++ G C A +++ A+ +   M 
Sbjct: 204 WNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMK 263

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+PNVVT++  + E C+   +++A  L E M+++GV P+    + L+DG C  GR +
Sbjct: 264 GDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFS 323

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----------- 231
            A  LF  ME +G   N  +Y  LI+   K +    +  L  E++S+G+           
Sbjct: 324 EAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLM 383

Query: 232 ------------------------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                    P  VTY  L   L     V+ A ++  EM+   V 
Sbjct: 384 DWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVH 443

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   + + I+GL K G + +A +  R ++    + ++ +Y  ++DG  K    + A +L
Sbjct: 444 PNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDL 503

Query: 328 FHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +H  L  GV +   +  +++++ L  +GKM++A  LF DM  +G+  D V + TL+ G  
Sbjct: 504 YHEMLCEGVEVNKFIV-DLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLF 562

Query: 387 RNNETSKVVELLHRMDERN 405
           +        ++   + ERN
Sbjct: 563 KMGNMPAAFKVGQELTERN 581



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA    K+K  G +PNV+TY T+++G  +      AL+L+ EM+    E       +  
Sbjct: 464 KAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEV------NKF 517

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I   +++GL K G +++A+ L   M  + +  D V Y ++I G     +   A ++  E+
Sbjct: 518 IVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQEL 577

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
            ++ + P+ V ++V ++ LC  GK +EA  +L
Sbjct: 578 TERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609


>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
 gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
          Length = 388

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 202/389 (51%), Gaps = 13/389 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+ +++++NG  R GH   AL     M          C PD V Y T+ID   K    
Sbjct: 9   PNVVIFNSVVNGFARAGHLDGALGTLRMMRKAG------CDPDEVTYNTLIDVFHKLERF 62

Query: 77  DKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           D A+ELL QM D  I P V+  TYN+VI  FC   +  +AK +   M+D G +P+VVT++
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            ++  LCK  + ++A   L+LM ++   PN   YNT+++G   + +   A+ L   M S+
Sbjct: 123 TLISGLCKVRRADDA---LQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  +V +Y+ +I   C+++E+E A+ ++  M  K  +   VT+ TL  G     ++E A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDA 239

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
               D M R G+ +D  +Y   ++ LC  G   +A E+F  +        + SY+ L+ G
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+ R++ A  LF  +    +  DVV+Y  +I  LCA  ++D+A DLF D     + P+
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDTSF--LEPN 357

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +   TL +G  ++        +  R D+
Sbjct: 358 DITHETLRIGLEKSGRLEDYSSVTGRKDQ 386



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 179/350 (51%), Gaps = 5/350 (1%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
            G    P+ VI+ ++++G  + G +D A   L  M+    +PD VTYN++I  F      
Sbjct: 3   LGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLERF 62

Query: 112 NEAKRLFIEMMDQGVQPNVV--TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           + A+ L  +M D G++P V+  T++ ++   C+   + +A  +LELMI  G +P+   YN
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+ G C   +V RA +    M  M    N  +Y+ +ING  ++++   A +L  EM+S 
Sbjct: 123 TLISGLC---KVRRADDALQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G   +V TYN +   L    ++E+A  +F  M++     D   + T +DG  ++  + +A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDA 239

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                 +       D++SY+ L++ LC  G  + A E+F+ +        +V+YN+++  
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           LC   +++ A  LF +M+ + + PD V++ T++ G        + ++L  
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFR 349



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 5/316 (1%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P+VV +NSV+ GF  A   + A      M   G  P+ VT++ ++D   K  + + A 
Sbjct: 7   VAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLERFDSAR 66

Query: 151 QLLELMIQIGVRPN--AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           +LLE M   G+RP   A  YN ++  FC    V +AK +   M   GCK +V +Y+ LI+
Sbjct: 67  ELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYNTLIS 126

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK +  + AL L  EM      P  +TYNT+  GL+   +   A  L DEM   G   
Sbjct: 127 GLCKVRRADDALQLMREMEPA---PNTITYNTVINGLWRSRKDTEAQALLDEMISVGCPF 183

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
               Y   I  LC++  + +A+++F  +R  KCE D  +++ L+DG  +  RL+ A    
Sbjct: 184 SVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDAGGTL 243

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             + R  + +DV +Y  +++ALC  G   KA ++F  M  +G AP  V++N L+ G  + 
Sbjct: 244 DWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKA 303

Query: 389 NETSKVVELLHRMDER 404
                 + L   M ER
Sbjct: 304 LRVEHALVLFREMQER 319



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 163/322 (50%), Gaps = 13/322 (4%)

Query: 3   AAALFTKLKAFGCEPNVI--TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           A  L  ++   G  P V+  TY+ +I   C   +   A  + E MI+        CKPD 
Sbjct: 65  ARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSG------CKPDV 118

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+I GLCK    D A +L+ +M+     P+ +TYN+VI G   +    EA+ L  E
Sbjct: 119 VTYNTLISGLCKVRRADDALQLMREMEPA---PNTITYNTVINGLWRSRKDTEAQALLDE 175

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G   +V T++ ++  LC++ +ME+A  +   M +     +   + TL+DGF    R
Sbjct: 176 MISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKR 235

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A      M   G   +V SY+ L+N  C     + A  +++ M+ +G  PT+V+YN 
Sbjct: 236 LEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNV 295

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  +VE A  LF EMQ   +  D  +Y T I GLC    I EA++LFR    L+
Sbjct: 296 LLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDTSFLE 355

Query: 301 CELDIRSYSCLIDGLCKSGRLK 322
              DI ++  L  GL KSGRL+
Sbjct: 356 PN-DI-THETLRIGLEKSGRLE 375



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++ + GC  +V TY+ +I  LCR+     A+++F  M          C+ D V
Sbjct: 168 EAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKK------CETDEV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++DG  ++  ++ A   L  M    I  DV +Y  ++   C    + +A  +F  M
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P +V+++V++  LCK  ++E A  L   M +  ++P+   Y T++ G C   R+
Sbjct: 282 VDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRI 341

Query: 182 NRAKELF 188
           + A +LF
Sbjct: 342 DEAIDLF 348



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 10/105 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +   G  P +++Y+ L+ GLC+      AL LF EM           +PD V
Sbjct: 273 KACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQERE------IQPDVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGF 105
            YTT+I GLC    +D+A +L    +D + + P+ +T+ ++  G 
Sbjct: 327 SYTTVIKGLCAARRIDEAIDLF---RDTSFLEPNDITHETLRIGL 368


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 203/437 (46%), Gaps = 79/437 (18%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY T++ G+C +G    A N+ +EMI         C+P+ VIYTT+I    +      A 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASG------CRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV----- 135
            +L +MK++ I PD+  YNS+I G   A   +EA+   +EM++ G++PN  T+       
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 136 ------------------------------IMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                                         +++E CK GK+ EA      M+  G+  +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  LM+G     +V+ A+E+F  M   G   +VFSY +LING+ K   ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ +G+ P V+ YN L  G     ++E+A +L DEM   G+  +   Y T IDG CK+G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF---------HSLPRGVL 336
           + EA  LF  +++     D   Y+ L+DG C+   ++ A  +F          + P   L
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772

Query: 337 IADV-----------------------------VTYNIMIHALCADGKMDKAHDLFLDME 367
           I  V                             VTYNIMI  LC +G ++ A +LF  M+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 368 AKGVAPDCVAFNTLMLG 384
              + P  + + +L+ G
Sbjct: 833 NANLMPTVITYTSLLNG 849



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 217/467 (46%), Gaps = 79/467 (16%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A GC PNV+ Y+TLI    +      A+ + +EM     E G+   PD   Y ++I GL 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA--PDIFCYNSLIIGLS 498

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K   +D+A+  L++M +  + P+  TY + I G+  A++   A +   EM + GV PN V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 132 -----------------------------------TFSVIMDELCKNGKMEEASQLLELM 156
                                              T++V+M+ L KN K+++A ++   M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ F Y  L++GF   G + +A  +F  M   G   NV  Y++L+ G+C++ EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  L  EM  KG+ P  VTY T+  G  +   +  AF+LFDEM+  G+  D++ Y T 
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 277 IDGLCKNGYIVEALELFRT-------------------LRILKCELDIR----------- 306
           +DG C+   +  A+ +F T                    +  K EL              
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 307 --------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ +ID LCK G L+ A ELFH +    L+  V+TY  +++     G+  +
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              +F +  A G+ PD + ++ ++   ++   T+K + L+ +M  +N
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 216/461 (46%), Gaps = 64/461 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A +L  ++ + G   +  TYS LI+GL +  +   A  L  EM++              
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 50  ---GEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
               + GV+ K              P A  Y ++I+G C+E  V +  ELL++MK +NI 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
               TY +V++G C + D + A  +  EM+  G +PNVV ++ ++    +N +  +A ++
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI------- 205
           L+ M + G+ P+ F YN+L+ G     R++ A+   V M   G K N F+Y         
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 206 ----------------------------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                                       LIN YCK  ++  A S Y  M+ +GI     T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  GLF+  +V+ A ++F EM+  G+A D ++Y   I+G  K G + +A  +F  + 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++  Y+ L+ G C+SG ++ A EL   +    L  + VTY  +I   C  G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +A  LF +M+ KG+ PD   + TL+ GC R N+  + + + 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 193/371 (52%), Gaps = 13/371 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  PN +  + LIN  C+ G  I A + +  M++  G  G     DA  YT +++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-QGILG-----DAKTYTVLMN 600

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL K   VD A+E+  +M+ K I PDV +Y  +I GF    +  +A  +F EM+++G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+ +++++   C++G++E+A +LL+ M   G+ PNA  Y T++DG+C +G +  A  LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M+  G   + F Y+ L++G C+  ++E A++++     KG   +   +N L   +F+ 
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKF 779

Query: 249 HQVERAFKLFDEM-----QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + E   ++ + +      R G   D   Y   ID LCK G +  A ELF  ++      
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            + +Y+ L++G  K GR    + +F       +  D + Y+++I+A   +G   KA  L 
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898

Query: 364 LDMEAKGVAPD 374
             M AK    D
Sbjct: 899 DQMFAKNAVDD 909



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 188/423 (44%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL--- 70
           G  P   TY  LI+GLC+      A +L  EM       GV    D   Y+ +IDGL   
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSL--DNHTYSLLIDGLLKG 325

Query: 71  --------------------------------CKEGFVDKAKELLLQMKDKNINPDVVTY 98
                                            KEG ++KAK L   M    + P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
            S+I G+C   +  +   L +EM  + +  +  T+  ++  +C +G ++ A  +++ MI 
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RPN  +Y TL+  F    R   A  +   M+  G   ++F Y+ LI G  K K ++ 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A S   EM+  G+KP   TY     G  E  +   A K   EM+  GV  +       I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
             CK G ++EA   +R++       D ++Y+ L++GL K+ ++  A E+F  +    +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DV +Y ++I+     G M KA  +F +M  +G+ P+ + +N L+ G  R+ E  K  ELL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 399 HRM 401
             M
Sbjct: 686 DEM 688



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 52/437 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLF--------EEMINGNGEF----GVVCK---PDAVI 62
           +V TY  LI   CR G+  +  ++            +N +G       ++CK   P    
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDGLCK   ++ AK LL++M    ++ D  TY+ +I G     +++ AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      +   +  + K G ME+A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P VV Y TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------------------- 282
               +  +   A ++  EM+  G+A D + Y + I GL K                    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 283 ----------NGYIVEALELFRTLRILK----CELDIRSYSC--LIDGLCKSGRLKIAWE 326
                     +GYI EA E     + +K    C +      C  LI+  CK G++  A  
Sbjct: 520 PNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            + S+    ++ D  TY ++++ L  + K+D A ++F +M  KG+APD  ++  L+ G  
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 387 RNNETSKVVELLHRMDE 403
           +     K   +   M E
Sbjct: 639 KLGNMQKASSIFDEMVE 655



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 180/395 (45%), Gaps = 51/395 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA + +  +   G   +  TY+ L+NGL +      A  +F EM  G G       PD 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+G  K G + KA  +  +M ++ + P+V+ YN ++ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN VT+  I+D  CK+G + EA +L + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAKELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-----CELDIRSYSCLIDGLC 316
              G+  D   Y   I+   K G   +AL L   +         C+L I +   L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 181/422 (42%), Gaps = 34/422 (8%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-------------DAVI 62
           E  + ++S L   LC  G    AL++ E MI  N     V                D V+
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  + DG   +G++++A  +        + P +     ++      N  +    ++  M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 123 DQGVQPNVVTFSVIMDELCKNGKME---------------------EASQLLELMIQIGV 161
           ++ V  +V T+ +++   C+ G ++                      A +L E MI  G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P  + Y+ L+DG C   R+  AK L V M+S+G   +  +YS+LI+G  K +  + A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM+S GI      Y+     + +   +E+A  LFD M   G+     AY + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +   + +  EL   ++     +   +Y  ++ G+C SG L  A+ +   +       +VV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            Y  +I     + +   A  +  +M+ +G+APD   +N+L++G  +     +    L  M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 402 DE 403
            E
Sbjct: 514 VE 515



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 151/358 (42%), Gaps = 48/358 (13%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEA 149
           INP+VV   SV+R     +D ++    F  +  Q V +  + +FS +  +LC  G  E+A
Sbjct: 60  INPEVVL--SVLRS-KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKA 116

Query: 150 SQLLELMIQ-------------------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++E MI+                   +G   +  ++  L DG+   G +  A  +FV 
Sbjct: 117 LSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA--VFVF 174

Query: 191 MESMGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG---- 244
             SMG +    +    +L++   +   ++    +Y  M+ + +   V TY+ L I     
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 245 ---------LFEIHQ--------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                    LF+  +        V+ A KL + M   G+    + Y   IDGLCK   + 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +A  L   +  L   LD  +YS LIDGL K      A  L H +    +      Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  +G M+KA  LF  M A G+ P   A+ +L+ G  R     +  ELL  M +RN
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           EA  LF ++K  G  P+   Y+TL++G CR      A+ +F                   
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 43  -----------EEMING--NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                       E++N   +G F    KP+ V Y  +ID LCKEG ++ AKEL  QM++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N+ P V+TY S++ G+       E   +F E +  G++P+ + +SVI++   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SQLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  A+++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 190/384 (49%), Gaps = 6/384 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N+ TY+TLIN  C  G    +      ++           PD+  YT+ + G C+ G + 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAG------FAPDSHAYTSFVVGYCRAGLLA 124

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  L + M  +       TY +++ G C A    EA  +F  M   G  P+   ++ ++
Sbjct: 125 HACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMV 184

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC  G+  EA  LL   +  G  PN  VYN L+DG+C  G +  A ++F  M+  GC 
Sbjct: 185 HGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCS 244

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI+G+CK+++++ A+ L+S M+  G+ P VVTY  L  G     Q++ A++L
Sbjct: 245 PNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRL 304

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
              M+  G+  + W     ID LCK+  + EA  L  +L     +++   Y+ LIDGLCK
Sbjct: 305 LQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCK 364

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +GR   A  L  +L     + D  TY+ +I  LC   ++ +A  +  DM  KGV P  V 
Sbjct: 365 AGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVT 424

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +  ++   +R        ++L +M
Sbjct: 425 YTIIIDELVREVGADGSKKILDKM 448



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 192/400 (48%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  +   GC     TY+ L++GLC  G    A+++F  M   +G     C PD  
Sbjct: 125 HACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM-QADG-----CAPDPH 178

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T++ GLC  G   +A+ LL     +   P+VV YN++I G+C   D   A  +F  M
Sbjct: 179 VYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM 238

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV T++ ++   CK+ K++ A  L   M+  G+ PN   Y  L+ G C  G++
Sbjct: 239 DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQL 298

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L  SME+ G   N ++ S+LI+  CK++ +  A  L   ++ KGIK   + Y +L
Sbjct: 299 DCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSL 358

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A +L   +   G   D   Y + IDGLC+   + EA+ +   +     
Sbjct: 359 IDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGV 418

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +    +Y+ +ID L +      + ++   +    +  DV TY I + + C +G+M+ A  
Sbjct: 419 QPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEH 478

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + L M   GV P+ V +N L+ G      TS+       M
Sbjct: 479 MMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHM 518



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 208/438 (47%), Gaps = 59/438 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L +   A G EPNV+ Y+ LI+G C  G   +A+++FE M +NG       C P+ 
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG-------CSPNV 247

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I G CK   +D+A  L  +M D  + P+VVTY ++I+G C     + A RL   
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+ PN  T SV++D LCK+ ++ EA  LL  +IQ G++ N  VY +L+DG C  GR
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  L  ++ S G   +  +YS LI+G C+ KE+  A+ +  +M+ KG++P+ VTY  
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI---------------------DG 279
           +   L      + + K+ D+M   G+  D + Y  F+                      G
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487

Query: 280 LCKN--------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS------- 318
           +C N              G   +A   F+ +    C+ +  SY+ L+  L K        
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547

Query: 319 ---------GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
                      +K    L   + +  L +++  YN  + +LC   ++D+A  L ++M++ 
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607

Query: 370 GVAPDCVAFNTLMLGCIR 387
            + P    + +++  C R
Sbjct: 608 NLTPSEDVYTSIIACCCR 625



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 8/394 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  ++A GC P+   Y+T+++GLC  G T  A  L  + +    E      P+ V
Sbjct: 160 EAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFE------PNVV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +IDG C  G ++ A ++  +M     +P+V TY  +I GFC +   + A  LF  M
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ PNVVT++ ++   C +G+++ A +LL+ M   G+ PN +  + L+D  C   RV
Sbjct: 274 VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERV 333

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L  S+   G K N   Y+ LI+G CK      A  L   ++S+G  P   TY++L
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++  A  + D+M   GV      Y   ID L +      + ++   +     
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + D+ +Y+  +   C  GR++ A   + H +  GV   ++VTYN +I      G   +A 
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV-CPNLVTYNALICGYANLGLTSQAF 512

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
             F  M A G  P+  ++  L+   I+   ++ +
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 203/457 (44%), Gaps = 61/457 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF+++   G  PNV+TY+ LI G C  G    A  L + M N     G+V  P+  
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS----GLV--PNEW 318

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID LCK   V +A+ LL  +  K I  + + Y S+I G C A     A RL   +
Sbjct: 319 TCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+  T+S ++D LC+  ++ EA  +L+ M++ GV+P+   Y  ++D        
Sbjct: 379 VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA 438

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + +K++   M + G K +VF+Y+I +  YC    +E A  +   M+  G+ P +VTYN L
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY----RTFIDGLCKNGYIVEALELFRTLR 297
             G   +    +AF  F  M  +G   +  +Y    R  I     N     ++ +++   
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558

Query: 298 I--------------LKCELDIRSYSCLIDGLCKSGRL---KI----------------- 323
           +              L  E+DI  Y+C +  LC+  RL   KI                 
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDI--YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVY 616

Query: 324 ---------------AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
                          A     S+ +   I  + +Y  +I +LC +G +  A  +F DM +
Sbjct: 617 TSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLS 676

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           K    + +A+  L+ G ++    ++   LL  M+E+N
Sbjct: 677 KEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 22/244 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN++TY+ LI G    G T  A + F+ M+  NG     CKP+   YT ++  L K+
Sbjct: 487 GVCPNLVTYNALICGYANLGLTSQAFSTFKHMV-ANG-----CKPNEESYTVLLRLLIKK 540

Query: 74  GFVDKAKE----------------LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
              +                    LL +M    +  ++  YN  +   C  +  +EAK L
Sbjct: 541 ESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKIL 600

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            IEM    + P+   ++ I+   C+   + EA   ++ M++ G  P    Y  ++   C 
Sbjct: 601 LIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCE 660

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G +  AK++F  M S    +   ++ ILI+G  +   +    SL S M  K  +P+   
Sbjct: 661 EGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDAL 720

Query: 238 YNTL 241
           Y  L
Sbjct: 721 YARL 724



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 6/115 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      +   G  P + +Y  +I+ LC  G    A  +F +M++    +      + +
Sbjct: 631 EALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNY------EEI 684

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            +  +IDGL ++G+V +   LL  M++KN  P    Y  +      AND  E  R
Sbjct: 685 AWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 12/154 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++++    P+   Y+++I   CR      AL   + M+      G +  P   
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS----GYI--PQLE 649

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II  LC+EG +  AK++   M  K  N + + +  +I G        E   L   M
Sbjct: 650 SYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
            ++  +P+   ++ +       GK+ +A+ + E+
Sbjct: 710 EEKNYRPSDALYARL------TGKITDANDIQEI 737


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 203/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F      GC P+ +TY +LI+GL + G    A  LFE+M++           + V
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH------NANPV 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I      G  +   ++  ++  +   PD+   N+ +     A +  + + +F ++
Sbjct: 229 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V ++S+++  L K G+  E S +   M Q G   +A  YN ++DGFC +G+V
Sbjct: 289 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   M+    +  V +Y  +++G  K   ++ A  L+ E  SKGI+  VV Y++L
Sbjct: 349 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +EM + G+  + + + + +D L K   I EAL  F++++ +KC
Sbjct: 409 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L+ +VVTY  MI  L   G +  A+ 
Sbjct: 469 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   +A G  PD  +FN L+ G    N  
Sbjct: 529 LFERFKANGGIPDAASFNALIEGMSNANRA 558



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 195/382 (51%), Gaps = 7/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F +LKA G +P+ ++Y+++I  LC+ G    A  LF +M     E  V C   A  
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM---EAERSVPC---AYA 55

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I G    G  + A +LL +++++   P VV++NS++         +EA  LF E+M
Sbjct: 56  YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 114

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PN  T+++I+D LC  G++EEA ++L+ M    + PN    N ++D  C   ++ 
Sbjct: 115 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 174

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F S    GC  +  +Y  LI+G  K  +++ A  L+ +ML  G     V Y +L 
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 234

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
              F   + E   K+F E+ R G   D     T++D + K G + +   +F  +R     
Sbjct: 235 RNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 294

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+RSYS LI GL K+G+ +    +FH++ +     D   YN ++   C  GK+ KA+++
Sbjct: 295 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 354

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
             +M+ K V P    +  ++ G
Sbjct: 355 LEEMKEKCVQPTVATYGAIVDG 376



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +L+  GC P+V+++++++  L +      AL+LFE M           +P++ 
Sbjct: 71  DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 123

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID LC  G V++A  +L +M+  ++ P+++T N ++   C A    EA ++F   
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VT+  ++D L K G+++EA +L E M+  G   N  VY +L+  F + GR 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  P V +Y+ L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +M  KG+ P+   +N+L+   ++  E ++ +     M E
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 186/348 (53%), Gaps = 1/348 (0%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           KPD V YT++I  LCK G + +A+EL  QM+ +   P    YN++I G+  A    +A +
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   + ++G  P+VV+F+ I+  L K  K++EA  L E+M +    PN+  YN ++D  C
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLC 133

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           L GRV  A  +   ME      N+ + +I+++  CK +++E A  ++     +G  P  V
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY +L  GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F+ L
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C+ D+   +  +D + K+G ++    +F  +     + DV +Y+I+IH L   G+ 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  ++F  M+ +G A D  A+N ++ G  ++ +  K  E+L  M E+
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 1/280 (0%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A + F E+  QG++P+ V+++ ++  LCK G++ EA +L   M      P A+ YNT++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+   GR   A +L   +   GC  +V S++ ++    K ++++ ALSL+ E++ K  +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
              TYN +   L    +VE A+++ DEM+   +  +       +D LCK   + EA ++F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            +     C  D  +Y  LIDGL K G++  A+ LF  +      A+ V Y  +I      
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           G+ +  H +F ++  +G  PD    NT M    +  E  K
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 280



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%)

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +AW+ FH L    L  D V+Y  MI  LC  G++ +A +LF  MEA+   P   A+NT++
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 383 LGCIRNNETSKVVELLHRMDER 404
           +G           +LL R+ ER
Sbjct: 61  MGYGSAGRFEDAYKLLERLRER 82



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A + F  L+    + D  SY+ +I  LCK+GRL  A ELF  +     +     YN MI 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM--LGCIRN-NETSKVVELLHRMDERN 405
              + G+ + A+ L   +  +G  P  V+FN+++  LG  R  +E   + E++ +  E N
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 174/314 (55%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A+F  +K +G  P+V +YS LI+GL + G      ++F  M      F +    DA  Y 
Sbjct: 45  AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRG--FAL----DARAYN 98

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++DG CK G VDKA E L +MK K++ P V TY S+I G    +  +EA  LF E   +
Sbjct: 99  AVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 158

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ +S ++D   K G+++EA  +LE M++ G+ PN + +N+LMD       +N A
Sbjct: 159 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEA 218

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P VVTY T+  G
Sbjct: 219 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISG 278

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++  +  A  LF+  + +G   D  ++   I+G+      +EA  +F   R+  C ++
Sbjct: 279 LAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRIN 338

Query: 305 IRSYSCLIDGLCKS 318
           +++   L+D L K+
Sbjct: 339 VKACISLLDALNKA 352



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 176/333 (52%), Gaps = 9/333 (2%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  +   ++  +M  +   PD+   N+ +     A D  + + +F ++   G  P+V ++
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+++  L K G+  E S +   M Q G   +A  YN ++DGFC +G+V++A E   ++E 
Sbjct: 63  SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYE---ALEE 119

Query: 194 MGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M  KH    V +Y  +I+G  K   ++ A  L+ E  SKGI+  V+ Y++L  G  ++ +
Sbjct: 120 MKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++ A+ + +EM + G+A + + + + +D L K   I EAL  F++++ +KC  +  +YS 
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 239

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+GLC+  +   A+  +  + +  L+ +VVTY  MI  L   G +  A  LF   +A G
Sbjct: 240 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANG 299

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD  +FN L+ G    N   + +E  H  +E
Sbjct: 300 GIPDAASFNALIEGMSHAN---RAIEAYHVFEE 329



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 168/345 (48%), Gaps = 11/345 (3%)

Query: 26  INGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
           ++G    GH I     F+EM N  G     C+PD  +  T +D + K G V+K + +   
Sbjct: 1   MHGRKEDGHKI-----FKEM-NRRG-----CQPDLTLLNTYMDCVFKAGDVEKGRAIFED 49

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           +K     PDV +Y+ +I G   A  + E   +F  M  +G   +   ++ ++D  CK+GK
Sbjct: 50  IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGK 109

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A + LE M    V P    Y +++DG     R++ A  LF   +S G + NV  YS 
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G+ K   I+ A  +  EM+ KG+ P V T+N+L   L +  ++  A   F  M+   
Sbjct: 170 LIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 229

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
            + +T+ Y   I+GLC+     +A   ++ ++      ++ +Y+ +I GL K G +  A 
Sbjct: 230 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDAC 289

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
            LF        I D  ++N +I  +    +  +A+ +F +   +G
Sbjct: 290 SLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRG 334



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 146/296 (49%), Gaps = 6/296 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E +++F  +K  G   +   Y+ +++G C++G    A    EEM   +        P   
Sbjct: 77  ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKH------VPPTVA 130

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +IIDGL K   +D+A  L  + K K I  +V+ Y+S+I GF      +EA  +  EM
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV T++ +MD L K  ++ EA    + M ++   PN + Y+ L++G C   + 
Sbjct: 191 MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 250

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A   +  M+  G   NV +Y+ +I+G  K   I  A SL+    + G  P   ++N L
Sbjct: 251 NKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNAL 310

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             G+   ++   A+ +F+E +  G   +  A  + +D L K   I +A  +   LR
Sbjct: 311 IEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLR 366


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 203/437 (46%), Gaps = 79/437 (18%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY T++ G+C +G    A N+ +EMI         C+P+ VIYTT+I    +      A 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASG------CRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV----- 135
            +L +MK++ I PD+  YNS+I G   A   +EA+   +EM++ G++PN  T+       
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 136 ------------------------------IMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                                         +++E CK GK+ EA      M+  G+  +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  LM+G     +V+ A+E+F  M   G   +VFSY +LING+ K   ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ +G+ P V+ YN L  G     ++E+A +L DEM   G+  +   Y T IDG CK+G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF---------HSLPRGVL 336
           + EA  LF  +++     D   Y+ L+DG C+   ++ A  +F          + P   L
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772

Query: 337 IADV-----------------------------VTYNIMIHALCADGKMDKAHDLFLDME 367
           I  V                             VTYNIMI  LC +G ++ A +LF  M+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 368 AKGVAPDCVAFNTLMLG 384
              + P  + + +L+ G
Sbjct: 833 NANLMPTVITYTSLLNG 849



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 217/467 (46%), Gaps = 79/467 (16%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A GC PNV+ Y+TLI    +      A+ + +EM     E G+   PD   Y ++I GL 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA--PDIFCYNSLIIGLS 498

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K   +D+A+  L++M +  + P+  TY + I G+  A++   A +   EM + GV PN V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 132 -----------------------------------TFSVIMDELCKNGKMEEASQLLELM 156
                                              T++V+M+ L KN K+++A ++   M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ F Y  L++GF   G + +A  +F  M   G   NV  Y++L+ G+C++ EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  L  EM  KG+ P  VTY T+  G  +   +  AF+LFDEM+  G+  D++ Y T 
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 277 IDGLCKNGYIVEALELFRT-------------------LRILKCELDIR----------- 306
           +DG C+   +  A+ +F T                    +  K EL              
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 307 --------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ +ID LCK G L+ A ELFH +    L+  V+TY  +++     G+  +
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              +F +  A G+ PD + ++ ++   ++   T+K + L+ +M  +N
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 216/461 (46%), Gaps = 64/461 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           +A +L  ++ + G   +  TYS LI+GL +  +   A  L  EM++              
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 50  ---GEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
               + GV+ K              P A  Y ++I+G C+E  V +  ELL++MK +NI 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
               TY +V++G C + D + A  +  EM+  G +PNVV ++ ++    +N +  +A ++
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI------- 205
           L+ M + G+ P+ F YN+L+ G     R++ A+   V M   G K N F+Y         
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 206 ----------------------------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                                       LIN YCK  ++  A S Y  M+ +GI     T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  GLF+  +V+ A ++F EM+  G+A D ++Y   I+G  K G + +A  +F  + 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++  Y+ L+ G C+SG ++ A EL   +    L  + VTY  +I   C  G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +A  LF +M+ KG+ PD   + TL+ GC R N+  + + + 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 193/371 (52%), Gaps = 13/371 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  PN +  + LIN  C+ G  I A + +  M++  G  G     DA  YT +++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-QGILG-----DAKTYTVLMN 600

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL K   VD A+E+  +M+ K I PDV +Y  +I GF    +  +A  +F EM+++G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+ +++++   C++G++E+A +LL+ M   G+ PNA  Y T++DG+C +G +  A  LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M+  G   + F Y+ L++G C+  ++E A++++     KG   +   +N L   +F+ 
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKF 779

Query: 249 HQVERAFKLFDEM-----QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + E   ++ + +      R G   D   Y   ID LCK G +  A ELF  ++      
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            + +Y+ L++G  K GR    + +F       +  D + Y+++I+A   +G   KA  L 
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898

Query: 364 LDMEAKGVAPD 374
             M AK    D
Sbjct: 899 DQMFAKNAVDD 909



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 188/423 (44%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL--- 70
           G  P   TY  LI+GLC+      A +L  EM       GV    D   Y+ +IDGL   
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSL--DNHTYSLLIDGLLKG 325

Query: 71  --------------------------------CKEGFVDKAKELLLQMKDKNINPDVVTY 98
                                            KEG ++KAK L   M    + P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
            S+I G+C   +  +   L +EM  + +  +  T+  ++  +C +G ++ A  +++ MI 
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RPN  +Y TL+  F    R   A  +   M+  G   ++F Y+ LI G  K K ++ 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A S   EM+  G+KP   TY     G  E  +   A K   EM+  GV  +       I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
             CK G ++EA   +R++       D ++Y+ L++GL K+ ++  A E+F  +    +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DV +Y ++I+     G M KA  +F +M  +G+ P+ + +N L+ G  R+ E  K  ELL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 399 HRM 401
             M
Sbjct: 686 DEM 688



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 52/437 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLF--------EEMINGNGEF----GVVCK---PDAVI 62
           +V TY  LI   CR G+  +  ++            +N +G       ++CK   P    
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDGLCK   ++ AK LL++M    ++ D  TY+ +I G     +++ AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      +   +  + K G ME+A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P VV Y TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------------------- 282
               +  +   A ++  EM+  G+A D + Y + I GL K                    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 283 ----------NGYIVEALELFRTLRILK----CELDIRSYSC--LIDGLCKSGRLKIAWE 326
                     +GYI EA E     + +K    C +      C  LI+  CK G++  A  
Sbjct: 520 PNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            + S+    ++ D  TY ++++ L  + K+D A ++F +M  KG+APD  ++  L+ G  
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 387 RNNETSKVVELLHRMDE 403
           +     K   +   M E
Sbjct: 639 KLGNMQKASSIFDEMVE 655



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 180/395 (45%), Gaps = 51/395 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA + +  +   G   +  TY+ L+NGL +      A  +F EM  G G       PD 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+G  K G + KA  +  +M ++ + P+V+ YN ++ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN VT+  I+D  CK+G + EA +L + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAKELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-----CELDIRSYSCLIDGLC 316
              G+  D   Y   I+   K G   +AL L   +         C+L I +   L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 180/422 (42%), Gaps = 34/422 (8%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-------------DAVI 62
           E  + ++S L   LC  G    AL++ E MI  N     V                D V+
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  + DG   + ++++A  +        + P +     ++      N  +    ++  M+
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 123 DQGVQPNVVTFSVIMDELCKNGKME---------------------EASQLLELMIQIGV 161
           ++ V  +V T+ +++   C+ G ++                      A +L E MI  G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P  + Y+ L+DG C   R+  AK L V M+S+G   +  +YS+LI+G  K +  + A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM+S GI      Y+     + +   +E+A  LFD M   G+     AY + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +   + +  EL   ++     +   +Y  ++ G+C SG L  A+ +   +       +VV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            Y  +I     + +   A  +  +M+ +G+APD   +N+L++G  +     +    L  M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 402 DE 403
            E
Sbjct: 514 VE 515



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           EA  LF ++K  G  P+   Y+TL++G CR      A+ +F                   
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 43  -----------EEMING--NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                       E++N   +G F    KP+ V Y  +ID LCKEG ++ AKEL  QM++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N+ P V+TY S++ G+       E   +F E +  G++P+ + +SVI++   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SQLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  A+++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 150/358 (41%), Gaps = 48/358 (13%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEA 149
           INP+VV   SV+R     +D ++    F  +  Q V +  + +FS +  +LC  G  E+A
Sbjct: 60  INPEVVL--SVLRS-KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKA 116

Query: 150 SQLLELMIQ-------------------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++E MI+                   +G   +  ++  L DG+     +  A  +FV 
Sbjct: 117 LSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEA--VFVF 174

Query: 191 MESMGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG---- 244
             SMG +    +    +L++   +   ++    +Y  M+ + +   V TY+ L I     
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 245 ---------LFEIHQ--------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                    LF+  +        V+ A KL + M   G+    + Y   IDGLCK   + 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +A  L   +  L   LD  +YS LIDGL K      A  L H +    +      Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  +G M+KA  LF  M A G+ P   A+ +L+ G  R     +  ELL  M +RN
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 204/392 (52%), Gaps = 7/392 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
            FG + +V T   L N  CR      A  +FE+M          C+P++V Y+ +I GLC
Sbjct: 158 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEES-----CRPNSVTYSILIHGLC 210

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + G +++A +L  +M +K   P   TY  +I+  C    +++A ++  EM  +   PNV 
Sbjct: 211 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 270

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T+++++D LC+ GK+EEA+ +   M++ G+ P    +N L++G+C  G V  A +L   M
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ P  VTYN L  G  +  Q+
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++      LD  +++ L
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDG CK G+ K    LF ++     +    T+N  + AL  D K+++A+ +   M   G+
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 510

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            P  V    L+ G  R  ET+  +++L RM +
Sbjct: 511 VPSVVTHTILIEGHCRAGETALSLKMLERMKQ 542



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +F K+ K   C PN +TYS LI+GLC  G    A  L +EM+         C+P  
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPST 234

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I   C  G  DKA ++L +M  K   P+V TY  +I   C      EA  +F +
Sbjct: 235 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 294

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P ++TF+ +++  CK G +  A QLL +M +   +PN   YN LM+G C   +
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A  L   +   G   +  +Y+IL++G+CK  ++  A ++++ M S G++P   T+  
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ ++E+A  +   M + G++ D   +   IDG CK G   +   LF  +   +
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     +++C +D L K  +L  A  +   + +  L+  VVT+ I+I   C  G+   + 
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   M+  G +P+   +  ++ G   N    +   +L  M
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 575



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 200/388 (51%), Gaps = 6/388 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++    C PNV TY+ LI+ LCR G    A  +F +M+        +C P  +
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+G CKEG+V  A +LL  M+  N  P++ TYN ++ G C  + S +A  L   +
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 365

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ VT+++++D  CK G++  A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+      T  T+N  
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    +L++   ++   C
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A  
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 605

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           +   M   G  P+   ++ L+ G + +N
Sbjct: 606 IVSTMVKNGCQPNSHIYSALLSGFVLSN 633



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 195/383 (50%), Gaps = 7/383 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           YSTL+  L +     VA  ++  M+N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 149

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-MDQGVQPNVVTFSVIMDEL 140
              ++       D     S++   C  +D  EA R+F +M  ++  +PN VT+S+++  L
Sbjct: 150 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGL 209

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+ G++EEA QL + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 210 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 269

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++T+N L  G  +   V  AF+L   
Sbjct: 270 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 329

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M++     +   Y   ++GLC+     +A  L R +       D  +Y+ L+DG CK G+
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 389

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L +A+ +F+S+    L  D  T+  +I  LC  G++++A+ +   M  KG++ D V F  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G  +  +   V  L   M E
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVE 472



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 21/381 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+ +TY+ L++G C+ G   +A N+F  M +   E      PD  
Sbjct: 357 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGF 410

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK G +++A  +L  M  K I+ D VT+ ++I G C    + +   LF  M
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++        TF+  +D L K+ K+ EA+ +L  M++ G+ P+   +  L++G C  G  
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             + ++   M+  GC  NV++Y+I+ING C N  +E A ++   M S G+ P   TY  L
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 590

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++RAF++   M ++G   ++  Y   + G   +   + A  L  T      
Sbjct: 591 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST-----G 645

Query: 302 ELDIRSYSCLI-DGLCKSGRLKIAWELFHSLPR-------GVLIADVVTYNIMIHALCAD 353
           +LD RS S    D  C S  +    ++ H+L         GV   D+  YN ++  LC +
Sbjct: 646 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLCKE 703

Query: 354 GKMDKAHDLFLDMEAKGVAPD 374
           G++ +A  L  DM   G+ PD
Sbjct: 704 GRIIEADQLTQDMVKHGLFPD 724



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 11/330 (3%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ---GVQPNVVTFSVIMDE 139
           ++ ++  N+   V  +  V R   Y  D +   +L   ++ +   GV    V   +   E
Sbjct: 9   IIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECE 68

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM---GC 196
             +NG ++    L + M ++G R +   Y+TL+   CL  ++N     F+    M   G 
Sbjct: 69  DSENGVVKLMGAL-DGMTELGFRLSYPCYSTLL--MCL-AKLNMGFVAFLVYRRMVNEGF 124

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                 Y  ++N  CKN  ++ A     ++L  G         +L +       +  AF+
Sbjct: 125 VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 184

Query: 257 LFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +F++M +      ++  Y   I GLC+ G + EA +L + +    C+   R+Y+ LI   
Sbjct: 185 VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  G    A ++   +     + +V TY I+I  LC +GK+++A+ +F  M   G+ P  
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + FN L+ G  +        +LL  M++ N
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGN 334


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 204/392 (52%), Gaps = 7/392 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
            FG + +V T   L N  CR      A  +FE+M          C+P++V Y+ +I GLC
Sbjct: 224 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIHGLC 276

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + G +++A +L  +M +K   P   TY  +I+  C    +++A ++  EM  +   PNV 
Sbjct: 277 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 336

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T+++++D LC+ GK+EEA+ +   M++ G+ P    +N L++G+C  G V  A +L   M
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ P  VTYN L  G  +  Q+
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++      LD  +++ L
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDG CK G+ K    LF ++     +    T+N  + AL  D K+++A+ +   M   G+
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 576

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            P  V    L+ G  R  ET+  +++L RM +
Sbjct: 577 VPSVVTHTILIEGHCRAGETALSLKMLERMKQ 608



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 198/402 (49%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +F K+ K   C PN +TYS LI+GLC  G    A  L +EM+         C+P  
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPST 300

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I   C  G  DKA ++L +M  K   P+V TY  +I   C      EA  +F +
Sbjct: 301 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 360

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P ++TF+ +++  CK G +  A QLL +M +   +PN   YN LM+G C   +
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A  L   +   G   +  +Y+IL++G+CK  ++  A ++++ M S G++P   T+  
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ ++E+A  +   M + G++ D   +   IDG CK G   +   LF  +   +
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     +++C +D L K  +L  A  +   + +  L+  VVT+ I+I   C  G+   + 
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +   M+  G +P+   +  ++ G   N    +   +L  M 
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS 642



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 200/388 (51%), Gaps = 6/388 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++    C PNV TY+ LI+ LCR G    A  +F +M+        +C P  +
Sbjct: 318 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 371

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+G CKEG+V  A +LL  M+  N  P++ TYN ++ G C  + S +A  L   +
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ VT+++++D  CK G++  A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+      T  T+N  
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    +L++   ++   C
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A  
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 671

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           +   M   G  P+   ++ L+ G + +N
Sbjct: 672 IVSTMVKNGCQPNSHIYSALLSGFVLSN 699



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 195/383 (50%), Gaps = 7/383 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           YSTL+  L +     VA  ++  M+N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 215

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-MDQGVQPNVVTFSVIMDEL 140
              ++       D     S++   C  +D  EA R+F +M  ++  +PN VT+S+++  L
Sbjct: 216 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 275

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+ G++EEA QL + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 276 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 335

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++T+N L  G  +   V  AF+L   
Sbjct: 336 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 395

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M++     +   Y   ++GLC+     +A  L R +       D  +Y+ L+DG CK G+
Sbjct: 396 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 455

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L +A+ +F+S+    L  D  T+  +I  LC  G++++A+ +   M  KG++ D V F  
Sbjct: 456 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G  +  +   V  L   M E
Sbjct: 516 LIDGHCKIGKAKDVCFLFENMVE 538



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 184/374 (49%), Gaps = 23/374 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+ +TY+ L++G C+ G   +A N+F  M +   E      PD  
Sbjct: 423 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGF 476

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK G +++A  +L  M  K I+ D VT+ ++I G C    + +   LF  M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++        TF+  +D L K+ K+ EA+ +L  M++ G+ P+   +  L++G C  G  
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             + ++   M+  GC  NV++Y+I+ING C N  +E A ++   M S G+ P   TY  L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++RAF++   M ++G   ++  Y   + G   +   + A  L  T      
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST-----G 711

Query: 302 ELDIRSYSCLI-DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           +LD RS S    D  C S  +K           GV   D+  YN ++  LC +G++ +A 
Sbjct: 712 DLDARSLSSEENDNNCLSNEIKKC---------GVPTEDL--YNFLVVGLCKEGRIIEAD 760

Query: 361 DLFLDMEAKGVAPD 374
            L  DM   G+ PD
Sbjct: 761 QLTQDMVKHGLFPD 774



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 11/330 (3%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ---GVQPNVVTFSVIMDE 139
           ++ ++  N+   V  +  V R   Y  D +   +L   ++ +   GV    V   +   E
Sbjct: 75  IIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECE 134

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM---GC 196
             +NG ++    L + M ++G R +   Y+TL+   CL  ++N     F+    M   G 
Sbjct: 135 DSENGVVKLMGAL-DGMTELGFRLSYPCYSTLL--MCL-AKLNMGFVAFLVYRRMVNEGF 190

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                 Y  ++N  CKN  ++ A     ++L  G         +L +       +  AF+
Sbjct: 191 VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 250

Query: 257 LFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +F++M +      ++  Y   I GLC+ G + EA +L + +    C+   R+Y+ LI   
Sbjct: 251 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 310

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  G    A ++   +     + +V TY I+I  LC +GK+++A+ +F  M   G+ P  
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + FN L+ G  +        +LL  M++ N
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGN 400


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 207/432 (47%), Gaps = 32/432 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG----------- 50
           +A  L  +L ++GC+P+ ++Y+TL+ GLC +        LF EM+  N            
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289

Query: 51  ----EFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 G+V              C  +  +   +I+ +CK+G VD A + L  M     N
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN 349

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD ++Y +V++G C A   N+AK L  EM+     PN VTF+  +  LC+ G +E+A  L
Sbjct: 350 PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M + G       YN L++GFC+ G ++ A ELF    SM CK N  +Y+ L+ G C 
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCN 466

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + ++ A  L +EML +   P VVT+N L     +   ++ A +L ++M  HG   +   
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T  DG+ K+    +ALEL   L       D+ ++S +I  L K  R++ A ++FH   
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +    + YN ++  LC   ++D A D    M + G  P+   +  L+ G  R     
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLK 646

Query: 393 KVVELLHRMDER 404
           +  +LL  +  R
Sbjct: 647 EAQDLLSMLCSR 658



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 194/403 (48%), Gaps = 11/403 (2%)

Query: 1   MEAAALFTKLKAF--GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           +  AA   +L A   G  P+V   + LI  LCR G T  A  +      G+G        
Sbjct: 55  LAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAA-EGSGS-----PV 108

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y T++ G C+ G +D A+ L+  M    + PD  TY  +IR  C      +A  L 
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+ +G QPNVVT++V+++ +CKN   E+A  +L+ M   G  PN   YN +++G C  
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GRV+ A++L   + S GC+ +  SY+ L+ G C +K  +    L++EM+ K   P  VT+
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           + L         VERA ++  +M  H  A +T      I+ +CK G + +A +    +  
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             C  D  SY+ ++ GLC++ R   A EL   + R     + VT+N  I  LC  G +++
Sbjct: 346 YGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQ 405

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  L   M+  G     V +N L+ G          +EL   M
Sbjct: 406 AIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 448



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 194/387 (50%), Gaps = 9/387 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TY+ LI  LC  G    AL+L ++M+         C+P+ V YT +++ +CK    
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG------CQPNVVTYTVLLEAMCKNSGF 193

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  +L +M+ K   P++VTYN +I G C     ++A+ L   +   G QP+ V+++ +
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC + + ++  +L   M++    PN   ++ L+  FC  G V RA ++   M    C
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  P  ++Y T+  GL    +   A +
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  EM R+    +   + TFI  LC+ G I +A+ L   ++   C + + +Y+ L++G C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             G +  A ELF S+P      + +TY  ++  LC   ++D A +L  +M  +   P+ V
Sbjct: 434 VQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVV 490

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            FN L+    +     + +EL+ +M E
Sbjct: 491 TFNVLVNFFCQKGFLDEAIELVEQMME 517



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 203/468 (43%), Gaps = 82/468 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR GH   A  L   M            PDA 
Sbjct: 93  DAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---------PVAPDAY 143

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  LC  G V  A  LL  M  +   P+VVTY  ++   C  +   +A  +  EM
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+VT++VI++ +C+ G++++A  LL  +   G +P+   Y TL+ G C + R 
Sbjct: 204 RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263

Query: 182 NRAKELFVSMESMGCKHNVFSY-----------------------------------SIL 206
           +  +ELF  M    C  N  ++                                   +I+
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIV 323

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ---------------- 250
           IN  CK   ++ A    + M S G  P  ++Y T+  GL    +                
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNC 383

Query: 251 -------------------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                              +E+A  L ++MQ HG       Y   ++G C  G+I  ALE
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALE 443

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LFR+   + C+ +  +Y+ L+ GLC + RL  A EL   +       +VVT+N++++  C
Sbjct: 444 LFRS---MPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFC 500

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
             G +D+A +L   M   G  P+ + +NTL  G  ++  +   +ELLH
Sbjct: 501 QKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 179/341 (52%), Gaps = 10/341 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + ++GC P+ I+Y+T++ GLCR      A  L +EM+  N      C P+ V
Sbjct: 335 DAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN------CPPNEV 388

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T I  LC++G +++A  L+ QM++      VVTYN+++ GFC     + A  LF  M
Sbjct: 389 TFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM 448

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN +T++ ++  LC   +++ A++L+  M+     PN   +N L++ FC  G +
Sbjct: 449 ---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL 505

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M   GC  N+ +Y+ L +G  K+   E AL L   ++SKG+ P V+T++++
Sbjct: 506 DEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 565

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +VE A ++F   Q  G+      Y   + GLCK   I  A++    +    C
Sbjct: 566 IGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGC 625

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVV 341
             +  +Y  LI+GL + G LK A +L   L  RGV+  +++
Sbjct: 626 MPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 204/392 (52%), Gaps = 7/392 (1%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
            FG + +V T   L N  CR      A  +FE+M          C+P++V Y+ +I GLC
Sbjct: 201 GFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIHGLC 253

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + G +++A +L  +M +K   P   TY  +I+  C    +++A ++  EM  +   PNV 
Sbjct: 254 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 313

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T+++++D LC+ GK+EEA+ +   M++ G+ P    +N L++G+C  G V  A +L   M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ P  VTYN L  G  +  Q+
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++      LD  +++ L
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDG CK G+ K    LF ++     +    T+N  + AL  D K+++A+ +   M   G+
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            P  V    L+ G  R  ET+  +++L RM +
Sbjct: 554 VPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +F K+ K   C PN +TYS LI+GLC  G    A  L +EM+         C+P  
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPST 277

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I   C  G  DKA ++L +M  K   P+V TY  +I   C      EA  +F +
Sbjct: 278 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 337

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P ++TF+ +++  CK G +  A QLL +M +   +PN   YN LM+G C   +
Sbjct: 338 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 397

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A  L   +   G   +  +Y+IL++G+CK  ++  A ++++ M S G++P   T+  
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++ ++E+A  +   M + G++ D   +   IDG CK G   +   LF  +   +
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C     +++C +D L K  +L  A  +   + +  L+  VVT+ I+I   C  G+   + 
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   M+  G +P+   +  ++ G   N    +   +L  M
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSM 618



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 200/388 (51%), Gaps = 6/388 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++    C PNV TY+ LI+ LCR G    A  +F +M+        +C P  +
Sbjct: 295 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 348

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+G CKEG+V  A +LL  M+  N  P++ TYN ++ G C  + S +A  L   +
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 408

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ VT+++++D  CK G++  A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 409 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+      T  T+N  
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 528

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    +L++   ++   C
Sbjct: 529 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 588

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A  
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 648

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           +   M   G  P+   ++ L+ G + +N
Sbjct: 649 IVSTMVKNGCQPNSHIYSALLSGFVLSN 676



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 195/383 (50%), Gaps = 7/383 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           YSTL+  L +     VA  ++  M+N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 192

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM-MDQGVQPNVVTFSVIMDEL 140
              ++       D     S++   C  +D  EA R+F +M  ++  +PN VT+S+++  L
Sbjct: 193 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 252

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+ G++EEA QL + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 253 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 312

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++T+N L  G  +   V  AF+L   
Sbjct: 313 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 372

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M++     +   Y   ++GLC+     +A  L R +       D  +Y+ L+DG CK G+
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 432

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L +A+ +F+S+    L  D  T+  +I  LC  G++++A+ +   M  KG++ D V F  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 381 LMLGCIRNNETSKVVELLHRMDE 403
           L+ G  +  +   V  L   M E
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVE 515



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 21/381 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+ +TY+ L++G C+ G   +A N+F  M +   E      PD  
Sbjct: 400 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGF 453

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +IDGLCK G +++A  +L  M  K I+ D VT+ ++I G C    + +   LF  M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++        TF+  +D L K+ K+ EA+ +L  M++ G+ P+   +  L++G C  G  
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             + ++   M+  GC  NV++Y+I+ING C N  +E A ++   M S G+ P   TY  L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +++RAF++   M ++G   ++  Y   + G   +   + A  L  T      
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSST-----G 688

Query: 302 ELDIRSYSCLI-DGLCKSGRLKIAWELFHSLPR-------GVLIADVVTYNIMIHALCAD 353
           +LD RS S    D  C S  +    ++ H+L         GV   D+  YN ++  LC +
Sbjct: 689 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLCKE 746

Query: 354 GKMDKAHDLFLDMEAKGVAPD 374
           G++ +A  L  DM   G+ PD
Sbjct: 747 GRIIEADQLTQDMVKHGLFPD 767



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 11/330 (3%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ---GVQPNVVTFSVIMDE 139
           ++ ++  N+   V  +  V R   Y  D +   +L   ++ +   GV    V   +   E
Sbjct: 52  IIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECE 111

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM---GC 196
             +NG ++    L + M ++G R +   Y+TL+   CL  ++N     F+    M   G 
Sbjct: 112 DSENGVVKLMGAL-DGMTELGFRLSYPCYSTLL--MCL-AKLNMGFVAFLVYRRMVNEGF 167

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                 Y  ++N  CKN  ++ A     ++L  G         +L +       +  AF+
Sbjct: 168 VLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 227

Query: 257 LFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +F++M +      ++  Y   I GLC+ G + EA +L + +    C+   R+Y+ LI   
Sbjct: 228 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 287

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  G    A ++   +     + +V TY I+I  LC +GK+++A+ +F  M   G+ P  
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + FN L+ G  +        +LL  M++ N
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGN 377


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            PN +TY+T+I G C  G    AL++  EM    G       P+   Y T+I G CK G 
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGR 196

Query: 76  VDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           VD+A ++  +M  K  + P+ V YN++I G+C     + A      M+++GV   V T++
Sbjct: 197 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 256

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++  L  +G+  EA +L+E M   G+ P+ F YN L++G C  G V +A E+F +M   
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G +  V +Y+ LI    K  +++    L+ E + +GI+P +V YN L         ++RA
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           F++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+ +Y+ LI G
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
               G +K A  + + +        ++TYN +I  LC +G+ D A ++  +M   G+ PD
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496

Query: 375 CVAFNTLMLGCIRNNETS 392
              + +L+ G    +E +
Sbjct: 497 DSTYISLIEGLTTEDERA 514



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 192/385 (49%), Gaps = 12/385 (3%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T++ ++  LC  G    AL L  +M           +P+AV Y T+I G C  G V  A 
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQM----------PRPNAVTYNTVIAGFCSRGRVQAAL 165

Query: 81  ELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIMD 138
           +++ +M+++  I P+  TY +VI G+C     +EA ++F EM+ +G V+P  V ++ ++ 
Sbjct: 166 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 225

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
             C  GK++ A    + M++ GV      YN L+    + GR   A EL   M   G   
Sbjct: 226 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +VF+Y+ILING+CK   ++ AL ++  M  +G++ TVVTY  L   L +  QV+   KLF
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           DE  R G+  D   Y   I+    +G I  A E+   +   +   D  +Y+ L+ GLC  
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR+  A +L   +    +  D+VTYN +I      G +  A  +  +M  KG  P  + +
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 465

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           N L+ G  +N +      ++  M E
Sbjct: 466 NALIQGLCKNGQGDDAENMVKEMVE 490



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 166/312 (53%), Gaps = 6/312 (1%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C A     A    +E++ Q  +PN VT++ ++   C  G+++ A  ++ 
Sbjct: 114 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+  TV TYN L   LF   +   A++L +EM   G+A D + 
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G + +ALE+F  +        + +Y+ LI  L K G+++   +LF    
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R  +  D+V YN +I++    G +D+A ++  +ME K +APD V +NTLM G        
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 393 KVVELLHRMDER 404
           +  +L+  M ER
Sbjct: 410 EARKLIDEMTER 421



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V TY+ LING C+ G+   AL +FE M       GV  +   V
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM----SRRGV--RATVV 323

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  L K+G V +  +L  +   + I PD+V YN++I     + + + A  +  EM
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M  LC  G+++EA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI P   TY +L
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503

Query: 242 FIGL 245
             GL
Sbjct: 504 IEGL 507


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 205/402 (50%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++     + +++T++ +IN LCR G    A +    M      +GV  KP+ V 
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM----EVYGV--KPNVVT 254

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G C  G  + A ++   MKDKN+ PD  TYNS I   C      EA  +  +++
Sbjct: 255 YNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL 314

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN VT++ ++D  C  G +++A    + M+  G+  + F YN L+    L  R+ 
Sbjct: 315 ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIE 374

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+++   M   G + +V +Y+I INGYC+    + ALSL+ EM+ K I+PTV TY +L 
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               + +++  A + F +  + G+  D   +   IDG C NG I  A +L + +   K  
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +++ L+ G C+  +++ A +L   +    +  D ++YN +I      G M  A ++
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           F +M + G  P  + +N L+ G  +  E     ELL  M  +
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 170/314 (54%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ +  KL   G  PN +TY+ LI+G C  G    A    +EM+N     G+V      
Sbjct: 305 EASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNR----GIVA--SVF 358

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  L  E  +++A++++ +M++K + PDVVTYN  I G+C   ++ +A  LF EM
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P V T++ ++D   K  +M EA +  +  I+ G+ P+  ++N L+DG C+ G +
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +RA +L   M++     +  +++ L+ GYC+ +++E A  L  EM  +GIKP  ++YNTL
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A ++FDEM   G       Y   I G  K G    A EL R ++    
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598

Query: 302 ELDIRSYSCLIDGL 315
             D  +Y  +I+ +
Sbjct: 599 TPDDSTYLYVIEAM 612



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 6/348 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ +F  +K    +P+  TY++ I+ LC+      A  +  +++    E G+V  P+AV 
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL----ESGLV--PNAVT 324

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDG C +G +DKA     +M ++ I   V TYN +I          EA+ +  EM 
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV+P+VVT+++ ++  C+ G  ++A  L + M++  +RP    Y +L+D F    R++
Sbjct: 385 EKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMS 444

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+E F      G   ++  ++ LI+G+C N  I+ A  L  EM +  + P  VT+NTL 
Sbjct: 445 EAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +VE A KL DEM+  G+  D  +Y T I G  K G + +ALE+F  +  L  +
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFD 564

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             + +Y+ LI G  K G    A EL   +    +  D  TY  +I A+
Sbjct: 565 PTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 190/407 (46%), Gaps = 40/407 (9%)

Query: 34  HTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
           HT     +F E+        V      +++  ++   C+    D+A E L  MK+  I P
Sbjct: 124 HTTTPTVIFNELSLARNRLNVKT---TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIP 180

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
              T NS++      N    A  ++ EM+   ++ ++VTF+++++ LC+ GK ++A   +
Sbjct: 181 KTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI 240

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M   GV+PN   YNT+++G+CL G+   A ++F +M+    K + ++Y+  I+  CK 
Sbjct: 241 GHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKE 300

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + IE A  +  ++L  G+ P  VTYN L  G      +++AF   DEM   G+ A  + Y
Sbjct: 301 RRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTY 360

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF----- 328
              I  L     I EA ++ + +R    E D+ +Y+  I+G C+ G  K A  LF     
Sbjct: 361 NLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE 420

Query: 329 -------------------------------HSLPRGVLIADVVTYNIMIHALCADGKMD 357
                                           S+  G+L  D++ +N +I   C +G +D
Sbjct: 421 KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML-PDIIMFNALIDGHCVNGNID 479

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  L  +M+   V PD V FNTLM G  R  +  +  +LL  M ER
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 35/225 (15%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A  +Y EM+   IK ++VT+N +   L    + ++A      M+ +GV  +   Y T
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+G C  G    A ++F+T++    + D  +Y+  I  LCK  R++ A  +   L    
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 336 LIADVVTYNIMIHALCADGKMDKA-----------------------HDLFL-------- 364
           L+ + VTYN +I   C  G +DKA                       H LFL        
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 365 ----DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               +M  KGV PD V +N  + G  R     K + L   M E+N
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 202/413 (48%), Gaps = 30/413 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
           EA  L  ++K  G  P++ +YS L+N  C  G     +NL +EM + N +  +VC     
Sbjct: 278 EALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVL 337

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   K D + Y+T+I G  K   V  A  L+ +M+   + 
Sbjct: 338 MGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLV 397

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD + Y S+IR +C      EA + F  M+  G+QP+++T + I+D+ C  G+ EEA   
Sbjct: 398 PDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIY 457

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M    + PN++ Y+ +++  C    V +A E+   M       +V  Y+ +++GY K
Sbjct: 458 INQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAK 517

Query: 213 N-KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
             K    A  LY +M   G KP  VT   L     +  ++ +A  LF EM   G++ D +
Sbjct: 518 QFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEF 577

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           A+   IDG C+ G +  A  +++ ++      ++++Y+CL+DG CK  RL +A  L   +
Sbjct: 578 AFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDM 637

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            R  +  DV TY  +I        +D+A+++F +M+ KG  PD +A+ TL LG
Sbjct: 638 KRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 197/441 (44%), Gaps = 45/441 (10%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGH----TIVALNLFEEMINGNGEFGVVCKPDA 60
           +LF  LK  G  PNV TY+ +IN  C+  H     +   +L  E +   GE      P  
Sbjct: 171 SLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGE-----NPTV 225

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y   I GLC+ G ++ A   +  ++  N   ++  YN++I+GFC     +EA +L  E
Sbjct: 226 VTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEE 285

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ P++ ++S++++  C  G +E    L++ M     +P      +++ G    G 
Sbjct: 286 MKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGL 345

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILING------------------------------- 209
           VN     F  + + G KH++ SYS LI+G                               
Sbjct: 346 VNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYIS 405

Query: 210 ----YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
               YC+   ++ AL  +  ML  G++P ++T N +        Q E A    ++M+   
Sbjct: 406 LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN 465

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI-A 324
           +  +++ Y   I+ LCK   + +A E+   +        +  Y+ ++DG  K  +  + A
Sbjct: 466 ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKA 525

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           W+L+  +P+     D VT  +++      GKM KA +LF +M  +G++ D  AF  ++ G
Sbjct: 526 WKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDG 585

Query: 385 CIRNNETSKVVELLHRMDERN 405
             R     +   +  +M   N
Sbjct: 586 YCRVGNVKRAWSMYKKMKRNN 606



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/474 (22%), Positives = 205/474 (43%), Gaps = 77/474 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ +  +++  G  P V+TY   I+GLCR G    A N  +++ + N    + C     
Sbjct: 208 QASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYC----- 262

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND----------- 110
            Y  +I G C++G  D+A +LL +MKD+ I+PD+ +Y+ ++  FC   D           
Sbjct: 263 -YNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEM 321

Query: 111 ------------------------SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                                    N+    F E+  +G + +++++S ++    K   +
Sbjct: 322 EHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNV 381

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A+ L+  M + G+ P+  +Y +L+  +C  G +  A + F +M   G + ++ + + +
Sbjct: 382 KSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHI 441

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE-------------- 252
           ++ YC   + E AL   ++M  + I P   TY+ +   L +   VE              
Sbjct: 442 VDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNI 501

Query: 253 ----------------------RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
                                 +A+KL+ +M + G   D       +D   K G + +AL
Sbjct: 502 FPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKAL 561

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            LF+ +       D  +++ +IDG C+ G +K AW ++  + R  +  +V TY  ++   
Sbjct: 562 NLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGF 621

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           C   ++D A  L  DM+   V PD   +  L+ G  R     +  E+   M ++
Sbjct: 622 CKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKK 675



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 40/349 (11%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN-----DSNEAKRLFIEMMDQGVQPNV 130
           ++  + L   +K+   +P+V TY  +I  +C        D  +A  +  EM ++G  P V
Sbjct: 166 LEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTV 225

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT+ V +  LC+ G +E+A   ++ +       N + YN L+ GFC  GR + A +L   
Sbjct: 226 VTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEE 285

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSL---------------------------- 222
           M+  G   +++SYSIL+N +C   +IE  ++L                            
Sbjct: 286 MKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGL 345

Query: 223 -------YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                  + E+ +KG K  +++Y+TL  G  + H V+ A  L  EM+++G+  D   Y +
Sbjct: 346 VNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYIS 405

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I   C+ G + EAL+ F T+     + DI + + ++D  C  G+ + A    + +    
Sbjct: 406 LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN 465

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++ +  TY+++I+ LC    ++KA ++   M    + P  + + T+M G
Sbjct: 466 ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDG 514



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 7/304 (2%)

Query: 105 FCYANDSNEAKRLFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
           F Y  ++     LF   +D    V  +    S+++     N  + +A  +     +IGV 
Sbjct: 88  FYYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVE 147

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK-----NKEIE 217
            N    N L+       ++   + LF  +++ G   NV++Y+I+IN YCK     N ++E
Sbjct: 148 LNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDME 207

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  EM  KG  PTVVTY     GL  +  +E A+    +++      + + Y   I
Sbjct: 208 QASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALI 267

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            G C+ G   EAL+L   ++      DI SYS L++  C  G ++    L   +      
Sbjct: 268 QGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKK 327

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             +V    ++  L   G ++   + F ++ AKG   D ++++TL+ G ++ +       L
Sbjct: 328 PPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNL 387

Query: 398 LHRM 401
           +H M
Sbjct: 388 VHEM 391



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L+ K+   GC+P+ +T + L++   + G    ALNLF+EM     E G+    D 
Sbjct: 523 MKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEM----AEEGL--SRDE 576

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +T IIDG C+ G V +A  +  +MK  N+ P+V TY  ++ GFC     + A  L  +
Sbjct: 577 FAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDD 636

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           M    V P+V T++ ++    +   ++ A ++ + M + G  P+   Y TL
Sbjct: 637 MKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 201/405 (49%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDA 60
           EA     K+   G EP+  TY+TLI G C+ G   +A     E I G+  F G V  PD 
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQ 356

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y ++IDGLC EG  ++A  L  +   K I P+V+ YN++I+G        EA +L  E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P V TF+++++ LCK G + +A  L+++MI  G  P+ F +N L+ G+    +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A E+   M   G   +V++Y+ L+NG CK  + E  +  Y  M+ KG  P + T+N 
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-IL 299
           L   L    +++ A  L +EM+   V  D   + T IDG CKNG +  A  LFR +    
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K      +Y+ +I    +   + +A +LF  +    L  D  TY +M+   C  G ++  
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +   L+M   G  P       ++      +   +   ++HRM ++
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 207/404 (51%), Gaps = 8/404 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV-VCKPDAV 61
           A  L   + + GCE NV+ Y T++ G            LF +M+      GV +C     
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS----GVSLC---LS 217

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++  LCK+G V + ++LL ++  + + P++ TYN  I+G C   + + A R+   +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG +P+V+T++ ++  LCKN K +EA   L  M+  G+ P+++ YNTL+ G+C  G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +       G   + F+Y  LI+G C   E   AL+L++E L KGIKP V+ YNTL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +  A +L +EM   G+  +   +   ++GLCK G + +A  L + +     
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +++ LI G     +++ A E+   +    +  DV TYN +++ LC   K +   +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +  M  KG AP+   FN L+    R  +  + + LL  M  ++
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 195/364 (53%), Gaps = 7/364 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  TY +LI+GLC  G T  AL LF E +      G   KP+ ++Y T+I GL  +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEAL------GKGIKPNVILYNTLIKGLSNQ 404

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A +L  +M +K + P+V T+N ++ G C     ++A  L   M+ +G  P++ TF
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++       KME A ++L++M+  GV P+ + YN+L++G C T +     E + +M  
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  N+F+++IL+   C+ ++++ AL L  EM +K + P  VT+ TL  G  +   ++ 
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584

Query: 254 AFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A+ LF +M+  + V++ T  Y   I    +   +  A +LF+ +       D  +Y  ++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK+G + + ++    +     I  + T   +I+ LC + ++ +A  +   M  KG+ 
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704

Query: 373 PDCV 376
           P+ V
Sbjct: 705 PEAV 708



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F ++  + CEP V +Y+ +++ L  +G+   A  ++  M     + G+   PD  
Sbjct: 94  EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM----RDRGIT--PDVY 147

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T  +   CK      A  LL  M  +    +VV Y +V+ GF   N   E   LF +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV   + TF+ ++  LCK G ++E  +LL+ +I+ GV PN F YN  + G C  G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +   +   G K +V +Y+ LI G CKN + + A     +M+++G++P   TYNTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+ A ++  +   +G   D + YR+ IDGLC  G    AL LF        
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++  Y+ LI GL   G +  A +L + +    LI +V T+NI+++ LC  G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M +KG  PD   FN L+ G     +    +E+L  M
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 7/290 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA L  ++   G  P V T++ L+NGLC+ G    A  L + MI+  G F     PD 
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYF-----PDI 461

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  +I G   +  ++ A E+L  M D  ++PDV TYNS++ G C  +   +    +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN+ TF+++++ LC+  K++EA  LLE M    V P+A  + TL+DGFC  G 
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 181 VNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ A  LF  M E+     +  +Y+I+I+ + +   +  A  L+ EM+ + + P   TY 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            +  G  +   V   +K   EM  +G           I+ LC    + EA
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 161/343 (46%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   +    ++G V +A  +  +M   +  P V +YN+++     +   ++A ++++ M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+V +F++ M   CK  +   A +LL  M   G   N   Y T++ GF      
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ELF  M + G    + +++ L+   CK  +++    L  +++ +G+ P + TYN  
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A ++   +   G   D   Y   I GLCKN    EA      +     
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y+ LI G CK G +++A  +         + D  TY  +I  LC +G+ ++A  
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF +   KG+ P+ + +NTL+ G        +  +L + M E+
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 5/340 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV--TYNSVIRGFCYANDSNEAKRLFIE 120
           Y ++I+ L   G  +  +E+L+ M++ N+   ++   Y   ++ +       EA  +F  
Sbjct: 43  YRSVIEKLGYYGKFEAMEEVLVDMRE-NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     +P V +++ IM  L  +G  ++A ++   M   G+ P+ + +   M  FC T R
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILING-YCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            + A  L  +M S GC+ NV +Y  ++ G Y +N + EG   L+ +ML+ G+   + T+N
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTFN 220

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L +   V+   KL D++ + GV  + + Y  FI GLC+ G +  A+ +   L   
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+ +Y+ LI GLCK+ + + A      +    L  D  TYN +I   C  G +  A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
             +  D    G  PD   + +L+ G     ET++ + L +
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 136/294 (46%), Gaps = 2/294 (0%)

Query: 110 DSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFV 167
           D  +A  +F  M  + G +  + T+  ++++L   GK E   ++L ++   +G      V
Sbjct: 19  DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y   M  +   G+V  A  +F  M+   C+  VFSY+ +++    +   + A  +Y  M 
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +GI P V ++        +  +   A +L + M   G   +  AY T + G  +  +  
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           E  ELF  +      L + +++ L+  LCK G +K   +L   + +  ++ ++ TYN+ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             LC  G++D A  +   +  +G  PD + +N L+ G  +N++  +    L +M
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 44/196 (22%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN+ T++ L+  LCR      AL L EEM N +        PDAV + T+IDG CK 
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKN 579

Query: 74  GFVDKA------------------------------------KELLLQMKDKNINPDVVT 97
           G +D A                                    ++L  +M D+ + PD  T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y  ++ GFC   + N   +  +EMM+ G  P++ T   +++ LC   ++ EA+ ++  M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699

Query: 158 QIGVRPNAFVYNTLMD 173
           Q G+ P A   NT+ D
Sbjct: 700 QKGLVPEAV--NTICD 713


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 203/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F      GC P+ +TY +LI+GL + G    A  LFE+M++           + V
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH------NANPV 360

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I      G  +   ++  ++  +   PD+   N+ +     A +  + + +F ++
Sbjct: 361 VYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 420

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V ++S+++  L K G+  E S +   M Q G   +A  YN ++DGFC +G+V
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 480

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   M+    +  V +Y  +++G  K   ++ A  L+ E  SKGI+  VV Y++L
Sbjct: 481 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +EM + G+  + + + + +D L K   I EAL  F++++ +KC
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L+ +VVTY  MI  L   G +  A+ 
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 660

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   +A G  PD  +FN L+ G    N  
Sbjct: 661 LFERFKANGGIPDAASFNALIEGMSNANRA 690



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 211/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++K    EP+++ Y+  I+   + G+  +A   F E+    G      KPD V
Sbjct: 98  DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL-KAQG-----LKPDDV 151

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  LCK G + +A+EL  QM+ +   P    YN++I G+  A    +A +L   +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+VV+F+ I+  L K  K++EA  L E+M +    PN+  YN ++D  CL GRV
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 270

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   ME      N+ + +I+++  CK +++E A  ++     +G  P  VTY +L
Sbjct: 271 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 330

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  QV+ A++LF++M   G  A+   Y + I     +G   +  ++F+ L    C
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+   +  +D + K+G ++    +F  +     + DV +Y+I+IH L   G+  +  +
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 450

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M+ +G A D  A+N ++ G  ++ +  K  E+L  M E+
Sbjct: 451 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +L+  GC P+V+++++++  L +      AL+LFE M           +P++ 
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 255

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  IID LC  G V++A  +L +M+  ++ P+++T N ++   C A    EA ++F   
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VT+  ++D L K G+++EA +L E M+  G   N  VY +L+  F + GR 
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  P V +Y+ L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +M  KG+ P+   +N+L+   ++  E ++ +     M E
Sbjct: 556 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 10/391 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  +LK     P    Y+ LI  L        AL L  +M     E GV       +
Sbjct: 32  AVAVMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH------L 82

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++  L +EG V  A  L+ ++K   + PD+V YN  I  F  A + + A + F E+ 
Sbjct: 83  FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELK 142

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG++P+ V+++ ++  LCK G++ EA +L   M      P A+ YNT++ G+   GR  
Sbjct: 143 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 202

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +   GC  +V S++ ++    K ++++ ALSL+ E++ K  +P   TYN + 
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 261

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    +VE A+++ DEM+   +  +       +D LCK   + EA ++F +     C 
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y  LIDGL K G++  A+ LF  +      A+ V Y  +I      G+ +  H +
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           F ++  +G  PD    NT M    +  E  K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 412



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 1/316 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M+     P    Y  +I     A     A  L  +M + G +  V  F+ ++  L + G+
Sbjct: 36  MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           + +A  L++ +    + P+  +YN  +D F   G V+ A + F  +++ G K +  SY+ 
Sbjct: 96  VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I   CK   +  A  L+++M ++   P    YNT+ +G     + E A+KL + ++  G
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                 ++ + +  L K   + EAL LF  ++    E +  +Y+ +ID LC  GR++ A+
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAY 274

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            +   +    L  +++T NIM+  LC   K+++A+ +F     +G  PDCV + +L+ G 
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334

Query: 386 IRNNETSKVVELLHRM 401
            +  +  +   L  +M
Sbjct: 335 GKKGQVDEAYRLFEKM 350



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 1/243 (0%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L +  ++++A   + +M ++  RP    Y  L+       R  RA EL   M+ +G +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V  ++ L+    +  ++  AL+L  E+    ++P +V YN       +   V+ A K F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           E++  G+  D  +Y + I  LCK G + EA ELF  +   +      +Y+ +I G   +G
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R + A++L   L     I  VV++N ++  L    K+D+A  LF  M+ K   P+   +N
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYN 258

Query: 380 TLM 382
            ++
Sbjct: 259 III 261



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF + K+ G E NV+ YS+LI+G  + G    A  + EEM+           P+  
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG------LTPNVY 570

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +++D L K   +++A      MK+    P+  TY+ +I G C     N+A   + +M
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 630

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PNVVT++ ++  L K G + +A  L E     G  P+A  +N L++G     R 
Sbjct: 631 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 690

Query: 182 NRAKELFV-SMESMGCKHN 199
             A +  V  + S  C  N
Sbjct: 691 MEAYQTTVYQLSSSSCSWN 709



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           + + ++ A+   + M     +P    Y  L   L E  + ERA +L  +MQ  G      
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            + T +  L + G + +AL L   ++    E DI  Y+  ID   K+G + +A + FH L
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L  D V+Y  MI  LC  G++ +A +LF  MEA+   P   A+NT+++G       
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 392 SKVVELLHRMDER 404
               +LL R+ ER
Sbjct: 202 EDAYKLLERLRER 214


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 218/411 (53%), Gaps = 17/411 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +  K+      PNV TY+ L+NGLCR+  T +A  +F+EM   NG     CKP+ 
Sbjct: 105 MDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM-KRNG-----CKPNP 158

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+I  L + G +D+A  ++++ +   +  DV+T  +++ G C A+  ++A +   E
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEE 218

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-MIQIGVRPNAFVYNTLMDGFCLTG 179
           M   GV+PN VT+S ++    ++G+++   +  E    + G    A  Y   +D  C  G
Sbjct: 219 MRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAG 278

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++RA++    +   G   +V +YS+LIN + +  + + +L L  +M   G+KP VVTY+
Sbjct: 279 YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYS 338

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL   L +  + + AF+L + M+  G   +   Y + +DGLCK+G + E   ++  +   
Sbjct: 339 TLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C  D+ +YS +++GL K+G L  A +LF  +       D   Y+++I +LC  GK+++A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458

Query: 360 HDLFLDMEAKGVAPD--CVAFNTLMLG---CIRNNETSKVVELL----HRM 401
             ++  ME   VA D  C A   L+       R +   ++VE+     HRM
Sbjct: 459 CGMYHGMEVT-VAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRM 508



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 196/387 (50%), Gaps = 7/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P +  Y+ +I GLCR    + A  + E+M+    E  +V  P+   YT +++GLC+    
Sbjct: 86  PTLFIYNGIITGLCRASRVMDAYKVLEKMV----EESIV--PNVFTYTILLNGLCRSNKT 139

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A+E+  +MK     P+ +TY ++I+    A + +EA R+ IE     +  +V+T + I
Sbjct: 140 KLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTI 199

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM-G 195
           +  LCK  ++++A + +E M Q+GVRPN   Y+ L+ GF   G ++R    F   ++  G
Sbjct: 200 VGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
                 +Y   ++  CK   ++ A     E+   G+ P VVTY+ L        Q + + 
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L ++M+R+GV  D   Y T I+ LCK     +A  L   +       ++ +Y+ ++DGL
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGL 379

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CKSG++     ++  + +     DVVTY+I+++ L   G +D A  LF  +++    PD 
Sbjct: 380 CKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDA 439

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMD 402
            A++ ++    R  +  +   + H M+
Sbjct: 440 AAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 183/342 (53%), Gaps = 6/342 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++DGLC  G  ++A EL+ ++      P +  YN +I G C A+   +A ++  +M+
Sbjct: 57  YKLVVDGLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMV 115

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + PNV T++++++ LC++ K + A ++ + M + G +PN   Y TL+      G ++
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  + +   S+    +V + + ++ G CK   ++ AL    EM   G++P  VTY+ L 
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235

Query: 243 IGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            G  +  +++R  + F+E + R G + +  AY  ++D LCK GY+  A +    LR    
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGV 295

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS LI+   ++G+   + EL   + R  +  DVVTY+ +I+ LC + K   A  
Sbjct: 296 VPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFR 355

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   MEA G  P+ V +N++M G  ++ +  +V    HR+ E
Sbjct: 356 LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEV----HRVYE 393



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 37/324 (11%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           AK L   +++ GV+ +   F+++  +L +  K  E  +L  L+   GV      Y  ++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G  N+A EL   +  +     +F Y+ +I G C+   +  A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            V TY  L  GL   ++ + A ++F EM+R+G   +   Y T I  L + G I EAL + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH----- 348
              R L+   D+ + + ++ GLCK+ RL  A +    + +  +  + VTY+ ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 349 -------------------------------ALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                                          ALC  G +D+A     ++   GV PD V 
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++ L+    R  +    +ELL  M
Sbjct: 302 YSMLINTFARAGQFDASLELLEDM 325



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 2/258 (0%)

Query: 149 ASQLLEL-MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           A++LLE  +++ GV+ ++  +  L        + +    LF  + S G  +   +Y +++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G C       AL L  E LS    PT+  YN +  GL    +V  A+K+ ++M    + 
Sbjct: 62  DGLCGAGMANQALELVRE-LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            + + Y   ++GLC++     A E+F+ ++   C+ +  +Y  LI  L ++G +  A  +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
                   L  DV+T   ++  LC   ++D A     +M   GV P+ V ++ L+ G  +
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 388 NNETSKVVELLHRMDERN 405
           + E  +V+        R 
Sbjct: 241 HGELDRVIRFFEEEKARK 258


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF + +  G  P++ T S LIN  C   H   A ++F  ++           P+A+   
Sbjct: 82  SLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYH------PNAITLN 135

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I GLC  G + +A     ++  +    D V+Y ++I G C A ++    RL  ++   
Sbjct: 136 TLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 195

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P++V ++ I+  LCKN  + +A  L   MI  G+ PN F Y TL+ GFC+ G +  A
Sbjct: 196 SVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEA 255

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M+      +V++++ILI+   K  +I+ A+SL+ EM  K + P +VTY +L  G
Sbjct: 256 FSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDG 315

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L + H +ERA  L  +M+  G+  + ++Y   +D LCK G +  A + F+ L +    L+
Sbjct: 316 LCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 375

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y+ +I+GLCK+G      +L   +     + + +T+  +I AL    + DKA     
Sbjct: 376 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLR 435

Query: 365 DMEAKGV 371
           +M A+G+
Sbjct: 436 EMIARGL 442



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 206/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++      P    ++ +++ L +       ++LF++    NG       PD  
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNG-----ITPDLC 97

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +I+  C    +  A  +   +  +  +P+ +T N++I+G C+  +   A     ++
Sbjct: 98  TLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKV 157

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG Q + V++  +++ LCK G+ +  ++LL  +    V+P+  +Y T++   C    +
Sbjct: 158 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLL 217

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L+  M   G   NVF+Y+ LI+G+C    ++ A SL +EM  K I P V T+N L
Sbjct: 218 GDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNIL 277

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +++ A  LF+EM+   +  +   Y + IDGLCKN ++  A+ L + ++    
Sbjct: 278 IDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 337

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           + ++ SY+ L+D LCK GRL+ A + F H L +G  + +V TYN+MI+ LC  G      
Sbjct: 338 QPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHL-NVRTYNVMINGLCKAGLFGDVM 396

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           DL   ME KG  P+ + F T++   +  +E  K  + L  M  R
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIAR 440


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 200/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L ++++  GC PN +TY+ L+NGL + G    A  L EEM+N            A 
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG------LNVSAY 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C++G   +A +L+ +M ++   P + TYN+++ G C        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P++V+F+ ++   C+ G + EA  L + +    + P    YNTL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   ++F+Y+IL+NG  K   +  A   ++EMLSKG+KP    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G  +I     AF + +EM   G   D   Y  F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +I+G  K+G L+ A E+F+ +    +   VVTY ++IHA  A   +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  M  K V  + + +N ++ G        +  +    M+E+
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK 629



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 174/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +LK     P VITY+TLI+GLC  G+   AL L +EM +  G F     PD  
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-QGLF-----PDIF 426

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K G+V  A+    +M  K + PD   YN+ I G     D++ A  +  EM
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V+T++V +  LC+ G  EEA  LLE M+  G+ P+   Y ++++GF   G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+E+F  M S G   +V +Y++LI+ +   + ++ A   +S+ML K +   V+TYN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +++ A+K FDEM+  G+  + ++Y   I+  C  GY  EAL L+R +   K 
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666

Query: 302 ELDIRSYSCLIDGL 315
           + D  ++S  +  L
Sbjct: 667 QPDSFTHSVFLKNL 680



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 2/351 (0%)

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           +FG+  KP  V Y T++D  CKEG VD+A ELL +M+++   P+ VTYN ++ G     +
Sbjct: 208 QFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             +AK L  EM++ G+  +  T++ +++  C+ G   EA  L+E M+     P    YNT
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           LM G C   +V   +  F  M       ++ S++ L+ GYC+   I  A  L+ E+  + 
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + PTV+TYNTL  GL     ++ A +L  EM   G+  D + Y   ++G  K GY+  A 
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             F  +     + D  +Y+  I G  K     +A+ +   +       DV+TYN+ +HAL
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C  G  ++A DL  +M + G+ PD V + +++ G ++N    K  E+ + M
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 131/253 (51%), Gaps = 9/253 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F ++ + G +P+   Y+T I G  +   T VA ++ EEM+           PD + 
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG------FPPDVIT 497

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   +  LC++G  ++A +LL  M    + PD VTY S+I GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+VVT++V++        ++ A      M++  V  N   YN +++G C+T R++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A + F  ME  G   N FSY+ILIN  C     E AL LY EML + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 243 IGL---FEIHQVE 252
             L   +++H V+
Sbjct: 678 KNLHRDYQVHAVQ 690



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 90/190 (47%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A ++Y  M   GIKPTVVTYNT+     +  +V++A +L  EMQ  G   +   Y  
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GL K G + +A  L   +      +   +Y+ LI+G C+ G    A++L   +    
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
               + TYN +++ LC   ++      F DM      PD V+FN+L+ G  R    S+  
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 396 ELLHRMDERN 405
            L   +  R+
Sbjct: 376 LLFDELKCRD 385



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 15/233 (6%)

Query: 155 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +M Q   + + FV+  ++D   G  L        E  VS E  G         +LI G+ 
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGV------VDVLIAGHV 162

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
                   L ++ +M+  G+ P V   N +   L + + + +A  ++  M++ G+     
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y T +D  CK G + +ALEL   ++   C  +  +Y+ L++GL K G L+ A  L   +
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               L     TYN +I+  C  G   +A DL  +M  +   P    +NTLM G
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +FD+M R+G+  D       +  L     + +A  ++  +     +  + +Y+ ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GR+  A EL   +       + VTYN++++ L   G++++A  L  +M   G+     
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N L+ G  +     +  +L+  M  R
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNR 314


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   L+ FG  PNV+ Y+TLI+G C+ G+ ++A NLF +M       G+V  P+   Y+ 
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM----NRLGLV--PNPHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++G  K+G   +  ++   MK   I P+   YN +I  +C     ++A ++F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +   V+T+++++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC   +++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I P+ VTY  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             ++  E+A ++   M++ G+  D + Y   + GLC +G + EA +LF++L  +  + + 
Sbjct: 414 ARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I G CK G    A  L + + +  ++ +V ++   I  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 534 MINSGLKPS 542



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 7/378 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           ++  +I G C  G+ +    L   +     EFG+   P+ VIYTT+IDG CK+G V  AK
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAML----EEFGL--SPNVVIYTTLIDGCCKDGNVMLAK 213

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            L  +M    + P+  TY+ ++ GF       E  +++  M   G+ PN   ++ ++ E 
Sbjct: 214 NLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C +G +++A ++   M + G+      YN L+ G C   +   A +L   +  +G   N+
Sbjct: 274 CNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILING+C  ++++ A+ L++++ S G+ PT+VTYNTL  G  ++  +  A  L  E
Sbjct: 334 VTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKE 393

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M+   +A     Y   ID   +  +  +A E+   +       D+ +YS L+ GLC  G 
Sbjct: 394 MEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGN 453

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +K A +LF SL    L  + V YN MIH  C +G   +A  L  +M   G+ P+  +F +
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513

Query: 381 LMLGCIRNNETSKVVELL 398
             +G +  +E  K  ELL
Sbjct: 514 -TIGLLCRDEKWKEAELL 530



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 182/343 (53%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           DA  +  +I G C+ G+  K   LL  +++  ++P+VV Y ++I G C   +   AK LF
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+ PN  T+SV+M+   K G   E  Q+ E M + G+ PNA+ YN L+  +C  
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G V++A ++F  M   G    V +Y+ILI G C+ K+   A+ L  ++   G+ P +VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  G  ++ +++ A +LF++++  G++     Y T I G  K   +  AL+L + +  
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ LID   +    + A E+   + +  L+ DV TY++++H LC  G M +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE 456

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF  +    + P+ V +NT++ G  +   + + + LL+ M
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 189/414 (45%), Gaps = 12/414 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF      G +    + S ++N L  +G    A +L   +I+G     ++      
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQA 80

Query: 56  ----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
               C     +Y T+++        D+A   L  M  +   P   T+N+++     +N  
Sbjct: 81  HFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYF 140

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A  +F E+  + V  +  +F +++   C+ G   +  +LL ++ + G+ PN  +Y TL
Sbjct: 141 DKAWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G V  AK LF  M  +G   N  +YS+L+NG+ K         +Y  M   GI
Sbjct: 200 IDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGI 259

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P    YN L         V++AFK+F EM+  G+A     Y   I GLC+     EA++
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +  +    +I +Y+ LI+G C   ++  A  LF+ L    L   +VTYN +I    
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               +  A DL  +ME + +AP  V +  L+    R N T K  E +H + E++
Sbjct: 380 KVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE-MHSLMEKS 432



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 139/273 (50%), Gaps = 6/273 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G    V+TY+ LI GLCR      A+ L  + +N  G       P+ V
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK-VNKVG-----LSPNIV 334

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C    +D A  L  Q+K   ++P +VTYN++I G+    +   A  L  EM
Sbjct: 335 TYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ VT+++++D   +    E+A ++  LM + G+ P+ + Y+ L+ G C+ G +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNM 454

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF S+  M  + N   Y+ +I+GYCK      AL L +EM+  G+ P V ++ + 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCST 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
              L    + + A  L  +M   G+      Y+
Sbjct: 515 IGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 6/205 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF +LK+ G  P ++TY+TLI G  +  +   AL+L +EM            P  V
Sbjct: 351 SAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER------CIAPSKV 404

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +ID   +    +KA E+   M+   + PDV TY+ ++ G C   +  EA +LF  +
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL 464

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  +QPN V ++ ++   CK G    A +LL  M+Q G+ PN   + + +   C   + 
Sbjct: 465 GEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKW 524

Query: 182 NRAKELFVSMESMGCKHNVFSYSIL 206
             A+ L   M + G K +V  Y ++
Sbjct: 525 KEAELLLGQMINSGLKPSVSLYKMV 549


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 200/403 (49%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L ++++  GC PN +TY+ L+NGL + G    A  L EEM+N            A 
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG------LNVSAY 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+G C++G   +A +L+ +M ++   P + TYN+++ G C        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P++V+F+ ++   C+ G + EA  L + +    + P    YNTL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   G   ++F+Y+IL+NG  K   +  A   ++EMLSKG+KP    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G  +I     AF + +EM   G   D   Y  F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +I+G  K+G L+ A E+F+ +    +   VVTY ++IHA  A   +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            F  M  K V  + + +N ++ G        +  +    M+E+
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK 629



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 174/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +LK     P VITY+TLI+GLC  G+   AL L +EM +  G F     PD  
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-QGLF-----PDIF 426

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K G+V  A+    +M  K + PD   YN+ I G     D++ A  +  EM
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V+T++V +  LC+ G  EEA  LLE M+  G+ P+   Y ++++GF   G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A+E+F  M S G   +V +Y++LI+ +   + ++ A   +S+ML K +   V+TYN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    +++ A+K FDEM+  G+  + ++Y   I+  C  GY  EAL L+R +   K 
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666

Query: 302 ELDIRSYSCLIDGL 315
           + D  ++S  +  L
Sbjct: 667 QPDSFTHSVFLKNL 680



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 2/351 (0%)

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
           +FG+  KP  V Y T++D  CKEG VD+A ELL +M+++   P+ VTYN ++ G     +
Sbjct: 208 QFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
             +AK L  EM++ G+  +  T++ +++  C+ G   EA  L+E M+     P    YNT
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           LM G C   +V   +  F  M       ++ S++ L+ GYC+   I  A  L+ E+  + 
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + PTV+TYNTL  GL     ++ A +L  EM   G+  D + Y   ++G  K GY+  A 
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             F  +     + D  +Y+  I G  K     +A+ +   +       DV+TYN+ +HAL
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           C  G  ++A DL  +M + G+ PD V + +++ G ++N    K  E+ + M
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 131/253 (51%), Gaps = 9/253 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F ++ + G +P+   Y+T I G  +   T VA ++ EEM+           PD + 
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG------FPPDVIT 497

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y   +  LC++G  ++A +LL  M    + PD VTY S+I GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+VVT++V++        ++ A      M++  V  N   YN +++G C+T R++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A + F  ME  G   N FSY+ILIN  C     E AL LY EML + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 243 IGL---FEIHQVE 252
             L   +++H V+
Sbjct: 678 KNLHRDYQVHAVQ 690



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 90/190 (47%)

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A ++Y  M   GIKPTVVTYNT+     +  +V++A +L  EMQ  G   +   Y  
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GL K G + +A  L   +      +   +Y+ LI+G C+ G    A++L   +    
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
               + TYN +++ LC   ++      F DM      PD V+FN+L+ G  R    S+  
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 396 ELLHRMDERN 405
            L   +  R+
Sbjct: 376 LLFDELKCRD 385



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 15/233 (6%)

Query: 155 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +M Q   + + FV+  ++D   G  L        E  VS E  G         +LI G+ 
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGV------VDVLIAGHV 162

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
                   L ++ +M+  G+ P V   N +   L + + + +A  ++  M++ G+     
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y T +D  CK G + +ALEL   ++   C  +  +Y+ L++GL K G L+ A  L   +
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               L     TYN +I+  C  G   +A DL  +M  +   P    +NTLM G
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +FD+M R+G+  D       +  L     + +A  ++  +     +  + +Y+ ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GR+  A EL   +       + VTYN++++ L   G++++A  L  +M   G+     
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N L+ G  +     +  +L+  M  R
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNR 314


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 182/325 (56%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD   +  ++  LCKE  +++A+ L  ++  + + P VV++N++I G+C + + ++  RL
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              MM+  V P+V T+SV+++ LCK G++++A++L   M   G+ PN   + TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           TGR +   E++  M   G K +V +Y+ LING CK  ++  A  L  EM  +G+KP   T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G  +   +E A ++  EM + G+  D  A+   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  +Y+ +I G CK G +K  ++L   +     +  VVTYN++++ LC  G+M 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A+ L   M   GV PD + +N L+
Sbjct: 523 NANMLLDAMLNLGVVPDDITYNILL 547



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTK-LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            A+++FT  L+A G   + + +S L+N    +G+   A+  F  +   N +        +
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HS 192

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  + D L K      A     ++ D    PDV  +N ++   C  +  NEA+ LF E
Sbjct: 193 CGY--LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++P VV+F+ +++  CK+G +++  +L   M++  V P+ F Y+ L++G C  G+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A +LF+ M   G   N  +++ LING+C     +  + +Y +ML KG+KP V+TYNT
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++  +  A KL  EM + G+  D + Y   IDG CK G +  ALE+ + +    
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            ELD  +++ LI G C+ G++  A      +    +  D  TY ++IH  C  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M+  G  P  V +N L+ G  +  +      LL  M
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 174/325 (53%), Gaps = 12/325 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF ++   G  P V++++TLING C++G+      L   M+  N  F     PD  
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVF 296

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+GLCKEG +D A +L L+M D+ + P+ VT+ ++I G C    ++    ++ +M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+P+V+T++ +++ LCK G + EA +L+  M Q G++P+ F Y  L+DG C  G +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M   G + +  +++ LI+G+C+  ++  A     EML  GIKP   TY  +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWE 326
             D  +Y+ L++      R   AW+
Sbjct: 537 VPDDITYNILLE------RTLQAWK 555



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 17/358 (4%)

Query: 63  YTTIIDGLCKEGFVDKAKELL---LQMKDKNINPDVVTYNSVIRGFCYAN---------- 109
           Y T+   LC    + +A+ LL   +  K KN    V T     RG   +N          
Sbjct: 106 YCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAY 165

Query: 110 -DS---NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
            DS   ++A + F  +    +Q    +   + D L K      A    E ++  G  P+ 
Sbjct: 166 TDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDV 225

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             +N LM   C   ++N A+ LF  +   G +  V S++ LINGYCK+  ++    L   
Sbjct: 226 CKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRF 285

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+   + P V TY+ L  GL +  Q++ A KLF EM   G+  +   + T I+G C  G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
               +E+++ +     + D+ +Y+ LI+GLCK G L+ A +L   + +  L  D  TY +
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +I   C +G ++ A ++  +M  +G+  D VAF  L+ G  R  +  +    L  M E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLE 463



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + GK   +S    ++   G   +  V++ LM+ +  +G  + A + F  +     +    
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S   L +   K      A + Y E+L  G  P V  +N L   L + H++  A  LF E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
            + G+     ++ T I+G CK+G + +   L R +   +   D+ +YS LI+GLCK G+L
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +LF  +    L+ + VT+  +I+  C  G+ D   +++  M  KGV PD + +NTL
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           + G  +  +  +  +L+  M +R
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQR 394



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA     ++   G +P+  TY+ +I+G C+ G       L +EM   +G       P  
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM-QCDGHV-----PGV 505

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
           V Y  +++GLCK+G +  A  LL  M +  + PD +TYN
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 6/368 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY T+++G C  G    A+ L +EM     E       +A +YT++I  LC +G V
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLE------SNATVYTSVIALLCNKGQV 338

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A  +L  M    +  D V + +VI GFC   D   A+RLF EM  +G+  + VT + +
Sbjct: 339 SDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LC+ G+++EA ++L+ M+  G+  +   Y  L+DG+C  G +  A  +   M     
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV +Y+ L +G CK  ++  A  L  EM +KG++  V TYN+L  GL +   +E+A +
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +  EM+  G   D + Y T ID LCK+G    A  + + +     +  I +Y+ L++G C
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            SGR++   +L   +    +  +VVTYN ++   C D  M    +++  M ++ VAP+  
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNEN 638

Query: 377 AFNTLMLG 384
            +N L+ G
Sbjct: 639 TYNILIKG 646



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 196/379 (51%), Gaps = 8/379 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   +   G   + + ++T+I+G C  G    A  LFEEM     + G+    D V
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM----QKRGLAA--DRV 393

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I+GLC+ G + +A  +L +M DK ++ DVVTY  +I G+C   +  EA R+  EM
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNVVT++ + D LCK G +  A++LL  M   G+  N + YN+L++G C  G +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  +   ME+ G + +V++Y+ LI+  CK+ E + A ++  EML KGIKP++ TYN L
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +VE   KL + M    V  +   Y + +   C +  +    E+++ +   + 
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y+ LI G CK+  +K A      +    L     +Y+ +I  L    K  +A  
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 362 LFLDMEAKGVA--PDCVAF 378
            F  M  +G+   PD  +F
Sbjct: 694 FFDKMRNEGLTAEPDVYSF 712



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++ A G E N   Y+++I  LC  G    AL + E+M       GV    DAV+
Sbjct: 306 AVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT----MHGVAL--DAVV 359

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT+I G C +G +  A+ L  +M+ + +  D VT+ ++I G C A +  EA R+  EM+
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  +VVT++V++D  CK G M EA ++   M+   V PN   Y  L DG C  G V 
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M + G + NV++Y+ LING CK   +E A+ + +EM + G +  V TY TL 
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  + +RA  +  EM   G+      Y   ++G C +G +    +L   +      
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ L+   C    +K   E++  +    +  +  TYNI+I   C    M +A   
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYF 659

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
             +M  KG+     +++ L+
Sbjct: 660 HQEMIEKGLRLTASSYSALI 679



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 203/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +L+ +G  P+  + + +++ L        A+ LF E+ + N     VC    
Sbjct: 210 LPSAELLRRLRQYGLSPSPESCNAVLSRLPLDE----AIALFRELPDKN-----VCS--- 257

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  ++  L   G +  A +   +M      PDVVTY +++ G+C   +   A +L  E
Sbjct: 258 --HNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDE 312

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N   ++ ++  LC  G++ +A ++LE M   GV  +A V+ T++ GFC  G 
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+ LF  M+  G   +  +++ LING C+  E++ A  +  EM+ KG+   VVTY  
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   +  AF++ +EM    VA +   Y    DGLCK G +  A EL   +    
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL++ +Y+ LI+GLCK G L+ A  +   +       DV TY  +I  LC  G+ D+AH
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  +M  KG+ P    +N LM G   +       +LL  M E+N
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 148/262 (56%), Gaps = 6/262 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+TY+ L +GLC+ G    A  L  EM N   E  V        Y ++I+GLCK G +
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY------TYNSLINGLCKFGNL 513

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  ++ +M+      DV TY ++I   C + + + A  +  EM+D+G++P++ T++V+
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M+  C +G++E   +LLE M++  VRPN   YN+LM  +C+   +    E++  M S   
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N  +Y+ILI G+CK + ++ AL  + EM+ KG++ T  +Y+ L   L +  +   A  
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 257 LFDEMQRHGVAADTWAYRTFID 278
            FD+M+  G+ A+   Y  ++D
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMD 715



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 6/226 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T+++A G   +V TY+TLI+ LC++G    A N+ +EM++     G+  KP   
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK----GI--KPSIA 568

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++G C  G V+  K+LL  M +KN+ P+VVTYNS+++ +C   +      ++  M
Sbjct: 569 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM 628

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q V PN  T+++++   CK   M+EA    + MI+ G+R  A  Y+ L+       + 
Sbjct: 629 HSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKF 688

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A+  F  M + G       YS  ++       +E  ++L  E++
Sbjct: 689 SEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 207/404 (51%), Gaps = 16/404 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +K     P++ TY+ LINGLC  G     L L + M +      +  +PD V
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS------LKLQPDVV 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG  + G   +A++L+ QM++  +  + VT+N  ++  C         R   E+
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +D  G  P++VT+  ++    K G +  A +++  M Q G++ N    NT++D  C   +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L  S    G   +  +Y  LI G+ + +++E AL ++ EM    I PTV T+N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL    + E A + FDE+   G+  D   + + I G CK G + +A E +     +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN--ESIK 584

Query: 301 CELDIRSYSC--LIDGLCKSGRLKIAWELFHSL--PRGVLIADVVTYNIMIHALCADGKM 356
                 +Y+C  L++GLCK G  + A   F++L   R V   D VTYN MI A C D K+
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV---DTVTYNTMISAFCKDKKL 641

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
            +A+DL  +ME KG+ PD   +N+ +   + + + S+  ELL +
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 205/397 (51%), Gaps = 8/397 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +   G   NV T++ L+NG C  G    AL + E M++   EF V   PD V 
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--NPDNVT 242

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TI+  + K+G +   KELLL MK   + P+ VTYN+++ G+C      EA ++ +E+M
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELM 301

Query: 123 DQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            Q  V P++ T++++++ LC  G M E  +L++ M  + ++P+   YNTL+DG    G  
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPTVVTYNT 240
             A++L   ME+ G K N  +++I +   CK ++ E       E++   G  P +VTY+T
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     ++  +  A ++  EM + G+  +T    T +D LCK   + EA  L  +     
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             +D  +Y  LI G  +  +++ A E++  + +  +   V T+N +I  LC  GK + A 
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           + F ++   G+ PD   FN+++LG  +     K  E 
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 208/401 (51%), Gaps = 10/401 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   +K  G  PN +TY+ L+ G C+ G    A  + E M   N        PD   Y  
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN------VLPDLCTYNI 315

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+GLC  G + +  EL+  MK   + PDVVTYN++I G      S EA++L  +M + G
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRA 184
           V+ N VT ++ +  LCK  K E  ++ ++ ++ + G  P+   Y+TL+  +   G ++ A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            E+   M   G K N  + + +++  CK ++++ A +L +    +G     VTY TL +G
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F   +VE+A +++DEM++  +      + + I GLC +G    A+E F  L       D
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +++ +I G CK GR++ A+E ++   +     D  T NI+++ LC +G  +KA + F 
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615

Query: 365 DM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + E + V  D V +NT++    ++ +  +  +LL  M+E+
Sbjct: 616 TLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 191/372 (51%), Gaps = 14/372 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L   +K+   +P+V+TY+TLI+G    G ++ A  L E+M N     GV  K + V
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQV 381

Query: 62  IYTTIIDGLCKE----GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            +   +  LCKE        K KEL+        +PD+VTY+++I+ +    D + A  +
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDM---HGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +G++ N +T + I+D LCK  K++EA  LL    + G   +   Y TL+ GF  
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             +V +A E++  M+ +     V +++ LI G C + + E A+  + E+   G+ P   T
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N++ +G  +  +VE+AF+ ++E  +H    D +     ++GLCK G   +AL  F TL 
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL- 617

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           I + E+D  +Y+ +I   CK  +LK A++L   +    L  D  TYN  I  L  DGK+ 
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLS 677

Query: 358 KAHDLFLDMEAK 369
           +  +L      K
Sbjct: 678 ETDELLKKFSGK 689



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 30/332 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+++TY TLI    + G    AL +  EM    G+ G+  K + +   TI+D LCKE
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREM----GQKGI--KMNTITLNTILDALCKE 464

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D+A  LL     +    D VTY ++I GF       +A  ++ EM    + P V TF
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC +GK E A +  + + + G+ P+   +N+++ G+C  GRV +A E +     
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
              K + ++ +IL+NG CK    E AL+ ++ ++ +    TV TYNT+     +  +++ 
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKE 643

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL--------RILKCELDI 305
           A+ L  EM+  G+  D + Y +FI  L ++G + E  EL +          R L+ E + 
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEK 703

Query: 306 R---------------SYSCLIDGLCKSGRLK 322
                           +YS +ID LC  GRLK
Sbjct: 704 NPATSESKEELNTEAIAYSDVIDELCSRGRLK 735



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 175/384 (45%), Gaps = 40/384 (10%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS---NEA 114
           P   ++   +     EG    A ++  +M    + P+++T N+++ G      S   + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMD 173
           + +F +M+  GV  NV TF+V+++  C  GK+E+A  +LE M+ +  V P+   YNT++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 174 GFCLTGRVNRAKELFVSMESMG---------------CK----------------HNVF- 201
                GR++  KEL + M+  G               CK                 NV  
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 202 ---SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
              +Y+ILING C    +   L L   M S  ++P VVTYNTL  G FE+     A KL 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC-ELDIRSYSCLIDGLCK 317
           ++M+  GV A+   +   +  LCK           + L  +     DI +Y  LI    K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G L  A E+   + +  +  + +T N ++ ALC + K+D+AH+L      +G   D V 
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           + TL++G  R  +  K +E+   M
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEM 512



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 39/207 (18%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ---VERAFKLFD 259
           + I ++ Y    +   AL ++ +M+   +KP ++T NTL IGL        +  A ++FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M + GV+                                   L++++++ L++G C  G
Sbjct: 194 DMVKIGVS-----------------------------------LNVQTFNVLVNGYCLEG 218

Query: 320 RLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           +L+ A  +   +     +  D VTYN ++ A+   G++    +L LDM+  G+ P+ V +
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           N L+ G  +     +  +++  M + N
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTN 305



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 30/159 (18%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+  T + L+NGLC+ G T  ALN F  +I          + D V Y T+I   CK+  
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-------EVDTVTYNTMISAFCKDKK 640

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM------MDQGVQ-- 127
           + +A +LL +M++K + PD  TYNS I         +E   L  +       M + +Q  
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVE 700

Query: 128 ---------------PNVVTFSVIMDELCKNGKMEEASQ 151
                             + +S ++DELC  G+++E S+
Sbjct: 701 TEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 216/410 (52%), Gaps = 13/410 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +  K+      PNV TY+ L+NGLCR+  T +A  +F+EM   NG     CKP+ 
Sbjct: 105 MDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM-KRNG-----CKPNP 158

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+I  L + G +D+A  ++++ +   +  DV+T  +++ G C A+  ++A +   E
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEE 218

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-MIQIGVRPNAFVYNTLMDGFCLTG 179
           M   GV+PN VT+S ++    ++G+++   +  E    + G    A  Y   +D  C  G
Sbjct: 219 MRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAG 278

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++RA++    +   G   +V +YS+LIN + +  + + +L L  +M   G+KP VVTY+
Sbjct: 279 YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYS 338

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL   L +  + + AF+L + M+  G   +   Y + +DGLCK+G + E   ++  +   
Sbjct: 339 TLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C  D+ +YS +++GL K+G L  A +LF  +       D   Y+++I +LC  GK+++A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458

Query: 360 HDLFLDMEAKGVAPD--CVAFNTLMLG---CIRNNETSKVVELLHRMDER 404
             ++  ME   VA D  C A   L+       R +   ++VE+      R
Sbjct: 459 CGMYHGMEVT-VAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHR 507



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 183/340 (53%), Gaps = 5/340 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++DGLC  G  ++A EL+ ++      P V  YN +I G C A+   +A ++  +M+
Sbjct: 57  YKLVVDGLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMV 115

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + PNV T++++++ LC++ K + A ++ + M + G +PN   Y TL+      G ++
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  + +   S+    +V + + ++ G CK   ++ AL    EM   G++P  VTY+ L 
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235

Query: 243 IGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            G  +  +++R  + F+E + R G + +  AY  ++D LCK GY+  A +    LR    
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGV 295

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS LI+   ++G+   + EL   + R  +  DVVTY+ +I+ LC + K   A  
Sbjct: 296 VPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFR 355

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN---NETSKVVELL 398
           L   MEA G  P+ V +N++M G  ++   +E  +V E++
Sbjct: 356 LLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMM 395



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 37/324 (11%)

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           AK L   +++ G + +   F+++  +L +  K  E  +L  L+   GV      Y  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G  N+A EL   +  +     VF Y+ +I G C+   +  A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            V TY  L  GL   ++ + A ++F EM+R+G   +   Y T I  L + G I EAL + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH----- 348
              R L+   D+ + + ++ GLCK+ RL  A +    + +  +  + VTY+ ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 349 -------------------------------ALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                                          ALC  G +D+A     ++   GV PD V 
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++ L+    R  +    +ELL  M
Sbjct: 302 YSMLINTFARAGQFDASLELLEDM 325


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 202/387 (52%), Gaps = 7/387 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V TY+TL+ GLC  G    A+ + +EM +      +   PD V Y T+IDG  K     
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMES------LKLIPDVVTYNTLIDGCFKWRGST 189

Query: 78  KAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           +   LL +MK +  + P+ VT+N +++ F      NEA    ++M++ GV P+  T++ +
Sbjct: 190 EGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM 249

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++  CK GK+ EA ++++ M + G++P+    NT++   C+  +   A EL V     G 
Sbjct: 250 INGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGY 309

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +  +Y  LI GY K K+ + AL L+ EM  +GI P+VV+YN L  GL    + ++A  
Sbjct: 310 ILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVD 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
             +E+   G+  D  +    I G C  G + +A +    +     + DI + + L+ GLC
Sbjct: 370 KLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC 429

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +   L+ A++LF+S        DVVTYN MI  LC +G++D+A DL  DME K   PD  
Sbjct: 430 RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQY 489

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            +N ++        T +  + + ++ E
Sbjct: 490 TYNAIVRALTHAGRTEEAEKFMSKLSE 516



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 53/441 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++++    P+V+TY+TLI+G  +   +     L EEM +  G      +P+AV
Sbjct: 155 EAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGG-----VEPNAV 209

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++    KEG +++A + +++M +  ++PD  TYN++I GFC A    EA R+  EM
Sbjct: 210 THNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEM 269

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQ------------------------------ 151
             +G++P++ T + ++  LC   K EEA +                              
Sbjct: 270 ARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQE 329

Query: 152 -----LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                L E M + G+ P+   YN L+ G CL+G+ ++A +    +   G   +  S +I+
Sbjct: 330 DKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNII 389

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GYC    ++ A   +++M+    KP + T N L  GL  +  +E+AFKLF+       
Sbjct: 390 IHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQN 449

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           + D   Y T I  LCK G + EA +L   + + K E D  +Y+ ++  L  +GR + A +
Sbjct: 450 SVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEK 509

Query: 327 LF------------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
                         H   + +  +  + Y+  I  LC  GK  +A  LF + E KGV+ +
Sbjct: 510 FMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLN 569

Query: 375 CVAFNTLMLGCI-RNNETSKV 394
              +  LM G + R    SKV
Sbjct: 570 KYTYIKLMDGFLKRRKSISKV 590



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + YNTL+ G C  G+++ A  +   MES+    +V +Y+ LI+G  K +       L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 224 SEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
            EM S+G ++P  VT+N +     +  ++  A     +M   GV+ D + Y T I+G CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
            G + EA  +   +     + DI + + ++  LC   + + A+EL     +   I D VT
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           Y  +I       + DKA  L+ +M+ +G+ P  V++N L+ G   + +T + V+ L+ + 
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 403 ER 404
           E+
Sbjct: 376 EK 377



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 39/137 (28%)

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY------------------- 343
           +D+ +Y+ L+ GLC  G++  A  +   +    LI DVVTY                   
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194

Query: 344 -----------------NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                            NIM+     +GK+++A D  + M   GV+PDC  +NT++ G  
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFC 254

Query: 387 RNNETSKVVELLHRMDE 403
           +     K+ E    MDE
Sbjct: 255 K---AGKLGEAFRMMDE 268


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 214/433 (49%), Gaps = 35/433 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF--------- 52
           EA  L  K+K F C P+ ++Y+T+++ LC+ G    A +L  +M N NG F         
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGLFPNRNTFNIL 124

Query: 53  -GVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
               CK                    PD   YTT+I GLCK+G +D+A  L  +M++  +
Sbjct: 125 VSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL 184

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P VVTYN +I G    + S +   L  EM  +GV+PN VT++V++    K GKM+ A  
Sbjct: 185 LPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            L  M + G  P+   +NTL +G+C  GR++ A  +   M   G K N  + + +++  C
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
             ++++ A  L S    +G     V+Y TL +G F++ +       +DEM+   +     
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSII 360

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y T I GLC++G   ++++    L       D  +Y+ +I G C+ G++  A+   + +
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            +     D+ T NI++  LC +G +DKA  LF    +KG A D V FNT++ G       
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRF 480

Query: 392 SKVVELLHRMDER 404
            +  +LL  M+E+
Sbjct: 481 EEAFDLLAEMEEK 493



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 204/403 (50%), Gaps = 10/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           + A+F+ +   G E N  T++ LI G C       A+ L  +M +        C PD V 
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKH------FSCFPDNVS 85

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TI+D LCK+G +++A++LLL MK+  + P+  T+N ++ G+C      EA  +   M 
Sbjct: 86  YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+V T++ ++  LCK+GK++EA +L + M  + + P+   YN L++G        
Sbjct: 146 RNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSL 205

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  EL   ME  G K N  +Y++++  Y K  +++ A +   +M   G  P  VT+NTL 
Sbjct: 206 KGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLS 265

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  ++  AF++ DEM R G+  ++    T +  LC    + +A +L  +       
Sbjct: 266 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 325

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D  SY  LI G  K G+    W+    +    +I  ++TY  MI  LC  GK D++ D 
Sbjct: 326 VDEVSYGTLIMGYFKVGK-SXXWD---EMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDK 381

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             ++   G+ PD   +NT++LG  R  +  K     ++M +++
Sbjct: 382 CNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 190/373 (50%), Gaps = 10/373 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++     P+V+TY+ LING      ++    L +EM  G G      KP+AV
Sbjct: 171 EAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM-EGKG-----VKPNAV 224

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++    KEG +D A   L +M++   +PD VT+N++  G+C A   +EA R+  EM
Sbjct: 225 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ N VT + I+  LC   K+++A +LL    + G   +   Y TL+ G+   G+ 
Sbjct: 285 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS 344

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E    M+      ++ +Y  +I G C++ + + ++   +E+L  G+ P   TYNT+
Sbjct: 345 XXWDE----MKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTI 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G     QV++AF   ++M +     D +     + GLC  G + +AL+LF+T      
Sbjct: 401 ILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGK 460

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D  +++ +I GLC+ GR + A++L   +    L  D  T+N ++ AL   G+M +A +
Sbjct: 461 AIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEE 520

Query: 362 LFLDMEAKGVAPD 374
               +  +G   D
Sbjct: 521 FMSGIVEQGKLQD 533



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 163/331 (49%), Gaps = 3/331 (0%)

Query: 57  KPDAVIYTTIIDGLCK---EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE 113
           KP+ +   T+I  L +   +  V  +K +   +    +  +  T+N +I G C  N  +E
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A  L  +M      P+ V+++ I+D LCK GK+ EA  LL  M   G+ PN   +N L+ 
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C  G +  A E+   M       +V +Y+ LI G CK+ +I+ A  L  EM +  + P
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            VVTYN L  G FE     + F+L DEM+  GV  +   Y   +    K G +  A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
           R +       D  +++ L +G CK+GRL  A+ +   + R  L  + VT N ++H LC +
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            K+D A+ L      +G   D V++ TL++G
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 179/385 (46%), Gaps = 22/385 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K++  G  P+ +T++TL NG C+ G    A  + +EM           K ++V 
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG------LKMNSVT 295

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             TI+  LC E  +D A +LL     +    D V+Y ++I G+     S      + EM 
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMK 351

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + P+++T+  ++  LC++GK +++      +++ G+ P+   YNT++ G+C  G+V+
Sbjct: 352 EKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVD 411

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A      M     K ++F+ +IL+ G C    ++ AL L+   +SKG     VT+NT+ 
Sbjct: 412 KAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTII 471

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL E  + E AF L  EM+   +  D + +   +  L   G + EA E    + + + +
Sbjct: 472 SGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI-VEQGK 530

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L  ++ S     L K      +     S P  V  ++       I+ LC  GK   A  +
Sbjct: 531 LQDQTIS-----LNKRKTESSSETSQESDPNSVAFSE------QINELCTQGKYKDAMHM 579

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIR 387
             +   KG+      + +LM G I+
Sbjct: 580 IQESTQKGIILHKSTYISLMEGLIK 604



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 138/282 (48%), Gaps = 3/282 (1%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEE---ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++PN++T + ++  L +         +  +   +I++GV  N   +N L+ G C+  +++
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M+   C  +  SY+ +++  CK  ++  A  L  +M + G+ P   T+N L 
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  ++  ++ A ++ D M R+ V  D   Y T I GLCK+G I EA  L   +  LK  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ LI+G  +       +EL   +    +  + VTYN+++     +GKMD A + 
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              ME  G +PDCV FNTL  G  +    S+   ++  M  +
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRK 287


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 202/405 (49%), Gaps = 9/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A  L   +   GC P+V+TY+ L+   C+      A+ L + M + G       C P  
Sbjct: 170 DALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG-------CTPTN 222

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  I+DG+C+EG VD A+ELL  +      P+ V YN+V++G   A    + + L  E
Sbjct: 223 VTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAE 282

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P+  T SV++  LC+ G  + A +LLE M +     N   YN ++ G C  G 
Sbjct: 283 MFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH 342

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A  L  +M++ GCK N+F+Y+IL+ G C  +  E A  L ++M      P ++T+NT
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +     +A ++F +M   G   ++  Y + I+GL K G + ++LEL   +    
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +I +Y  L + L +  +L  A ++ H L    +    V YN ++  LC +GK D+A 
Sbjct: 463 FNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D+  +M + G  PD   ++ L+ G        +  ELL  +  R+
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 195/390 (50%), Gaps = 12/390 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+V   + L+  LCR G    A  + E   +            AV Y+ + DG C+ G
Sbjct: 84  CPPDVALANRLVRDLCRRGRPADAARVVEACGSA---------ATAVTYSALADGYCRVG 134

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +D+A+ ++  M    + P    YN ++   C      +A  L   M+ +G  P+VVT++
Sbjct: 135 RLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYN 191

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++++  CK     +A +L++LM   G  P    YN +MDG C  G V+ A+EL  S+ S 
Sbjct: 192 ILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSY 251

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  N  +Y+ ++ G       E    L +EM S+   P+  T + +   L +    +RA
Sbjct: 252 GCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRA 311

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +L ++M +H   A+   Y   + GLC+ G++  AL L   ++   C+ +I +Y+ L+ G
Sbjct: 312 IRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKG 371

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC + R + A +L   + +   + D++T+N +I  LC  G   +A ++F  M  KG  P+
Sbjct: 372 LCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPN 431

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V +++++ G  +  +  + +ELL+ M  +
Sbjct: 432 SVTYSSVIEGLAKTGKMEQSLELLNEMGSK 461



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 200/427 (46%), Gaps = 45/427 (10%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++A G     +TYS L +G CR G    A  + +         G+   P A  Y  ++  
Sbjct: 111 VEACGSAATAVTYSALADGYCRVGRLDEARRVVD---------GMPVLPSAYAYNPLMHA 161

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC  G V  A  LL  M  +   PDVVTYN ++   C      +A  L   M  +G  P 
Sbjct: 162 LCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPT 221

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT++VIMD +C+ G ++ A +LL  +   G  PN   YNT++ G    GR    +EL  
Sbjct: 222 NVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIA 281

Query: 190 SMESMGC-------------------------------KH----NVFSYSILINGYCKNK 214
            M S  C                               KH    N+ +Y+ +++G C+  
Sbjct: 282 EMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQG 341

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++GAL L S M + G KP + TYN L  GL    + E A  L  +M +     D   + 
Sbjct: 342 HVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFN 401

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
           T I  LC+ G  ++A+E+F+ +    C  +  +YS +I+GL K+G+++ + EL + +   
Sbjct: 402 TIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSK 461

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               + + Y+++   L  + K+ +A  +   ++  G++P  V +NT++LG  RN +T + 
Sbjct: 462 GFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQA 520

Query: 395 VELLHRM 401
           +++L  M
Sbjct: 521 IDILSNM 527



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 168/342 (49%), Gaps = 7/342 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   L ++GC PN + Y+T++ GL   G       L  EM + N      C P    
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSEN------CPPSEAT 294

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            + +I  LC+EG   +A  LL +M   +   ++VTYN+V+ G C     + A  L   M 
Sbjct: 295 LSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQ 354

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN+ T+++++  LC   + E+A  L+  M Q    P+   +NT++   C  G   
Sbjct: 355 TDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTM 414

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A E+F  M   GC  N  +YS +I G  K  ++E +L L +EM SKG  P +  Y+ L 
Sbjct: 415 QAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLA 473

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L E  ++  A ++  ++Q  G++     Y T + GLC+NG   +A+++   +    C 
Sbjct: 474 ECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCM 533

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            D  +YS LI GL   G +K A EL  +L    +I D +  N
Sbjct: 534 PDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 9/269 (3%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L   G+++ A +++E  +     P+  + N L+   C  GR   A  +   +E+ G 
Sbjct: 63  LSSLVHRGELDAALRVVESSL---CPPDVALANRLVRDLCRRGRPADAARV---VEACGS 116

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                +YS L +GYC+   ++ A  +   M    + P+   YN L   L    QV  A  
Sbjct: 117 AATAVTYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALV 173

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D M   G A D   Y   ++  CK     +A+EL   +R+  C     +Y+ ++DG+C
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + G +  A EL +SLP      + V YN ++  L   G+ +   +L  +M ++   P   
Sbjct: 234 REGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEA 293

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
             + ++    +     + + LL +M + +
Sbjct: 294 TLSVVISSLCQEGLFQRAIRLLEKMSKHD 322



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 7/156 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  +F ++   GC PN +TYS++I GL +TG    +L L  EM  G+  F     P+ 
Sbjct: 414 MQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEM--GSKGF----NPE- 466

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  + + L +E  + +A +++ +++D  I+P  V YN+++ G C    +++A  +   
Sbjct: 467 INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSN 526

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           M+  G  P+  T+S+++  L   G M+EA +LL  +
Sbjct: 527 MVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 194/382 (50%), Gaps = 9/382 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF ++    C PN +T+  L+   CR G    A+ + + M     E G  C  +  +   
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM----SEHG--CTANTTLCNI 317

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I+ +CK+G VD A E L  M     +PD ++Y +V++G C A    +AK L  EM+ + 
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN VTF+  +  LC+ G +++A  L+E M + G       YN L++GFC+ GRV+ A 
Sbjct: 378 CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL 437

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF    S+ C+ N  +Y+ L+ G C  + ++ A  L +EM+       VVT+N L    
Sbjct: 438 ELF---NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFF 494

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   VE A +L  +M  HG   +   + T +DG+ ++    EALEL   L      LD 
Sbjct: 495 CQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDT 554

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS ++D L +  R++ A ++FH++    +    V YN ++ ALC   + D+A D F  
Sbjct: 555 ITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAH 614

Query: 366 MEAKGVAPDCVAFNTLMLGCIR 387
           M +    P+   +  L+ G  R
Sbjct: 615 MVSNSCMPNESTYVILIEGLAR 636



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 206/465 (44%), Gaps = 76/465 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +    +  G   +V  Y+TL+ G CR G    A  L   M            PDA 
Sbjct: 88  DAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---------PVPPDAY 138

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLC  G V  A  LL  M  +   P VVTY  ++   C ++   +A ++  EM
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG------- 174
             +G  PN+VT++VI++ +C+  ++++A Q+L  +   G +P+   Y T++ G       
Sbjct: 199 RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW 258

Query: 175 ----------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                       FC  G V RA E+   M   GC  N    +I+
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIV 318

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK   ++ A    + M S G  P  ++Y T+  GL    + E A +L +EM R   
Sbjct: 319 INSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNC 378

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   + TFI  LC+ G I +A+ L   +    C + I +Y+ L++G C  GR+  A E
Sbjct: 379 PPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALE 438

Query: 327 LFHSLP-----------------------RGVLIAD---------VVTYNIMIHALCADG 354
           LF+SLP                          L+A+         VVT+N+++   C  G
Sbjct: 439 LFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKG 498

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            +++A +L   M   G  P+ + FNTL+ G   +  + + +ELLH
Sbjct: 499 FVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH 543



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 194/400 (48%), Gaps = 9/400 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  +  + G  P+V   + LI  LCR G T  A  +      G+G        D  
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL-RTAEGSGA-----PVDVF 106

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G C+ G +D A+ L+  M    + PD  TY  +IRG C      +A  L  +M
Sbjct: 107 AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDM 163

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  QP+VVT++V+++ +CK+    +A ++L+ M   G  PN   YN +++G C   RV
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+++   + S G + +  SY+ ++ G C  K  E    L+ EM+     P  VT++ L
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    VERA ++ D M  HG  A+T      I+ +CK G + +A E    +    C
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC 343

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SY+ ++ GLC++GR + A EL + + R     + VT+N  I  LC  G +D+A  
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M   G +   V +N L+ G          +EL + +
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 212/434 (48%), Gaps = 38/434 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L   +    C+P+V+TY+ L+  +C++     A+ + +EM    G     C P+ V
Sbjct: 155 DALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM-RAKG-----CTPNIV 208

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II+G+C+E  VD A+++L ++      PD V+Y +V++G C A    + + LF EM
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++    PN VTF +++   C+ G +E A ++L+ M + G   N  + N +++  C  GRV
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E   +M S GC  +  SY+ ++ G C+    E A  L +EM+ K   P  VT+NT 
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTF 388

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA--------------------------------AD 269
              L +   +++A  L ++M  +G +                                 +
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPN 448

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
           T  Y T + GLC    +  A EL   +    C L++ +++ L+   C+ G ++ A EL  
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQ 508

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +       +++T+N ++  +  D   ++A +L   + +KG++ D + +++++    R +
Sbjct: 509 QMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRED 568

Query: 390 ETSKVVELLHRMDE 403
              + V++ H + +
Sbjct: 569 RIEEAVQMFHAVQD 582



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 207/435 (47%), Gaps = 44/435 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  +++A GC PN++TY+ +ING+CR      A     +++N    +G   +PD V
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA----RQILNRLSSYGF--QPDTV 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ GLC     +  + L  +M + N  P+ VT++ ++R FC       A  +   M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   N    +++++ +CK G++++A + L  M   G  P+   Y T++ G C  GR 
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363

Query: 182 NRAKELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
             AKEL   M                                E M   GC   + +Y+ L
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNAL 423

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+C    ++ AL L++ +     +P  +TY TL  GL    +++ A +L  EM ++  
Sbjct: 424 VNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDC 480

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   +   +   C+ G++ EA+EL + +    C  ++ +++ L+DG+ +    + A E
Sbjct: 481 PLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L H L    +  D +TY+ ++  L  + ++++A  +F  ++  G+ P  V +N ++    
Sbjct: 541 LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALC 600

Query: 387 RNNETSKVVELLHRM 401
           +  ET + ++    M
Sbjct: 601 KRCETDRAIDFFAHM 615



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 186/369 (50%), Gaps = 9/369 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++   GC  N    + +IN +C+ G    A     E +N  G +G  C PD + 
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF----EFLNNMGSYG--CSPDTIS 349

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT++ GLC+ G  + AKELL +M  KN  P+ VT+N+ I   C     ++A  L  +M 
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP 409

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G    +VT++ +++  C  G+++ A   LEL   +   PN   Y TL+ G C   R++
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGRVDSA---LELFNSLPCEPNTITYTTLLTGLCHAERLD 466

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M    C  NV ++++L++ +C+   +E A+ L  +M+  G  P ++T+NTL 
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLL 526

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G+ E    E A +L   +   G++ DT  Y + +D L +   I EA+++F  ++ +   
Sbjct: 527 DGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMR 586

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
                Y+ ++  LCK      A + F  +     + +  TY I+I  L  +G + +A  +
Sbjct: 587 PKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYV 646

Query: 363 FLDMEAKGV 371
             ++ ++GV
Sbjct: 647 LSELCSRGV 655



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 38/320 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      + ++GC P+ I+Y+T++ GLCR G    A  L  EM+  N      C P+ V
Sbjct: 330 DAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN------CPPNEV 383

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--------------- 106
            + T I  LC++G +D+A  L+ QM +   +  +VTYN+++ GFC               
Sbjct: 384 TFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443

Query: 107 -----------------YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
                            +A   + A  L  EMM      NVVTF+V++   C+ G +EEA
Sbjct: 444 PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            +L++ M++ G  PN   +NTL+DG         A EL   + S G   +  +YS +++ 
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             +   IE A+ ++  +   G++P  V YN +   L +  + +RA   F  M  +    +
Sbjct: 564 LSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPN 623

Query: 270 TWAYRTFIDGLCKNGYIVEA 289
              Y   I+GL + G + EA
Sbjct: 624 ESTYVILIEGLAREGLLKEA 643



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 3/328 (0%)

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A  L+ +   +   PDV     +IR  C    +++A R+       G   +V  ++ ++
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
              C+ G+++ A +L+  M    V P+A+ Y  L+ G C  GRV  A  L   M    C+
Sbjct: 113 AGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V +Y++L+   CK+     A+ +  EM +KG  P +VTYN +  G+    +V+ A ++
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            + +  +G   DT +Y T + GLC      +   LF  +    C  +  ++  L+   C+
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            G ++ A E+   +      A+    NI+I+++C  G++D A +   +M + G +PD ++
Sbjct: 290 GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTIS 349

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDERN 405
           + T++ G  R        ELL+ M  +N
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKN 377



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 138/269 (51%), Gaps = 9/269 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++  +GC   ++TY+ L+NG C  G    AL LF  +          C+P+ +
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---------PCEPNTI 450

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ GLC    +D A ELL +M   +   +VVT+N ++  FC      EA  L  +M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++TF+ ++D + ++   EEA +LL  ++  G+  +   Y++++D      R+
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI 570

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++F +++ MG +     Y+ +++  CK  E + A+  ++ M+S    P   TY  L
Sbjct: 571 EEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVIL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             GL     ++ A  +  E+   GV + +
Sbjct: 631 IEGLAREGLLKEARYVLSELCSRGVLSKS 659


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 194/395 (49%), Gaps = 6/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++  G  P+V TYSTLI   C+      A  + EEM     E G  C  + V Y T+I G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEM----RETG--CSLNVVTYNTLIGG 287

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC+ G +++A     +M+D  + PD  TY ++I G C     ++AK L  EM   G+ PN
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VV +S ++D   + G  +EA ++++ M   GV+PN   Y+ L+ G C  GR+ RA  +  
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M  +G   +  +Y+++I G+ +    E A  L +EM   GI P V TY+ +  GL +I 
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           + ERA  L ++M   G+  + + Y   I G C+ G    A E  + +       D+  Y+
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI GL   G++  A E +  +       +  TY  +IH     G ++KA  L   M   
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           G+ P+   +  ++ G  +++   KV   L  M E+
Sbjct: 588 GLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEK 622



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 203/440 (46%), Gaps = 44/440 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  PNV TYS +INGLC+ G +  A  L E+MI          KP+A 
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG------LKPNAF 489

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  +I G C+EG    A E L +M  +N+ PD+  YNS+I G       +EA   + EM
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G QPN  T+  ++      G +E+A QLL  M+  G+ PN F+Y  +++G+  +  +
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609

Query: 182 NRAKELFVSMESMGCK----------HNVFS-------------------------YSIL 206
            +      SM   G            HN+ S                         Y  L
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSL 669

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK  ++E A+ L  EM  KGI+P +  YN L  G  +   +  A  +F+ +   G+
Sbjct: 670 ISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGL 729

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             +   Y T IDG CK G I +A++L+  +       D   YS L  G   SG L+ A  
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALF 789

Query: 327 LFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +   +  RG  I  + ++N ++H  C  GK+ +       M  K + P  +    +++G 
Sbjct: 790 ITEEMIARGYAI--ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGL 847

Query: 386 IRNNETSKVVELLHRMDERN 405
               + S+   +   + ++N
Sbjct: 848 GEAGKLSEAHTIFVELQQKN 867



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 184/411 (44%), Gaps = 12/411 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-------- 58
           +++ +     P    ++ L   LC  G    A  L ++MI       +V           
Sbjct: 108 WSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGS 167

Query: 59  ----DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
                 V+   ++D   K G V    E++L MKD  + P +   N +++    A+  +  
Sbjct: 168 DQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLL 227

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            ++   M   G+ P+V T+S +++  CK   +E A +++E M + G   N   YNTL+ G
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  G +  A      ME  G   + F+Y  +ING CK    + A  L  EM   G+ P 
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV Y+TL  G       + AFK+  EM   GV  +   Y   I GLCK G +  A  + +
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +  +    D  +Y+ +I+G  +    + A+ L + + +G +  +V TY+I+I+ LC  G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + ++A  L   M A G+ P+   +  L+ G  R    S   E L +M   N
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN 518



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 179/390 (45%), Gaps = 26/390 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + ++   G +PN  TY  LI+G    G+   A  L  +M+N          P+  
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG------LNPNDF 594

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  I++G  K   ++K    L  M +K + PD   Y  VI     +     A  +   +
Sbjct: 595 IYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+ + +  ++   CK   ME+A  LL+ M + G+ P    YN L+DGFC +  +
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +F S+   G   N  +Y+ LI+GYCK  +I  A+ LY+EML++G+ P    Y+ L
Sbjct: 715 SHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVL 774

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +++A  + +EM   G A  + ++ T + G CK G + E ++    +     
Sbjct: 775 AAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDI 833

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-----------GVLIADVVTYNI----- 345
              + +   ++ GL ++G+L  A  +F  L +             L  D++   +     
Sbjct: 834 VPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDV 893

Query: 346 ---MIHALCADGKMDKAHDLFLDMEAKGVA 372
              MI + C  G +DKA  L   + AKG A
Sbjct: 894 IHNMIQSHCKQGYLDKALMLHDALVAKGRA 923


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 207/399 (51%), Gaps = 9/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L + +   G  PNV+T+ TLING C+ G    A +LF+ M     E      PD + 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIA 323

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+IDG  K G +    +L  Q   K +  DVV ++S I  +  + D   A  ++  M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG+ PNVVT+++++  LC++G++ EA  +   +++ G+ P+   Y++L+DGFC  G + 
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L+  M  MG   +V  Y +L++G  K   +  A+    +ML + I+  VV +N+L 
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   +++ + A K+F  M  +G+  D   + T +      G + EAL LF  +  +  E
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y  LID  CK  +  I  +LF  + R  + AD+   N++IH L    +++ A   
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCI---RNNETSKVVELL 398
           F ++    + PD V +NT++ G     R +E  ++ ELL
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 196/381 (51%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  ++  G EP++I YSTLI+G  + G   +   LF + ++         K D V
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG------VKLDVV 357

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++++ ID   K G +  A  +  +M  + I+P+VVTY  +I+G C      EA  ++ ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P++VT+S ++D  CK G +     L E MI++G  P+  +Y  L+DG    G +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A    V M     + NV  ++ LI+G+C+    + AL ++  M   GIKP V T+ T+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   ++E A  LF  M + G+  D  AY T ID  CK+      L+LF  ++  K 
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI   + +I  L K  R++ A + F++L  G +  D+VTYN MI   C+  ++D+A  
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           +F  ++     P+ V    L+
Sbjct: 658 IFELLKVTPFGPNTVTLTILI 678



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 1/336 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++D L  +G V KA +    + ++     +V+ N V++G    +    A RL   ++D G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCG 281

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PNVVTF  +++  CK G+M+ A  L ++M Q G+ P+   Y+TL+DG+   G +    
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF      G K +V  +S  I+ Y K+ ++  A  +Y  ML +GI P VVTY  L  GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  AF ++ ++ + G+      Y + IDG CK G +     L+  +  +    D+
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y  L+DGL K G +  A      +    +  +VV +N +I   C   + D+A  +F  
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M   G+ PD   F T+M   I      + + L  RM
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 201/400 (50%), Gaps = 9/400 (2%)

Query: 7   FTKLKAFGCEPN-VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           F KL   G EP+ V  +  +++ L   G    AL+    ++      G+V          
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS------CNK 257

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GL  +  ++ A  LL  + D    P+VVT+ ++I GFC   + + A  LF  M  +G
Sbjct: 258 VLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+++ +S ++D   K G +    +L    +  GV+ +  V+++ +D +  +G +  A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            ++  M   G   NV +Y+ILI G C++  I  A  +Y ++L +G++P++VTY++L  G 
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +   F L+++M + G   D   Y   +DGL K G ++ A+     +      L++
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             ++ LIDG C+  R   A ++F  +    +  DV T+  ++     +G++++A  LF  
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M   G+ PD +A+ TL+    ++ + +  ++L   M +RN
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRN 595



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 6/315 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ ++ ++   G  PNV+TY+ LI GLC+ G    A  ++ +++    E      P  V 
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME------PSIVT 428

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+++IDG CK G +     L   M      PDVV Y  ++ G         A R  ++M+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            Q ++ NVV F+ ++D  C+  + +EA ++  LM   G++P+   + T+M    + GR+ 
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M  MG + +  +Y  LI+ +CK+ +    L L+  M    I   +   N + 
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             LF+ H++E A K F+ +    +  D   Y T I G C    + EA  +F  L++    
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668

Query: 303 LDIRSYSCLIDGLCK 317
            +  + + LI  LCK
Sbjct: 669 PNTVTLTILIHVLCK 683



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 45/424 (10%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNG-EFGVVCKP-----DAVIYTTIIDGLCKEG 74
           ++ T+ + L R G   VA  +F+EMI   G +F V+        DA +   +++  C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 75  FVDKAKELLL---------------QMKDKNINPDVVT-----YNSVIRG---------- 104
            VDKA E+ +               +M +  I  D V      ++ + RG          
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 105 -------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
                  FC   +  +A      +M++G +  +V+ + ++  L  + ++E AS+LL L++
Sbjct: 221 GFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVL 278

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN   + TL++GFC  G ++RA +LF  ME  G + ++ +YS LI+GY K   + 
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
               L+S+ L KG+K  VV +++      +   +  A  ++  M   G++ +   Y   I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            GLC++G I EA  ++  +     E  I +YS LIDG CK G L+  + L+  + +    
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVV Y +++  L   G M  A    + M  + +  + V FN+L+ G  R N   + +++
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518

Query: 398 LHRM 401
              M
Sbjct: 519 FRLM 522



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 56/326 (17%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI----------- 157
           ++ N A + F      G  P   +F  I   L +NG  + A ++ + MI           
Sbjct: 81  SEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLG 137

Query: 158 QIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--------------------- 195
            I  R  +A V   LM+  C  G V++A E+FV    +G                     
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197

Query: 196 ----------CKHNVFSYSILING------YCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
                     C+  +    +  +G      +CK  E+  AL  +  ++ +G +  +V+ N
Sbjct: 198 DLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRVGIVSCN 256

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  GL  + Q+E A +L   +   G A +   + T I+G CK G +  A +LF+ +   
Sbjct: 257 KVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             E D+ +YS LIDG  K+G L +  +LF  +L +GV + DVV ++  I      G +  
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL-DVVVFSSTIDVYVKSGDLAT 374

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG 384
           A  ++  M  +G++P+ V +  L+ G
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKG 400


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 207/399 (51%), Gaps = 9/399 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L + +   G  PNV+T+ TLING C+ G    A +LF+ M     E      PD + 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIA 323

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+IDG  K G +    +L  Q   K +  DVV ++S I  +  + D   A  ++  M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG+ PNVVT+++++  LC++G++ EA  +   +++ G+ P+   Y++L+DGFC  G + 
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L+  M  MG   +V  Y +L++G  K   +  A+    +ML + I+  VV +N+L 
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   +++ + A K+F  M  +G+  D   + T +      G + EAL LF  +  +  E
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y  LID  CK  +  I  +LF  + R  + AD+   N++IH L    +++ A   
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623

Query: 363 FLDMEAKGVAPDCVAFNTLMLG---CIRNNETSKVVELL 398
           F ++    + PD V +NT++ G     R +E  ++ ELL
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 207/383 (54%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ ++   G EP+++TYS+LI+G C+ G+      L+E+MI       +   PD V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVV 462

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  ++DGL K+G +  A    ++M  ++I  +VV +NS+I G+C  N  +EA ++F  M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+V TF+ +M      G++EEA  L   M ++G+ P+A  Y TL+D FC   + 
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M+      ++   +++I+   K   IE A   ++ ++   ++P +VTYNT+
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A ++F+ ++      +T      I  LCKN  +  A+ +F  +     
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y CL+D   KS  ++ +++LF  +    +   +V+Y+I+I  LC  G++D+A +
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F       + PD VA+  L+ G
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRG 785



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 202/432 (46%), Gaps = 29/432 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
            A  LF  ++  G EP++I YSTLI+G  + G   +   LF + ++   +  VV      
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    P+ V YT +I GLC++G + +A  +  Q+  + + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P +VTY+S+I GFC   +      L+ +M+  G  P+VV + V++D L K G M  A + 
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M+   +R N  V+N+L+DG+C   R + A ++F  M   G K +V +++ ++     
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E AL L+  M   G++P  + Y TL     +  +     +LFD MQR+ ++AD   
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
               I  L K   I +A + F  L   K E DI +Y+ +I G C   RL  A  +F  L 
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
                 + VT  I+IH LC +  MD A  +F  M  KG  P+ V +  LM    ++ +  
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723

Query: 393 KVVELLHRMDER 404
              +L   M E+
Sbjct: 724 GSFKLFEEMQEK 735



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 201/400 (50%), Gaps = 9/400 (2%)

Query: 7   FTKLKAFGCEPN-VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           F KL   G EP+ V  +  +++ L   G    AL+    ++      G+V          
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS------CNK 257

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GL  +  ++ A  LL  + D    P+VVT+ ++I GFC   + + A  LF  M  +G
Sbjct: 258 VLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+++ +S ++D   K G +    +L    +  GV+ +  V+++ +D +  +G +  A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            ++  M   G   NV +Y+ILI G C++  I  A  +Y ++L +G++P++VTY++L  G 
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +   F L+++M + G   D   Y   +DGL K G ++ A+     +      L++
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             ++ LIDG C+  R   A ++F  +    +  DV T+  ++     +G++++A  LF  
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M   G+ PD +A+ TL+    ++ + +  ++L   M +RN
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRN 595



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 45/424 (10%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNG-EFGVVCKP-----DAVIYTTIIDGLCKEG 74
           ++ T+ + L R G   VA  +F+EMI   G +F V+        DA +   +++  C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 75  FVDKAKELLL---------------QMKDKNINPDVVT-----YNSVIRG---------- 104
            VDKA E+ +               +M +  I  D V      ++ + RG          
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 105 -------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
                  FC   +  +A      +M++G +  +V+ + ++  L  + ++E AS+LL L++
Sbjct: 221 GFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVL 278

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN   + TL++GFC  G ++RA +LF  ME  G + ++ +YS LI+GY K   + 
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
               L+S+ L KG+K  VV +++      +   +  A  ++  M   G++ +   Y   I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            GLC++G I EA  ++  +     E  I +YS LIDG CK G L+  + L+  + +    
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVV Y +++  L   G M  A    + M  + +  + V FN+L+ G  R N   + +++
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518

Query: 398 LHRM 401
              M
Sbjct: 519 FRLM 522



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 6/170 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  LK     PN +T + LI+ LC+      A+ +F  M           KP+AV
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS------KPNAV 707

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D   K   ++ + +L  +M++K I+P +V+Y+ +I G C     +EA  +F + 
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +D  + P+VV +++++   CK G++ EA+ L E M++ GV+P+  +   L
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 56/326 (17%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI----------- 157
           ++ N A + F      G  P   +F  I   L +NG  + A ++ + MI           
Sbjct: 81  SEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLG 137

Query: 158 QIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--------------------- 195
            I  R  +A V   LM+  C  G V++A E+FV    +G                     
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197

Query: 196 ----------CKHNVFSYSILING------YCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
                     C+  +    +  +G      +CK  E+  AL  +  ++ +G +  +V+ N
Sbjct: 198 DLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRVGIVSCN 256

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  GL  + Q+E A +L   +   G A +   + T I+G CK G +  A +LF+ +   
Sbjct: 257 KVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             E D+ +YS LIDG  K+G L +  +LF  +L +GV + DVV ++  I      G +  
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL-DVVVFSSTIDVYVKSGDLAT 374

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG 384
           A  ++  M  +G++P+ V +  L+ G
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKG 400


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 199/387 (51%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN +TY+T+I G C  G    AL++  EM    G       P+   Y T+I G CK G V
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 566

Query: 77  DKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           D+A ++  +M  K  + P+ V YN++I G+C     + A      M+++GV   V T+++
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  L  +G+  EA +L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+P +V YN L         ++RAF
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+ +Y+ LI G 
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
              G +K A  + + +        ++TYN +I  LC +G+ D A ++  +M   G+ PD 
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMD 402
             + +L+ G    +E +   E L   D
Sbjct: 867 STYISLIEGLTTEDERAIDDERLAAAD 893



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 12/387 (3%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
             T++ ++  LC  G    AL L  +M           +P+AV Y T+I G C  G V  
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQM----------PRPNAVTYNTVIAGFCSRGRVQA 532

Query: 79  AKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVI 136
           A +++ +M+++  I P+  TY +VI G+C     +EA ++F EM+ +G V+P  V ++ +
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   C  GK++ A    + M++ GV      YN L+    + GR   A EL   M   G 
Sbjct: 593 IGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 652

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +VF+Y+ILING+CK   ++ AL ++  M  +G++ TVVTY  L   L +  QV+   K
Sbjct: 653 APDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDK 712

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LFDE  R G+  D   Y   I+    +G I  A E+   +   +   D  +Y+ L+ GLC
Sbjct: 713 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLC 772

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
             GR+  A +L   +    +  D+VTYN +I      G +  A  +  +M  KG  P  +
Sbjct: 773 LLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
            +N L+ G  +N +      ++  M E
Sbjct: 833 TYNALIQGLCKNGQGDDAENMVKEMVE 859



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 166/312 (53%), Gaps = 6/312 (1%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C A     A    +E++ Q  +PN VT++ ++   C  G+++ A  ++ 
Sbjct: 483 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+  TV TYN L   LF   +   A++L +EM   G+A D + 
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G + +ALE+F  +        + +Y+ LI  L K G+++   +LF    
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R  +  D+V YN +I++    G +D+A ++  +ME K +APD V +NTLM G        
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 393 KVVELLHRMDER 404
           +  +L+  M ER
Sbjct: 779 EARKLIDEMTER 790



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V TY+ LING C+ G+   AL +FE M       GV  +   V
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM----SRRGV--RATVV 692

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  L K+G V +  +L  +   + I PD+V YN++I     + + + A  +  EM
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M  LC  G+++EA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI P   TY +L
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872

Query: 242 FIGL 245
             GL
Sbjct: 873 IEGL 876


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           EP+V+TY+TL+ GLC+ G    A +LF  M  G G       P  V YTT+ID  CK   
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSM-EGAG-----ITPSDVTYTTLIDVFCKMCQ 151

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            + A  LL  M  +  +P V +Y S+I G C     ++A +LF EM   G +P+ VT++ 
Sbjct: 152 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 211

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   ++ EA  LL +M++ G +P+   +  L++G C T R+  A  LF  M   G
Sbjct: 212 LIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 271

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  ++ ++++L++  C  +++  ALS+            V+ Y  +F  L      +RA 
Sbjct: 272 CAPDLVTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAA 329

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  +M R GV  +   Y  F  GL      + A   FR +     E D+ +Y+ L+DG 
Sbjct: 330 RLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 389

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK+ RL +A ++   + +  L  ++VTYN ++   C  GK++   +L   M ++G  PD 
Sbjct: 390 CKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 449

Query: 376 VAFNTLMLG 384
             ++TL+ G
Sbjct: 450 ATWSTLVAG 458



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F   CKP+A+ Y  ++  LC+ G +DKA   + +M  + + PDV TYN VI   C A   
Sbjct: 27  FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 86

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A    IE  +   +P+VVT++ ++  LCKNG++ +A  L   M   G+ P+   Y TL
Sbjct: 87  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D FC   +   A  L   M S  C   V+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           KP  VTYNTL  GL    ++  A  L   M  +G   D   +   I+GLC    I EA  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF+ +    C  D+ +++ L+  LC   +L+ A  +  + P       V+ Y  +   L 
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 320

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
                D+A  L   M  +GV P+ V +     G     E  +      RM E+
Sbjct: 321 RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 373



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 197/432 (45%), Gaps = 43/432 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +F ++ +  C+PN ++Y  L+  LCRTG    A +   EM            PD   Y  
Sbjct: 22  VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK------LVPDVFTYNV 75

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LCK   + +A E    M +    PDVVTYN+++ G C      +A  LF  M   G
Sbjct: 76  VIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAG 131

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+ VT++ ++D  CK  + E A  LL+LM      P  + Y ++++G C   +V++A 
Sbjct: 132 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF  M+  GCK +  +Y+ LI+G C  + +  A  L + M+  G +P  +T+  L  GL
Sbjct: 192 QLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGL 251

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE-------------- 291
               +++ AF LF  M + G A D   +   +  LC    +  AL               
Sbjct: 252 CTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVIL 311

Query: 292 ---LFRTL----------RILK------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
              +FR L          R+L+         ++ +Y+    GL        A+  F  + 
Sbjct: 312 YTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRML 371

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  D+V YN+++   C   ++D A  +   M+  G+ P+ V +NTL+    R  +  
Sbjct: 372 EQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVE 431

Query: 393 KVVELLHRMDER 404
            + ELLH M  R
Sbjct: 432 AIGELLHTMVSR 443



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 4/287 (1%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VT N+++     A  S +   +F  +  Q  +PN +++  ++  LC+ GK+++A   +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M +  + P+ F YN ++D  C   R++RA E F +M     + +V +Y+ L+ G CKN  
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A SL+  M   GI P+ VTY TL     ++ Q E A+ L   M     +   ++Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+GLCKN  + +A +LF  +++  C+ D  +Y+ LI GLC   RL  A +L   +    
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              D +T+  +I  LC   ++ +A  LF  M  +G APD V    L+
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLV 283



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 39/297 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  GC+P+ +TY+TLI+GLC       A +L   M+  NG      +PD +
Sbjct: 189 QAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE-NG-----FQPDKI 242

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN----------------SVIRGF 105
            +T +I+GLC    + +A  L   M  +   PD+VT+                 SV+R +
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY 302

Query: 106 CYANDS-----------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
               ++                 + A RL  +M  +GV PNVVT++     L    +   
Sbjct: 303 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMR 362

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A +    M++ G+ P+   YN L+DGFC   R++ A+++   M+  G   N+ +Y+ L+ 
Sbjct: 363 AYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVG 422

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            +C+  ++E    L   M+S+G +P V T++TL  GLF + Q + A+   +     G
Sbjct: 423 HHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 6/125 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A   F ++   G EP+++ Y+ L++G C+       L++ E+M+    + G+   P+ 
Sbjct: 361 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR----LDMAEKMVRYMDQSGL--PPNI 414

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++   C++G V+   ELL  M  +   PDV T+++++ G      ++ A      
Sbjct: 415 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNL 474

Query: 121 MMDQG 125
            M QG
Sbjct: 475 AMSQG 479


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 200/369 (54%), Gaps = 6/369 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN    + L++GLC+ G    A+ L+  ++    E G     + V    +I GLC+ G 
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELWYRLL----EKGFAA--NTVTSNALIHGLCEAGS 457

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
            ++A +LL +M ++ +  D ++YN++I   C      E  +L  EM+ +G+QP++ T+++
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNM 517

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC  GK+EEA  L     + G  P+A+ Y  ++DG+C   RV   ++LF  M +M 
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + N   Y  LI  YC+N  +  A  L  +M S+GI  T  TY++L  GL  I  V+ A 
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L DEM++ G++ +   Y   I G CK G + +   + + + I     +  +Y+ +I+G 
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G +K A +L + + +  ++ D VTYN + +  C +GKM++A  +   M   G++ D 
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 376 VAFNTLMLG 384
           + + TL+ G
Sbjct: 758 ITYTTLIDG 766



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 196/400 (49%), Gaps = 29/400 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMING-----NGEFGVVC------------ 56
           G  PN +T ++LI G C++     A +L EEM+ G      G F  V             
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391

Query: 57  ------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                       KP+  + T ++ GLC+ G   +A EL  ++ +K    + VT N++I G
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
            C A    EA +L  EM+++G+  + ++++ ++   CK GK+EE  +L E M++ G++P+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + YN L+ G C  G++  A  L+   +  G   + ++Y I+I+GYCK   +E    L+ 
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM++  I+   V Y TL     E   +  AF+L D+M+  G+   +  Y + I GL   G
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            +  A +L   +R      ++  Y+ LI G CK G++     +   +    +  + +TY 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           IMI+  C  G M  A  L  +M  KG+ PD V +N L  G
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 213/468 (45%), Gaps = 64/468 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF K++  G  PNV+TY+ +I+GLC+ G    A    E+M               I
Sbjct: 215 DAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLI 274

Query: 47  NG------NGEFGVVCK--------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG        E   + K        P+ V+Y T+IDG C+ G +  A ++   M    I+
Sbjct: 275 NGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS 334

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG--------------------------- 125
           P+ VT NS+I+G+C +N    A+ L  EM+  G                           
Sbjct: 335 PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLF 394

Query: 126 --------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
                    +PN    ++++  LC+NGK  EA +L   +++ G   N    N L+ G C 
Sbjct: 395 IMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCE 454

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A +L   M   G   +  SY+ LI   CK  ++E    L  EM+ +GI+P + T
Sbjct: 455 AGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYT 514

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  GL  + ++E A  L+ E +++G   D + Y   IDG CK   + E  +LF+ + 
Sbjct: 515 YNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV 574

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +K E +   Y  LI   C++G ++ A+ L   +    +     TY+ +IH L   G +D
Sbjct: 575 TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD 634

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            A+ L  +M  +G++P+ V +  L+ G  +  +  KV  +L  M   N
Sbjct: 635 SANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 195/388 (50%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+V  +ST++N  C  G    A+ LF +M     + GV   P+ V Y  II GLCK 
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM----EKVGVA--PNVVTYNNIIHGLCKN 245

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+A +   +M+ + + P +VTY  +I G       +EA  +  EM D+G  PN V +
Sbjct: 246 GRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVY 305

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C+ G +  A Q+ + MI  G+ PN+   N+L+ G+C + ++  A+ L   M +
Sbjct: 306 NTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C     + AL    EML +  KP       L  GL +  +   
Sbjct: 366 GGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L+  +   G AA+T      I GLC+ G   EA +L + +      LD  SY+ LI 
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK G+++  ++L   + R  +  D+ TYN+++H LC  GK+++A  L+ + +  G  P
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP 545

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   +  ++ G  + N   +  +L   M
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEM 573



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 161/314 (51%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + PDV  +++++  FC     ++A  LF +M   GV PNVVT++ I+  LCKNG+++EA 
Sbjct: 193 VTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAF 252

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           Q  E M +  V+P+   Y  L++G     R + A  +   M   G   N   Y+ LI+GY
Sbjct: 253 QFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+   I  AL +  +M+S GI P  VT N+L  G  + +Q+E A  L +EM   G   + 
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQ 372

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             + + I  LC       AL     + +   + +    + L+ GLC++G+   A EL++ 
Sbjct: 373 GTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L      A+ VT N +IH LC  G  ++A  L  +M  +G+  D +++NTL+L C +  +
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGK 492

Query: 391 TSKVVELLHRMDER 404
             +  +L   M  R
Sbjct: 493 VEEGFKLKEEMVRR 506



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF ++     E N + Y TLI   C  G+   A  L ++M +            + 
Sbjct: 565 EGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG------IPQTSA 618

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I GL   G VD A +LL +M+ + ++P+VV Y ++I G+C     ++   +  EM
Sbjct: 619 TYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEM 678

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V PN +T++++++  CK G M+ A++LL  M Q G+ P+A  YN L +GFC  G++
Sbjct: 679 SINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM 738

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCK 212
             A ++   M + G   +  +Y+ LI+G+ K
Sbjct: 739 EEALKVCDLMSTGGISLDDITYTTLIDGWHK 769


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 203/405 (50%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  AL   +  +G   +  T + ++  LC  G        F  M+    E G    P+ V
Sbjct: 91  EVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML----ETGT--PPNVV 144

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  IDGLCK  +V +A  +L +M  + + P+V T+ ++I G C    +  A RLF+++
Sbjct: 145 NYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKL 204

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +     +PNV T++V++   C+ GK+  A  LL  M++ G++PN   Y TL+ G C  G 
Sbjct: 205 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 264

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +RA EL   M+  G   N+++Y+ +I+G+CK  +I+ A  +     S+G+K   +TY  
Sbjct: 265 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 324

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +   +  A  LFD M  +G   D  AY + I   C+   + E+ + F    ++ 
Sbjct: 325 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 384

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                ++Y+ +I G CK GR  +A  +F  + +    AD +TY  +I  LC + ++++A 
Sbjct: 385 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 444

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L+  M  K + P  V   TL     R  +TS  V +L R+D+R 
Sbjct: 445 ALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 489



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 9/308 (2%)

Query: 99  NSVIRG----FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + V+RG    F  A    EA  + +EM   G+   V T + ++    + G    A ++ +
Sbjct: 3   HEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFD 62

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M + GV P    +  L+   C  G+V     L  +M   G   +  + ++++   C+  
Sbjct: 63  GMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKG 122

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             +     +  ML  G  P VV Y     GL +   V++AF + +EM   G+  + + + 
Sbjct: 123 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 182

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKC---ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           T IDGLCK G+   A  LF  L+++K    + ++ +Y+ +I G C+ G+L  A  L   +
Sbjct: 183 TLIDGLCKIGWTERAFRLF--LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 240

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L  +  TY  +I   C  G  D+A +L   M+ +G  P+   +N ++ G  +  + 
Sbjct: 241 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 300

Query: 392 SKVVELLH 399
            +  ++L 
Sbjct: 301 QEAYKVLR 308


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 221/438 (50%), Gaps = 54/438 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A++ ++      P+V+TY  LI+GLC+T  T  AL LF+EM +     G++  P+ +I
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR----GIL--PNQII 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC---YANDS-------- 111
           Y+ ++ GLC+   +  A+ L  +M+    N D++TYN ++ GFC   Y +D+        
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 112 ------------------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                                    EA   + +M+ + ++P+V+ +++++  L + G++ 
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  LL  M + G+RP+   YN L+ GFC  G ++ A+ L + +    C  N  +YSILI
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILI 415

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM------ 261
            G CKN  I  A  ++ EM   G  P+VVT+N+L  GL + +++E A  LF +M      
Sbjct: 416 CGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP 475

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                  Q      D  + +  ++ LC++G I++A +L   L       DIR+Y+ LI+G
Sbjct: 476 SLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILING 535

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK G +  A++LF  +     + D VTY  +I  L   G+ + A ++F  M  KG  P+
Sbjct: 536 FCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPE 595

Query: 375 CVAFNTLMLGCIRNNETS 392
              + T+M    R N  S
Sbjct: 596 SSTYKTIMTWSCRENNIS 613



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 42/369 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF+K++A GC  ++ITY+ L+NG C++G+   A  L + +       GV+      
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI 310

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   KPD ++YT +I GL +EG V +A  LL +M ++ + 
Sbjct: 311 NGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLR 370

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD + YN++I+GFC     +EA+ L +E+      PN  T+S+++  +CKNG + +A  +
Sbjct: 371 PDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-----------SMGCKH--N 199
            + M ++G  P+   +N+L++G C   R+  A+ LF  ME           S G     +
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD 490

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           + S  +++   C++  I  A  L  +++  G+ P + TYN L  G  +   +  AFKLF 
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EMQ  G   D+  Y T IDGL + G   +ALE+F  +    C  +  +Y  ++   C+  
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 320 RLKIAWELF 328
            + +A  ++
Sbjct: 611 NISLALSVW 619



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
            +S LI      G    A+  F  M + +      CKPD   +  I+  L ++     A 
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFD------CKPDLFAFNLILHFLVRKEAFLLAL 183

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            +  QM   N+NPDVVTY  +I G C    + +A  LF EM D+G+ PN + +S+++  L
Sbjct: 184 AVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+  K+ +A +L   M   G   +   YN L++GFC +G ++ A  L   +   G    V
Sbjct: 244 CQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGV 303

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
             Y  LING  + +  E A   Y +ML + IKP V+ Y  +  GL +  +V  A  L  E
Sbjct: 304 IGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGE 363

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M   G+  DT  Y   I G C  GY+ EA  L   +    C  +  +YS LI G+CK+G 
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           +  A  +F  + +   +  VVT+N +I+ LC   ++++A  LF  ME
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 168/340 (49%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++ +I+   + G  +KA E    M+D +  PD+  +N ++           A  ++ +M+
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + P+VVT+ +++  LCK  K ++A  L + M   G+ PN  +Y+ ++ G C   ++ 
Sbjct: 191 KCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIF 250

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ LF  M + GC  ++ +Y++L+NG+CK+  ++ A +L   +   G    V+ Y  L 
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI 310

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GLF   + E A   + +M R  +  D   Y   I GL + G + EAL L   +      
Sbjct: 311 NGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLR 370

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   Y+ LI G C  G L  A  L   + +     +  TY+I+I  +C +G ++KA  +
Sbjct: 371 PDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           F +ME  G  P  V FN+L+ G  + N   +   L ++M+
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 145/295 (49%)

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           D+    RLFI  +            +I+ +L K    E   ++L+ +    ++ ++  ++
Sbjct: 73  DTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFS 132

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++ +   G   +A E F  M    CK ++F+++++++   + +    AL++Y++ML  
Sbjct: 133 VLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + P VVTY  L  GL +  + + A  LFDEM   G+  +   Y   + GLC+   I +A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
             LF  +R   C  D+ +Y+ L++G CKSG L  A+ L   L +   I  V+ Y  +I+ 
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L    + ++AH  +  M  + + PD + +  ++ G  +    ++ + LL  M ER
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 177/389 (45%), Gaps = 67/389 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP--- 58
           +A  +F +++  GC P+V+T+++LINGLC+      A  LF +M        +V KP   
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-------EIVRKPSLF 478

Query: 59  -----------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                      D      +++ LC+ G + KA +LL+Q+ D  + PD+ TYN +I GFC 
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
             + N A +LF EM  +G  P+ VT+  ++D L + G+ E+A ++ E M++ G  P +  
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y T+M                             ++S      C+   I  ALS++ + L
Sbjct: 599 YKTIM-----------------------------TWS------CRENNISLALSVWMKYL 623

Query: 228 S--KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
              +G +   V    +    F+  +++ A +   EM       D   Y  F+ GL +   
Sbjct: 624 RDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKR 680

Query: 286 IVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELF-HSLPRGVLIADVVT 342
             EA  +F  L+  K  ++I S SC  LI  LC    L +A ++F  +L RG  +   + 
Sbjct: 681 DCEAFAIFSVLKDFK--MNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPIC 738

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGV 371
             ++ + L  D K D A  L   MEA G 
Sbjct: 739 NQLLCNLLHLDRK-DDALFLANRMEASGT 766



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 23/274 (8%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L  +L   G  P++ TY+ LING C+ G+   A  LF+EM + G+        PD
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH-------MPD 560

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +V Y T+IDGL + G  + A E+  QM  K   P+  TY +++   C  N+ + A  +++
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 120 EMMD--QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF---VYNTLMDG 174
           + +   +G +   V    ++ E   N   EE    +  ++++ ++   F    Y   + G
Sbjct: 621 KYLRDFRGWEDEKVR---VVAESFDN---EELQTAIRRLLEMDIKSKNFDLAPYTIFLIG 674

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYS--ILINGYCKNKEIEGALSLYSEMLSKGIK 232
                R   A  +F  ++    K N+ S S  +LI   C  + ++ A+ ++   L +G +
Sbjct: 675 LVQAKRDCEAFAIFSVLKDF--KMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFR 732

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                 N L   L  + + + A  L + M+  G 
Sbjct: 733 LMPPICNQLLCNLLHLDRKDDALFLANRMEASGT 766


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 202/425 (47%), Gaps = 45/425 (10%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A G    V+ Y  L +G CR G    A  +           G+  +P+A  Y  +I  LC
Sbjct: 128 ACGPAATVVAYGALTDGYCRAGRLGDARRVV---------GGMPVQPNAYTYNPLIHTLC 178

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           + G V  A  +L  M  +   PDVVTYN ++   C      +A  L   M  +G  PN V
Sbjct: 179 ERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNV 238

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T++V+MD +C  G +++A +LL  +   G +P+   YNT++ G C   R   A EL   M
Sbjct: 239 TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 298

Query: 192 --------------------------------ESM---GCKHNVFSYSILINGYCKNKEI 216
                                           E M   GC  N+ +Y+ +ING C+ + +
Sbjct: 299 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 358

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +GA+ L S+M S G KP +VTYNTL  GL    Q   A +L D M ++G   D   + T 
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I  LC+ G +V+A+E+F+ +    C  +  +YS +I GL K+ +L  A ELF+ +     
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 478

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D + Y ++   L  D  +++A      ++  G++P  V +N ++LG  RN +T   ++
Sbjct: 479 NPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537

Query: 397 LLHRM 401
           ++  M
Sbjct: 538 IMAYM 542



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 209/424 (49%), Gaps = 40/424 (9%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +PN  TY+ LI+ LC  G    AL++ ++M+         C PD V Y  +++  CK   
Sbjct: 164 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRG------CAPDVVTYNILLEATCKGRG 217

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
             +A EL+  M+ +   P+ VTYN ++ G C   D ++A  L   +   G +P+ V ++ 
Sbjct: 218 YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 277

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC   +  +A +L+  M++    PN   +N ++   C  G + +A +L   M   G
Sbjct: 278 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 337

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N+ +Y+ +ING C+ + ++GA+ L S+M S G KP +VTYNTL  GL    Q   A 
Sbjct: 338 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAE 397

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L D M ++G   D   + T I  LC+ G +V+A+E+F+ +    C  +  +YS +I GL
Sbjct: 398 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457

Query: 316 CKSGRLKIAWELFHSL------PRGV--LIAD--------------------------VV 341
            K+ +L  A ELF+ +      P  +  L+A+                           V
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 517

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            YN ++  LC +GK + A D+   M + G  PD + +  L+ G       ++  ELL ++
Sbjct: 518 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577

Query: 402 DERN 405
             R+
Sbjct: 578 CSRD 581



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 12/389 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+    + L+  LCR G    A    E ++   G    V     V Y  + DG C+ G 
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDA----ERVVGACGPAATV-----VAYGALTDGYCRAGR 150

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +  A+ ++  M    + P+  TYN +I   C      +A  +  +M+ +G  P+VVT+++
Sbjct: 151 LGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNI 207

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  CK     +A +L++LM   G  PN   YN LMDG C  G V+ A EL  ++ S G
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           CK +  +Y+ ++ G C  +    A  L +EML +   P   T+N +   L     +++A 
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L ++M +HG  A+   Y   I+GLC+   +  A+ L   ++   C+ DI +Y+ L+ GL
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C + +   A EL  ++ +   + D VT+N +I  LC  G M  A ++F  M  KG  P+ 
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + ++T++ G  +  +  + +EL + M  +
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHK 476



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 42/405 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++   +   GC P+V+TY+ L+   C+      A+ L + ++   G     C P+ V
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID-LMRAEG-----CTPNNV 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++DG+C EG VD A ELL  +      P  V YN+V++G C A    +A  L  EM
Sbjct: 239 TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  TF+V++  LC+ G +++A QLLE M + G   N   YN +++G C    V
Sbjct: 299 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKE-------------------------- 215
           + A  L   M+S GCK ++ +Y+ L+ G C   +                          
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418

Query: 216 ---------IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                    +  A+ ++ +M  KG  P  +TY+T+  GL +  ++++A +LF+EM   G 
Sbjct: 419 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 478

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   Y+   + L  +  I EA++  R L+          Y+ ++ GLC++G+ + A +
Sbjct: 479 NPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +   +     + D +TY I+I  L  +G +++A +L + + ++ V
Sbjct: 538 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 175/347 (50%), Gaps = 8/347 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   L + GC+P+ + Y+T++ GLC       A  L  EM+  N      C P+  
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN------CPPNEA 308

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  LC++G + +A +LL +M       ++VTYN++I G C   + + A  L  +M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT++ ++  LC   +  +A +L++ M Q G  P+   +NTL+   C  G +
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M   GC  N  +YS +I+G  K  +++ AL L++EM  KG  P  + Y  L
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLL 487

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   +E A +   ++Q  G++  T  Y   + GLC+NG    A+++   +    C
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 547

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMI 347
             D  +Y  LI+GL   G L  A EL   L  R VL+  ++    ++
Sbjct: 548 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALL 594



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 44/269 (16%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L   G ++ A +L+E   +    P+A + N L+   C  GR + A+ +   + + G 
Sbjct: 78  LSALVHRGDLDAALRLVESSPR---PPDAALANRLVRDLCRRGRPDDAERV---VGACGP 131

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              V +Y  L +GYC+   +  A  +   M    ++P   TYN L               
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPL--------------- 173

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
                               I  LC+ G + +AL +   +    C  D+ +Y+ L++  C
Sbjct: 174 --------------------IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATC 213

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K    + A EL   +       + VTYN+++  +C +G +D A +L  ++ + G  P  V
Sbjct: 214 KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +NT++ G           EL+  M   N
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLREN 302


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 212/466 (45%), Gaps = 78/466 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   LK  G   + ++++TL+ G CR G    A  + E     +G   VV      
Sbjct: 137 DAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERVLEAA-RASGAANVV------ 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +IDG C+ G +  A  L+  M    + PD  TYN+V++G C+A    EA+ L  EM
Sbjct: 189 TYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELMREM 245

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------ 175
           +     PN VTF+  +   C+NG ++ A +LLE M + G  P+  +Y+TL++GF      
Sbjct: 246 IRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRV 305

Query: 176 --------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                                     C+ GR +   EL   M    C  N  ++S LIN 
Sbjct: 306 DDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINS 365

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-------- 261
            C+N+  E A+ +  +M   G  P VV+YNT+     E    + A KL + M        
Sbjct: 366 LCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTIS 425

Query: 262 -----------QRHGVAADTWA-------------YRTFIDGLCKNGYIVEALELFRTLR 297
                      +R   AA+  A             +   ID LC+NG + +A+E+F  + 
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +C  DI +YS LI+G  + G  K+A++LF S+P     AD+ +YN  +  LC   + D
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWD 542

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A +L  DM  K   P+ V FN L+    +    ++ +E+  +M +
Sbjct: 543 DAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPK 588



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 205/431 (47%), Gaps = 76/431 (17%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           NV+TY+ LI+G CR+G    AL L   M            PD   Y T++ GLC     +
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASM---------PVAPDTYTYNTVLKGLCFAKQWE 236

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A+EL+ +M   N +P+ VT+ + IR FC     + A  L  +M   G  P+VV +S ++
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLV 296

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           +   ++G++++A +LL  M+    RPN   YN  + G C+ GR +   EL   M    C 
Sbjct: 297 NGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCP 353

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N  ++S LIN  C+N+  E A+ +  +M   G  P VV+YNT+     E    + A KL
Sbjct: 354 PNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKL 413

Query: 258 FDEM-------------------QRHGVAADTWA-------------YRTFIDGLCKNGY 285
            + M                   +R   AA+  A             +   ID LC+NG 
Sbjct: 414 LNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQ 473

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP------------- 332
           + +A+E+F  +   +C  DI +YS LI+G  + G  K+A++LF S+P             
Sbjct: 474 VKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLK 533

Query: 333 ----------RGVLIADVVT---------YNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
                      G LIAD+VT         +NI+I++LC  G +++A +++  M   G+ P
Sbjct: 534 GLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITP 593

Query: 374 DCVAFNTLMLG 384
           D   +N L+ G
Sbjct: 594 DIFTYNALING 604



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 203/436 (46%), Gaps = 47/436 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++    C PN +T++T I   C+ G    A+ L E+M     ++G  C PD V
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQM----PKYG--CMPDVV 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+++G  + G VD A +LL  M  +   P+ V YN+ ++G C A   +E   L  EM
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------ 175
           + +   PN  TFS +++ LC+N   E A ++LE M + G  P+   YNT++  F      
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 176 --------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                                     C   R   A EL   M    C  N  +++ILI+ 
Sbjct: 408 DDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDS 467

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C+N +++ A+ ++  M      P +VTY++L  G  E    + AF LF  M      AD
Sbjct: 468 LCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRAD 524

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
            ++Y   + GLC      +A EL   +    C  +  +++ LI+ LC+ G +  A E++ 
Sbjct: 525 IFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYE 584

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +P+  +  D+ TYN +I+     G +D A      M  +   PD +++N+++ G  R  
Sbjct: 585 QMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCRAE 641

Query: 390 ETSKVVELLHRMDERN 405
                 +L+  M  +N
Sbjct: 642 RWKDAEKLVTEMLRKN 657



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 184/342 (53%), Gaps = 15/342 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L  ++    C PN  T+STLIN LC+      A+ + E+M     ++G +  PD V
Sbjct: 339 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM----QKYGYM--PDVV 392

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TII    ++   D A +LL  M  K   PD +++N+V++  C A    +A  L  +M
Sbjct: 393 SYNTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKM 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +    N +TF++++D LC+NG++++A ++ ELM +    P+   Y++L++GF   G  
Sbjct: 450 LKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLD 509

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF    SM C+ ++FSY+  + G C     + A  L ++M++K   P  VT+N L
Sbjct: 510 KVAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNIL 566

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   V RA +++++M ++G+  D + Y   I+G  + G + +AL+   T   + C
Sbjct: 567 INSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLST---MPC 623

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           E D  SY+ ++ GLC++ R K A +L   + R     + VT+
Sbjct: 624 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 8/276 (2%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P V+T ++++ +LC   ++ +A ++LE +   G   +A  +NTL+ G+C  G +  A+ +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
             +  + G   NV +Y+ LI+GYC++  +  AL L + M    + P   TYNT+  GL  
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             Q E A +L  EM R+    +   + T I   C+NG +  A+EL   +    C  D+  
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           YS L++G  + GR+  A +L  ++   +   + V YN  +  LC  G+ D+  +L  +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            K   P+   F+TL+    +N      +E+L +M +
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQK 384



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 5/130 (3%)

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I  LC    + +A  +   L+      D  S++ L+ G C+ G L  A  +  +  R  
Sbjct: 125 LIKKLCARRRLADAERVLEALKT-SGAADAVSHNTLVAGYCRDGSLWDAERVLEAA-RAS 182

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
             A+VVTY  +I   C  G++  A  L   M    VAPD   +NT++ G     +  +  
Sbjct: 183 GAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAE 239

Query: 396 ELLHRMDERN 405
           EL+  M   N
Sbjct: 240 ELMREMIRNN 249


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 199/387 (51%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN +TY+T+I G C  G    AL++  EM    G       P+   Y T+I G CK G V
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 571

Query: 77  DKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           D+A ++  +M  K  + P+ V YN++I G+C     + A      M+++GV   V T+++
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  L  +G+  EA +L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+P +V YN L         ++RAF
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+ +Y+ LI G 
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
              G +K A  + + +        ++TYN +I  LC +G+ D A ++  +M   G+ PD 
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMD 402
             + +L+ G    +E +   E L   D
Sbjct: 872 STYISLIEGLTTEDERAIDDERLAAAD 898



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 12/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF  +          T++ ++  LC  G    AL L  +M           +P+AV 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------PRPNAVT 521

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           Y T+I G C  G V  A +++ +M+++  I P+  TY +VI G+C     +EA ++F EM
Sbjct: 522 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 581

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +G V+P  V ++ ++   C  GK++ A    + M++ GV      YN L+    + GR
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 641

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++ TVVTY  
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   +   +
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ L+ GLC  GR+  A +L   +    +  D+VTYN +I      G +  A 
Sbjct: 762 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 821

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  +M  KG  P  + +N L+ G  +N +      ++  M E
Sbjct: 822 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 166/312 (53%), Gaps = 6/312 (1%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C A     A    +E++ Q  +PN VT++ ++   C  G+++ A  ++ 
Sbjct: 488 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+  TV TYN L   LF   +   A++L +EM   G+A D + 
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G + +ALE+F  +        + +Y+ LI  L K G+++   +LF    
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R  +  D+V YN +I++    G +D+A ++  +ME K +APD V +NTLM G        
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 393 KVVELLHRMDER 404
           +  +L+  M ER
Sbjct: 784 EARKLIDEMTER 795



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V TY+ LING C+ G+   AL +FE M       GV  +   V
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM----SRRGV--RATVV 697

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I  L K+G V +  +L  +   + I PD+V YN++I     + + + A  +  EM
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M  LC  G+++EA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI P   TY +L
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877

Query: 242 FIGL 245
             GL
Sbjct: 878 IEGL 881


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 169/309 (54%), Gaps = 25/309 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVC---------------- 56
           GC P+V+T++TL+NGLC  G  + AL L + M+  G+  +G +                 
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLL 64

Query: 57  --------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                   K   VIY  IID LCK+G    A+ L  +M DK I PDV+TY+ +I  FC +
Sbjct: 65  SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
               +A++L  +M+++ + P+VVTFS +++ L K GK+ EA ++   M++ G+ P    Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N+++DGFC   R+N AK +  SM S  C  +V ++S LINGYCK K ++  + ++ EM  
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +GI    VTY TL  G  ++  ++ A  L + M   GVA +   +++ +  LC    + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304

Query: 289 ALELFRTLR 297
           A  +   L+
Sbjct: 305 AFAILEDLQ 313



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 160/313 (51%), Gaps = 4/313 (1%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M +    PDVVT+ +++ G C      +A  L   M+++G QP    +  I++ LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            E A  LL  M +  ++ +  +YN ++D  C  G    A+ LF  M   G   +V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+ +C++     A  L  +M+ + I P VVT++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +   T  Y + IDG CK   + +A  +  ++    C  D+ ++S LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           E+F  + R  ++A+ VTY  +IH  C  G +D A DL   M + GVAP+ + F +++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 386 IRNNETSKVVELL 398
               E  K   +L
Sbjct: 297 CSKKELRKAFAIL 309



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 151/261 (57%), Gaps = 6/261 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +K++    + +V+ Y+ +I+ LC+ GH I A NLF EM +  G F     PD + 
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIF-----PDVIT 113

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +ID  C+ G    A++LL  M ++ INPDVVT++++I         +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P  +T++ ++D  CK  ++ +A ++L+ M      P+   ++TL++G+C   RV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E+F  M   G   N  +Y+ LI+G+C+  +++ A  L + M+S G+ P  +T+ ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 243 IGLFEIHQVERAFKLFDEMQR 263
             L    ++ +AF + +++Q+
Sbjct: 294 ASLCSKKELRKAFAILEDLQK 314



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 6/226 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LFT++   G  P+VITYS +I+  CR+G    A  L  +MI           PD 
Sbjct: 93  IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ------INPDV 146

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V ++ +I+ L KEG V +A+E+   M  + I P  +TYNS+I GFC  +  N+AKR+   
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P+VVTFS +++  CK  +++   ++   M + G+  N   Y TL+ GFC  G 
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           ++ A++L   M S G   N  ++  ++   C  KE+  A ++  ++
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 4/249 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G RP+   + TLM+G C  GRV +A  L   M   G +     Y  +ING CK  +
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E AL+L S+M    IK  VV YN +   L +      A  LF EM   G+  D   Y  
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID  C++G   +A +L R +   +   D+ ++S LI+ L K G++  A E++  + R  
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +    +TYN MI   C   +++ A  +   M +K  +PD V F+TL+ G  +       +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 396 ELLHRMDER 404
           E+   M  R
Sbjct: 237 EIFCEMHRR 245



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC+ +V +++ L+NG C    +  AL+L   M+ +G +P    Y T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            E A  L  +M+   + A    Y   ID LCK+G+ + A  LF  +       D+ +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +ID  C+SGR   A +L   +    +  DVVT++ +I+AL  +GK+ +A +++ DM  +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + P  + +N+++ G  + +  +    +L  M  ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 169/309 (54%), Gaps = 25/309 (8%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVC---------------- 56
           GC P+V+T++TL+NGLC  G  + AL L + M+  G+  +G +                 
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLL 64

Query: 57  --------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                   K   VIY  IID LCK+G    A+ L  +M DK I PDV+TY+ +I  FC +
Sbjct: 65  SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
               +A++L  +M+++ + P+VVTFS +++ L K GK+ EA ++   M++ G+ P    Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N+++DGFC   R+N AK +  SM S  C  +V ++S LINGYCK K ++  + ++ EM  
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +GI    VTY TL  G  ++  ++ A  L + M   GVA +   +++ +  LC    + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304

Query: 289 ALELFRTLR 297
           A  +   L+
Sbjct: 305 AFAILEDLQ 313



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 4/318 (1%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M +    PDVVT+ +++ G C      +A  L   M+++G QP    +  I++ LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            E A  LL  M +  ++ +  +YN ++D  C  G    A+ LF  M   G   +V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+ +C++     A  L  +M+ + I P VVT++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +   T  Y + IDG CK   + +A  +  ++    C  D+ ++S LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           E+F  + R  ++A+ VTY  +IH  C  G +D A DL   M + GVAP+ + F +++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 386 IRNNETSKVVELLHRMDE 403
               E  K   +L  + +
Sbjct: 297 CSKKELRKAFAILEDLQK 314



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 166/321 (51%), Gaps = 4/321 (1%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+PD V +TT+++GLC EG V +A  L+ +M ++   P    Y ++I G C   D+  A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M +  ++ +VV ++ I+D LCK+G    A  L   M   G+ P+   Y+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +GR   A++L   M       +V ++S LIN   K  ++  A  +Y +ML +GI PT 
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           +TYN++  G  +  ++  A ++ D M     + D   + T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +  +Y+ LI G C+ G L  A +L + +    +  + +T+  M+ +LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 356 MDKAHDLFLDMEAKGVAPDCV 376
           + KA  +  D++   V P  V
Sbjct: 302 LRKAFAILEDLQKSEVCPRIV 322



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 152/264 (57%), Gaps = 6/264 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +K++    + +V+ Y+ +I+ LC+ GH I A NLF EM +  G F     PD + 
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIF-----PDVIT 113

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +ID  C+ G    A++LL  M ++ INPDVVT++++I         +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P  +T++ ++D  CK  ++ +A ++L+ M      P+   ++TL++G+C   RV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E+F  M   G   N  +Y+ LI+G+C+  +++ A  L + M+S G+ P  +T+ ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV 266
             L    ++ +AF + +++Q+  V
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEV 317



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 6/236 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LFT++   G  P+VITYS +I+  CR+G    A  L  +MI           PD 
Sbjct: 93  IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ------INPDV 146

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V ++ +I+ L KEG V +A+E+   M  + I P  +TYNS+I GFC  +  N+AKR+   
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P+VVTFS +++  CK  +++   ++   M + G+  N   Y TL+ GFC  G 
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           ++ A++L   M S G   N  ++  ++   C  KE+  A ++  ++    + P +V
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 4/249 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G RP+   + TLM+G C  GRV +A  L   M   G +     Y  +ING CK  +
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E AL+L S+M    IK  VV YN +   L +      A  LF EM   G+  D   Y  
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ID  C++G   +A +L R +   +   D+ ++S LI+ L K G++  A E++  + R  
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +    +TYN MI   C   +++ A  +   M +K  +PD V F+TL+ G  +       +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 396 ELLHRMDER 404
           E+   M  R
Sbjct: 237 EIFCEMHRR 245



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC+ +V +++ L+NG C    +  AL+L   M+ +G +P    Y T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            E A  L  +M+   + A    Y   ID LCK+G+ + A  LF  +       D+ +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +ID  C+SGR   A +L   +    +  DVVT++ +I+AL  +GK+ +A +++ DM  +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + P  + +N+++ G  + +  +    +L  M  ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 221/438 (50%), Gaps = 54/438 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A++ ++      P+V+TY  LI+GLC+T  T  AL LF+EM +     G++  P+ +I
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR----GIL--PNQII 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC---YANDS-------- 111
           Y+ ++ GLC+   +  A+ L  +M+    N D++TYN ++ GFC   Y +D+        
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 112 ------------------------NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                                    EA   + +M+ + ++P+V+ +++++  L + G++ 
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  LL  M + G+RP+   YN L+ GFC  G ++ A+ L + +    C  N  +YSILI
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILI 415

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM------ 261
            G CKN  I  A  ++ EM   G  P+VVT+N+L  GL + +++E A  LF +M      
Sbjct: 416 CGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP 475

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                  Q      D  + +  ++ LC++G I++A +L   L       DIR+Y+ LI+G
Sbjct: 476 SLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILING 535

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK G +  A++LF  +     + D VTY  +I  L   G+ + A ++F  M  KG  P+
Sbjct: 536 FCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPE 595

Query: 375 CVAFNTLMLGCIRNNETS 392
              + T+M    R N  S
Sbjct: 596 SSTYKTIMTWSCRENNIS 613



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 42/369 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF+K++A GC  ++ITY+ L+NG C++G+   A  L + +       GV+      
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI 310

Query: 56  -----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   KPD ++YT +I GL +EG V +A  LL +M ++ + 
Sbjct: 311 NGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLR 370

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD + YN++I+GFC     +EA+ L +E+      PN  T+S+++  +CKNG + +A  +
Sbjct: 371 PDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-----------SMGCKH--N 199
            + M ++G  P+   +N+L++G C   R+  A+ LF  ME           S G     +
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD 490

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           + S  +++   C++  I  A  L  +++  G+ P + TYN L  G  +   +  AFKLF 
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EMQ  G   D+  Y T IDGL + G   +ALE+F  +    C  +  +Y  ++   C+  
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 320 RLKIAWELF 328
            + +A  ++
Sbjct: 611 NISLALSVW 619



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 159/312 (50%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           CKPD   +  I+  L ++     A  +  QM   N+NPDVVTY  +I G C    + +A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM D+G+ PN + +S+++  LC+  K+ +A +L   M   G   +   YN L++GF
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +G ++ A  L   +   G    V  Y  LING  + +  E A   Y +ML + IKP V
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           + Y  +  GL +  +V  A  L  EM   G+  DT  Y   I G C  GY+ EA  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +    C  +  +YS LI G+CK+G +  A  +F  + +   +  VVT+N +I+ LC   +
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 356 MDKAHDLFLDME 367
           +++A  LF  ME
Sbjct: 459 LEEARLLFYQME 470



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 168/340 (49%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++ +I+   + G  +KA E    M+D +  PD+  +N ++           A  ++ +M+
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + P+VVT+ +++  LCK  K ++A  L + M   G+ PN  +Y+ ++ G C   ++ 
Sbjct: 191 KCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIF 250

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ LF  M + GC  ++ +Y++L+NG+CK+  ++ A +L   +   G    V+ Y  L 
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLI 310

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GLF   + E A   + +M R  +  D   Y   I GL + G + EAL L   +      
Sbjct: 311 NGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLR 370

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   Y+ LI G C  G L  A  L   + +     +  TY+I+I  +C +G ++KA  +
Sbjct: 371 PDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           F +ME  G  P  V FN+L+ G  + N   +   L ++M+
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 145/295 (49%)

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           D+    RLFI  +            +I+ +L K    E   ++L+ +    ++ ++  ++
Sbjct: 73  DTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFS 132

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++ +   G   +A E F  M    CK ++F+++++++   + +    AL++Y++ML  
Sbjct: 133 VLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC 192

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + P VVTY  L  GL +  + + A  LFDEM   G+  +   Y   + GLC+   I +A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
             LF  +R   C  D+ +Y+ L++G CKSG L  A+ L   L +   I  V+ Y  +I+ 
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L    + ++AH  +  M  + + PD + +  ++ G  +    ++ + LL  M ER
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 178/390 (45%), Gaps = 71/390 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP--- 58
           +A  +F +++  GC P+V+T+++LINGLC+      A  LF +M        +V KP   
Sbjct: 426 KAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-------EIVRKPSLF 478

Query: 59  -----------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
                      D      +++ LC+ G + KA +LL+Q+ D  + PD+ TYN +I GFC 
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
             + N A +LF EM  +G  P+ VT+  ++D L + G+ E+A ++ E M++ G  P +  
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y T+M                             ++S      C+   I  ALS++ + L
Sbjct: 599 YKTIM-----------------------------TWS------CRENNISLALSVWMKYL 623

Query: 228 S--KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
              +G +   V    +    F+  +++ A +   EM       D   Y  F+ GL +   
Sbjct: 624 RDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKR 680

Query: 286 IVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELF-HSLPRGVLIADVVT 342
             EA  +F  L+  K  ++I S SC  LI  LC    L +A ++F  +L RG  +   + 
Sbjct: 681 DCEAFAIFSVLKDFK--MNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPIC 738

Query: 343 YNIMIHALCADGKMDKAHDLFL--DMEAKG 370
             ++ + L  D K D    LFL   MEA G
Sbjct: 739 NQLLCNLLHLDRKDDA---LFLANRMEASG 765



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 23/273 (8%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L  +L   G  P++ TY+ LING C+ G+   A  LF+EM + G+        PD
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH-------MPD 560

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +V Y T+IDGL + G  + A E+  QM  K   P+  TY +++   C  N+ + A  +++
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 120 EMMD--QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF---VYNTLMDG 174
           + +   +G +   V    ++ E   N   EE    +  ++++ ++   F    Y   + G
Sbjct: 621 KYLRDFRGWEDEKVR---VVAESFDN---EELQTAIRRLLEMDIKSKNFDLAPYTIFLIG 674

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYS--ILINGYCKNKEIEGALSLYSEMLSKGIK 232
                R   A  +F  ++    K N+ S S  +LI   C  + ++ A+ ++   L +G +
Sbjct: 675 LVQAKRDCEAFAIFSVLKDF--KMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFR 732

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                 N L   L  + + + A  L + M+  G
Sbjct: 733 LMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 204/378 (53%), Gaps = 12/378 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  G  PN+ TY+ L++   +  +   AL  + +++    + G+V  P+ V
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDV 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+TT+IDGLC+   + +AK + L M    + P V  YNS+I G   +  + EA   F E+
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+  T S+++  LC  G+M+ A++ LE+M Q G+  NA  YN L+D +C +G +
Sbjct: 340 IRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M  +G + NV +YS LI+G+ KN E+E A+++Y+EM++KG++P VVTY  L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ AF L  EM+  G+ ++       +DGLC+   + +A+         K 
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKK 519

Query: 302 E------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                   +  +Y  LI GL   G+   A   F  +    ++ D  TY ++I  LC  G 
Sbjct: 520 SEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGY 579

Query: 356 MDKAHDLFLDMEAKGVAP 373
           +  A  L+ DM   GV P
Sbjct: 580 VLNAMMLYADMVKVGVKP 597



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 208/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F +L+     P +   + +++GL +         LF+EM+ G G       P  V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEML-GRGMV-----PSVV 174

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+    +G V KA E+  QM  + I+P+VVTY ++I   C  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEM 234

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN+ T++ +M    K   ++ A      +++ G+ PN  ++ TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRI 294

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F+ M        V  Y+ LI+G  ++   + AL+ + E++ KG++P   T + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIV 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q++ A +  + MQ+ G+A +  AY   ID  CK+G + EAL     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ +YS LIDG  K+G ++IA  ++  +    +  +VVTY  +IH    +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +ME KG+  + +  + L+ G  R N     V  +
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI 511



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 165/340 (48%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            I+DGL K   + +  EL  +M  + + P VVTYN++I    +  D  +A  ++ +M+ +
Sbjct: 143 AILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNVVT++ ++  LC+   + +A  L   M + G+RPN + YN LM        +  A
Sbjct: 203 RIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHA 262

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              +  +   G   N   ++ LI+G C+   I  A +++ +M    + PTV  YN+L  G
Sbjct: 263 LVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F     + A   F E+ R G+  D +     + GLC  G +  A      ++     L+
Sbjct: 323 AFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LID  CKSG L  A      +    +  +VVTY+ +I     +G+M+ A  ++ 
Sbjct: 383 AAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYT 442

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M AKGV P+ V +  L+ G  +N +      L   M+E+
Sbjct: 443 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEK 482



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 47/274 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A F ++   G  P+  T S ++ GLC  G   VA    E M     + G+    +A 
Sbjct: 331 EALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVM----QQSGIAL--NAA 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID  CK G +D+A     +M +  + P+VVTY+S+I G     +   A  ++ EM
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           + +GV+PNVVT++ ++    KNG M+ A  L + M + G+  NA   + L+DG C     
Sbjct: 445 VAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRV 504

Query: 177 ------------------------------------LTGRVNRAKELFVSMESMGCKHNV 200
                                               + G+ N A   F  M   G   + 
Sbjct: 505 QDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDR 564

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F+Y+++I G C    +  A+ LY++M+  G+KPT
Sbjct: 565 FTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 129/276 (46%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +   + I+D L K   +    +L + M+  G+ P+   YNTL++     G V +A E+
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M +     NV +Y+ +I   C+   I  A  L+ EM   G++P + TYN L    F+
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              ++ A   + ++ + G+  +   + T IDGLC+   I EA  +F  +   +    +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LI G  +SG  + A   F  + R  L  D  T +I++  LC  G+M  A      M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G+A +  A+N L+    ++    + +    RM E
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 203/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +L+ +G  P+    + +++ L        A+ LF+E+ + N     VC    
Sbjct: 214 LPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AIELFQELPHKN-----VCS--- 261

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LC  G V  A++L  +M      PDVVTY  +I G C   +   A +L  E
Sbjct: 262 --YNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDE 316

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV+PN   ++ ++  LC  G + +A +++E M+Q  V  +  +Y T++ GFC  G 
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+  F  M+  G   +  +Y+ +ING C+  E+E A  L  EM ++ +    VTY  
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  ++  AF++ + M + GV  +   Y    DGLCK G +  A EL   +    
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL+  +Y+ LI+GLCK+G L+ A      +    L  DV TY  +I ALC  G +D+AH
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L  +M  KG+ P  V +N LM G   +       +LL  M E+N
Sbjct: 557 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN 601



 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 202/383 (52%), Gaps = 9/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ +    P+V+TY  LI+G C  G    A+ L +EM+ G  E      P+A 
Sbjct: 277 DARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVE------PNAT 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+++  LC +G++  A  ++  M  + +  D   Y +V+ GFC   D   A+R F EM
Sbjct: 328 VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  + VT++ +++ LC+  ++EEA +LL+ M    +  +   Y  L+DG+C  G++
Sbjct: 388 QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++  +M   G   NV +Y+ L +G CK  +++ A  L  EM +KG++    TYN+L
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +E+A +   +M    +  D + Y T ID LCK+G +  A  L + +     
Sbjct: 508 INGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGI 567

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I +Y+ L++G C SGR++   +L   +    +  +  TYN ++   C +  M    +
Sbjct: 568 KPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTE 627

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M ++ V P+   +N L+ G
Sbjct: 628 IYKGMRSRDVGPNENTYNILIKG 650



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 190/358 (53%), Gaps = 6/358 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+T+++G C  G  + A   F+EM       G+    D V YTT+I+GLC+   +++A++
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLAT--DGVTYTTMINGLCRAVELEEAEK 417

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL +M  + ++ D VTY  +I G+C      EA ++   M+ +GV PNVVT++ + D LC
Sbjct: 418 LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLC 477

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G ++ A++LL  M   G+  NA  YN+L++G C  G + +A      M++   K +V+
Sbjct: 478 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVY 537

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+  CK+ +++ A SL  EML KGIKPT+VTYN L  G     +VE   KL D M
Sbjct: 538 TYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWM 597

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
               +  +   Y + +   C    +    E+++ +R      +  +Y+ LI G CK+  +
Sbjct: 598 LEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNM 657

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           K A      + +        +Y+ +I  L    K  +A +LF DM  +G+  +   ++
Sbjct: 658 KEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYD 715



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 199/405 (49%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L       NV +Y+ L+  LC  G    A  LF+EM +          PD V
Sbjct: 246 EAIELFQELP----HKNVCSYNILLKALCDAGRVKDARQLFDEMASA---------PDVV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G ++ A +LL +M    + P+   Y SV+   C     ++A R+  +M
Sbjct: 293 TYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V  +   ++ ++   C  G +  A +  + M + G+  +   Y T+++G C    +
Sbjct: 353 VQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVEL 412

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L   M +     +  +Y++LI+GYCK  ++  A  +++ M+ +G+ P VVTY  L
Sbjct: 413 EEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTAL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V+ A +L  EM   G+  +   Y + I+GLCK GY+ +A+     +     
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACL 532

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ LID LCKSG L  A  L   +    +   +VTYN++++  C  G+++    
Sbjct: 533 KPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKK 592

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDERN 405
           L   M  K + P+   +N+LM   CI NN  S   E+   M  R+
Sbjct: 593 LLDWMLEKNIHPNAATYNSLMKQYCIENNMKS-TTEIYKGMRSRD 636



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 156/277 (56%), Gaps = 6/277 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G  PNV+TY+ L +GLC+ G    A  L  EM N   E       +A 
Sbjct: 449 EAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL------NAC 502

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLCK G++++A   +  M    + PDV TY ++I   C + D + A  L  EM
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G++P +VT++V+M+  C +G++E   +LL+ M++  + PNA  YN+LM  +C+   +
Sbjct: 563 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNM 622

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E++  M S     N  +Y+ILI G+CK + ++ AL  + EM+ KG + T  +Y+ L
Sbjct: 623 KSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSAL 682

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L +  +   A +LF +M++ G+ A++  Y  +ID
Sbjct: 683 IRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 202/434 (46%), Gaps = 41/434 (9%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++KA G   N  T   LI+GLCR      A+    E   G  EFG    P  V +  
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE--TGGEEFG----PSVVSFNA 275

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ G CK G VD AK     M    + PDV +YN ++ G C A    EA     +M + G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 126 VQPNVVTFSVIMDEL-----------------------------------CKNGKMEEAS 150
           V+P++VT++++ +                                     C+ G +EE+ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L E M+  G++ +   Y  L+   C +GR++ A  L   ME +G K ++ +YS+LI+G 
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E A+ LY EM SK I P     + +  GLFE   +  A   FD + +  VA + 
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   IDG  K G I EA+  ++ +        I +++ LI G CK G+L  A +L  +
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    L+   VTY  +++  C +G M    D+  +MEAK + P  + +  ++ G  +   
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 635

Query: 391 TSKVVELLHRMDER 404
             + V+LL  M  R
Sbjct: 636 LHESVQLLKYMYAR 649



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 196/373 (52%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G +P+++TYS LI+GLC+ G    A+ L+EEM +          P++ 
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR------IYPNSF 481

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + + II GL ++G + +A+     +   ++  +++ YN +I G+    +  EA R + ++
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 541

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P +VTF+ ++   CK GK+ EA +LL+ +   G+ P +  Y TLM+G+C  G +
Sbjct: 542 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 601

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ++   ME+   K    +Y++++ G CK   +  ++ L   M ++G+ P  +TYNT+
Sbjct: 602 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 661

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                + H +++AF+L ++M +H +      Y   I+GLC  G + +A  L  TL+    
Sbjct: 662 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 721

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L   +Y+ +I   C  G ++ A   FH +        +  Y+ +I+ LC    +  A  
Sbjct: 722 RLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 781

Query: 362 LFLDMEAKGVAPD 374
            F  M   G+ PD
Sbjct: 782 FFCMMLTHGIPPD 794



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 205/423 (48%), Gaps = 42/423 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A + F  +  +G  P+V +Y+ L++GLC  G    AL    +M N   E      PD V 
Sbjct: 289 AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE------PDIVT 342

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  + +G    G +  A +++ +M    +NPD+VTY  +I G C   +  E+ +L  +M+
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG++ ++VT++V++  LCK+G+++EA  LL  M  IG++P+   Y+ L+ G C  G V 
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462

Query: 183 RAKELFVSMESMGCKHNVFS-----------------------------------YSILI 207
            A EL+  M S     N F                                    Y+I+I
Sbjct: 463 EAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMI 522

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K   I  A+  Y +++ KGI PT+VT+N+L  G  +  ++  A KL D ++ HG+ 
Sbjct: 523 DGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLV 582

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             +  Y T ++G C+ G +    ++   +     +    +Y+ ++ GLCK GRL  + +L
Sbjct: 583 PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL 642

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CI 386
              +    L  D +TYN +I + C    + KA  L   M    + P  V +N L+ G C+
Sbjct: 643 LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCV 702

Query: 387 RNN 389
             N
Sbjct: 703 YGN 705



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 169/333 (50%), Gaps = 3/333 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V++  +     +   V  A  +L +MK  N+   + TYNS++    + +   +   ++ E
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNE 225

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   GV  N  T  +++D LC+  ++++A   L         P+   +N LM GFC  G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ AK  F  M   G   +V+SY+IL++G C    +E AL   ++M + G++P +VTYN 
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   +  +  A+K+   M  +G+  D   Y   I G C+ G I E+ +L   +    
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +L I +Y+ L+  LCKSGR+  A  L H +    L  D++TY+++IH LC  G +++A 
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           +L+ +M +K + P+    + ++ G       S+
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE 498



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 109/217 (50%)

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++  +++ G   N ++  ILI+G C+   ++ A++   E   +   P+VV++N L  G 
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++  V+ A   F  M ++G+  D ++Y   + GLC  G + EALE    +     E DI
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ L +G    G +  AW++   +    L  D+VTY I+I   C  G ++++  L   
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           M ++G+    V +  L+    ++    + V LLH M+
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  +++A   +P  ITY+ ++ GLC+ G    ++ L + M    G F     PD + Y T
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY-ARGLF-----PDQITYNT 660

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I   CK   + KA +L  QM   ++ P  VTYN +I G C   +  +A RL + + DQ 
Sbjct: 661 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 720

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++   V ++ I+   C  G ++ A      M++ G   +   Y+ +++  C    +  AK
Sbjct: 721 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAK 780

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             F  M + G   +     +++N + ++ +      +++ M+  G+ P
Sbjct: 781 FFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 11/373 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+  TY+ LI  LC  G  + AL +F++M++        C P  V Y+ ++D  CKE   
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGY 211

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A  LL +M+ K   PD+VTYN +I   C   D  EA ++   +   G +P+ VT++ +
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPV 271

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC + + EEA +LL  M      P+   +N ++   C  G V RA ++   M   GC
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGC 331

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLY----SEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             ++ +YS +++G CK + ++ A+ L     +EM+SK   P  VT+NT+   L +    +
Sbjct: 332 TPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFD 391

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDG-LCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           RA K+ DEM  HG   D   Y   +DG LCK+    EAL+L   +       D  +Y  L
Sbjct: 392 RAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
             GL +   ++ A  +F  +    L  D + YN ++  LC   + D A D F  M + G 
Sbjct: 452 AFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGC 511

Query: 372 APDCVAFNTLMLG 384
            PD   +  L+ G
Sbjct: 512 MPDESTYIILVEG 524



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 194/404 (48%), Gaps = 17/404 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +   G +P VI  + LI  LC  G    A    E ++   G    +     + 
Sbjct: 80  ALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA----ERVVEALGPSATI-----IT 130

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+++G C+ G +D A+ ++  +      PD  TYN +IR  C      +A  +F +M+
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDML 187

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+VVT+S+++D  CK    ++A  LL+ M   G  P+   YN L++  C  G V 
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVG 247

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++  S+ S GCK +  +Y+ ++   C ++  E A  L ++M S    P  VT+N + 
Sbjct: 248 EALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI---- 298
             L +   V RA K+  +M  HG   D   Y + +DGLCK   + EA++L + L      
Sbjct: 308 TSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVS 367

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA-LCADGKMD 357
             C  D  +++ +I  LC+ G    A ++   +     I D+ TYN ++   LC   K +
Sbjct: 368 KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTE 427

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A DL   M + G+ PD   + +L  G  R +E  + + +  R+
Sbjct: 428 EALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV 471



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 11/335 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++++ GCEP+++TY+ LIN +C  G    AL    +++N    +G  CKPDAV
Sbjct: 213 QAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL----KVLNSLPSYG--CKPDAV 266

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++  LC     ++A +LL +M   +  PD VT+N+VI   C       A ++  +M
Sbjct: 267 TYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQM 326

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEA----SQLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + G  P+++T+S IMD LCK  +++EA     +LL  M+     P+   +NT++   C 
Sbjct: 327 SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGY-CKNKEIEGALSLYSEMLSKGIKPTVV 236
            G  +RA ++   M   GC  ++ +Y+ +++G+ CK+ + E AL L + M+S G+ P   
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTT 446

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY +L  GL    ++ERA  +F  +Q  G++ D   Y   + GLCK      A++ F  +
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
               C  D  +Y  L++G+   G L+ A EL  +L
Sbjct: 507 VSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 154/303 (50%), Gaps = 6/303 (1%)

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N  +RG     + + A RL   +   G  P V+  ++++ +LC +G++ +A +++E    
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE---A 121

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G       YNT+++G+C  G ++ A+ +   ++S+    + F+Y+ LI   C    +  
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL+++ +ML +G  P+VVTY+ L     +    ++A  L DEM+  G   D   Y   I+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            +C  G + EAL++  +L    C+ D  +Y+ ++  LC S R + A +L   +       
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D VT+N +I +LC  G + +A  +   M   G  PD + ++++M G  +     + ++LL
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 399 HRM 401
             +
Sbjct: 359 KEL 361



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 166/339 (48%), Gaps = 10/339 (2%)

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL + G +D A  L+  +     +P V+  N +I+  C      +A+R+ +E +  G   
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERV-VEAL--GPSA 126

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            ++T++ +++  C+ G ++ A ++++    +   P+ F YN L+   C+ G V  A  +F
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVF 183

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   GC  +V +YSIL++  CK    + A+ L  EM SKG +P +VTYN L   +   
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             V  A K+ + +  +G   D   Y   +  LC +    EA +L   +    C  D  ++
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA----HDLFL 364
           + +I  LC+ G +  A ++   +       D++TY+ ++  LC + ++D+A     +L  
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M +K   PD V FNT++    +     + ++++  M E
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 179/354 (50%), Gaps = 27/354 (7%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           +G EPN++TY++LI+G C T      L L EEM          C PD   Y T+IDGLCK
Sbjct: 4   WGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMT------ATGCLPDINTYNTLIDGLCK 57

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G V +   L  +MK K  NPDV+TY+ +I GFC  +  N A  LF +M+ Q   P+VVT
Sbjct: 58  TGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVT 117

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F  +++  C  G +++A +LLE ++     P+ + Y +L+DGFC   R+  A  +   M 
Sbjct: 118 FPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMA 177

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
              C+ NV  Y+ LI+ +C   +   A  L  EM+  G++P  +TY +L  G      +E
Sbjct: 178 KGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLE 237

Query: 253 RAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
            A K+ + ++R+    AD +AYR  +DGLC+ G +  ALEL   ++          Y  L
Sbjct: 238 EAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVAL 297

Query: 312 IDG---LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           I G   L + GR                  +   Y  +I  L  +G+ +KA+ L
Sbjct: 298 IRGEMTLSRKGR-----------------PNAKVYEAVIQELAREGRHEKANAL 334



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 142/270 (52%), Gaps = 12/270 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF ++KA  C P+VITYS LI G C+     +A  LF++M+           PD V
Sbjct: 63  EVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQ------AALPDVV 116

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+++G C  G VD A+ LL ++   + +PDV TY S++ GFC      EA R+   M
Sbjct: 117 TFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                QPNVV ++ ++D  C  GK   A +LLE M+  GV+PNA  Y +L+ GFC TG +
Sbjct: 177 AKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDL 236

Query: 182 NRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A ++   +E +  CK ++F+Y ++++G C+   +  AL L   +   G  P    Y  
Sbjct: 237 EEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 296

Query: 241 LFIGLFEIHQVERA-FKLFD----EMQRHG 265
           L  G   + +  R   K+++    E+ R G
Sbjct: 297 LIRGEMTLSRKGRPNAKVYEAVIQELAREG 326



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 145/280 (51%), Gaps = 1/280 (0%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PN+VT++ ++   C    ++    L+E M   G  P+   YNTL+DG C TGRV   
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             LF  M++  C  +V +YS LI G+CK   I  A +L+ +ML +   P VVT+ TL  G
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                 V+ A +L +E+     + D + Y + +DG CK   +VEA  + + +   +C+ +
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y+ LID  C +G+  +A++L   +    +  + +TY  +I   C  G +++AH +  
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244

Query: 365 DMEA-KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +E  +    D  A+  +M G  R    S  +ELL  + +
Sbjct: 245 RLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 284



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 36/250 (14%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE--- 247
           M   G + N+ +Y+ LI+G+C    ++  L L  EM + G  P + TYNTL  GL +   
Sbjct: 1   MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGR 60

Query: 248 IHQVERAF--------------------------------KLFDEMQRHGVAADTWAYRT 275
           + +V R F                                 LFD+M +     D   + T
Sbjct: 61  VPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPT 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++G C  G + +A  L   +    C  D+ +Y+ L+DG CK  R+  A  +   + +G 
Sbjct: 121 LVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGE 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              +VV Y  +I A C+ GK   A+ L  +M   GV P+ + + +L+ G     +  +  
Sbjct: 181 CQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAH 240

Query: 396 ELLHRMDERN 405
           ++L R+ ERN
Sbjct: 241 KMLERL-ERN 249



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 24/214 (11%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++    C+PNV+ Y+ LI+  C  G   VA  L EEM+ GNG      +P+A
Sbjct: 167 VEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMV-GNG-----VQPNA 220

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y ++I G C  G +++A ++L ++ +++N   D+  Y  ++ G C     + A  L  
Sbjct: 221 ITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLE 280

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            +   G  P    +  ++                E+ +    RPNA VY  ++      G
Sbjct: 281 AIKQSGTPPRHDIYVALIRG--------------EMTLSRKGRPNAKVYEAVIQELAREG 326

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           R  +A  L  S E +G K +   + ++ N +C N
Sbjct: 327 RHEKANAL--SDELLGNKASKTRF-VITNPHCVN 357


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 208/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +L      P +   + +++GL +   +  A  LF+EM+      G+V  P  V
Sbjct: 129 EALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLRR----GMV--PSVV 179

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+    +G V KA+E+  QM  + I+P+V+TY S+I   C      +A+RLF  M
Sbjct: 180 TYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAM 239

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN  T++V+M   C+   +  A  L + ++  G+ PNA V+ TL+DGFC   R 
Sbjct: 240 KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRF 299

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + AK++F  M   G    V  Y+ L++G  ++ + + ALSLY EM   G+ P   T + +
Sbjct: 300 SEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIV 359

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q++ A +  + ++  GV  +  AY   ID  C+NG + EAL     +  +  
Sbjct: 360 VRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGV 419

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ SYS LIDG  K G+++IA  ++  +    +  +VVTY  +IH    +G +D A  
Sbjct: 420 EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 479

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
              +M   G++P+ +  + L+ G  R N     V  +
Sbjct: 480 FHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFV 516



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 25/390 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +K  G  PN  TY+ L++G C+      A  L++E++N     G++  P+AV
Sbjct: 231 DAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS----GLI--PNAV 284

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+IDG CK     +AK++   M    + P V  YNS++ G   + D+ EA  L+ EM
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  T S+++  LC  G+++ A++ LE + + GV  NA  YN L+D +C  G +
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNL 404

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M  +G + NV SYS LI+G+ K  +++ A+++Y+EM++KGI+P VVTY  L
Sbjct: 405 EEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTAL 464

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ AF+   EM  +G++ +       +DGLC+   + +A+        +K 
Sbjct: 465 IHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKY 524

Query: 302 ELDIRS------------------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             DI S                  Y  LI GL   G+   A +LF  + +  +I+D  TY
Sbjct: 525 S-DIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            ++I   C  G +  A  L+ DM   GV P
Sbjct: 584 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 129/276 (46%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +   + ++D L K  +   A +L + M++ G+ P+   YNTL++     G V +A+E+
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M +     NV +Y+ +I   C+   I  A  L+  M   G++P   TYN L  G  +
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              V  AF L+ E+   G+  +   + T IDG CK     EA ++FR +        +  
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ L+DG  +SG  + A  L+  + R  L  D  T +I++  LC  G++  A      + 
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             GV  +  A+N L+    RN    + +    RM E
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTE 416


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 203/405 (50%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  AL   +  +G   +  T + ++  LC  G        F  M+    E G    P+ V
Sbjct: 199 EVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML----ETGT--PPNVV 252

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  IDGLCK  +V +A  +L +M  + + P+V T+ ++I G C    +  A RLF+++
Sbjct: 253 NYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKL 312

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +     +PNV T++V++   C+ GK+  A  LL  M++ G++PN   Y TL+ G C  G 
Sbjct: 313 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 372

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +RA EL   M+  G   N+++Y+ +I+G+CK  +I+ A  +     S+G+K   +TY  
Sbjct: 373 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 432

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L     +   +  A  LFD M  +G   D  AY + I   C+   + E+ + F    ++ 
Sbjct: 433 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 492

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                ++Y+ +I G CK GR  +A  +F  + +    AD +TY  +I  LC + ++++A 
Sbjct: 493 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 552

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L+  M  K + P  V   TL     R  +TS  V +L R+D+R 
Sbjct: 553 ALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 597



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 9/308 (2%)

Query: 99  NSVIRG----FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + V+RG    F  A    EA  + +EM   G+   V T + ++    + G    A ++ +
Sbjct: 111 HEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFD 170

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M + GV P+   +  L+   C  G+V     L  +M   G   +  + ++++   C+  
Sbjct: 171 GMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKG 230

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             +     +  ML  G  P VV Y     GL +   V++AF + +EM   G+  + + + 
Sbjct: 231 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 290

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKC---ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           T IDGLCK G+   A  LF  L+++K    + ++ +Y+ +I G C+ G+L  A  L   +
Sbjct: 291 TLIDGLCKIGWTERAFRLF--LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L  +  TY  +I   C  G  D+A +L   M+ +G  P+   +N ++ G  +  + 
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408

Query: 392 SKVVELLH 399
            +  ++L 
Sbjct: 409 QEAYKVLR 416



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 6/199 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +     + G + + ITY+ LI   C+ GH   AL+LF+ M+  NG     C PD  
Sbjct: 410 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE-NG-----CCPDIE 463

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I   C++  ++++++   +     + P   TY S+I G+C    S  A R+F  M
Sbjct: 464 AYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM 523

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G   + +T+  ++  LCK  ++EEA  L E M+   + P      TL   +C   + 
Sbjct: 524 VQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKT 583

Query: 182 NRAKELFVSMESMGCKHNV 200
           + A  +   ++     H V
Sbjct: 584 SIAVSVLDRLDKRQQVHTV 602



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 4/219 (1%)

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN-TLF 242
           A   FV+  S+   H V     ++  + +   +  A  +  EM S G+   V T N  L 
Sbjct: 97  AATAFVARGSLPMAHEVMRG--MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLR 154

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           +GL E      A K+FD M R GV  D  ++R  +   C+ G + E   L   +      
Sbjct: 155 VGL-ETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFS 213

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD  + + ++  LC+ GR K   E F  +       +VV Y   I  LC    + +A  +
Sbjct: 214 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHV 273

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  +G+ P+     TL+ G  +   T +   L  ++
Sbjct: 274 LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKL 312


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F+K+K F   P   + + L++   + G T      F++MI      G   KP   
Sbjct: 43  EAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI------GAGAKPTVF 96

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID +CKEG V+ A+ L  +MK + + PD VTYNS+I GF      ++    F EM
Sbjct: 97  TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D   +P+V+T++ +++  CK GK+ +  +    M + G++PN   Y+TL+D FC  G +
Sbjct: 157 KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMM 216

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A + +V M  +G   N ++Y+ LI+ YCK   +  A  L +EML  G++  VVTY  L
Sbjct: 217 QQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTAL 276

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILK 300
             GL           L DEM    +      +   IDGLCKN  + +A++ F R      
Sbjct: 277 IDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 336

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +   Y+ +IDGLCK  +++ A  LF  + +  L+ D   Y  ++      G + +A 
Sbjct: 337 LQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEAL 396

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M   G+  D +A+ +L+ G    N+  K    L  M
Sbjct: 397 ALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 193/388 (49%), Gaps = 14/388 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEF-GVVCKPDAVIYT 64
            F  +   G +P V TY+ +I+ +C+ G    A  LFEEM     +F G++  PD V Y 
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM-----KFRGLI--PDTVTYN 134

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           ++IDG  K G +D       +MKD    PDV+TYN++I  FC      +    F EM   
Sbjct: 135 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRN 194

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PNVV++S ++D  CK G M++A +    M ++G+ PN + Y +L+D +C  G ++ A
Sbjct: 195 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDA 254

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M  +G + NV +Y+ LI+G C  +     L L  EM+   IK TVVT+  L  G
Sbjct: 255 FRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDG 314

Query: 245 LFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           L +   V +A   F  +    G+ A+   Y   IDGLCK   +  A  LF  +       
Sbjct: 315 LCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVP 374

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +Y+ L+DG  K G +  A  L   +    +  D++ Y  ++  L    ++ KA    
Sbjct: 375 DRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFL 434

Query: 364 LDMEAKGVAPD---CVAF--NTLMLGCI 386
            +M  +G+ PD   C++       LGCI
Sbjct: 435 EEMIGEGIHPDEVLCISVLKKHYELGCI 462



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 36/385 (9%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           VC P   ++  +   L   G V++A +   +MK   + P   + N ++  F     ++  
Sbjct: 20  VCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 79

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           KR F +M+  G +P V T+++++D +CK G +E A  L E M   G+ P+   YN+++DG
Sbjct: 80  KRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDG 139

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  + EM   G+KP 
Sbjct: 140 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VV+Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 200 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259

Query: 295 TLRILKCELDIRSYSC-----------------------------------LIDGLCKSG 319
            +  +  E ++ +Y+                                    LIDGLCK+ 
Sbjct: 260 EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319

Query: 320 RLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            +  A + F  +     L A+   Y  MI  LC   +++ A  LF  M  KG+ PD  A+
Sbjct: 320 LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
            +LM G  +     + + L  +M E
Sbjct: 380 TSLMDGNFKQGNVLEALALRDKMVE 404



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 156/327 (47%), Gaps = 42/327 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +    F ++K   CEP+VITY+ LIN  C+ G     L  F EM   NG      KP+ V
Sbjct: 148 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREM-KRNG-----LKPNVV 201

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++D  CKEG + +A +  + M+   + P+  TY S+I  +C   + ++A RL  EM
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI---------------------- 159
           +  GV+ NVVT++ ++D LC      E   LL+ M+++                      
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 160 --------------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
                         G++ NA +Y  ++DG C   +V  A  LF  M   G   +  +Y+ 
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTS 381

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++G  K   +  AL+L  +M+  G+K  ++ Y +L  GL   +Q+++A    +EM   G
Sbjct: 382 LMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 441

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALEL 292
           +  D     + +    + G I EA+EL
Sbjct: 442 IHPDEVLCISVLKKHYELGCINEAVEL 468



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 42/295 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++K  G +PNV++YSTL++  C+ G    A+  + +M       G+V  P+   YT+
Sbjct: 187 FFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM----RRVGLV--PNEYTYTS 240

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM--- 122
           +ID  CK G +  A  L  +M    +  +VVTY ++I G C   +  E   L  EM+   
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300

Query: 123 ---------------------------------DQGVQPNVVTFSVIMDELCKNGKMEEA 149
                                            D G+Q N   ++ ++D LCK  ++E A
Sbjct: 301 IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAA 360

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
           + L E M Q G+ P+   Y +LMDG    G V  A  L   M   G K ++ +Y+ L+ G
Sbjct: 361 TTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWG 420

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                +++ A S   EM+ +GI P  V   ++    +E+  +  A +L   + +H
Sbjct: 421 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKH 475


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 198/394 (50%), Gaps = 8/394 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F   P   TYS  I  LC++      + L EE++    +FG  C PD       +  L
Sbjct: 224 KGFCLTP--FTYSRWITALCQSNR----IELVEELLTDMDKFG--CFPDFWACNIYVHYL 275

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C    +  A +++ +M  K   PDVVTY +V+   C     +EA  L+ EM+ +G++P+V
Sbjct: 276 CGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDV 335

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           V    ++  LCKN K++EA +L   M+ + ++ N  +YN L+ GF   G + +A +    
Sbjct: 336 VACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSF 395

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+  GC+ +V +Y+IL+N YC     + A +L  +M   G+ P   +YN L  GL + HQ
Sbjct: 396 MQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQ 455

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +++AF    +    G   D  +    ID  C+   +  AL LF+ +     + D  +Y  
Sbjct: 456 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+GL   G   +A ELF  +    ++ +V  YNIM+H LC  G    A  +F  M  K 
Sbjct: 516 LINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKE 575

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V+PD V FNTL+    +++   + ++L   M  +
Sbjct: 576 VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTK 609



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 192/399 (48%), Gaps = 8/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYT 64
           L T +  FGC P+    +  ++ LC       AL + E+M + G G       PD V YT
Sbjct: 252 LLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTG-------PDVVTYT 304

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++  LC      +A  L  +M  + + PDVV   ++I G C     +EA  L   M+  
Sbjct: 305 TVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTL 364

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            +Q NV  ++ ++    + G +E+A + +  M + G  P+   YN L++ +C  G  ++A
Sbjct: 365 DIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKA 424

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + L   ME  G   + +SY+IL+ G CK  +++ A +  S+ +  G    +V+ N L   
Sbjct: 425 ENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDA 484

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V  A  LF EM   G+ AD   Y   I+GL   GY   A ELF  +   K   +
Sbjct: 485 FCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPN 544

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y+ ++  LCK G  K A ++F  + +  +  D VT+N +I+ L    +  +A DLF 
Sbjct: 545 VNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFK 604

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M  KGV PD + F  ++ G +   + +   E+   M E
Sbjct: 605 EMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMME 643



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K+   G  P+V+TY+T+++ LC       A+ L+EEM+          KPD V
Sbjct: 283 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRG------LKPDVV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I GLCK   VD+A EL  +M   +I  +V  YN++I GF  A    +A +    M
Sbjct: 337 ACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+VVT++++++  C  G  ++A  L+  M   GV P+ + YN L+ G C   ++
Sbjct: 397 QRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQL 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A         +G   ++ S +ILI+ +C+ K++  AL+L+ EM  KGI+   VTY  L
Sbjct: 457 DKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGIL 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF I     A +LFD+M    +  +   Y   +  LCK G+   A ++F  +   + 
Sbjct: 517 INGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI  L KS R   A +LF  +    +  D +T+  +I  L  +GK   A++
Sbjct: 577 SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYE 636

Query: 362 LFLDMEAKGVAPD 374
           ++  M   G+  D
Sbjct: 637 IWEYMMENGIILD 649



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 151/314 (48%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            E L +++ + +      Y  ++ G+  A   +     F EM+  G +   V ++  +  
Sbjct: 145 SEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGV 204

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           + KN   +   +   + +  G     F Y+  +   C + R+   +EL   M+  GC  +
Sbjct: 205 MIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPD 264

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            ++ +I ++  C +  +  AL +  +M  KG  P VVTY T+   L +  +   A  L++
Sbjct: 265 FWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWE 324

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           EM R G+  D  A    I GLCKN  + EA EL   +  L  +L++  Y+ LI G  ++G
Sbjct: 325 EMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAG 384

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            ++ A++    + R     DVVTYNI+++  C+ G  DKA +L   ME  GV PD  ++N
Sbjct: 385 SIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYN 444

Query: 380 TLMLGCIRNNETSK 393
            L+ G  + ++  K
Sbjct: 445 ILLKGLCKAHQLDK 458



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 165/395 (41%), Gaps = 18/395 (4%)

Query: 23  STLINGLC--RTGHTIVALNLFEEMING--NGEFGVVCK------PDAVIYTTIIDGLCK 72
           S+LI  LC   T   IV+         G  N   G  C+      P     + +I G   
Sbjct: 11  SSLITRLCVLHTVSWIVSSRQVARFSTGVDNANPGAHCRLSELFRPVRTETSCVIIGRAL 70

Query: 73  E-GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNV 130
           E G   ++ EL L+     ++P VV  N V+RG     DS  A R +     + G   N 
Sbjct: 71  ECGRWSESVELELEGLHVELDPFVV--NKVLRGLL---DSGMAVRFYWWAESRPGFYHNN 125

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
              + I+  L  +      S+ L  +   GV  +  +Y  L+ G+   G+ +   E F  
Sbjct: 126 FAIAYIISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDE 185

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M + GC+     Y+  I    KN   +     Y+  L+KG   T  TY+     L + ++
Sbjct: 186 MVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNR 245

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E   +L  +M + G   D WA   ++  LC +  + +AL++   + +     D+ +Y+ 
Sbjct: 246 IELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTT 305

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           ++  LC   R   A  L+  + R  L  DVV    +I  LC + K+D+A +L   M    
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  +   +N L+ G  R     K  + +  M +RN
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFM-QRN 399


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 198/394 (50%), Gaps = 8/394 (2%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F   P   TYS  I  LC++      + L EE++    +FG  C PD       +  L
Sbjct: 224 KGFCLTP--FTYSRWITALCQSNR----IELVEELLTDMDKFG--CFPDFWACNIYVHYL 275

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C    +  A +++ +M  K   PDVVTY +V+   C     +EA  L+ EM+ +G++P+V
Sbjct: 276 CGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDV 335

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           V    ++  LCKN K++EA +L   M+ + ++ N  +YN L+ GF   G + +A +    
Sbjct: 336 VACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSF 395

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+  GC+ +V +Y+IL+N YC     + A +L  +M   G+ P   +YN L  GL + HQ
Sbjct: 396 MQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQ 455

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +++AF    +    G   D  +    ID  C+   +  AL LF+ +     + D  +Y  
Sbjct: 456 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGI 515

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+GL   G   +A ELF  +    ++ +V  YNIM+H LC  G    A  +F  M  K 
Sbjct: 516 LINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKE 575

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V+PD V FNTL+    +++   + ++L   M  +
Sbjct: 576 VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTK 609



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 192/399 (48%), Gaps = 8/399 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYT 64
           L T +  FGC P+    +  ++ LC       AL + E+M + G G       PD V YT
Sbjct: 252 LLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTG-------PDVVTYT 304

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++  LC      +A  L  +M  + + PDVV   ++I G C     +EA  L   M+  
Sbjct: 305 TVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTL 364

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            +Q NV  ++ ++    + G +E+A + +  M + G  P+   YN L++ +C  G  ++A
Sbjct: 365 DIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKA 424

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + L   ME  G   + +SY+IL+ G CK  +++ A +  S+ +  G    +V+ N L   
Sbjct: 425 ENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDA 484

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V  A  LF EM   G+ AD   Y   I+GL   GY   A ELF  +   K   +
Sbjct: 485 FCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPN 544

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +  Y+ ++  LCK G  K A ++F  + +  +  D VT+N +I+ L    +  +A DLF 
Sbjct: 545 VNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFK 604

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +M  KGV PD + F  ++ G +   + +   E+   M E
Sbjct: 605 EMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMME 643



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 190/373 (50%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  K+   G  P+V+TY+T+++ LC       A+ L+EEM+          KPD V
Sbjct: 283 DALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRG------LKPDVV 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I GLCK   VD+A EL  +M   +I  +V  YN++I GF  A    +A +    M
Sbjct: 337 ACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+VVT++++++  C  G  ++A  L+  M   GV P+ + YN L+ G C   ++
Sbjct: 397 QRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQL 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A         +G   ++ S +ILI+ +C+ K++  AL+L+ EM  KGI+   VTY  L
Sbjct: 457 DKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGIL 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF I     A +LFD+M    +  +   Y   +  LCK G+   A ++F  +   + 
Sbjct: 517 INGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ LI  L KS R   A +LF  +    +  D +T+  +I  L  +GK   A++
Sbjct: 577 SPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYE 636

Query: 362 LFLDMEAKGVAPD 374
           ++  M   G+  D
Sbjct: 637 IWEYMMENGIILD 649



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 4/323 (1%)

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIR----GFCYANDSNEAKRLFIEMMDQGVQPNV 130
           FVD    LLL+   +  +  V  + S+ R    G+  A   +     F EM+  G +   
Sbjct: 136 FVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           V ++  +  + KN   +   +   + +  G     F Y+  +   C + R+   +EL   
Sbjct: 196 VDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+  GC  + ++ +I ++  C +  +  AL +  +M  KG  P VVTY T+   L +  +
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
              A  L++EM R G+  D  A    I GLCKN  + EA EL   +  L  +L++  Y+ 
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI G  ++G ++ A++    + R     DVVTYNI+++  C+ G  DKA +L   ME  G
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 371 VAPDCVAFNTLMLGCIRNNETSK 393
           V PD  ++N L+ G  + ++  K
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDK 458



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 165/395 (41%), Gaps = 18/395 (4%)

Query: 23  STLINGLC--RTGHTIVALNLFEEMING--NGEFGVVCK------PDAVIYTTIIDGLCK 72
           S+LI  LC   T   IV+         G  N   G  C+      P     + +I G   
Sbjct: 11  SSLITRLCVLHTVSWIVSSRQVARFSTGVDNANPGAHCRLSELFRPVRTETSCVIIGRAL 70

Query: 73  E-GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNV 130
           E G   ++ EL L+     ++P VV  N V+RG    +DS  A R +     + G   N 
Sbjct: 71  ECGRWSESVELELEGLHVELDPFVV--NKVLRGL---SDSGMAVRFYWWAESRPGFYHNN 125

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
              + I+  L  +       + L  +   GV  +  +Y  L+ G+   G+ +   E F  
Sbjct: 126 FAIAYIISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDE 185

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M + GC+     Y+  I    KN   +     Y+  L+KG   T  TY+     L + ++
Sbjct: 186 MVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNR 245

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E   +L  +M + G   D WA   ++  LC +  + +AL++   + +     D+ +Y+ 
Sbjct: 246 IELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTT 305

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           ++  LC   R   A  L+  + R  L  DVV    +I  LC + K+D+A +L   M    
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  +   +N L+ G  R     K  + +  M +RN
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFM-QRN 399


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 196/378 (51%), Gaps = 8/378 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           + K+ A  CEP ++TY+ L++GLC+      A ++FEEMI          KPD + Y+++
Sbjct: 129 YEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH------KPDIIAYSSL 182

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           IDGL K G VD+A++L+  M  +   P  V Y S++ G C      EA +   EM  + +
Sbjct: 183 IDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 242

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           +P V T+S I+      GK+EEA  ++E M      P+   Y   ++     GR   A++
Sbjct: 243 RPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEK 302

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +F +M   GCK ++ +Y I+I+ +CK   +  A  +   M    +KP    Y  +  G  
Sbjct: 303 VFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFV 362

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD-- 304
           +  ++E A +L+  + + G+   T  Y T I+ LCK   + EALEL R ++  K EL+  
Sbjct: 363 KSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPS 422

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           I +YS +I GL K G  + A++L   +    +I D  TY  +I  L   GK+ +A +L  
Sbjct: 423 IVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLE 482

Query: 365 DMEAKGVAPDCVAFNTLM 382
           +M   G+ PD   + TL+
Sbjct: 483 EMLKAGIFPDDHTYGTLV 500



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 201/404 (49%), Gaps = 11/404 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-----FGVVCKPD 59
           AL  ++KA G   N  T+  +++ LC       A++ F    N   E     F  +  PD
Sbjct: 50  ALLREMKARGITSNGATHGVILSALCARRDLDKAVSYF----NSRTEEACRLFEAIEAPD 105

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +V YT I+DGL K G  D   E   +M      P ++TY  ++ G C A+    A  +F 
Sbjct: 106 SVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFE 165

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G +P+++ +S ++D L K G+++EA +L++LMI  G  P A  Y +++ G C  G
Sbjct: 166 EMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCG 225

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A +    M     +  V +YS ++ GY    ++E A ++  EM  +   P  ++Y 
Sbjct: 226 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYT 285

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
                L+ I + E A K+F+ M   G   D   Y   ID  CK G +  A  + R +   
Sbjct: 286 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 345

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   Y+ ++DG  KS RL+ A EL+  + +  ++   VTYN +I+ALC   KMD+A
Sbjct: 346 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 405

Query: 360 HDLFLDMEAKG--VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +L  +M+ +   + P  V ++ ++ G  +     +  +LL  M
Sbjct: 406 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 192/401 (47%), Gaps = 21/401 (5%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEM----INGNGEFGVVCKPDAVIYTTIIDGLC 71
           EPNV +++ L+ G        V   L  EM    I  NG            +  I+  LC
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNG----------ATHGVILSALC 75

Query: 72  KEGFVDKA-------KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
               +DKA        E   ++ +    PD VTY +++ G   A + +     + +M+  
Sbjct: 76  ARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVAS 135

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
             +P ++T++V++D LCK  K+E A  + E MI+ G +P+   Y++L+DG    GRV+ A
Sbjct: 136 KCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEA 195

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           ++L   M + G      +Y+ ++ G CK   I+ A+    EM  + ++P V TY+ +  G
Sbjct: 196 RKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTG 255

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
              + +VE AF + +EM     A DT +Y  FI+ L   G   EA ++F T+    C+ D
Sbjct: 256 YIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 315

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y  +ID  CK G +  A  +   + +  +  +   Y +++       ++++A +L+ 
Sbjct: 316 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 375

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +   G+ P  V +NT++    +  +  + +ELL  M  R 
Sbjct: 376 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 416



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 9/242 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   GC+P++ TY  +I+  C+ G    A ++   M           KP+  
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA------AVKPNRY 352

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT I+DG  K   +++A EL  ++    I P  VTYN+VI   C     +EA  L  EM
Sbjct: 353 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 412

Query: 122 M--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
               + ++P++VT+S+I+  L K G  E A  LL  MI  GV P+ F Y +L+      G
Sbjct: 413 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 472

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+RA EL   M   G   +  +Y  L+   C++ +++ A  L  EM+  G  P   T+ 
Sbjct: 473 KVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFK 531

Query: 240 TL 241
            +
Sbjct: 532 AV 533



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 10/273 (3%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G++ +A    +  I     PN   +N L+ GF           L   M++ G   N
Sbjct: 7   LVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSN 63

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIK-------PTVVTYNTLFIGLFEIHQVE 252
             ++ ++++  C  ++++ A+S ++    +  +       P  VTY  +  GLF+    +
Sbjct: 64  GATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYD 123

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
              + +++M           Y   +DGLCK   +  A ++F  +     + DI +YS LI
Sbjct: 124 AGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLI 183

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DGL K+GR+  A +L   +         V Y  ++  LC  G++ +A     +M  + + 
Sbjct: 184 DGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLR 243

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           P    ++ ++ G I   +  +   ++  M +R+
Sbjct: 244 PRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRD 276


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 217/464 (46%), Gaps = 68/464 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF K+   GC PN  T   L+ GLCR G    AL    E++N N    +    + V
Sbjct: 168 HALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL----ELVNNNNSCRIA---NRV 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T++   C+E   ++A+ L+ +M +  + PDVVT+NS I   C A    EA R+F +M
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 122 -MDQGV---QPNVVTFSVIMDELCKNGKMEEASQLLELMIQI------------------ 159
            MD  +   +PNVVTF++++   CK+G M +A  L+E M ++                  
Sbjct: 281 QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLR 340

Query: 160 -----------------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
                            G+ PNA+ YN +MDG C    ++ A+ L   M   G   +  +
Sbjct: 341 NGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVA 400

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YS L++GYC   ++  A S+  EM+  G +P   T NTL   L++  +   A ++  +M 
Sbjct: 401 YSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMN 460

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALEL-----------------FRTL-----RILK 300
                 DT      ++GLC+NG + +A E+                 F +L      +  
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y+ LI+GLCK GRL+ A + F  +    L  D VTY+  I + C  GK+  A 
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +  DME  G +     +N L+LG   NN+  ++  L   M E+
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 194/369 (52%), Gaps = 11/369 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L++ + A    P   T++ LI+ LC +     AL LFE+M          C P+      
Sbjct: 137 LYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKG------CCPNEFTLGI 190

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC+ G V +A EL+       I   VV YN+++  FC    +NEA+RL   M + G
Sbjct: 191 LVRGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELG 249

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
           V P+VVTF+  +  LC+ GK+ EAS++   +++  ++G+ RPN   +N ++ GFC  G +
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ L  +M+ +G   ++  Y+I + G  +N E+  A  +  EM++KGI+P   TYN +
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL   H +  A  L D M R+GV  DT AY T + G C  G + EA  +   +    C
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  + + L+  L K GR   A E+   +       D VT NI+++ LC +G++DKA +
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASE 489

Query: 362 LFLDMEAKG 370
           +  +M   G
Sbjct: 490 IVSEMWTNG 498



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 213/454 (46%), Gaps = 59/454 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G  P+V+T+++ I+ LCR G  + A  +F +M   + E G+  +P+ V
Sbjct: 237 EAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM-QMDAELGLP-RPNVV 294

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G CK G +  A+ L+  MK       +  YN  + G     +  EA+ +  EM
Sbjct: 295 TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEM 354

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++PN  T++++MD LC+N  + +A  L++LM++ GV P+   Y+TL+ G+C  G+V
Sbjct: 355 VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414

Query: 182 NRAKELFVSMESMGCKHNVFSYS-----------------------------------IL 206
             AK +   M   GC+ N ++ +                                   I+
Sbjct: 415 FEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIV 474

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK----------------------PTVVTYNTLFIG 244
           +NG C+N E++ A  + SEM + G                        P  +TY TL  G
Sbjct: 475 VNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLING 534

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++ ++E A K F EM    +  D+  Y TFI   CK G I  A  + + +    C   
Sbjct: 535 LCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKT 594

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +++Y+ LI GL  + ++   + L   +    +  D+ TYN +I  LC  GK   A  L  
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +M  KG++P+  +F  L+    ++++     EL 
Sbjct: 655 EMLDKGISPNVSSFKILIKAFSKSSDFKVACELF 688



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 188/385 (48%), Gaps = 29/385 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +  ++ A G EPN  TY+ +++GLCR      A  L + M+  NG +     PD 
Sbjct: 345 LEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMR-NGVY-----PDT 398

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+T++ G C  G V +AK +L +M      P+  T N+++        + EA+ +  +
Sbjct: 399 VAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQK 458

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------ 162
           M ++  QP+ VT +++++ LC+NG++++AS+++  M   G                    
Sbjct: 459 MNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNV 518

Query: 163 ----PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P+   Y TL++G C  GR+  AK+ F+ M +   + +  +Y   I  +CK  +I  
Sbjct: 519 SNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISS 578

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  +  +M   G   T+ TYN L +GL   +Q+   + L DEM+  G++ D   Y   I 
Sbjct: 579 AFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIIT 638

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            LC+ G   +A+ L   +       ++ S+  LI    KS   K+A ELF  +   +   
Sbjct: 639 CLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE-VALNICGR 697

Query: 339 DVVTYNIMIHALCADGKMDKAHDLF 363
               Y++M + L A G++ +A +LF
Sbjct: 698 KEALYSLMFNELLAGGQLSEAKELF 722



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 162/344 (47%), Gaps = 19/344 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN--------GNGEF 52
           +EA  +  K+     +P+ +T + ++NGLCR G    A  +  EM          GN   
Sbjct: 450 LEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFA 509

Query: 53  GVV--------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
            ++        C PD + YTT+I+GLCK G +++AK+  ++M  KN+ PD VTY++ I  
Sbjct: 510 SLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWS 569

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           FC     + A R+  +M   G    + T++ ++  L  N ++ E   L + M + G+ P+
Sbjct: 570 FCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPD 629

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN ++   C  G+   A  L   M   G   NV S+ ILI  + K+ + + A  L+ 
Sbjct: 630 ICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689

Query: 225 EMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             L+  G K  +  Y+ +F  L    Q+  A +LF+      +    + Y+  I  LC++
Sbjct: 690 VALNICGRKEAL--YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQD 747

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
             + +A  L   L       D  S+  +IDGL K G  + A EL
Sbjct: 748 ERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADEL 791



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 181/393 (46%), Gaps = 12/393 (3%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++I+   ++  L + GH   A+  F+ +     +F  +  P   +Y  ++    +   
Sbjct: 78  HPSLIS---MVRVLAQLGHVDDAITHFKSL---RAQFPSL-SPSLPLYNLLLRSTLRHHR 130

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
                 L   M    + P   T+N +I   C +   + A +LF +M  +G  PN  T  +
Sbjct: 131 PGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGI 190

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++  LC+ G +++A +L+       +  N  VYNTL+  FC     N A+ L   M  +G
Sbjct: 191 LVRGLCRAGLVKQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELG 249

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----IKPTVVTYNTLFIGLFEIHQV 251
              +V +++  I+  C+  ++  A  ++ +M         +P VVT+N +  G  +   +
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A  L + M++ G       Y  ++ GL +NG ++EA  +   +     E +  +Y+ +
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +DGLC++  L  A  L   + R  +  D V Y+ ++H  C+ GK+ +A  +  +M   G 
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            P+    NTL+    +   T +  E+L +M+E+
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEK 462



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 11/293 (3%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+ ITY+TLINGLC+ G    A   F EM+  N       +PD+V Y T I   CK+G
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKN------LRPDSVTYDTFIWSFCKQG 574

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            +  A  +L  M+    +  + TYN++I G    N   E   L  EM ++G+ P++ T++
Sbjct: 575 KISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYN 634

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF-VSMES 193
            I+  LC+ GK ++A  LL  M+  G+ PN   +  L+  F  +     A ELF V++  
Sbjct: 635 NIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNI 694

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K  +  YS++ N      ++  A  L+   L + +      Y  L   L +  ++  
Sbjct: 695 CGRKEAL--YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLAD 752

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           A  L  ++   G   D  ++   IDGL K G   +A EL +  R+++ EL+ R
Sbjct: 753 ANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAK--RMMELELEDR 803



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 9/170 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L  ++   G  PNV ++  LI    ++    VA  LFE  +N       +C     
Sbjct: 648 DAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALN-------ICGRKEA 700

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+ + + L   G + +AKEL     D+ +      Y  +I   C      +A  L  ++
Sbjct: 701 LYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKL 760

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV--RPNAFVYN 169
           +D+G   +  +F  ++D L K G   +A +L + M+++ +  RP    Y+
Sbjct: 761 IDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYS 810


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 167/295 (56%), Gaps = 24/295 (8%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ++Y TLINGLC+ G T  AL L +E+         + + D V+YT II+GLCK+  VD A
Sbjct: 120 VSYETLINGLCKVGETRAALRLLKEVNEK------IVQYDVVMYTAIINGLCKDKLVDDA 173

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
            +L  +M  K ++PDV TYN++I GFC      +A  LF +M  + V+ +  TF+ ++  
Sbjct: 174 FDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSA 233

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-------- 191
            CK G + E   ++ +M++ GV+P+   YN+LMDG+CL   V++AK +F +M        
Sbjct: 234 FCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTAN 293

Query: 192 -------ESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                  + M CK    +  +YS LI+G+CK+  I  AL L  EM  +G  P ++TYN++
Sbjct: 294 VRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSI 353

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
              L +IH VE+   L  +++  G+  D + Y    +GL K+G + EA E+F  L
Sbjct: 354 LYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 408



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 192/395 (48%), Gaps = 43/395 (10%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F +L      P +  +  ++  L  +    +AL+ F + ++  G      KPD   Y  +
Sbjct: 51  FNRLTNQIPTPPISQFGRILASLALSNRYSIALS-FHQKLHFKG-----IKPDLFTYNVL 104

Query: 67  IDGLCKEG---FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           I+   + G   F+D+                 V+Y ++I G C   ++  A RL  E+ +
Sbjct: 105 INCFSQLGHTHFLDR-----------------VSYETLINGLCKVGETRAALRLLKEVNE 147

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           + VQ +VV ++ I++ LCK+  +++A  L   M+   V P+ F YN ++ GFC+ GR+  
Sbjct: 148 KIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKD 207

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  LF  M+    + + ++++ L++ +CK   +    ++ + M+ +G+KP ++TYN+L  
Sbjct: 208 AIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMD 267

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G   + +V++A  +F+ M + GV A+                 V  + LF+ +   +   
Sbjct: 268 GYCLVKEVDKAKNIFNTMVQRGVTAN-----------------VRTMNLFQEMHCKEIIP 310

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D  +YS LIDG CKSGR+  A EL   +       +++TYN +++ALC    ++K   L 
Sbjct: 311 DTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALL 370

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
             ++ KG+ PD   +  L  G  ++    +  E+ 
Sbjct: 371 RKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIF 405



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 23/260 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+T++ A    P+V TY+ +I G C  G    A+ LF +M   N E       D  
Sbjct: 172 DAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVE------ADEY 225

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++   CKEG V + K ++  M  + + PD++TYNS++ G+C   + ++AK +F  M
Sbjct: 226 TFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTM 285

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  NV T ++  +  CK                  + P+   Y++L+DGFC +GR+
Sbjct: 286 VQRGVTANVRTMNLFQEMHCKE-----------------IIPDTIAYSSLIDGFCKSGRI 328

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL   M   G   N+ +Y+ ++   CK   +E  ++L  ++  KGI+P   TY  L
Sbjct: 329 PQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTIL 388

Query: 242 FIGLFEIHQVERAFKLFDEM 261
             GLF+  ++E A ++F ++
Sbjct: 389 TNGLFKDGRLEEAREIFPDL 408



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 160/345 (46%), Gaps = 35/345 (10%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + IYT   +    E  + +   L  Q+      P +  +  ++     +N  + A     
Sbjct: 32  STIYTQFNNNPHHENLISRFNRLTNQIP----TPPISQFGRILASLALSNRYSIALSFHQ 87

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++  +G++P++ T++V+++   + G      ++               Y TL++G C  G
Sbjct: 88  KLHFKGIKPDLFTYNVLINCFSQLGHTHFLDRV--------------SYETLINGLCKVG 133

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               A  L   +     +++V  Y+ +ING CK+K ++ A  LY+EM++K + P V TYN
Sbjct: 134 ETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYN 193

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  G   + +++ A  LF++M+   V AD + + T +   CK G + E   +   +   
Sbjct: 194 AMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKE 253

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + DI +Y+ L+DG C    +  A  +F+++ +  + A+V T N               
Sbjct: 254 GVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMN--------------- 298

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             LF +M  K + PD +A+++L+ G  ++    + +EL+  M +R
Sbjct: 299 --LFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDR 341


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 209/442 (47%), Gaps = 46/442 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG-HTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A   F ++K F C P+V TY+ ++  + R     ++A  ++ EM+  N      C P+ 
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCN------CSPNL 198

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  ++DGL K+G    A+++   M  + I+P+ VTY  +I G C      +A++LF E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYE 258

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V  + ++D  CK G+M EA +LL L  + G       Y++L+DG     R
Sbjct: 259 MKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             +A EL+ +M     K ++  Y+ILI G  K  +IE AL L   M SKGI P    YN 
Sbjct: 319 YTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNA 378

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L     +E    L  EM       D   +   I  +C+NG + +A E+F  +    
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSG 438

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG-------------------------V 335
           C   + +++ LIDGLCKSG LK A  L H +  G                         +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSI 498

Query: 336 LIA--------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           L A              D+V+YN++I+  C +G +D A  L   ++ KG++PD V +NTL
Sbjct: 499 LKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTL 558

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           + G  R     +  +L +  D+
Sbjct: 559 INGLHRVGREEEAFKLFYAKDD 580



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 207/462 (44%), Gaps = 94/462 (20%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           YS+LI+GL R      A  L+  M+  N       KPD ++YT +I GL K G ++ A +
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKRN------IKPDIILYTILIQGLSKAGKIEDALK 359

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           LL  M  K I PD   YN+VI+  C      E + L +EM +    P+  T ++++  +C
Sbjct: 360 LLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--------- 192
           +NG + +A ++   + + G  P+   +N L+DG C +G +  A+ L   ME         
Sbjct: 420 RNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 193 ------------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
                                           G   ++ SY++LING+C+  +I+GAL L
Sbjct: 480 RLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKL 539

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF---DEMQRHGVAADTWAYRTFIDG 279
            + +  KG+ P  VTYNTL  GL  + + E AFKLF   D+  RH  A     YR+ +  
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF-RHSPA----VYRSLMTW 594

Query: 280 LCKNGYIVEALELF----------------------------RTLRIL------KCELDI 305
            C+   ++ A  L+                            R LR L      K EL +
Sbjct: 595 SCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTL 654

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-- 363
             Y+  + GLC+SGR   A  +F  L    ++    +   +IH LC   ++D A D+F  
Sbjct: 655 GPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFLY 714

Query: 364 -LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV-ELLHRMDE 403
            LD   K +   C   N L+   +++ E  ++V +L +RM+ 
Sbjct: 715 TLDNNFKLMPRVC---NYLLSSLLQSREKMEIVSQLTNRMER 753



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-AKRL 117
           D+  +  +I    K G  +KA E   +MK+ +  PDV TYN ++R     +     A  +
Sbjct: 126 DSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAV 185

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + EM+     PN+ TF ++MD L K G+  +A ++ + M   G+ PN   Y  L+ G C 
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G    A++LF  M++ G   +  +++ L++G+CK   +  A  L       G    +  
Sbjct: 246 RGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y++L  GLF   +  +AF+L+  M +  +  D   Y   I GL K G I +AL+L R++ 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMP 365

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D   Y+ +I  LC  G L+    L   +       D  T+ I+I ++C +G + 
Sbjct: 366 SKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           KA ++FL++E  G +P    FN L+ G  ++ E  +   LLH+M+
Sbjct: 426 KAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 18/359 (5%)

Query: 47  NGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
           +GN EF         I   +I  L K+  ++ A E L+    KNI   V+    V R   
Sbjct: 26  SGNAEFN--------ISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIK-EEVNRQLG 76

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
           +        R FI    +    +  +F +++D L ++   +   Q LE +   GV  +++
Sbjct: 77  F--------RFFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSY 128

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI-EGALSLYSE 225
            +  L+  +   G   +A E F  M+   C+ +VF+Y++++    +       A ++Y+E
Sbjct: 129 CFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNE 188

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P + T+  L  GL++  +   A K+FD+M   G++ +   Y   I GLC+ G 
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
             +A +LF  ++      D  +++ L+DG CK GR+  A+EL     +   +  +  Y+ 
Sbjct: 249 PEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I  L    +  +A +L+ +M  + + PD + +  L+ G  +  +    ++LL  M  +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSK 367



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 1/216 (0%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF-IGLFEIH 249
           ++S G   + + + +LI+ Y K    E A+  +  M     +P V TYN +  I + E  
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDV 177

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
               AF +++EM +   + + + +   +DGL K G   +A ++F  +       +  +Y+
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI GLC+ G  + A +LF+ +       D V +N ++   C  G+M +A +L    E  
Sbjct: 238 ILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G       +++L+ G  R    ++  EL   M +RN
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN 333


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 209/433 (48%), Gaps = 30/433 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  LF ++ + G +  V+TY+ +   LC+ G    A  + +EM+               
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 47  ----NGNGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                G G   +V            KP+  + T  I  LCK G  ++A E+  Q+  K +
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             +V T N++I G C  N+  EA ++   M++ GV+ + +T+++++   CK  KM+EA Q
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L + MI+ G +P+ F +N  +  +C  G+V     L   M+S G K ++ +Y  +I+GYC
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K K++  A    +E++  G++P  V YN L  G      +  A  + D M+ +G+     
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y + +  +C  G + E   +F    +   EL +  Y+ +I G CK G++  A   F  +
Sbjct: 634 TYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 693

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +  + +TY  ++ A    G  ++A  LF +M + G+ PD V++NTL+ G    +  
Sbjct: 694 HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSL 753

Query: 392 SKVVELLHRMDER 404
            K+VE    M  +
Sbjct: 754 DKMVESPAEMSSQ 766



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 199/411 (48%), Gaps = 27/411 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           AA  F +L A G  P++ T S L+  L   G   VA  +F EM +G         PD   
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-----TVAPDVHT 213

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I  LC+ G +D A  +L +++   I P VVTYN ++   C +    EA RL   M+
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V+P++VTF +++  L +  +  E   +L+ M   G+ PN  +YN ++   C  G  +
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  M S G K  V +Y+++    CK  E+E A  +  EML  G+    + + +LF
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGM----MVHCSLF 389

Query: 243 IGLFEIH-----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             +   H     +++   +L  EM    +  +       I  LCK+G   EA E++  + 
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                +++ + + LI GLC+   +K A ++  ++    +  D +TYNIMI   C   KMD
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM-----LGCIRNNETSKVVELLHRMDE 403
           +A  L  DM  +G  PD   FN  +     LG        KV E+LH +D+
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLG--------KVEEILHLLDQ 552



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 196/400 (49%), Gaps = 7/400 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  +L+  G +P V+TY+ L++ LC++G    A  L   M+ G        +P  V 
Sbjct: 230 AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR------VRPSIVT 283

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I GL +     +   +L +M+   I P+ V YN +I   C     +EA +LF EM+
Sbjct: 284 FGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMV 343

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-TGRV 181
            +G++  VVT+++I   LCK G+ME A ++L+ M+  G+  +  ++N+++      TGR+
Sbjct: 344 SKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRL 403

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    L   M +   K N    +  I   CK+ + E A  ++ ++L KG+   V T N L
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNAL 463

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL + + ++ A K+   M   GV  D   Y   I G CK   + EA++L   +     
Sbjct: 464 IHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGF 523

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +++  +   C  G+++    L   +    L  D+VTY  +I   C    M KA++
Sbjct: 524 KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              ++   G+ P+ V +N L+ G  RN   S  + +L  M
Sbjct: 584 YLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 162/349 (46%), Gaps = 41/349 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA ++ ++   G   NV T + LI+GLC+  +   A  + + M+N   E       D +
Sbjct: 440 EAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVEL------DRI 493

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK   +D+A +L   M  +   PD+ T+N  +  +C      E   L  +M
Sbjct: 494 TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM 553

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF------ 175
             +G++P++VT+  I+D  CK   M +A++ L  +++ G+RPNA +YN L+ G+      
Sbjct: 554 KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613

Query: 176 -----------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                        C  G V   K +F        +  V  Y+I+
Sbjct: 614 SDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTII 673

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK  +I+ A+  + EM S+GI P  +TY TL     +    E A KLFDEM   G+
Sbjct: 674 IQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGI 733

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
             D+ +Y T I G C+   + + +E    +     + D  SY+  +DG+
Sbjct: 734 VPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 134/278 (48%), Gaps = 6/278 (2%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNT 170
           + A   F+E+  +G  P++ T S++++ L   G+++ A ++  E+     V P+   Y  
Sbjct: 157 SRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTA 216

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++   C  G ++ A  +   +   G +  V +Y++L++  CK+  +E A  L   M+   
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           ++P++VT+  L  GL    Q      +  EMQ  G+  +   Y   I   C+ G+  EAL
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHA 349
           +LF  +     +  + +Y+ +   LCK G ++ A ++    L  G+++   +  +++   
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           L   G++D    L  +M A+ + P+    + LM  CI+
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPN----DALMTACIQ 430



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  A+F +      E  VI Y+ +I G C+ G    A+  F+EM +  G       P+ +
Sbjct: 650 EVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM-HSRG-----IPPNKM 703

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++    K G  ++A +L  +M    I PD V+YN++I GFC  +  ++      EM
Sbjct: 704 TYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEM 763

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEA 149
             Q ++ +  +++  +D +      +EA
Sbjct: 764 SSQVLKQDGCSYNAFVDGITTPWCQKEA 791


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 203/391 (51%), Gaps = 6/391 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PNV T + +I+ LC+      A ++FE M         VC PD   + ++IDG
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK------VCSPDGATFCSLIDG 349

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L K+G VD A  +  +M D +  P+VV Y S+IR F   +   +  +++ EMM  G  P+
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++  +  MD + K G+ E+   L E +   G  P+   Y+ L+      G      EL+ 
Sbjct: 410 LMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYY 469

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           +M+  GC  +  +Y+ +I+G+CK+ ++  A  L  EM + G  PTVVTY ++  GL +I 
Sbjct: 470 AMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKID 529

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E + +G+  +   Y + IDG  K G + EA  +   +       ++ +++
Sbjct: 530 RLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+DGL K+  +  A   F S+       + +TY I+I+ LC   K +KA   + +M+ +
Sbjct: 590 CLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQ 649

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           G+ P+ + +  ++ G  ++   ++   L  R
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFER 680



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 166/314 (52%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++KA G  P+  +YS LI+ L + G       L+  M +        C  D   Y 
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG------CVLDTRAYN 484

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDG CK G V+KA +LL +MK    +P VVTY SV+ G    +  +EA  LF E    
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN 544

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ N V +S ++D   K G+++EA  ++E M+Q G+ PN + +N L+DG      +N A
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +Y ILING CK ++   A   + EM  +G+KP  +TY  +  G
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   V +A  LF+  +  G   D+ +Y   I+GL      ++A +LF   R+  C + 
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIH 724

Query: 305 IRSYSCLIDGLCKS 318
            ++   L+D L K+
Sbjct: 725 TKTCVALLDALHKA 738



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 199/403 (49%), Gaps = 9/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  + +A GC P+V+ Y+ ++  L + G T  AL +FEEM            P+  
Sbjct: 219 EAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD-------AMPNLP 271

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II  LCK G V+ A ++   MK+  + P+V T N +I   C A   +EA  +F E 
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF-EG 330

Query: 122 MDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MD  V  P+  TF  ++D L K G++++A ++ E M+     PN  VY +L+  F    R
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDR 390

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
                +++  M   GC  ++   +  ++   K  E E   +L+ E+ ++G  P   +Y+ 
Sbjct: 391 KEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSI 450

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +       ++L+  M+  G   DT AY T IDG CK+G + +A +L   ++ + 
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +Y  ++DGL K  RL  A+ LF       +  + V Y+ +I      G++D+A+
Sbjct: 511 HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAY 570

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  +M  KG+ P+   +N L+ G ++  E ++ +     M +
Sbjct: 571 LVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKD 613



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 189/404 (46%), Gaps = 7/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   ++ F   P    Y+TLI  L   G +   L LF +M     E  V      
Sbjct: 43  IEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVH----- 97

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            + TT+I    +EG VD A  LL +MK    + D+V YN  I  F      + A + F E
Sbjct: 98  -LLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+ VT++ +M  LCK  +++EA ++ E M Q    P A+ YNT++ G+   G+
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L     + GC  +V +Y+ ++    K  + + AL ++ EM  +   P + TYN 
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNI 275

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L +   VE AFK+ D M+  G+  +       ID LCK   + EA  +F  +    
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  ++  LIDGL K GR+  A+ ++  +     I +VV Y  +I       + +  H
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++ +M   G +PD +  NT M    +  ET K   L   +  R
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKAR 439



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 6/324 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++   GC P+++  +T ++ + + G T     LFEE I   G       PD   Y+ 
Sbjct: 397 MYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE-IKARGFL-----PDTRSYSI 450

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  L K GF  +  EL   MKD+    D   YN+VI GFC +   N+A +L  EM   G
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             P VVT+  ++D L K  +++EA  L E     G+  N  +Y++L+DGF   GRV+ A 
Sbjct: 511 HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAY 570

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   M   G   NV++++ L++G  K +EI  AL  +  M      P  +TY  L  GL
Sbjct: 571 LVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGL 630

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++ +  +AF  + EMQ+ G+  +T  Y   I GL K+G + +A  LF   R      D 
Sbjct: 631 CKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDS 690

Query: 306 RSYSCLIDGLCKSGRLKIAWELFH 329
            SY+ +I+GL  + R   A++LF 
Sbjct: 691 ASYNAMIEGLSIANRALDAYQLFE 714



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 6/281 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L+  +K  GC  +   Y+T+I+G C++G    A  L EEM            P  V
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH------PTVV 516

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++DGL K   +D+A  L  + K   I  + V Y+S+I GF      +EA  +  EM
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV T++ ++D L K  ++ EA    + M  +   PN   Y  L++G C   + 
Sbjct: 577 MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKF 636

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A   +  M+  G K N  +Y+ +I+G  K+  +  A SL+    + G  P   +YN +
Sbjct: 637 NKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAM 696

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             GL   ++   A++LF+E +  G +  T      +D L K
Sbjct: 697 IEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHK 737



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 1/326 (0%)

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D  +++L +M      P   T   ++     +    EA  L   M     +P    ++ +
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L + G+ +    L   M ++G   N  +  TL+  F   GRV+ A  L   M+S   
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             ++  Y++ I+ + K  +++ A   + EM + G+ P  VTY ++   L + ++++ A +
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           +F++M+++      +AY T I G    G   EA  L    R   C   + +Y+C++  L 
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G+   A  +F  + R  +  ++ TYNI+I  LC  G ++ A  +   M+  G+ P+  
Sbjct: 248 KKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMD 402
             N ++    +  +  +   +   MD
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMD 332



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 79/179 (44%)

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM   G  PT  T   L     +  ++  AF L   M+         AY T I  L + G
Sbjct: 16  EMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVG 75

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
                L LF  ++ L  E+++   + LI    + GR+  A  L   +      AD+V YN
Sbjct: 76  ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYN 135

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + I      GK+D A   F +M+A G+ PD V + ++M    + N   + VE+  +M++
Sbjct: 136 VCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQ 194


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 192/370 (51%), Gaps = 12/370 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCK 72
           G  P+  T+++LI G CRT    VA +LF++M + G  +       DAV Y  +I+G C+
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQ-------DAVSYAALIEGFCE 211

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G VD+A EL  +++     PD+ T+ ++++G C A    E   +  +M + G +P    
Sbjct: 212 TGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRA 267

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D  C+  K EEA ++L  M   G+ P A     +++ +C  GR++ A  +F SM+
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC+ NV++Y+ ++ G+C   ++  A++L  +M   G++P VVTYN L  G      +E
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+L   M+ +G+AAD + Y   ID LCK G + EA  LF  L       +  +++ +I
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCK G+  +A      +       D  TY+  I  LC      +      +M  K V 
Sbjct: 448 NGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVK 507

Query: 373 PDCVAFNTLM 382
           P  V +  ++
Sbjct: 508 PSTVNYTIVI 517



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 208/424 (49%), Gaps = 25/424 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE-----------MING--- 48
           A  LF K+   G   + ++Y+ LI G C TG    AL LF E           ++ G   
Sbjct: 183 AQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCD 242

Query: 49  --NGEFGVV---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
              GE G+           +P    Y  ++D  C+E   ++A+++L +M D  + P  VT
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
             +V+  +C     + A R+F  M  +G +PNV T++ ++   C  GK+ +A  LL+ M 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV P+   YN L+ G C+ G +  A  L   ME  G   + ++Y++LI+  CK  +++
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  +  +GI+P  VT+NT+  GL +  + + A    ++M   G A DT+ Y  FI
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LCK     E L     +     +    +Y+ +ID L K     +A  ++  +      
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVVTY   + A C +G++ +A ++ ++M+  G+  D +A+NTL+ G     +T   V +
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTI 602

Query: 398 LHRM 401
           L  M
Sbjct: 603 LKHM 606



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 177/366 (48%), Gaps = 10/366 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P   TY+ LI  LCR      A      M+          +PDA  + ++I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGW------RPDAFTFNSLILGYCRTQQL 180

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A++L  +M  +  + D V+Y ++I GFC     +EA  LF E+     QP++ T + +
Sbjct: 181 DVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAAL 236

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC   + EE   +L+ M ++G RP    Y  L+D +C   +   A+++   M   G 
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                + + ++N YC+   + GA+ ++  M  KG +P V TYN +  G   + +V +A  
Sbjct: 297 VPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D+M+  GV  D   Y   I G C +G+I  A  L R +       D  +Y+ LID LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G++  A  LF  L    +  + VT+N +I+ LC  GK D A      M + G APD  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 377 AFNTLM 382
            ++  +
Sbjct: 477 TYSPFI 482



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 179/377 (47%), Gaps = 6/377 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +  K+K  G  P    Y+ L++  CR      A  +  EM +     G+V  P AV
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDN----GLV--PCAV 301

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +++  C+EG +  A  +   MK K   P+V TYN++++GFC      +A  L  +M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+P+VVT+++++   C +G +E A +LL LM   G+  + + YN L+D  C TG+V
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  +E  G + N  +++ +ING CK  + + A +   +M+S G  P   TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +           DEM +  V   T  Y   ID L K      A  ++  +  L C
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+  +   C  GRL  A  +   + +G +I D + YN +I    + GK D A  
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601

Query: 362 LFLDMEAKGVAPDCVAF 378
           +   M      P+   F
Sbjct: 602 ILKHMTGVASMPNHFTF 618



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 193/436 (44%), Gaps = 53/436 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---------- 51
           +A AL  +++  G EP+V+TY+ LI G C  GH   A  L   ++ GNG           
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR-LMEGNGLAADQYTYNVL 411

Query: 52  FGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
              +CK                    P++V + T+I+GLCK G  D A   L +M     
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD  TY+  I   C    S E      EM+ + V+P+ V +++++D L K      A++
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +   M+ +G  P+   Y T +  +C  GR++ A+ + + M+  G   +  +Y+ LI+G+ 
Sbjct: 532 IWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI-------------------GLFEIHQVE 252
              + + A+++   M      P   T+   FI                    +++  ++ 
Sbjct: 592 SIGKTDHAVTILKHMTGVASMPNHFTF---FILLRHLLQRRLAEDVPLKTTSVWKTIELA 648

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
             F+LF+ M+++ V +   AY   ++G  +   + E   L   ++     L+   Y+ L+
Sbjct: 649 DVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLV 708

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +  CK      AW L  S+     + ++++Y  ++    A+G+ D+A ++F  +  K   
Sbjct: 709 NCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768

Query: 373 PDCVAFNTLMLGCIRN 388
            D + +  ++ G IR 
Sbjct: 769 TDEIVWKIIIDGLIRQ 784



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 184/492 (37%), Gaps = 127/492 (25%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  +K  GCEPNV TY+ ++ G C  G    A+ L ++M     E GV  +PD V 
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM----RECGV--EPDVVT 372

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I G C +G ++ A  LL  M+   +  D  TYN +I   C     +EA  LF  + 
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT---- 178
            +G++PN VTF+ +++ LCK GK + A   LE M+  G  P+ + Y+  ++  C T    
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 179 ----------------GRVNR---------------AKELFVSMESMGCKHNVFSYSILI 207
                             VN                A  ++  M S+GC  +V +Y+  +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA------------- 254
             YC    +  A ++  EM   GI    + YNTL  G   I + + A             
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 255 --------------------------------------FKLFDEMQRHGVAADTWAYRTF 276
                                                 F+LF+ M+++ V +   AY   
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 277 IDGLCKNGYIVEALELFRTLR-------------ILKCELDIR----------------- 306
           ++G  +   + E   L   ++             ++ C   +R                 
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGF 732

Query: 307 -----SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                SY  L+ G    G+   A E+F  L       D + + I+I  L   G  D  HD
Sbjct: 733 LPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHD 792

Query: 362 LFLDMEAKGVAP 373
           +   +E     P
Sbjct: 793 MISILEQMKCKP 804



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 147/364 (40%), Gaps = 57/364 (15%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     K+ + GC P+  TYS  I  LC+T  +   L+  +EM+  +       KP  V 
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD------VKPSTVN 512

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +ID L KE     A  +  QM     +PDVVTY + +R +C     +EA+ + +EM 
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV--------------- 167
             G+  + + ++ ++D     GK + A  +L+ M  +   PN F                
Sbjct: 573 KGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAE 632

Query: 168 ------------------------------------YNTLMDGFCLTGRVNRAKELFVSM 191
                                               Y  +++GF    R++    L   M
Sbjct: 633 DVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHM 692

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           +      N   Y+ L+N +CK +    A +L   M+  G  P +++Y  L  G     Q 
Sbjct: 693 KEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQA 752

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           +RA ++F  ++      D   ++  IDGL + G+     ++   L  +KC+    +Y+ L
Sbjct: 753 DRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812

Query: 312 IDGL 315
            + L
Sbjct: 813 TEEL 816


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 198/382 (51%), Gaps = 6/382 (1%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ++ S +++G C++G    A  L +E+          C      Y +++D   ++   D  
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC------YNSLLDSYTRQRNDDAV 202

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             LL +M+++ + P V TY  ++ G   A D ++ + ++ EM  + V  +V  +S +++ 
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            C+ G +  AS++ +  +  GV PN   Y  L++GFC  G++  A+ L   M+  G  HN
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
              ++ +I+GYC++  +E AL + + M   GI+  + TYNTL  GL  ++++E A KL  
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M   GVA +  +Y T I    K G +VEA  LFR +        + +Y+ +IDG  K+G
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNG 442

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            ++ A      + +  L+ D+ TY  ++H  C +GK+D A  LF +M+ +G  P+ VA+ 
Sbjct: 443 SIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYT 502

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            L+ G  +   + +  +L   M
Sbjct: 503 ALVSGLAKEGRSEEAFQLYDDM 524



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 14/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +L   G   N   Y++L++   R  +      L +EM N   E      P   
Sbjct: 166 DAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVE------PTVG 219

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGL + G + K + +  +MK KN+  DV  Y++VI  +C   +   A  +F E 
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PN  T+  +++  CK G++E A  LL  M   GV  N  V+NT++DG+C  G V
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMV 339

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+   ME MG + ++++Y+ L  G C+   +E A  L   M  KG+ P  V+Y TL
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTL 399

Query: 242 FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                 IH  E     A +LF +M+  G       Y   IDG  KNG I EA    + + 
Sbjct: 400 I----SIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DI +Y+ L+ G C +G++ +A  LF  +       +VV Y  ++  L  +G+ +
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A  L+ DM A G+ PD   ++ L+
Sbjct: 516 EAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 183/354 (51%), Gaps = 6/354 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A L  +++  G EP V TY+ L++GL R G       +++EM   N         D   Y
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKN------VAGDVYFY 256

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + +I+  C+ G V +A E+  +     + P+  TY ++I GFC       A+ L  +M  
Sbjct: 257 SAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQL 316

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV  N + F+ ++D  C++G +E+A ++  +M ++G+  + + YNTL  G C   R+  
Sbjct: 317 RGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMED 376

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK+L   M   G   N  SY+ LI+ + K  ++  A  L+ +M  KG +P+VVTYN +  
Sbjct: 377 AKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 436

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   +  A +   EM++ G+  D + Y   + G C NG +  AL LF  ++    + 
Sbjct: 437 GYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKP 496

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++ +Y+ L+ GL K GR + A++L+  +    L  D   Y++++ +L  D + D
Sbjct: 497 NVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 153/305 (50%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           V+ GFC +   ++A  L  E+   GV  N   ++ ++D   +    +  + LL+ M   G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V P    Y  L+DG    G +++ + ++  M+      +V+ YS +IN YC+   +  A 
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++ E +  G++P   TY  L  G  +I Q+E A  L  +MQ  GV  +   + T IDG 
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C++G + +ALE+   +  +  ELDI +Y+ L  GLC+  R++ A +L H +    +  + 
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V+Y  +I     +G M +A  LF DME KG  P  V +N ++ G I+N    +       
Sbjct: 394 VSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKE 453

Query: 401 MDERN 405
           M+++ 
Sbjct: 454 MEKKG 458



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 166/342 (48%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + ++DG CK G VD A  LL ++    +  +   YNS++  +    + +    L  EM +
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV+P V T+++++D L + G + +   + + M +  V  + + Y+ +++ +C  G V R
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A E+F      G + N  +Y  LING+CK  +IE A  L ++M  +G+    + +NT+  
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMID 331

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G      VE+A ++   M++ G+  D + Y T   GLC+   + +A +L   +       
Sbjct: 332 GYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP 391

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  SY+ LI    K G +  A  LF  +        VVTYN+MI     +G + +A    
Sbjct: 392 NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFK 451

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +ME KG+ PD   +  L+ G   N +    + L   M  R 
Sbjct: 452 KEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRG 493



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  ++  G  P+V+TY+ +I+G  + G    A    +EM     + G+V  PD 
Sbjct: 410 VEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEM----EKKGLV--PDI 463

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G C  G VD A  L  +MK +   P+VV Y +++ G      S EA +L+ +
Sbjct: 464 YTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDD 523

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKME 147
           M+  G+ P+   +SV++  L  + + +
Sbjct: 524 MLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 5/193 (2%)

Query: 218 GALSLYSEMLSKGIK--PTVVT---YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           G L   +++L K I   P  VT    + +  G  +   V+ A  L DE+ RHGV  +   
Sbjct: 126 GQLPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC 185

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y + +D   +         L + +     E  + +Y+ L+DGL ++G +     ++  + 
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R  +  DV  Y+ +I+A C  G + +A ++F +    GV P+   +  L+ G  +  +  
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 393 KVVELLHRMDERN 405
               LL  M  R 
Sbjct: 306 AAEMLLADMQLRG 318


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 194/387 (50%), Gaps = 6/387 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P + TY  +INGLC+    + A  +F ++ +          PD V+YTT+I GLC+ G  
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG------YAPDRVMYTTMIHGLCEMGSF 349

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A++L  +M DK + P+  TYN+++ G   + D   A  L+ EM ++G     VT + I
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + ELC  GK +EA ++ + M + G++ +A  YN+L+ GFC  G+V+    L   + +   
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDP 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           + +V  Y +LI   CK+ + E A  L  +M SKG+ P   TY+T+  G  +    E   +
Sbjct: 470 QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L++E    G    T      I  LC  G   EA E+F+ +     + D  +Y+ LI G C
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFC 589

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G++  +  L + L    L     +Y  +I  LC +G  + A  L+ DM +KG+ P   
Sbjct: 590 KEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHAN 649

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDE 403
               L+ G  +    ++ ++ L  M E
Sbjct: 650 LREHLISGLCKQGRATEGMDRLMGMLE 676



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 194/435 (44%), Gaps = 39/435 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ +LK  G   +++  +++++G  + G T +    ++EMI      G     +  
Sbjct: 174 EAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKA----GTASDANTE 229

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +I   C  G V +  ELL Q     ++P   TYN +I GFC A +      +   M
Sbjct: 230 TVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTM 289

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P + T+  I++ LCKN +  EA ++   +   G  P+  +Y T++ G C  G  
Sbjct: 290 IARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSF 349

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++L+  M   G + N ++Y+ +++G  K+ + E A  LY+EM +KG   T VT N +
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    + + AF++F +M   G+ AD   Y + I G CK G + E + L   L     
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDP 469

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA------------ 349
           +  +  Y  LI   CK G  + A  L   +    L  +  TY+ M+H             
Sbjct: 470 QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529

Query: 350 -----------------------LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                                  LC+ GK D+A ++F  M   G+  D + +N+L+ G  
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFC 589

Query: 387 RNNETSKVVELLHRM 401
           +  +  K + LL+ +
Sbjct: 590 KEGKVGKSMNLLNEL 604



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 6/381 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F  LK  G  P+ + Y+T+I+GLC  G    A  L+ EM++         +P+A
Sbjct: 315 LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKG------MQPNA 368

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ G  K G  ++A EL  +M +K      VT N +I   C    S+EA  +F +
Sbjct: 369 YTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKK 428

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+Q + +T++ ++   CK GK++E   LL  ++    +P+  +Y  L+   C  G 
Sbjct: 429 MSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGD 488

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              AK L   M S G   N ++Y  +++G  K+ + E    LY+E  +KG   T  T N 
Sbjct: 489 FEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNK 548

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   L    + + A ++F +M   G+ AD   Y + I G CK G + +++ L   L    
Sbjct: 549 IISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +    SY+ LI  LC++G  + A  L+  +    +         +I  LC  G+  +  
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGM 668

Query: 361 DLFLDMEAKGVAPDCVAFNTL 381
           D  + M    + P   AF  L
Sbjct: 669 DRLMGMLENKIKPKKAAFEDL 689



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 2/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD+      +  LC  GF+++A E+  Q+K+  I   +V  NS++ G   A  +      
Sbjct: 154 PDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEF 213

Query: 118 FIEMMDQGV--QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           + EM+  G     N  T   ++   C +G++    +LL   ++ G+ P    YN L+ GF
Sbjct: 214 YQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGF 273

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C         E+  +M +      +++Y  +ING CKN+E   A  +++++  +G  P  
Sbjct: 274 CQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDR 333

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V Y T+  GL E+     A KL+ EM   G+  + + Y T + G  K+G    A EL+  
Sbjct: 334 VMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNE 393

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +          + + +I  LC  G+   A+E+F  +    + AD +TYN +I   C +GK
Sbjct: 394 MCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGK 453

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D+  +L  ++ A+   P    +  L++   ++ +      LL  M  +
Sbjct: 454 VDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSK 502



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 37/314 (11%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG---------- 174
           G  P+  +    +  LC  G +EEA ++   + + G+R +    N+++ G          
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 175 ---------------------------FCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                                      FC +G+V R  EL       G      +Y+ LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G+C+ K       +   M+++   PT+ TY  +  GL +  +   A+++F++++  G A
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D   Y T I GLC+ G   EA +L+  +     + +  +Y+ ++ G  KSG  + A EL
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           ++ +         VT N +I  LC+ GK D+A ++F  M   G+  D + +N+L+ G  +
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 388 NNETSKVVELLHRM 401
             +  + + LL+ +
Sbjct: 451 EGKVDERMNLLNEL 464



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 29/200 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVC----- 56
           A  L   + + G  PN  TY T+++G  ++G       L+ E  N G G     C     
Sbjct: 492 AKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIIS 551

Query: 57  -----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                  K DA+ Y ++I G CKEG V K+  LL ++  + + P
Sbjct: 552 ELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQP 611

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
              +Y S+I   C   D+  AKRL+ +M+ +G++P+      ++  LCK G+  E    L
Sbjct: 612 SASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRL 671

Query: 154 ELMIQIGVRPNAFVYNTLMD 173
             M++  ++P    +  L +
Sbjct: 672 MGMLENKIKPKKAAFEDLAE 691



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++ N LF  L +   V RA K+  ++   G   D+ +   ++  LC  G+I EA+E+
Sbjct: 122 PDPISSNMLFEALLDAKAV-RAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAIEV 178

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI--MIHAL 350
           +  L+     + I + + ++ G  K+G+ ++ +E +  + +    +D  T  +  +I A 
Sbjct: 179 YFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAF 238

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           C  G++ + ++L       G+ P    +N L+ G  +    + + E+LH M  RN
Sbjct: 239 CDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 206/396 (52%), Gaps = 19/396 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F K+K FGC+P+V TY+++++ + +    ++AL ++ +M+  N        P+  
Sbjct: 149 KAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY------NPNRA 202

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++GLCK G  D A ++  +M  K I P+ + Y  ++ G C A  +++  RL   M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ +T + ++D  CK G+++EA  LL+L  + G       Y++L+DG     R 
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  +E    M   G + +V  Y+ILI G+C+   ++ AL++ ++M  +G+ P    YN L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +++A  L  E+ ++     +  Y   I G+C+NG + EA ++F  +  L C
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-------------LIADVVTYNIMIH 348
              I +++ LIDGLCK+G L+ A  LF+ +  G               + D  +   M+ 
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVE 502

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            LC  G + KA+ L + +   GV PD + +N L+ G
Sbjct: 503 RLCESGLILKAYKLLMQLADSGVVPDIMTYNVLING 538



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 208/446 (46%), Gaps = 60/446 (13%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A++ ++      PN  T+  L+NGLC+ G T  AL +F+EM       G+   P+ +I
Sbjct: 185 ALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK----GI--PPNTMI 238

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI--- 119
           YT I+ GLC+    D    LL  MK     PD +T N+++ GFC     +EA  L     
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 120 --------------------------------EMMDQGVQPNVVTFSVIMDELCKNGKME 147
                                           +M   G++P+VV +++++   C+ G ++
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
            A  +L  M Q G+ P+ + YN L+ GFC  G +++A+ L + +    C     +Y+ILI
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILI 418

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM------ 261
            G C+N  ++ A  ++++M + G  P+++T+N L  GL +  ++E A  LF +M      
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNP 478

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
                  Q      DT + +T ++ LC++G I++A +L   L       DI +Y+ LI+G
Sbjct: 479 SLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLING 538

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF--LDMEAK-GV 371
            CK+  +  A++LF  L       D VTY  +I       ++D+  D F  LD   K G 
Sbjct: 539 FCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF---HRVDREEDAFRVLDQMVKNGC 595

Query: 372 APDCVAFNTLMLGCIRNNETSKVVEL 397
            P    +  LM    R  + S    L
Sbjct: 596 TPSSAVYKCLMTWSCRKGKLSVAFSL 621



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 203/445 (45%), Gaps = 82/445 (18%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------INGNGEFG 53
           K+   G EP+V+ Y+ LI G C  G    ALN+  +M               I G  + G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390

Query: 54  VV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYN 99
           ++              C P +  YT +I G+C+ G +D+A+++  QM++   +P ++T+N
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 100 SVIRGFCYANDSNEAKRLFIEM-----------MDQGVQP--NVVTFSVIMDELCKNGKM 146
           ++I G C A +  EA+ LF +M           + QG     +  +   +++ LC++G +
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A +LL  +   GV P+   YN L++GFC    +N A +LF  ++  G   +  +Y  L
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL--------------------- 245
           I+G+ +    E A  +  +M+  G  P+   Y  L                         
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLP 630

Query: 246 -------------FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
                        FE  ++E+A +   EM       +   Y  ++ GLC+     EAL++
Sbjct: 631 SQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI 690

Query: 293 FRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHA 349
           F  L+  +C++D+   SC  LI+GLCK G L++A ++F ++L +G ++   +  N ++ +
Sbjct: 691 FLVLK--ECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC-NQLLRS 747

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPD 374
           L    KM  A DL   M + G   D
Sbjct: 748 LILQDKMKHALDLLNRMNSAGYDLD 772



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEF------GV 54
           EA  +F +++  GC P+++T++ LI+GLC+ G    A +LF +M I  N         G 
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
               D     T+++ LC+ G + KA +LL+Q+ D  + PD++TYN +I GFC A + N A
Sbjct: 489 DRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGA 548

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            +LF E+  +G  P+ VT+  ++D   +  + E+A ++L+ M++ G  P++ VY  LM  
Sbjct: 549 FKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608

Query: 175 FCLTGRVNRAKELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C  G+++ A  L++  + S+  + +      L   + +  E+E A+    EM  K    
Sbjct: 609 SCRKGKLSVAFSLWLKYLRSLPSQED--ETLKLAEEHFEKGELEKAVRCLLEMNFKLNNF 666

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            +  Y    IGL +  + E A K+F  ++   +  +  +    I+GLCK+G +  A+++F
Sbjct: 667 EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 158/342 (46%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +ID L K+   D   ++L ++K+ NI     T++ +I  +  +  + +A   F +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G +P+V T++ I+  + +      A  +   M+++   PN   +  L++G C  G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A ++F  M   G   N   Y+I+++G C+ K  +    L + M   G  P  +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ Q++ AF L    ++ G       Y + IDGL +     E  E  R +    
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E D+  Y+ LI G C+ G +  A  + + + +  L  D   YN +I   C  G +DKA 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            L L++      P    +  L+ G  RN    +  ++ ++M+
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 35/304 (11%)

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           R FI    +    + VT ++++D L K+   +   ++LE +    ++     ++ L+  +
Sbjct: 82  RFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAY 141

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
             +G   +A E F  M+  GCK +VF+Y+ +++   + +    AL++Y++ML     P  
Sbjct: 142 AKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNR 201

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            T+  L  GL +  + + A K+FDEM + G+  +T  Y   + GLC+     +   L  T
Sbjct: 202 ATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNT 261

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWEL---------------FHSLPRGVLIA-- 338
           +++  C  D  + + L+DG CK G++  A+ L               + SL  G+  A  
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321

Query: 339 ------------------DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
                             DVV Y I+I   C  G +D A ++  DM  +G++PD   +N 
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381

Query: 381 LMLG 384
           L+ G
Sbjct: 382 LIKG 385



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 40/227 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +L+  G  P+ +TY TLI+G  R      A  + ++M+  NG     C P + +
Sbjct: 548 AFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK-NG-----CTPSSAV 601

Query: 63  YTTIIDGLCKEGFV----------------------------------DKAKELLLQMKD 88
           Y  ++   C++G +                                  +KA   LL+M  
Sbjct: 602 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 661

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           K  N ++  Y   + G C A  S EA ++F+ + +  +  N  +  ++++ LCK+G +E 
Sbjct: 662 KLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEM 721

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           A  +    ++ G      + N L+    L  ++  A +L   M S G
Sbjct: 722 AVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 768


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 207/382 (54%), Gaps = 9/382 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A   + ++   G  PNV T++ L+N LC+ G    A  +F+E I   G      +P A
Sbjct: 214 MVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDE-IRKTG-----LQPTA 267

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V + T+I+G CK G +++   L + M++  + PDV TY+++I G C      +A  LF E
Sbjct: 268 VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE 327

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ PN VTF+ +++  CKNG+++ A ++ + M   G++ +  +YNTL+DG C  G 
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A++    M   G   + F+Y+ L++G CK  ++E AL +  EM+ +GI+   V +  
Sbjct: 388 FREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTA 447

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL    ++  A +   EM R G+  D   Y   +DG CK G +    +L + ++   
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +Y+ L++GLCK G++K A  L +++    ++ D +TYNI++   C  GK+    
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ 567

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           ++  +M   G+  D  ++ +L+
Sbjct: 568 NVKTEM---GLVSDYASYRSLL 586



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 192/360 (53%), Gaps = 6/360 (1%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           L+  + +    +VAL  + E+++          P+   +  +++ LCKEG V  A+ +  
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSG------YPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +++   + P  V++N++I G+C + +  E  RL + M +  V P+V T+S ++D LCK  
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++E+A+ L + M   G+ PN   + TL++G C  GRV+ A E++  M + G K ++  Y+
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G CK      A     EM  +G+ P   TY TL  G  +   +E A ++  EM + 
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  D  A+   I GLC++G IV+A    R +     + D  +Y+ ++DG CK G +K+ 
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++L   +     I  V+TYN++++ LC  G++  A  L   M   GV PD + +N L+ G
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 167/323 (51%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A E  L++ D    P+V T+N ++   C      +A+ +F E+   G+QP  V+F+ +++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
             CK+G +EE  +L  +M +  V P+ F Y+ L+DG C   ++  A  LF  M   G   
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N  +++ LING CKN  ++ AL +Y +M +KG+K  +V YNTL  GL +      A K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM + G+  D + Y T +DG CK G +  ALE+ + +     +LD  +++ +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G++  A      + R  L  D  TY +++   C  G +     L  +M++ G  P  + +
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 379 NTLMLGCIRNNETSKVVELLHRM 401
           N LM G  +  +      LL+ M
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAM 538



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 181/354 (51%), Gaps = 9/354 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G +P  ++++TLING C++G+      L   M     EF V   PD  
Sbjct: 250 DAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM----EEFRVF--PDVF 303

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDGLCKE  ++ A  L  +M D+ + P+ VT+ ++I G C     + A  ++ +M
Sbjct: 304 TYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQM 363

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ ++V ++ ++D LCK G   EA + +  M + G+ P+ F Y TL+DG C  G +
Sbjct: 364 FTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDL 423

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M   G + +  +++ +I+G C++ +I  A     EML  G+KP   TY  +
Sbjct: 424 ELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMV 483

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 484 MDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGV 543

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
             D  +Y+ L+ G CK G+L     +   +    L++D  +Y  ++H L    K
Sbjct: 544 VPDDITYNILLQGHCKHGKLGDFQNVKTEMG---LVSDYASYRSLLHELSKASK 594



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 145 KMEEASQLLELMIQI---GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           KM      LE  ++I   G  PN + +N LM+  C  G+V  A+ +F  +   G +    
Sbjct: 209 KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAV 268

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           S++ LINGYCK+  +E    L   M    + P V TY+ L  GL +  Q+E A  LF EM
Sbjct: 269 SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEM 328

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              G+  +   + T I+G CKNG +  ALE+++ +     + D+  Y+ LIDGLCK G  
Sbjct: 329 CDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYF 388

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A +    + +  LI D  TY  ++   C +G ++ A ++  +M  +G+  D VAF  +
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448

Query: 382 MLGCIRNNETSKVVELLHRM 401
           + G  R+ +       L  M
Sbjct: 449 ISGLCRDGKIVDAERTLREM 468



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 129/265 (48%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           + + GK   +S    ++   G   ++FV++ LM  +   G V+ A + F   +    K  
Sbjct: 137 VSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIP 196

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
                 L+    K      AL  Y E+L  G  P V T+N L   L +  +V+ A  +FD
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           E+++ G+     ++ T I+G CK+G + E   L   +   +   D+ +YS LIDGLCK  
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           +L+ A  LF  +    L+ + VT+  +I+  C +G++D A +++  M  KG+  D V +N
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  +     +  + +  M +R
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKR 401


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 192/406 (47%), Gaps = 32/406 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI------VALNLFEEMINGNGEFGVVC 56
           A  L  ++   GC P  + Y+  I  +C            +A  ++ EM+  N      C
Sbjct: 365 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN------C 418

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + V        LC  G  DKA +L+ +M  K   PD  TY+ VI   C+A    +A  
Sbjct: 419 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 478

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A  L E M  +G  P    Y  L+  + 
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------ 230
              +V +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++         
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 598

Query: 231 ----------IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                     + P VVTY  L  GL + H+V+ A +L D M   G   +   Y   IDG 
Sbjct: 599 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  L++ KC     + +Y+ LID + K GRL +A ++   + +     
Sbjct: 659 CKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 716

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +VVTY  MI  LC  G+ +KA  L   ME KG +P+ V +  L+ G
Sbjct: 717 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 28/414 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN   +++L++  C       A  L   M          C P  V+Y   I  +C +
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 394

Query: 74  ------GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D A+++  +M   N   + V   +  R  C     ++A +L  EMM +G  
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P  VTY  L  GL +
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    CE +   Y  LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            DG++D A  +   M      P+ V +  ++ G  R  E+ K ++LL  M+E+ 
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 748



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G  P+  TYS +I  LC       A  LF+EM       GV   PD  
Sbjct: 440 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM----KMVGVT--PDVY 493

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +ID  CK G +++A+ L  +M+    +P VVTY ++I  +  A    +A  +F  M
Sbjct: 494 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 553

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG----------------VRPNA 165
           +D G +PN VT+  ++D LCK G + +A ++   +I                   + PN 
Sbjct: 554 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 613

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  L+DG C   +V+ A EL  +M S GC+ N   Y  LI+G+CK  +I+ A  ++ +
Sbjct: 614 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 673

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G  P+V TY +L   +F+  +++ A K+  +M +     +   Y   IDGLC+ G 
Sbjct: 674 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 733

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             +AL+L   +    C  ++ +Y+ LIDGL +S
Sbjct: 734 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 196/483 (40%), Gaps = 83/483 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC-- 56
           EA     +LK FG  P+ +TY+ L+  L   G   +   + +EM         F V C  
Sbjct: 192 EALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFA 251

Query: 57  ---------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
                                K D V+ T +I GL +  + D+A   L +M+  +  P+V
Sbjct: 252 HALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 311

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VTY +++ GF         KR+   MM +G  PN   F+ ++   C       A +LL  
Sbjct: 312 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 371

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKELFVSMESMGCKHNVFSYSILING 209
           M   G  P   VYN  +   C   +      ++ A++++  M +  C  N  + +     
Sbjct: 372 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 431

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C   + + A  L  EM+ KG  P   TY+ +   L    +VE+AF LF EM+  GV  D
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI----------------- 312
            + Y   ID  CK G I +A  LF  +R + C   + +Y+ LI                 
Sbjct: 492 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 313 ------------------DGLCKSGRLKIAWELFHSL----------------PRGVLIA 338
                             DGLCK+G +  A+E++  L                 R  L  
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  ++  LC   K+D AH+L   M + G  P+ + ++ L+ G  +  +     E+ 
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671

Query: 399 HRM 401
            +M
Sbjct: 672 LQM 674



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 160/405 (39%), Gaps = 75/405 (18%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G  ++A E L ++KD    P  VTYN++++    A   +   R+  EM + G   + 
Sbjct: 185 CRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDR 244

Query: 131 VTFSVIMDELCKNGK--------------------------------MEEASQLLELMIQ 158
            T       LCK G+                                 +EA   L  M  
Sbjct: 245 FTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 304

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               PN   Y TL+ GF    ++   K +   M + GC  N   ++ L++ YC  K+   
Sbjct: 305 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 364

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIG---------------------------------- 244
           A  L + M + G  P  V YN +FIG                                  
Sbjct: 365 AYKLLNRMTTCGCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 423

Query: 245 --------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
                   L  + + ++AF+L  EM R G   DT  Y   I  LC    + +A  LF+ +
Sbjct: 424 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 483

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +++    D+ +Y+ LID  CK+G ++ A  LF  +        VVTY  +IHA     ++
Sbjct: 484 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 543

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +A+D+F  M   G  P+ V +  L+ G  +    SK  E+  ++
Sbjct: 544 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 13/249 (5%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-----ESMGCKHNVFSYSILINGYCK 212
           Q+G       Y+ L D     GR   A+ L   +     E +G   NV     L+   C+
Sbjct: 132 QVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNV-----LVRRCCR 186

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                 AL     +   G +P+ VTYN L   L    QV+  F++  EM   G   D + 
Sbjct: 187 GGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT 246

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
              F   LCK G   +AL++         +LD    + +I GL ++     A    H + 
Sbjct: 247 VGCFAHALCKEGRWADALDMIEREDF---KLDTVLCTHMISGLMEASYFDEAMSFLHRMR 303

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               I +VVTY  ++       ++     +   M  +G  P+   FN+L+       + +
Sbjct: 304 CNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYA 363

Query: 393 KVVELLHRM 401
              +LL+RM
Sbjct: 364 YAYKLLNRM 372


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 199/397 (50%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF  + A G  P    Y++LI G CR  +      L  EM   N    +V  P   
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN----IVISP--Y 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G+C  G +D A  ++ +M      P+VV Y ++I+ F   +   +A R+  EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+ P++  ++ ++  L K  +M+EA   L  M++ G++PNAF Y   + G+      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +    M   G   N    + LIN YCK +++  A S Y  M+ +GI     TY  L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +V+ A ++F EM+  G+A D ++Y   I+G  K G + +A  +F  +     
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++  Y+ L+ G C+SG ++ A EL   +    L  + VTY  +I   C  G + +A  
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           LF +M+ KG+ PD   + TL+ GC R N+  + + + 
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 202/437 (46%), Gaps = 79/437 (18%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           TY T++ G+C +G    A N+ +EMI         C+P+ VIYTT+I    +      A 
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASG------CRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV----- 135
            +L +MK++ I PD+  YNS+I G   A   +EA+   +EM++ G++PN  T+       
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 136 ------------------------------IMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                                         +++E CK  K+ EA      M+  G+  +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  LM+G     +V+ A+E+F  M   G   +VFSY +LING+ K   ++ A S++ E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ +G+ P V+ YN L  G     ++E+A +L DEM   G+  +   Y T IDG CK+G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF---------HSLPRGVL 336
           + EA  LF  +++     D   Y+ L+DG C+   ++ A  +F          + P   L
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772

Query: 337 IADV-----------------------------VTYNIMIHALCADGKMDKAHDLFLDME 367
           I  V                             VTYNIMI  LC +G ++ A +LF  M+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 368 AKGVAPDCVAFNTLMLG 384
              + P  + + +L+ G
Sbjct: 833 NANLMPTVITYTSLLNG 849



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 217/467 (46%), Gaps = 79/467 (16%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC 71
           A GC PNV+ Y+TLI    +      A+ + +EM     E G+   PD   Y ++I GL 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIA--PDIFCYNSLIIGLS 498

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           K   +D+A+  L++M +  + P+  TY + I G+  A++   A +   EM + GV PN V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 132 -----------------------------------TFSVIMDELCKNGKMEEASQLLELM 156
                                              T++V+M+ L KN K+++A ++   M
Sbjct: 559 LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ F Y  L++GF   G + +A  +F  M   G   NV  Y++L+ G+C++ EI
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  L  EM  KG+ P  VTY T+  G  +   +  AF+LFDEM+  G+  D++ Y T 
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 277 IDGLCKNGYIVEALELFRT-------------------LRILKCELDIR----------- 306
           +DG C+   +  A+ +F T                    +  K EL              
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 307 --------SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ +ID LCK G L+ A ELFH +    L+  V+TY  +++     G+  +
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              +F +  A G+ PD + ++ ++   ++   T+K + L+ +M  +N
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 192/371 (51%), Gaps = 13/371 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +++  G  PN +  + LIN  C+    I A + +  M++  G  G     DA  YT +++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVD-QGILG-----DAKTYTVLMN 600

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GL K   VD A+E+  +M+ K I PDV +Y  +I GF    +  +A  +F EM+++G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NV+ +++++   C++G++E+A +LL+ M   G+ PNA  Y T++DG+C +G +  A  LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M+  G   + F Y+ L++G C+  ++E A++++     KG   +   +N L   +F+ 
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKF 779

Query: 249 HQVERAFKLFDEM-----QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
            + E   ++ + +      R G   D   Y   ID LCK G +  A ELF  ++      
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
            + +Y+ L++G  K GR    + +F       +  D + Y+++I+A   +G   KA  L 
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898

Query: 364 LDMEAKGVAPD 374
             M AK    D
Sbjct: 899 DQMFAKNAVDD 909



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 187/423 (44%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL--- 70
           G  P   TY  LI+GLC+      A +L  EM       GV    D   Y+ +IDGL   
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM----DSLGVSL--DNHTYSLLIDGLLKG 325

Query: 71  --------------------------------CKEGFVDKAKELLLQMKDKNINPDVVTY 98
                                            KEG ++KAK L   M    + P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
            S+I G+C   +  +   L +EM  + +  +  T+  ++  +C +G ++ A  +++ MI 
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RPN  +Y TL+  F    R   A  +   M+  G   ++F Y+ LI G  K K ++ 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A S   EM+  G+KP   TY     G  E  +   A K   EM+  GV  +       I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
             CK   ++EA   +R++       D ++Y+ L++GL K+ ++  A E+F  +    +  
Sbjct: 566 EYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DV +Y ++I+     G M KA  +F +M  +G+ P+ + +N L+ G  R+ E  K  ELL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685

Query: 399 HRM 401
             M
Sbjct: 686 DEM 688



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 180/395 (45%), Gaps = 51/395 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA + +  +   G   +  TY+ L+NGL +      A  +F EM  G G       PD 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+G  K G + KA  +  +M ++ + P+V+ YN ++ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN VT+  I+D  CK+G + EA +L + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAKELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + PTV+TY +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK-----CELDIRSYSCLIDGLC 316
              G+  D   Y   I+   K G   +AL L   +         C+L I +   L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 52/437 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLF--------EEMINGNGEF----GVVCK---PDAVI 62
           +V TY  LI   CR G+  +  ++            +N +G       ++CK   P    
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +IDGLCK   ++ AK LL++M    ++ D  TY+ +I G     +++ AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      +   +  + K G ME+A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P VV Y TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------------------- 282
               +  +   A ++  EM+  G+A D + Y + I GL K                    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 283 ----------NGYIVEALELFRTLRILK----CELDIRSYSC--LIDGLCKSGRLKIAWE 326
                     +GYI EA E     + +K    C +      C  LI+  CK  ++  A  
Sbjct: 520 PNAFTYGAFISGYI-EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACS 578

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
            + S+    ++ D  TY ++++ L  + K+D A ++F +M  KG+APD  ++  L+ G  
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 387 RNNETSKVVELLHRMDE 403
           +     K   +   M E
Sbjct: 639 KLGNMQKASSIFDEMVE 655



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 181/422 (42%), Gaps = 34/422 (8%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP-------------DAVI 62
           E  + ++S L   LC  G    AL++ E MI  N     V                D V+
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  + DG   +G++++A  +        + P +     ++      N  +    ++  M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 123 DQGVQPNVVTFSVIMDELCKNGKME---------------------EASQLLELMIQIGV 161
           ++ V  +V T+ +++   C+ G ++                      A +L E MI  G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P  + Y+ L+DG C   R+  AK L V M+S+G   +  +YS+LI+G  K +  + A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM+S GI      Y+     + +   +E+A  LFD M   G+     AY + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +   + +  EL   ++     +   +Y  ++ G+C SG L  A+ +   +       +VV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            Y  +I     + +   A  +  +M+ +G+APD   +N+L++G  +     +    L  M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 402 DE 403
            E
Sbjct: 514 VE 515



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 151/358 (42%), Gaps = 48/358 (13%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV-QPNVVTFSVIMDELCKNGKMEEA 149
           INP+VV   SV+R     +D ++    F  +  Q V +  + +FS +  +LC  G  E+A
Sbjct: 60  INPEVVL--SVLRS-KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKA 116

Query: 150 SQLLELMIQ-------------------IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++E MI+                   +G   +  ++  L DG+   G +  A  +FV 
Sbjct: 117 LSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA--VFVF 174

Query: 191 MESMGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG---- 244
             SMG +    +    +L++   +   ++    +Y  M+ + +   V TY+ L I     
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 245 ---------LFEIHQ--------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                    LF+  +        V+ A KL + M   G+    + Y   IDGLCK   + 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLE 294

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +A  L   +  L   LD  +YS LIDGL K      A  L H +    +      Y+  I
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +  +G M+KA  LF  M A G+ P   A+ +L+ G  R     +  ELL  M +RN
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 39/256 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           EA  LF ++K  G  P+   Y+TL++G CR      A+ +F                   
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 43  -----------EEMING--NGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                       E++N   +G F    KP+ V Y  +ID LCKEG ++ AKEL  QM++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N+ P V+TY S++ G+       E   +F E +  G++P+ + +SVI++   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SQLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  A+++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  G +PNV +Y+  I  L + G    A  + ++M +        CKPD V  T 
Sbjct: 238 LLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEG------CKPDVVTNTV 291

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC  G V  AK++  +MK  +  PD VTY +++       DS     ++  M   G
Sbjct: 292 LIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG 351

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              NVV ++ ++D LC+ G+++EAS + + M Q G+ P  + YN+L+ GF    R+N A 
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHAL 411

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M   G   N ++Y + IN Y K+ E   A+  Y  M SKGI P VV  N +   L
Sbjct: 412 ELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSL 471

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  A ++F E++  GV  D   Y   I    K     EA+++F  +   +C  D+
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV 531

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + LID L K+GR   AW++FH L    L     TYN ++  L  +GK+ +   L  +
Sbjct: 532 LAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEE 591

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M +    P+ + +NT++    +N E +  + +L+ M
Sbjct: 592 MNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNM 627



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 209/431 (48%), Gaps = 33/431 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI--------------- 46
           EA  +  K++  GC+P+V+T + LI  LC  G    A ++F +M                
Sbjct: 269 EAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLL 328

Query: 47  -----NGNG----EFGVVCKPDA-----VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                NG+     E     K D      V YT ++D LC+ G VD+A ++  QMK K I 
Sbjct: 329 DKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIE 388

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   +YNS+I GF  A+  N A  LF  M   G  PN  T+ + ++   K+G+  +A + 
Sbjct: 389 PQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKR 448

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            ELM   G+ P+    N ++     +GR+  AK +F  ++S+G   +  +Y+++I    K
Sbjct: 449 YELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSK 508

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               + A+ ++SEM+     P V+  N+L   L++  +   A+K+F E++   +      
Sbjct: 509 ASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCT 568

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL + G + E + L   +       ++ +Y+ ++D LCK+G +  A  + +++ 
Sbjct: 569 YNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMT 628

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + D+ +YN  +H L  + ++ +A  +F  M+ K +APD     T++   ++N   +
Sbjct: 629 MKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLMN 687

Query: 393 KVVELLHRMDE 403
              E LH + E
Sbjct: 688 ---EALHTLKE 695



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 203/453 (44%), Gaps = 78/453 (17%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            E   L  ++ +    PN+ITY+T+++ LC+ G    AL +   M          C PD  
Sbjct: 584  EVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG------CMPDLS 637

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE- 120
             Y T + GL KE  + +A  +  QMK K + PD  T  +++  F      NEA     E 
Sbjct: 638  SYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEY 696

Query: 121  MMDQGVQPNVVTFSVIMD-----------------------------------ELCKNGK 145
            ++  G + +  +F  +M+                                    LCK+ K
Sbjct: 697  ILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKK 756

Query: 146  MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
              EA +L++    +GV      YN L+ G      ++ A+ LF  M+ +GC  + F+Y++
Sbjct: 757  ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNL 816

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            +++   K+  IE  L +  EM  KG + T VTYNT+  GL +   +  A  L+ ++   G
Sbjct: 817  ILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEG 876

Query: 266  VAADTWAYRTFIDGLCKNGYIVEALELFRTL-------------------RILK-----C 301
             +     Y   +DGL K+G I +A +LF  +                   R+       C
Sbjct: 877  FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVC 936

Query: 302  EL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            EL           DI+SY+ LI  LC +GRL  +   F  L    L  D++TYN++IH L
Sbjct: 937  ELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996

Query: 351  CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
               G++++A  LF DME  G+AP+   +N+L+L
Sbjct: 997  GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLIL 1029



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 171/343 (49%), Gaps = 6/343 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L  K ++ G      +Y+ LI GL       VA  LF EM        + C PD 
Sbjct: 758  LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKR------LGCDPDE 811

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  I+D + K   ++   ++  +M  K      VTYN++I G   +    EA  L+ +
Sbjct: 812  FTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYK 871

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M +G  P   T+  ++D L K+GK+E+A  L + M+  G +PN  +YN L++G+ L G 
Sbjct: 872  LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +  ELF +M   G   ++ SY++LI   C    +  +LS + ++   G++P ++TYN 
Sbjct: 932  TEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNL 991

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL    ++E A  LF++M++ G+A + + Y + I  L K G   EA +++  L    
Sbjct: 992  LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + ++ +Y+ LI G   SG    A+  +  +  G    +  TY
Sbjct: 1052 WKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ LI  L ++G+   A+ +++ M       G+V  P    
Sbjct: 166 APVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATD----GIV--PSVRT 219

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K   V+    LL +M+D  + P+V +Y   IR    A    EA ++  +M 
Sbjct: 220 YSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKME 278

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G +P+VVT +V++  LC  G++ +A  +   M     +P+   Y TL+D     G   
Sbjct: 279 DEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSR 338

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ +M++ G   NV +Y+ +++  C+   ++ A  ++ +M  KGI+P   +YN+L 
Sbjct: 339 SVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLI 398

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  ++  A +LF+ M  HG   + + Y  FI+   K+G  ++A++ +  ++     
Sbjct: 399 SGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIV 458

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++  L KSGRL +A  +FH L    +  D +TY +MI         D+A  +
Sbjct: 459 PDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKV 518

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F +M      PD +A N+L+    +    ++  ++ H + E N
Sbjct: 519 FSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMN 561



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 163/326 (50%)

Query: 59   DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            D    + +I  LCK     +A EL+ + +   ++    +YN++I G    N  + A+ LF
Sbjct: 740  DDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLF 799

Query: 119  IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             EM   G  P+  T+++I+D + K+ ++E+  ++ + M   G       YNT++ G   +
Sbjct: 800  SEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKS 859

Query: 179  GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
              +  A +L+  + S G      +Y  L++G  K+ +IE A  L+ EML  G KP    Y
Sbjct: 860  KMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIY 919

Query: 239  NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            N L  G       E+  +LF  M   G+  D  +Y   I  LC  G + ++L  FR L  
Sbjct: 920  NILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTE 979

Query: 299  LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            L  E D+ +Y+ LI GL +SGRL+ A  LF+ + +  +  ++ TYN +I  L  +GK  +
Sbjct: 980  LGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAE 1039

Query: 359  AHDLFLDMEAKGVAPDCVAFNTLMLG 384
            A  ++ ++   G  P+   +N L+ G
Sbjct: 1040 AGKMYEELLKNGWKPNVFTYNALIGG 1065



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 132/240 (55%), Gaps = 6/240 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  L+ KL + G  P   TY  L++GL + G    A +LF+EM+    ++G  CKP+  
Sbjct: 864  EAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEML----DYG--CKPNRA 917

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            IY  +++G    G  +K  EL   M D+ INPD+ +Y  +I   C A   N++   F ++
Sbjct: 918  IYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + G++P+++T+++++  L ++G++EEA  L   M + G+ PN + YN+L+      G+ 
Sbjct: 978  TELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKA 1037

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +++  +   G K NVF+Y+ LI GY  +   + A + Y +M+  G  P   TY  L
Sbjct: 1038 AEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 6/359 (1%)

Query: 23   STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
            S LI  LC++   + A     E++      GV  K  +  Y  +I GL  E  +D A+ L
Sbjct: 745  SPLIRHLCKSKKALEA----HELVKKFESLGVSLKTGS--YNALICGLVDENLIDVAEGL 798

Query: 83   LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
              +MK    +PD  TYN ++     +    +  ++  EM  +G +   VT++ I+  L K
Sbjct: 799  FSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVK 858

Query: 143  NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            +  + EA  L   ++  G  P    Y  L+DG    G++  A++LF  M   GCK N   
Sbjct: 859  SKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAI 918

Query: 203  YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
            Y+IL+NGY      E    L+  M+ +GI P + +Y  L   L    ++  +   F ++ 
Sbjct: 919  YNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLT 978

Query: 263  RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
              G+  D   Y   I GL ++G + EA+ LF  +       ++ +Y+ LI  L K G+  
Sbjct: 979  ELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAA 1038

Query: 323  IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A +++  L +     +V TYN +I      G  D A   +  M   G  P+   +  L
Sbjct: 1039 EAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 195/436 (44%), Gaps = 41/436 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++  L ++G   +A  +F E+ +     GV   PD 
Sbjct: 443 LKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKS----IGVC--PDN 496

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++  +M +    PDV+  NS+I     A   NEA ++F E
Sbjct: 497 ITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHE 556

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  + P   T++ ++  L + GK++E   LLE M      PN   YNT++D  C  G 
Sbjct: 557 LKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGE 616

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-------------- 226
           VN A  +  +M   GC  ++ SY+  ++G  K   +  A  ++ +M              
Sbjct: 617 VNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTI 676

Query: 227 ---------------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                L  G K    ++++L  G+ +   +E++ +  + +    
Sbjct: 677 LPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSR 736

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +     I  LCK+   +EA EL +    L   L   SY+ LI GL     + +A 
Sbjct: 737 ILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAE 796

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  + R     D  TYN+++ A+    +++    +  +M  KG     V +NT++ G 
Sbjct: 797 GLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGL 856

Query: 386 IRNNETSKVVELLHRM 401
           +++    + ++L +++
Sbjct: 857 VKSKMLYEAMDLYYKL 872



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           + K +   + TI   L  EG +  A   L  MK+  I  +  TYN +I     +    EA
Sbjct: 142 IVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREA 201

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M   G+ P+V T+SV+M    K   +E    LL  M   GV+PN + Y   +  
Sbjct: 202 MEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRV 260

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               GR   A ++   ME  GCK +V + ++LI   C    +  A  ++ +M +   KP 
Sbjct: 261 LGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPD 320

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTY TL     +        ++++ M+  G   +  AY   +D LC+ G + EA ++F 
Sbjct: 321 RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFD 380

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            ++    E    SY+ LI G  K+ RL  A ELF+ +       +  TY + I+     G
Sbjct: 381 QMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSG 440

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  KA   +  M++KG+ PD VA N ++    ++        + H +
Sbjct: 441 ESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF ++  +GC+PN   Y+ L+NG    G+T     LF+ M++          PD  
Sbjct: 899  DAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG------INPDIK 952

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT +I  LC  G ++ +     Q+ +  + PD++TYN +I G   +    EA  LF +M
Sbjct: 953  SYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM 1012

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G+ PN+ T++ ++  L K GK  EA ++ E +++ G +PN F YN L+ G+ ++G  
Sbjct: 1013 EKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGST 1072

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
            + A   +  M   GC  N  +Y  L N
Sbjct: 1073 DNAFASYGQMIVGGCPPNSSTYMQLPN 1099



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 43/334 (12%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVV----TFSVIMDELCKNGKMEEASQLLELMIQIGVRP 163
           A D  EA +LF  +  Q   P +V    + + +++ +  +G++ + +Q+ +LM +  V+ 
Sbjct: 89  AADPAEALQLFKSVAQQ---PRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKA 145

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   + T+     + G +  A      M+  G   N ++Y+ LI    K+     A+ +Y
Sbjct: 146 NVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVY 205

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M + GI P+V TY+ L +  F    VE    L  EM+ HGV  + ++Y   I  L + 
Sbjct: 206 KVMATDGIVPSVRTYSVLMLA-FGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQA 264

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL------------ 331
           G   EA ++ + +    C+ D+ + + LI  LC +GR+  A ++F  +            
Sbjct: 265 GRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTY 324

Query: 332 ------------PRGV------LIAD-----VVTYNIMIHALCADGKMDKAHDLFLDMEA 368
                        R V      + AD     VV Y  ++ ALC  G++D+A D+F  M+ 
Sbjct: 325 ITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQ 384

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           KG+ P   ++N+L+ G ++ +  +  +EL + M+
Sbjct: 385 KGIEPQQYSYNSLISGFLKADRLNHALELFNHMN 418



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 6/139 (4%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            ++ + F +L   G EP++ITY+ LI+GL R+G    A++LF +M     + G+   P+  
Sbjct: 969  DSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDM----EKSGIA--PNLY 1022

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y ++I  L KEG   +A ++  ++      P+V TYN++I G+  +  ++ A   + +M
Sbjct: 1023 TYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQM 1082

Query: 122  MDQGVQPNVVTFSVIMDEL 140
            +  G  PN  T+  + ++L
Sbjct: 1083 IVGGCPPNSSTYMQLPNQL 1101


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 202/400 (50%), Gaps = 11/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++ + GC+P+ ++Y+TLI+ LC+ G    A            E  +   P   +
Sbjct: 200 AHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR-----------ELAMSFTPSVPV 248

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+G+CKE   ++A +LL +M +K I+P+V++Y ++I     A +   +  +  +M 
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN+ TF+ ++      G   EA    + MI+ GV PN   YN LM G C    + 
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +F  ME  GC  NV +YS LI+GY K  +++GA  +++ M++ G  P VV Y  + 
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L       +A+ L + MQ      +T  + TFI GLC +G +  A+++F  +    C 
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF 488

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ L+D L K  R   A+ L   +    +  ++VTYN +I+  C  G + +A +L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
              M  +G  PD +  N ++    +  + +  ++L+ R+ 
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +PNVI+Y+T+IN L   G+  ++L +  +M      F   C P+  
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM------FARGCSPNLH 317

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T++I G   +G   +A +   +M  + + P+VV YN+++ G C      +A  +F +M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV T+S ++D   K G ++ AS++   MI  G  PN   Y  ++D  C     
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A  L  +M+   C  N  +++  I G C +  ++ A+ ++ +M + G  P   TYN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +   AF L  +M+  G+  +   Y T I G C  G + EALEL   + +   
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  + + +ID  CK G++ IA +L   L  G    D++ Y  +I  +C    +++A  
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
               M ++G++P+   +N L+     N   S  V+ L
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F +++ F  +P V  Y+ +++ L       +   ++  M     E      P+  
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME------PNVF 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LCK   VD A +LL++M  K  +PD V+Y ++I   C      EA+ L +  
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+V  ++ +++ +CK    EEA QLL+ M+  G+ PN   Y T+++     G V
Sbjct: 243 -----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNV 297

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             +  +   M + GC  N+ +++ LI G+        AL  +  M+ +G+ P VV YN L
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +  A  +F++M+ +G   +   Y   IDG  K G +  A E++  +    C
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+C++D LC++     A+ L  ++       + VT+N  I  LC  G++D A  
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M   G  P+   +N L+   +++    +   L+  M+ R
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 182/430 (42%), Gaps = 70/430 (16%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           +AL  F+ + N         K   + Y  +I+ L  E  +D  + LL QMK + I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            + SVI  +  A  S +A + F  M D  V+P V  ++ I+D L    + +  + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI----------- 205
            + G+ PN F YN L+   C   RV+ A +L V M S GC  +  SY+            
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 206 -------------------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
                              LING CK    E A  L  EM++KGI P V++Y T+   L 
Sbjct: 233 KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 247 EIHQVE-----------------------------------RAFKLFDEMQRHGVAADTW 271
           +   VE                                    A   +D M R GV  +  
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           AY   + GLC    + +A+ +F  + I  C  ++R+YS LIDG  K+G L  A E+++ +
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                  +VV Y  M+  LC +   ++A+ L  +M+ +   P+ V FNT + G   +   
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRV 472

Query: 392 SKVVELLHRM 401
              +++  +M
Sbjct: 473 DWAIKVFDQM 482



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 7/353 (1%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           G+ C  D  ++ ++I    + G  ++A +   +M+D  + P V  YN ++      N   
Sbjct: 106 GISCSED--LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQ 163

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
               ++  M   G++PNV T+++++  LCKN +++ A +LL  M   G  P+   Y TL+
Sbjct: 164 MINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLI 223

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
              C  G+V  A+EL     +M    +V  Y+ LING CK    E A  L  EM++KGI 
Sbjct: 224 SSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V++Y T+   L +   VE +  +  +M   G + +   + + I G    G   EAL+ 
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           +  +       ++ +Y+ L+ GLC    L  A  +F+ +       +V TY+ +I     
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G +D A +++  M   G  P+ VA+  ++    RN+  ++   L+  M   N
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++  G E N++TY+T+I G C  G    AL L  +M+          KPDA+
Sbjct: 509 EAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG------TKPDAI 562

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               +ID  CK+G V+ A +L+ ++     +PD++ Y S+I G C      EA      M
Sbjct: 563 TVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRM 622

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + +G+ PNV T++V++  L  N     A Q L+
Sbjct: 623 LSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 16/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++K+ G  P+ +    +I G  +      AL +F +        G +C     
Sbjct: 398 KAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC----- 452

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               I   LCK+G VD A   L  M++K I P+VV YN+++   C   + + A+ +F EM
Sbjct: 453 --NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+QPN  T+S+++D   KN   + A +++  MI      N  +YNT+++G C  G+ 
Sbjct: 511 LEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQT 570

Query: 182 NRAKELFVSM-----ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           ++AKE+  ++      SMGC     SY+ +I+G+ K  + + A+  Y EM   GI P VV
Sbjct: 571 SKAKEMLQNLIKEKRYSMGCT----SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVV 626

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T+ +L  G  + ++++ A ++  EM+   +  D  AY   IDG CK   +  A  LF  L
Sbjct: 627 TFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSEL 686

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
             L    ++  Y+ LI G    G++  A +L+  +    +  D+ TY  MI  L  DG +
Sbjct: 687 LELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNL 746

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             A DL+ ++ A G+ PD + +  L+ G  +  +  +  ++L  M +++
Sbjct: 747 ILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKD 795



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 208/404 (51%), Gaps = 7/404 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +    ++  G EPNV+ Y+ ++   CR  +  +A ++F EM+    E G+  +P+   
Sbjct: 468 ATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML----EKGL--QPNNFT 521

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +IDG  K      A E++ QM   N   + V YN++I G C    +++AK +   ++
Sbjct: 522 YSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581

Query: 123 -DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++       +++ I+D   K G  + A +    M + G+ PN   + +L++GFC + R+
Sbjct: 582 KEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRM 641

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   M+S   K +V +Y  LI+G+CK  +++ A +L+SE+L  G+ P V  YN L
Sbjct: 642 DLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNL 701

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A  L+ +M   G++ D + Y T IDGL K+G ++ A +L+  L  L  
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGI 761

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D   Y  L++GL K G+   A ++   + +     +V+ Y+ +I     +G +++A  
Sbjct: 762 VPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFR 821

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  +M  KG+  D   FN L+ G +     +  +  L   + R+
Sbjct: 822 VHDEMLEKGLVHDDTIFNLLVSGRVEKPPAAAKISSLASPEMRS 865



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 201/423 (47%), Gaps = 43/423 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  ++  FG   +VI  ++LI G C       AL+ F  M     E G+   PD V
Sbjct: 328 EAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRM----EEEGLA--PDKV 381

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +++ +I+  CK   ++KA E+  +MK   I P  V  + +I+G   A     A  +F + 
Sbjct: 382 MFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDS 441

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  +    +   + +  LCK GK++ A+  L +M   G+ PN   YN +M   C    +
Sbjct: 442 FETWIAHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNM 500

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ +F  M   G + N F+YSILI+G+ KN++ + A  + ++M++   +   V YNT+
Sbjct: 501 DLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTI 560

Query: 242 FIGLFEIHQVERAFKL------------------------------------FDEMQRHG 265
             GL ++ Q  +A ++                                    + EM  +G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENG 620

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           ++ +   + + I+G CK+  +  ALE+   ++    +LD+ +Y  LIDG CK   +K A+
Sbjct: 621 ISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAY 680

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  L    L+ +V  YN +I      GKMD A DL+  M   G++ D   + T++ G 
Sbjct: 681 TLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740

Query: 386 IRN 388
           +++
Sbjct: 741 LKD 743



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 190/470 (40%), Gaps = 89/470 (18%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           K F  E +   ++ L+N   R      A++ F  M++ N        P       ++  L
Sbjct: 161 KRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRN------VVPFVPYVNNVLSSL 214

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
            +   +D+AKE+  +M    +  D VT   ++R         EA ++F  +M +G +P+ 
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDG 274

Query: 131 VTFSVIMDELCK------------------------------------NGKMEEASQLLE 154
           + FS+ +   CK                                     G MEEA ++ +
Sbjct: 275 LLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKD 334

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+  G+  +     +L+ GFC    + +A + F  ME  G   +   +S++I  +CKN 
Sbjct: 335 EMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNM 394

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E+E A+ +Y  M S GI P+ V  + +  G  +    E A ++F++      + +TW   
Sbjct: 395 EMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFND------SFETWIAH 448

Query: 275 TFIDG-----LCKNGYIVEALELFRTLRILKCELDI-------------------RS--- 307
            F+       LCK G +  A    R +     E ++                   RS   
Sbjct: 449 GFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508

Query: 308 -------------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
                        YS LIDG  K+   + AWE+ + +      A+ V YN +I+ LC  G
Sbjct: 509 EMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVG 568

Query: 355 KMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  KA ++  ++ + K  +  C ++N+++ G  +  +T   VE    M E
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSE 618



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 166/366 (45%), Gaps = 4/366 (1%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           S L+     +  T++   +   +++ +  F       A  Y  +++   +   +D A + 
Sbjct: 134 SNLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNY--LLNAYIRNRRMDYAVDC 191

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
              M D+N+ P V   N+V+     +N  +EAK ++ +M+  GV  + VT  ++M    +
Sbjct: 192 FNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLR 251

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVF 201
             K EEA ++   ++  G  P+  +++  +   C    +  A +L   M E  G   +  
Sbjct: 252 ERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQE 311

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ +I    K   +E A+ +  EM+  GI  +V+   +L  G    +++ +A   F+ M
Sbjct: 312 TYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRM 371

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G+A D   +   I+  CKN  + +A+E+++ ++ +           +I G  K+   
Sbjct: 372 EEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESP 431

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A E+F+       IA     N +   LC  GK+D A      ME KG+ P+ V +N +
Sbjct: 432 EAALEIFND-SFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNM 490

Query: 382 MLGCIR 387
           ML   R
Sbjct: 491 MLAHCR 496


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 12/385 (3%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T++ ++  LC  G    AL L  +M           +P+AV Y T+I G C  G V  A 
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQM----------PRPNAVTYNTVIAGFCSRGRVQAAL 205

Query: 81  ELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIMD 138
           +++ +M+++  I P+  TY +VI G+C     +EA ++F EM+ +G V+P  V ++ ++ 
Sbjct: 206 DIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIG 265

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
             C  GK++ A    + M++ GV      YN L+    + GR   A EL   M   G   
Sbjct: 266 GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL 325

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +VF+Y+ILING+CK   ++ AL ++  M  +G++ TVVTY +L   L +  QV+   KLF
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           DE  R G+  D   Y   I+    +G I  A E+   +   +   D  +Y+ L+ GLC  
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           GR+  A +L   + +  +  D+VTYN +I      G +  A  +  +M  KG  P  + +
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 505

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           N L+ G  +N +      ++  M E
Sbjct: 506 NALIQGLCKNGQGDDAENMVKEMVE 530



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 195/378 (51%), Gaps = 6/378 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            PN +TY+T+I G C  G    AL++  EM    G       P+   Y T+I G CK G 
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGR 236

Query: 76  VDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           VD+A ++  +M  K  + P+ V YN++I G+C     + A      M+++GV   V T++
Sbjct: 237 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 296

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++  L  +G+  EA +L+E M   G+  + F YN L++G C  G V +A E+F +M   
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G +  V +Y+ LI    K  +++    L+ E + +GI+P +V YN L         ++RA
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
           F++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+ +Y+ LI G
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
               G +K A  + + +        ++TYN +I  LC +G+ D A ++  +M   G+ PD
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536

Query: 375 CVAFNTLMLGCIRNNETS 392
              + +L+ G    +E +
Sbjct: 537 DSTYISLIEGLTTEDERA 554



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 168/307 (54%), Gaps = 9/307 (2%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C A     A    +E++ Q  +PN VT++ ++   C  G+++ A  ++ 
Sbjct: 154 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+  TV TYN L   LF   +   A++L +EM   G+A D + 
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G + +ALE+F  +        + +Y+ LI  L K G+++   +LF    
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CI--RNN 389
           R  +  D+V YN +I++    G +D+A ++  +ME K +APD V +NTLM G C+  R +
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 390 ETSKVVE 396
           E  K+++
Sbjct: 450 EARKLID 456



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G   +V TY+ LING C+ G+   AL +FE M       GV  +   V
Sbjct: 310 EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENM----SRRGV--RATVV 363

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT++I  L K+G V +  +L  +   + I PD+V YN++I     + + + A  +  EM
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ VT++ +M  LC  G+++EA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI P   TY +L
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543

Query: 242 FIGL 245
             GL
Sbjct: 544 IEGL 547


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 207/435 (47%), Gaps = 44/435 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV-CKPDAV 61
           A  L   +K  G  P+++TY+TL+NG C+ G    A  L        GE  +V  +P+ +
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM-------GEISLVNLEPNVI 88

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+ID  CK   ++ A  +  +M  K++ PDVVTY  ++ G C +    EAK +F EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
            + GV PN                                   VV ++ +MD L K G  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A  + +++++  + PN   Y+ L+DG C  G VN+ + L   ME      NV  YS +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++GY K   +  A+ +  +M+ + I P V  Y TL  G F+  Q   A  LF EM+  G+
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +   +F++ L ++G + EA ELF+ +       D  +Y+ ++DG  K+G+   A+ 
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +       DVV YN++I+ L   GK + +      M   G+APD   FNT++    
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 387 RNNETSKVVELLHRM 401
           +       ++LL+ M
Sbjct: 448 KEGNLGNALKLLNEM 462



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 212/401 (52%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++      P+V+TY+ ++NGLC++G    A ++F EM     E GVV  P+  
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM----EEVGVV--PNRF 158

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L KEG V +A  L  +M  + I  DVV Y +++ G   A  +N A+ +F  +
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVL 218

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN VT+S ++D  CK G + +   LL+ M +  + PN  VY++++DG+   G +
Sbjct: 219 LEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLL 278

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++   M       NVF Y  LI+GY K  +   AL L+ EM S+G++      ++ 
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    ++E A +LF +M   G+  D   Y + +DG  K G   +A  + + +     
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
             D+ +Y+ LI+GL K G  K   E FH+  R + L  D  T+N MI+A C +G +  A 
Sbjct: 399 GFDVVAYNVLINGLFKLG--KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M++ G+ P+ +  N L+       E  K ++LL+ M
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           ++ LI+G CR G    A+ L E M            PD V Y T+++G CK G +  AK+
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L+ ++   N+ P+V+TY ++I  +C +    +A  ++ EM  + + P+VVT++ IM+ LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K+GK+EEA  +   M ++GV PN F Y TL+D     G V  A  L   M   G   +V 
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ L++G  K      A  ++  +L + + P  VTY+ L  G  ++  V +   L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K+ + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
            IA +LF  +    L  +    +  ++ L   G+M++A +LF DM ++G+ PD V + ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           M G  +  + S    +   M E++
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKS 397



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 160/280 (57%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  F+V++D  C+NG++  A +LLE M   G  P+   YNTLM+GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + P VVTY  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ L+DGL K+G    A ++F  L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ME K + P+ + +++++ G  +    ++ ++++ +M +RN
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  + + G  P+ + Y+++++G  + G    A N+ +EM   +  F      D V
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF------DVV 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL K G  + ++     M+   + PD  T+N++I  +C   +   A +L  EM
Sbjct: 404 AYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PN +T ++++  LC  G++E+   LL  M+ +G  P    +  ++D    + R 
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   +  MG K ++ +Y+ LI+ +C+   I  A  ++ +M+ KGI   ++TYN L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +++AF +  +M   GV+ +   Y   + GL     I EA  L   ++    
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  L+ G  K G +K   +L+  +     +    TYN++I       KM +A +
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           L  +M+ +G+ P+   ++ L+ G  + ++  ++ + L R
Sbjct: 703 LMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 192/402 (47%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K+ G E N     + +N L R+G    A  LF++M++     G++  PD V 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR----GLL--PDRVN 369

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT+++DG  K G    A  +  +M +K+   DVV YN +I G  +     E++     M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL-FKLGKYESESFHTGMR 428

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  TF+ +++  CK G +  A +LL  M   G++PN+   N L+   C  G + 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  +L   M  MG      ++  +++   K++  +  L ++ +++  G+K  + TYNTL 
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  + RA  +F +M   G+ AD   Y   I G C + ++ +A  +   +      
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ L+ GL  +  +K A  L + +    L+ +  TY+I++      G M +   L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + +M  KG  P    +N L+    +  + S+  EL+  M  R
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 151/314 (48%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I   V  +N +I G+C   + + A  L   M  +G  P++VT++ +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P   +Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   +DGL K G    A ++F+ L       +  +YS LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  +V+ Y+ ++      G +++A D+   M  + + P+   + TL+ G  + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 391 TSKVVELLHRMDER 404
               ++L   M  R
Sbjct: 313 RGIALDLFKEMKSR 326



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++K  G  PN  TY  L++G  + G+    + L+ EMI      G V  P   
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
            Y  +I    K   + +AKEL+ +M+ + I P+  TY+ +I G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
               AKRLF EM ++G  P   T + I   L K GK  +A ++L  + +  V+
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKVK 795



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 24/177 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---MINGNGEFGVVCKP 58
           +A A+ +++   G  PNV TY+ L+ GL        A  L +E   ++N   E G+V  P
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLS-------AARLIKEAAGLVNQMKERGLV--P 644

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A  Y  ++ G  K G + +  +L  +M  K   P   TYN +I  F      ++AK L 
Sbjct: 645 NATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELM 704

Query: 119 IEMMDQGVQPNVVTFSVI------------MDELCKNGKMEEASQLLELMIQIGVRP 163
            EM  +G+ PN  T+ ++            +++  K     EA +L E M + G  P
Sbjct: 705 QEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 202/400 (50%), Gaps = 11/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++ + GC+P+ ++Y+TLI+ LC+ G    A            E  +   P   +
Sbjct: 200 AHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR-----------ELAMSFTPSVPV 248

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+G+CKE   ++A +LL +M +K I+P+V++Y ++I     A +   +  +  +M 
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN+ TF+ ++      G   EA    + MI+ GV PN   YN LM G C    + 
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG 368

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +F  ME  GC  NV +YS LI+GY K  +++GA  +++ M++ G  P VV Y  + 
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L       +A+ L + MQ      +T  + TFI GLC +G +  A+++F  +    C 
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF 488

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ L+D L K  R   A+ L   +    +  ++VTYN +I+  C  G + +A +L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
              M  +G  PD +  N ++    +  + +  ++L+ R+ 
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 6/397 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +PNVI+Y+T+IN L   G+  ++L +  +M      F   C P+  
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM------FARGCSPNLH 317

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T++I G   +G   +A +   +M  + + P+VV YN+++ G C      +A  +F +M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV T+S ++D   K G ++ AS++   MI  G  PN   Y  ++D  C     
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A  L  +M+   C  N  +++  I G C +  ++ A+ ++ +M + G  P   TYN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +   AF L  +M+  G+  +   Y T I G C  G + EALEL   + +   
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  + + +ID  CK G++ IA +L   L  G    D++ Y  +I  +C    +++A  
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
               M ++G++P+   +N L+     N   S  V+ L
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F +++ F  +P V  Y+ +++ L       +   ++  M     E      P+  
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME------PNVF 182

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  LCK   VD A +LL++M  K  +PD V+Y ++I   C      EA+ L +  
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF 242

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+V  ++ +++ +CK    EEA QLL+ M+  G+ PN   Y T+++     G V
Sbjct: 243 -----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNV 297

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             +  +   M + GC  N+ +++ LI G+        AL  +  M+ +G+ P VV YN L
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     +  A  +F++M+ +G   +   Y   IDG  K G +  A E++  +    C
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+C++D LC++     A+ L  ++       + VT+N  I  LC  G++D A  
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M   G  P+   +N L+   +++    +   L+  M+ R
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 182/430 (42%), Gaps = 70/430 (16%)

Query: 37  VALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           +AL  F+ + N         K   + Y  +I+ L  E  +D  + LL QMK + I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            + SVI  +  A  S +A + F  M D  V+P V  ++ I+D L    + +  + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI----------- 205
            + G+ PN F YN L+   C   RV+ A +L V M S GC  +  SY+            
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 206 -------------------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
                              LING CK    E A  L  EM++KGI P V++Y T+   L 
Sbjct: 233 KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 247 EIHQVE-----------------------------------RAFKLFDEMQRHGVAADTW 271
           +   VE                                    A   +D M R GV  +  
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           AY   + GLC    + +A+ +F  + I  C  ++R+YS LIDG  K+G L  A E+++ +
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
                  +VV Y  M+  LC +   ++A+ L  +M+ +   P+ V FNT + G   +   
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRV 472

Query: 392 SKVVELLHRM 401
              +++  +M
Sbjct: 473 DWAIKVFDQM 482



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 7/353 (1%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           G+ C  D  ++ ++I    + G  ++A +   +M+D  + P V  YN ++      N   
Sbjct: 106 GISCSED--LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQ 163

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
               ++  M   G++PNV T+++++  LCKN +++ A +LL  M   G  P+   Y TL+
Sbjct: 164 MINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLI 223

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
              C  G+V  A+EL     +M    +V  Y+ LING CK    E A  L  EM++KGI 
Sbjct: 224 SSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V++Y T+   L +   VE +  +  +M   G + +   + + I G    G   EAL+ 
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           +  +       ++ +Y+ L+ GLC    L  A  +F+ +       +V TY+ +I     
Sbjct: 339 WDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            G +D A +++  M   G  P+ VA+  ++    RN+  ++   L+  M   N
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 6/231 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   ++   C PN +T++T I GLC +G    A+ +F++M N        C P+  
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG------CFPNTT 492

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D L K+    +A  L+  M+ + I  ++VTYN++I G+C A    EA  L  +M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P+ +T ++++D  CK GK+  A QL++ +      P+   Y +L+ G C    V
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             A      M S G   NV ++++L+     N    GA+     +L  G +
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 207/435 (47%), Gaps = 44/435 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV-CKPDAV 61
           A  L   +K  G  P+++TY+TL+NG C+ G    A  L        GE  +V  +P+ +
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM-------GEISLVNLEPNVI 88

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+ID  CK   ++ A  +  +M  K++ PDVVTY  ++ G C +    EAK +F EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
            + GV PN                                   VV ++ +MD L K G  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A  + +++++  + PN   Y+ L+DG C  G VN+ + L   ME      NV  YS +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++GY K   +  A+ +  +M+ + I P V  Y TL  G F+  Q   A  LF EM+  G+
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +   +F++ L ++G + EA ELF+ +       D  +Y+ ++DG  K+G+   A+ 
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +       DVV YN++I+ L   GK + +      M   G+APD   FNT++    
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 387 RNNETSKVVELLHRM 401
           +       ++LL+ M
Sbjct: 448 KEGNLGNALKLLNEM 462



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 212/401 (52%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++      P+V+TY+ ++NGLC++G    A ++F EM     E GVV  P+  
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM----EEVGVV--PNRF 158

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L KEG V +A  L  +M  + I  DVV Y +++ G   A  +N A+ +F  +
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVL 218

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN VT+S ++D  CK G + +   LL+ M +  + PN  VY++++DG+   G +
Sbjct: 219 LEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLL 278

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++   M       NVF Y  LI+GY K  +   AL L+ EM S+G++      ++ 
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    ++E A +LF +M   G+  D   Y + +DG  K G   +A  + + +     
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
             D+ +Y+ LI+GL K G  K   E FH+  R + L  D  T+N MI+A C +G +  A 
Sbjct: 399 GFDVVAYNVLINGLFKLG--KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M++ G+ P+ +  N L+       E  K ++LL+ M
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           ++ LI+G CR G    A+ L E M            PD V Y T+++G CK G +  AK+
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L+ ++   N+ P+V+TY ++I  +C +    +A  ++ EM  + + P+VVT++ IM+ LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K+GK+EEA  +   M ++GV PN F Y TL+D     G V  A  L   M   G   +V 
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ L++G  K      A  ++  +L + + P  VTY+ L  G  ++  V +   L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K+ + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
            IA +LF  +    L  +    +  ++ L   G+M++A +LF DM ++G+ PD V + ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           M G  +  + S    +   M E++
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKS 397



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 160/280 (57%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  F+V++D  C+NG++  A +LLE M   G  P+   YNTLM+GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + P VVTY  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ L+DGL K+G    A ++F  L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ME K + P+ + +++++ G  +    ++ ++++ +M +RN
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 193/399 (48%), Gaps = 7/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  + + G  P+ + Y+++++G  + G    A N+ +EM   +  F      D V
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF------DVV 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL K G  + ++     M+   + PD  T+N++I  +C   +   A +L  EM
Sbjct: 404 AYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PN +T ++++  LC  G++E+   LL  M+ +G  P    +  ++D    + R 
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +        +  MG K ++ +Y+ LI+ +C+   I  A  ++ +M+ KGI   ++TYN L
Sbjct: 523 DVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +++AF +  +M   GV+ +   Y   + GL     I EA  L   ++    
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  L+ G  K G +K   +L+  +     +    TYN++I       KM +A +
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           L  +M+ +G+ P+   ++ L+ G  + ++  ++ + L R
Sbjct: 703 LMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 191/402 (47%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K+ G E N     + +N L R+G    A  LF++M++     G++  PD V 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR----GLL--PDRVN 369

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT+++DG  K G    A  +  +M +K+   DVV YN +I G  +     E++     M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL-FKLGKYESESFHTGMR 428

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  TF+ +++  CK G +  A +LL  M   G++PN+   N L+   C  G + 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  +L   M  MG      ++  +++   K++  +  L  + +++  G+K  + TYNTL 
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLI 548

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  + RA  +F +M   G+ AD   Y   I G C + ++ +A  +   +      
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ L+ GL  +  +K A  L + +    L+ +  TY+I++      G M +   L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + +M  KG  P    +N L+    +  + S+  EL+  M  R
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 151/314 (48%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I   V  +N +I G+C   + + A  L   M  +G  P++VT++ +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P   +Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   +DGL K G    A ++F+ L       +  +YS LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  +V+ Y+ ++      G +++A D+   M  + + P+   + TL+ G  + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 391 TSKVVELLHRMDER 404
               ++L   M  R
Sbjct: 313 RGIALDLFKEMKSR 326



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 18/164 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++K  G  PN  TY  L++G  + G+    + L+ EMI      G V  P   
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
            Y  +I    K   + +AKEL+ +M+ + I P+  TY+ +I G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
               AKRLF EM ++G  P   T + I   L K GK  +A ++L
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 24/177 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---MINGNGEFGVVCKP 58
           +A A+ +++   G  PNV TY+ L+ GL        A  L +E   ++N   E G+V  P
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLS-------AARLIKEAAGLVNQMKERGLV--P 644

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A  Y  ++ G  K G + +  +L  +M  K   P   TYN +I  F      ++AK L 
Sbjct: 645 NATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELM 704

Query: 119 IEMMDQGVQPNVVTFSVI------------MDELCKNGKMEEASQLLELMIQIGVRP 163
            EM  +G+ PN  T+ ++            +++  K     EA +L E M + G  P
Sbjct: 705 QEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 205/389 (52%), Gaps = 7/389 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V+  + LI+GL  T  TI        ++  +G       PD + Y  II G C+ 
Sbjct: 87  GHKPDVVLCTKLIHGLF-TSKTIDKAIQVMHILENHGH------PDLIAYNAIITGFCRA 139

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A ++L +MK+K  +PD+VTYN +I   C     + A     +++ +  +P VVT+
Sbjct: 140 NRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTY 199

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++     G ++EA +LL+ M++I ++P+ F YN+++ G C  G V+RA ++  S+ S
Sbjct: 200 TILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS 259

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +V +Y+IL+ G     + E    L S+M+++G +  VVTY+ L   +    +VE 
Sbjct: 260 KGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
              L  +M++ G+  D + Y   I  LCK G +  A+E+   +    C  DI +Y+ ++ 
Sbjct: 320 GVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILA 379

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK  R   A  +F  L       +  +YN M  AL + G   +A  + L+M  KGV P
Sbjct: 380 CLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDP 439

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           D + +N+L+    R+    + +ELL  M+
Sbjct: 440 DGITYNSLISCLCRDGMVDEAIELLVDME 468



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 197/392 (50%), Gaps = 10/392 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++I Y+ +I G CR      A  + + M N          PD V Y  +I  LC  G 
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG------FSPDIVTYNILIGSLCSRGM 176

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A E   Q+  +N  P VVTY  +I         +EA +L  EM++  +QP++ T++ 
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+  +C+ G ++ A Q++  +   G  P+   YN L+ G    G+     EL   M + G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ NV +YS+LI+  C++ ++E  + L  +M  KG+KP    Y+ L   L +  +V+ A 
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++ D M   G   D   Y T +  LCK     EAL +F  L  + C  +  SY+ +   L
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416

Query: 316 CKSG-RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VA 372
             +G +++    +   L +GV   D +TYN +I  LC DG +D+A +L +DME +     
Sbjct: 417 WSTGHKVRALGMILEMLDKGV-DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECK 475

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           P  V++N ++LG  + +  S  +E+L  M ++
Sbjct: 476 PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDK 507



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 197/392 (50%), Gaps = 31/392 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
            A  +  ++K  G  P+++TY+ LI  LC  G    AL    +++  N +  VV      
Sbjct: 144 SAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILI 203

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                   +PD   Y +II G+C+EG+VD+A +++  +  K   
Sbjct: 204 EATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYA 263

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PDV+TYN ++RG            L  +M+ +G + NVVT+SV++  +C++GK+EE   L
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGL 323

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G++P+ + Y+ L+   C  GRV+ A E+   M S GC  ++ +Y+ ++   CK
Sbjct: 324 LKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK 383

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            K  + ALS++ ++   G  P   +YN++F  L+      RA  +  EM   GV  D   
Sbjct: 384 QKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGIT 443

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRI--LKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
           Y + I  LC++G + EA+EL   + +   +C+  + SY+ ++ GLCK  R+  A E+  +
Sbjct: 444 YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAA 503

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +       +  TY  +I  +   G ++ A DL
Sbjct: 504 MVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 172/373 (46%), Gaps = 8/373 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIY----TTIIDGL---CKEGFVDKAKELLLQMKDKN 90
            L +  E  N N     V KP         T ++  L   CK G  +++   L  + +K 
Sbjct: 28  TLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKG 87

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             PDVV    +I G   +   ++A ++   + + G  P+++ ++ I+   C+  +++ A 
Sbjct: 88  HKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAY 146

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           Q+L+ M   G  P+   YN L+   C  G ++ A E    +    CK  V +Y+ILI   
Sbjct: 147 QVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEAT 206

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                I+ A+ L  EML   ++P + TYN++  G+     V+RAF++   +   G A D 
Sbjct: 207 LLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDV 266

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   + GL   G      EL   +    CE ++ +YS LI  +C+ G+++    L   
Sbjct: 267 ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L  D   Y+ +I ALC +G++D A ++   M + G  PD V +NT++    +   
Sbjct: 327 MKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKR 386

Query: 391 TSKVVELLHRMDE 403
             + + +  ++ E
Sbjct: 387 ADEALSIFEKLGE 399



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 159/332 (47%), Gaps = 8/332 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++     +P++ TY+++I G+CR G+   A  +    I+  G       PD +
Sbjct: 214 EAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISS-ISSKGY-----APDVI 267

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GL  +G  +   EL+  M  +    +VVTY+ +I   C      E   L  +M
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+   +  ++  LCK G+++ A ++L++MI  G  P+   YNT++   C   R 
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F  +  +GC  N  SY+ + +          AL +  EML KG+ P  +TYN+L
Sbjct: 388 DEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSL 447

Query: 242 FIGLFEIHQVERAFKLFD--EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
              L     V+ A +L    EM+         +Y   + GLCK   + +A+E+   +   
Sbjct: 448 ISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDK 507

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            C  +  +Y+ LI+G+   G L  A +L  +L
Sbjct: 508 GCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+++ Y+T++  LC+      AL++FE++    GE G  C P+A  Y ++   L   
Sbjct: 366 GCVPDIVNYNTILACLCKQKRADEALSIFEKL----GEVG--CSPNASSYNSMFSALWST 419

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI--EMMDQGVQPNVV 131
           G   +A  ++L+M DK ++PD +TYNS+I   C     +EA  L +  EM     +P+VV
Sbjct: 420 GHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVV 479

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           ++++++  LCK  ++ +A ++L  M+  G RPN   Y  L++G    G +N A++L  ++
Sbjct: 480 SYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539

Query: 192 ESMGCKHNVFSYSILINGYCK 212
            +M       S+  L   +CK
Sbjct: 540 VNMDAISE-HSFERLYKTFCK 559



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 92/160 (57%), Gaps = 8/160 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F KL   GC PN  +Y+++ + L  TGH + AL +  EM++     GV   PD +
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDK----GV--DPDGI 442

Query: 62  IYTTIIDGLCKEGFVDKAKELL--LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y ++I  LC++G VD+A ELL  ++M+     P VV+YN V+ G C  +  ++A  +  
Sbjct: 443 TYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLA 502

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
            M+D+G +PN  T++ +++ +   G + +A  L   ++ +
Sbjct: 503 AMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 36/195 (18%)

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK      +L     +++KG KP VV    L  GLF    +++A ++   ++ HG     
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG----- 122

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
                                            D+ +Y+ +I G C++ R+  A+++   
Sbjct: 123 -------------------------------HPDLIAYNAIITGFCRANRIDSAYQVLDR 151

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +       D+VTYNI+I +LC+ G +D A +    +  +   P  V +  L+   +    
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211

Query: 391 TSKVVELLHRMDERN 405
             + ++LL  M E N
Sbjct: 212 IDEAMKLLDEMLEIN 226


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 202/401 (50%), Gaps = 8/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +A + F  +      P ++ +  ++  L +  H   A++L ++M + G        +P+ 
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKG-------IEPNL 87

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V    +I+  C  G +  +  +L ++      P+ +T  ++++G C   +  ++     +
Sbjct: 88  VTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDK 147

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG Q N V++  +++ LCK G+   A + L ++       N  +YNT++DG C    
Sbjct: 148 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKL 207

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A + +  M + G   NV +Y+ LI G+C   ++ GA SL +EM+ K I P V TY  
Sbjct: 208 VNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAI 267

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  +V+ A  L  EM   G  AD   Y + +DG CKN  + +A  LF  ++   
Sbjct: 268 LIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +  +Y+ LIDGLCK GRLK A +LF  L       DV TYN+MI  LC +G +D+A 
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +   ME  G  P+ V F  ++    + +E  K  +LLH M
Sbjct: 388 AIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 196/369 (53%), Gaps = 6/369 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  +++  G EPN++T + LIN  C  G    + ++  +++    + G   +P+ + 
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKIL----KLGY--QPNTIT 124

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            TT++ GLC +G V K+     ++  +    + V+Y +++ G C   ++  A +    + 
Sbjct: 125 LTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIE 184

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D     NVV ++ I+D LCK+  + EA      M   G+ PN   Y TL+ GFCL G++ 
Sbjct: 185 DSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLT 244

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M       NV++Y+ILI+  CK  +++ A +L +EM  +G    VVTY +L 
Sbjct: 245 GAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLL 304

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   +++A  LF +M+  G+  + + Y   IDGLCK G + +A +LF+ L +  C 
Sbjct: 305 DGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCC 364

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D+ +Y+ +I GLCK G L  A  +   +     I +VVT+ I+I +L    + DKA  L
Sbjct: 365 IDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKL 424

Query: 363 FLDMEAKGV 371
             +M AKG+
Sbjct: 425 LHEMIAKGL 433



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 35/255 (13%)

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  L   ME  G + N+ + +ILIN +C   ++  + S+  ++L  G +P  +T  TL  
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMK 130

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL    +V+++    D++   G   +  +Y T ++GLCK G    A++  R +      L
Sbjct: 131 GLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL 190

Query: 304 DIRSYSCLIDGLCK-----------------------------------SGRLKIAWELF 328
           ++  Y+ +IDGLCK                                   +G+L  A+ L 
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
           + +    +  +V TY I+I ALC +GK+ +A +L  +M  +G   D V + +L+ G  +N
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310

Query: 389 NETSKVVELLHRMDE 403
               K   L  +M E
Sbjct: 311 QNLDKATALFMKMKE 325



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 107/225 (47%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A   F  M  M     +  +  ++    K K    A+SL  +M  KGI+P +VT N 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L      + Q+  +F +  ++ + G   +T    T + GLC  G + +++     +    
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +++  SY  L++GLCK G  + A +    +       +VV YN +I  LC D  +++A+
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D + +M A+G+ P+ + + TL+ G     + +    LL+ M  +N
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKN 257


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 165/283 (58%), Gaps = 6/283 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+ +V+ ++TL+NGLCR G  + A  L + M+  NG      +P+ V Y TI++G+CK 
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVE-NGH-----QPNEVTYGTIVNGMCKM 58

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  D A  LL +M + +I  DVV Y ++I   C     ++A+ LF EM D+G+ PNV+T+
Sbjct: 59  GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C  GK  +A QLL  MI+  V P+   +N L++ F   G+++ A+EL+  M  
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
                +  +Y+ LI+G+CK+  ++ A  ++  M+SKG  P V+T NTL  G     +V+ 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
             KL  EM R G+  D+ +Y T I G C+ G +  A +LF+ +
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 145/281 (51%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M +K    DVV +N+++ G C      EA+ L   M++ G QPN VT+  I++ +CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            + A  LL  M +  ++ +  +Y  ++D  C  G  ++A+ LF  M   G   NV +Y+ 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G C   +   A  L  +M+   + P VVT+N L     +  ++  A +L+ EM    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  DT  Y + IDG CK+  + +A  +F  +       ++ + + LI G C++ R+    
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +L H + R  L+ D V+YN +IH  C  G ++ A DLF +M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 137/264 (51%), Gaps = 41/264 (15%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA AL  ++   G +PN +TY T++NG+C+ G T  ALNL  +M   +       K D 
Sbjct: 27  LEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESH------IKADV 80

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK------------------------------- 89
           VIYT IID LCK+G   KA+ L  +M DK                               
Sbjct: 81  VIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRD 140

Query: 90  ----NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
               N++PDVVT+N++I  F      +EA+ L+ EM+ + + P+ +T++ ++D  CK+ +
Sbjct: 141 MIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSR 200

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A  + +LM+  G  PN    NTL+ G C   RV+   +L   M   G   +  SY+ 
Sbjct: 201 LDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNT 260

Query: 206 LINGYCKNKEIEGALSLYSEMLSK 229
           LI+G+C+  ++  A  L+ EM+S+
Sbjct: 261 LIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 144/281 (51%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G Q +VV F+ +M+ LC+ G++ EA  L++ M++ G +PN   Y T+++G C  G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  L   M+    K +V  Y+ +I+  CK+     A +L++EM  KGI P V+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G     +   A +L  +M    V  D   +   I+   K G I EA EL+R +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LIDG CK  RL  A  +F  +       +V+T N +I   C   ++D   
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M  +G+ PD V++NTL+ G  +  + +   +L   M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 124/249 (49%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G + +   +NTLM+G C  GRV  A+ L   M   G + N  +Y  ++NG CK  +
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + AL+L  +M    IK  VV Y  +   L +     +A  LF EM   G+  +   Y  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            IDG C  G   +A +L R +     + D+ +++ LI+   K G++  A EL+  +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
           +  D +TYN +I   C   ++D A  +F  M +KG +P+ +  NTL+ GC R       +
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 396 ELLHRMDER 404
           +LLH M  R
Sbjct: 241 KLLHEMLRR 249



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 87/180 (48%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ KG +  VV +NTL  GL    +V  A  L D M  +G   +   Y T ++G+CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
              AL L R +     + D+  Y+ +ID LCK G    A  LF  +    +  +V+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           MI   C+ GK   A  L  DM    V PD V FN L+   ++  + S+  EL   M  RN
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++        V T++ ++N LC+ G    A      M       G+  KP+ V 
Sbjct: 211 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM------EGLGFKPNVVS 264

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G    G ++ A+ +L  M+ K I PD  TY S+I G C      EA  LF +M+
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 324

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN VT++ ++D  C  G +E A    + M++ G+ P+   YN L+    + GR+ 
Sbjct: 325 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 384

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G   +  +Y+ILINGY +    + A  L++EMLSKGI+PT VTY +L 
Sbjct: 385 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L   ++++ A  LF+++   GV+ D   +   +DG C NG +  A  L + +      
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +++ L+ G C+ G+++ A  L   + R  +  D ++YN +I      G +  A  +
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 564

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M + G  P  + +N L+    +N E     ELL  M
Sbjct: 565 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 6/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K  G  P + T + +++   +     +A  L+ EM      F +       
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM------FRLRISSTVY 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++ LCKEG + KA+E +  M+     P+VV+YN++I G+    +   A+R+   M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+  T+  ++  +CK G++EEAS L + M++IG+ PNA  YNTL+DG+C  G +
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA      M   G   +V +Y++L++       +  A  +  EM  KGI P  +TYN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       ++AF L +EM   G+      Y + I  L +   + EA +LF  +     
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  ++ ++DG C +G ++ A+ L   + R  +  D VT+N ++   C +GK+++A  
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L  +M+ +G+ PD +++NTL+ G  R  +
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGD 557



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 200/376 (53%), Gaps = 8/376 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIID 68
           ++  G +PNV++Y+T+I+G    G+   A  + + M + G        +PD+  Y ++I 
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG-------IEPDSYTYGSLIS 305

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G+CKEG +++A  L  +M +  + P+ VTYN++I G+C   D   A     EM+ +G+ P
Sbjct: 306 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 365

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V T+++++  L   G+M EA  +++ M + G+ P+A  YN L++G+   G   +A +L 
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 425

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S G +    +Y+ LI    +   ++ A  L+ ++L +G+ P V+ +N +  G    
Sbjct: 426 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCAN 485

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             VERAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  SY
Sbjct: 486 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISY 545

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M  
Sbjct: 546 NTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 605

Query: 369 KGVAPDCVAFNTLMLG 384
           KG++PD   + +L+ G
Sbjct: 606 KGISPDDSTYLSLIEG 621



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 35  TIVALN--LFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           T +A N  LF+E+        V     ++++  ++   C+    D+A +    MK+K I 
Sbjct: 133 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 189

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + T N ++  F   N    A  L+ EM    +   V TF+++++ LCK GK+++A + 
Sbjct: 190 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 249

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M  +G +PN   YNT++ G+   G +  A+ +  +M   G + + ++Y  LI+G CK
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  L+ +M+  G+ P  VTYNTL  G      +ERAF   DEM + G+      
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   +  L   G + EA ++ + +R      D  +Y+ LI+G  + G  K A++L + + 
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +    VTY  +I+ L    +M +A DLF  +  +GV+PD + FN ++ G   N    
Sbjct: 430 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 489

Query: 393 KVVELLHRMDERN 405
           +   LL  MD ++
Sbjct: 490 RAFMLLKEMDRKS 502



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 6/348 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  G EP+  TY +LI+G+C+ G    A  LF++M+    E G+V  P+AV 
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 334

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C +G +++A     +M  K I P V TYN ++          EA  +  EM 
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +T++++++   + G  ++A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  +   G   +V  ++ +++G+C N  +E A  L  EM  K + P  VT+NTL 
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +VE A  L DEM+R G+  D  +Y T I G  + G I +A  +   +  +   
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 574

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             + +Y+ LI  LCK+    +A EL   +    +  D  TY  +I  +
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 160/314 (50%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I+  V T+N ++   C      +A+     M   G +PNVV+++ I+      G +E A 
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++L+ M   G+ P+++ Y +L+ G C  GR+  A  LF  M  +G   N  +Y+ LI+GY
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   ++E A S   EM+ KGI P+V TYN L   LF   ++  A  +  EM++ G+  D 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I+G  + G   +A +L   +     E    +Y+ LI  L +  R+K A +LF  
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  DV+ +N M+   CA+G +++A  L  +M+ K V PD V FNTLM G  R  +
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 391 TSKVVELLHRMDER 404
             +   LL  M  R
Sbjct: 523 VEEARMLLDEMKRR 536



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 159/316 (50%), Gaps = 29/316 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA+ LF K+   G  PN +TY+TLI+G C  G    A +  +EM+               
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 50  ---------GEFGVVCK--------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                    GE   + K        PDA+ Y  +I+G  + G   KA +L  +M  K I 
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTY S+I      N   EA  LF +++DQGV P+V+ F+ ++D  C NG +E A  L
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 494

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M +  V P+   +NTLM G C  G+V  A+ L   M+  G K +  SY+ LI+GY +
Sbjct: 495 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I+ A  +  EMLS G  PT++TYN L   L +  + + A +L  EM   G++ D   
Sbjct: 555 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614

Query: 273 YRTFIDGLCKNGYIVE 288
           Y + I+G+     +VE
Sbjct: 615 YLSLIEGMGNVDTLVE 630


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 189/384 (49%), Gaps = 6/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+K  G +P+++T  +L+ G C  G    AL L+ EM  G G       P+ V
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM-PGKG-----FPPNEV 469

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ G  K+   DKA  LL +M    ++    TYN +I G C  +   E   +    
Sbjct: 470 TYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRF 529

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +T++ I++   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 530 VSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCC 589

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L + M   G   ++ +Y+  IN +CK   +  AL     +L  G+ P V  YN+ 
Sbjct: 590 DLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSF 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +  A K +  M +  +AADT  Y T IDG  K G +  ALEL+  +     
Sbjct: 650 VTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHN 709

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D ++++ L  GLC+SG +  A  L   + R  +  + VTYN++I+A   DGK+ +A  
Sbjct: 710 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQ 769

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGC 385
           L   M + GV PD   +N   L C
Sbjct: 770 LHDKMLSSGVVPDDTTYNIFPLTC 793



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 169/352 (48%), Gaps = 4/352 (1%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           GVV  PDA   T ++    +      A  L  +M+ K    D   Y+ V+R         
Sbjct: 148 GVV--PDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHG 205

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A RLF EM   GV+P+   +++ +  LCK    + A Q+L  M + G++P  F YN+++
Sbjct: 206 DAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVV 265

Query: 173 DGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           D     GR++ A  L   M  + G K +VF  + L+ GYC + EI  AL L+ E +  G+
Sbjct: 266 DVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGV 325

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            PT VTY  L  G       +  +KL  +M   G+   T+ +   I GL +N    +A+ 
Sbjct: 326 TPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIA 385

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  L +     D+ +Y CLI  L K  ++  A  L+  +    +   +VT + ++   C
Sbjct: 386 LF-DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYC 444

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G MD+A  L+ +M  KG  P+ V + TLM G I+     K   LL+ M +
Sbjct: 445 EKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQ 496



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 192/405 (47%), Gaps = 10/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV-ALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF +++  G   +   Y  ++   C  G     A+ LF+EM       G   KPD 
Sbjct: 171 DALTLFDEMRCKGYYADAKMYDVVMRA-CVVGRMHGDAVRLFDEMA------GAGVKPDE 223

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y   I GLCK    D+A ++L +M++  + P   TYNSV+         +EA RL  +
Sbjct: 224 RVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQ 283

Query: 121 MM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+   G + +V   + +M   C +G++ +A  L +  ++ GV P    Y  L+ G    G
Sbjct: 284 MLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEG 343

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
             +   +L   M   G   + + ++++I G  +NK+ E A++L+  ++  G+ P V TY 
Sbjct: 344 MTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYG 402

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L   L + H+V  A  L+D+M+  GV        + + G C+ G + EAL+L+  +   
Sbjct: 403 CLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGK 462

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  +Y+ L+ G  K      A+ L + + +  +     TYNI+I+ LC   ++ + 
Sbjct: 463 GFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEV 522

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++     ++G  P  + +N+++ G ++       + +  +M E+
Sbjct: 523 DEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEK 567


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 203/378 (53%), Gaps = 12/378 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  G  PN+ TY+ L++   +  +   AL  + +++    + G+V  P+ V
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDV 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+TT+IDGLCK   + +AK + L M    + P V  YNS+I G   +  + EA   F E+
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+  T S+++  LC  G+M+ A++ LE+M Q G+  NA  YN L+D +C +G +
Sbjct: 340 IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A      M  +G + NV +YS LI+G+ KN E+E A+++Y+EM++KG++P VVTY  L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ AF L  EM+  G+ ++       +DGLC+   + +A+         K 
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKK 519

Query: 302 E------LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                   +  +Y  LI GL   G+   A   F  +    ++ D  TY ++I  LC  G 
Sbjct: 520 SEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGY 579

Query: 356 MDKAHDLFLDMEAKGVAP 373
           +  A  L+ DM   GV P
Sbjct: 580 VLNAMMLYADMVKVGVKP 597



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 207/397 (52%), Gaps = 9/397 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F +L+     P +   + +++GL +         LF+EM+ G G       P  V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEML-GRGMV-----PSVV 174

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+    +G V KA E+  QM  + I+P+VVTY ++I   C  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEM 234

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN+ T++ +M    K   ++ A      +++ G+ PN  ++ TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRI 294

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F+ M        V  Y+ LI+G  ++   + AL+ + E++ K ++P   T + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIV 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q++ A +  + MQ+ G+A +  AY   ID  CK+G + EAL     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E ++ +YS LIDG  K+G ++IA  ++  +    +  +VVTY  +IH    +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           L  +ME KG+  + +  + L+ G  R N     V  +
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI 511



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 164/340 (48%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            I+DGL K   + +  EL  +M  + + P VVTYN++I    +  D  +A  ++ +M+ +
Sbjct: 143 AILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNVVT++ ++  LC+   + +A  L   M + G+RPN + YN LM        +  A
Sbjct: 203 RIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHA 262

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              +  +   G   N   ++ LI+G CK   I  A +++ +M    + PTV  YN+L  G
Sbjct: 263 LVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            F     + A   F E+ R  +  D +     + GLC  G +  A      ++     L+
Sbjct: 323 AFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
             +Y+ LID  CKSG L  A      +    +  +VVTY+ +I     +G+M+ A  ++ 
Sbjct: 383 AAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYT 442

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +M AKGV P+ V +  L+ G  +N +      L   M+E+
Sbjct: 443 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEK 482



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 129/276 (46%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P +   + I+D L K   +    +L + M+  G+ P+   YNTL++     G V +A E+
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +  M +     NV +Y+ +I   C+   I  A  L+ EM   G++P + TYN L    F+
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
              ++ A   + ++ + G+  +   + T IDGLCK   I EA  +F  +   +    +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LI G  +SG  + A   F  + R  L  D  T +I++  LC  G+M  A      M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G+A +  A+N L+    ++    + +    RM E
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 47/274 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A F ++      P+  T S ++ GLC  G   VA    E M     + G+    +A 
Sbjct: 331 EALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVM----QQSGIAL--NAA 384

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID  CK G +D+A     +M +  + P+VVTY+S+I G     +   A  ++ EM
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM 444

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           + +GV+PNVVT++ ++    KNG M+ A  L + M + G+  NA   + L+DG C     
Sbjct: 445 VAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRV 504

Query: 177 ------------------------------------LTGRVNRAKELFVSMESMGCKHNV 200
                                               + G+ N A   F  M   G   + 
Sbjct: 505 QDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDR 564

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F+Y+++I G C    +  A+ LY++M+  G+KPT
Sbjct: 565 FTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 218/440 (49%), Gaps = 44/440 (10%)

Query: 2   EAAALFTKLKAFGCE-PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A ++  K+K   C  PN +TY+T++N   + G    AL + ++M   NG      + D 
Sbjct: 248 KAESMLQKMK--NCRLPNAVTYNTILNWYVKKGRCKSALRILDDM-EKNG-----IEADL 299

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +ID LCK     +A  LL +M++ N+ PD  +YN++I GF      N A  +F +
Sbjct: 300 YTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQ 359

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ Q ++P+V T++ ++D  C+NG+ +EA ++L  M   GVRP+   Y+ L++G+C   +
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSK 419

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +L   + S     N   Y+ILI+G+C+  E+  A  +   ML+ GI P V+TY+ 
Sbjct: 420 LGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSA 479

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF------- 293
           L  G+ ++  +    ++   MQ+ GV  +   Y T +   CK G+  EAL+ F       
Sbjct: 480 LINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSG 539

Query: 294 ----------------------------RTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                                       + +  +K   D+ S++C+ID  C+ G +  A+
Sbjct: 540 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 599

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            ++ ++ R     D+ TY  ++  LC  G + +A +  + +  K  A D    NTL++G 
Sbjct: 600 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 659

Query: 386 IRNNETSKVVELLHRMDERN 405
            ++    + ++L  +M  RN
Sbjct: 660 CKHGTLDEALDLCEKMVTRN 679



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G  P+ +TYS L+NG C+      AL+L + + + +         +  
Sbjct: 387 EARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI------NRT 440

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT +IDG C+ G V KAK++L  M    I+PDV+TY+++I G C     +E K +   M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V ++ ++   CK G  +EA +    + + G+  N+ ++N L+  F   G +
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A++    M  M    +V S++ +I+ YC+   +  A S+Y  M+  G  P + TY +L
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   + +A +    +     A D     T + G+CK+G + EAL+L   +     
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ L+DG CK G++  A  L   +    L+ D + Y  +++ L  +G++  A  
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 362 LFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +F ++  K G+  DC+A+N++M G ++  + +++  L+  M E
Sbjct: 741 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 783



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 207/401 (51%), Gaps = 23/401 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA +++  +   G  P++ TY +L+ GLC+ GH + A      ++         C  D 
Sbjct: 596 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK------ACAIDE 649

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
               T++ G+CK G +D+A +L  +M  +NI PD  TY  ++ GFC       A  L   
Sbjct: 650 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQM 709

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+++G+ P+ + ++ +++ L   G+++ AS +  E++ + G+  +   YN++M+G+   G
Sbjct: 710 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 769

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N  + L  +M       +  SY+IL++GY K  ++   L LY +M+ +GIKP  VTY 
Sbjct: 770 QINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYR 829

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-- 297
            L  GL E   +E A K  ++M   GV  D  A+   I    +   +  AL+LF  ++  
Sbjct: 830 LLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWV 889

Query: 298 -----ILKCELDIRSY---------SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
                  + + D+++          S ++ GLCK G+++ A  +F S+ R  ++  + T+
Sbjct: 890 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 949

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             ++H LC + K+D A  L   ME+ G+  D V +N L+ G
Sbjct: 950 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 990



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 194/389 (49%), Gaps = 8/389 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-LFEEMINGNGEFGVVCKPDAV 61
           A  +F ++     +P+V TY+ LI+G CR G T  A   L+E  I G        +P  +
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITG-------VRPSEL 405

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +++G CK   +  A +L+  ++ ++I+ +   Y  +I GFC   + ++AK++   M
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+V+T+S +++ +CK G + E  ++L  M + GV PN  +Y TL+  FC  G  
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA 525

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A + FV +   G   N   ++ L+  + +   I  A      M    I   V ++N +
Sbjct: 526 KEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCI 585

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +   V  AF ++D M RHG   D   Y + + GLC+ G++V+A E    L    C
Sbjct: 586 IDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKAC 645

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +D ++ + L+ G+CK G L  A +L   +    ++ D  TY I++   C  GK+  A  
Sbjct: 646 AIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALI 705

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L   M  KG+ PD +A+  L+ G +   +
Sbjct: 706 LLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 734



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 178/346 (51%), Gaps = 4/346 (1%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D      +++ LC +G + KA+ +L +MK+  + P+ VTYN+++  +        A R+ 
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G++ ++ T+++++D+LCK  +   A  LL+ M ++ + P+   YNTL+ GF   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++N A  +F  M     K +V +Y+ LI+GYC+N   + A  +  EM   G++P+ +TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           + L  G  +  ++  A  L   ++   ++ +   Y   IDG C+ G + +A ++ + +  
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D+ +YS LI+G+CK G +    E+   + +  ++ + V Y  ++   C  G   +
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
           A   F+D+   G+  + V  N L+    R     E  +  + + RM
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 186/390 (47%), Gaps = 23/390 (5%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  L  K+      P+  TY+ L++G C+ G  + AL L + M+    E G+V  PD +
Sbjct: 667  EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML----EKGLV--PDTI 720

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +++GL  EG V  A  +  ++  K  +  D + YNS++ G+      NE +RL   
Sbjct: 721  AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 780

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M +  V P+  +++++M    K G++     L   M++ G++P+   Y  L+ G C  G 
Sbjct: 781  MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 840

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS---------------- 224
            +  A +    M   G   +  ++ ILI  + +  ++  AL L+S                
Sbjct: 841  IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE 900

Query: 225  EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            +M + G+ P+ V  +++  GL +  +VE A  +F  + R G+      + T + GLCK  
Sbjct: 901  DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 285  YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
             I +A  L + +     ++D+ +Y+ LI GLC    +  A +L+  +    L+ ++ TY 
Sbjct: 961  KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 345  IMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             +  A+ A G M     L  D+E +G+ P 
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 1/338 (0%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++   KEG V  A   +  M +      + + N+++      N S        E +D+ 
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              +V T +++++ LC  GK+ +A  +L+ M    + PNA  YNT+++ +   GR   A 
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSAL 284

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +   ME  G + ++++Y+I+I+  CK K    A  L   M    + P   +YNTL  G 
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
           F   ++  A  +F++M R  +      Y   IDG C+NG   EA  +   ++I       
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSE 404

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +YS L++G CK  +L  A +L   L    +  +   Y I+I   C  G++ KA  +   
Sbjct: 405 LTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKC 464

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M A G+ PD + ++ L+ G  +     +  E+L RM +
Sbjct: 465 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 502



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 207/422 (49%), Gaps = 26/422 (6%)

Query: 1   MEAAALFTKLKAFGCEP-------NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG 53
           + + A +++L A    P        V+  +T ++G+  +  T++A+  +E +     + G
Sbjct: 22  VSSPAYWSRLPARARPPAHTRIGAGVLPAATSVHGVESSIITVLAMQRWETLSQMAYKSG 81

Query: 54  VVCKPDAVIYTTIIDGLCKEGFVDK-------AKELLLQMKDKNINPDVVTYNSVIRGFC 106
            + K    +   ++D + ++  +D+       A  +L+Q +  +    V+ + ++    C
Sbjct: 82  KLDKAHGKLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSC 141

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
            A  S+      +  + +    N+ +  ++++   K GK+ +A+  +  M + G + + F
Sbjct: 142 SAIFSS-----LLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLF 196

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKH--NVFSYSILINGYCKNKEIEGALSLY 223
             N +++   L G +N+++ +++ + ES+  K   +V + +I++N  C   ++  A S+ 
Sbjct: 197 SCNNILNA--LVG-INKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML 253

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M +  + P  VTYNT+     +  + + A ++ D+M+++G+ AD + Y   ID LCK 
Sbjct: 254 QKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKL 312

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
                A  L + +R +    D  SY+ LI G    G++ +A  +F+ + R  L   V TY
Sbjct: 313 KRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATY 372

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +I   C +G+ D+A  +  +M+  GV P  + ++ L+ G  ++++    ++L+  +  
Sbjct: 373 TALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRS 432

Query: 404 RN 405
           R+
Sbjct: 433 RS 434


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 207/435 (47%), Gaps = 44/435 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV-CKPDAV 61
           A  L   +K  G  P+++TY+TL+NG C+ G    A  L        GE  +V  +P+ +
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM-------GEISLVNLEPNVI 88

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+ID  CK   ++ A  +  +M  K++ PDVVTY  ++ G C +    EAK +F EM
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 122 MDQGVQPN-----------------------------------VVTFSVIMDELCKNGKM 146
            + GV PN                                   VV ++ +MD L K G  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A  + +++++  + PN   Y+ L+DG C  G VN+ + L   ME      NV  YS +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++GY K   +  A+ +  +M+ + I P V  Y TL  G F+  Q   A  LF EM+  G+
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             + +   +F++ L ++G + EA ELF+ +       D  +Y+ ++DG  K+G+   A+ 
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFN 388

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +   +       DVV YN++I+ L   GK + +      M   G+APD   FNT++    
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447

Query: 387 RNNETSKVVELLHRM 401
           +       ++LL+ M
Sbjct: 448 KEGNLGNALKLLNEM 462



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 212/401 (52%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++      P+V+TY+ ++NGLC++G    A ++F EM     E GVV  P+  
Sbjct: 105 DALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM----EEVGVV--PNRF 158

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+ID L KEG V +A  L  +M  + I  DVV Y +++ G   A  +N A+ +F  +
Sbjct: 159 SYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVL 218

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN VT+S ++D  CK G + +   LL+ M +  + PN  VY++++DG+   G +
Sbjct: 219 LEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLL 278

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A ++   M       NVF Y  LI+GY K  +   AL L+ EM S+G++      ++ 
Sbjct: 279 NEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSF 338

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    ++E A +LF +M   G+  D   Y + +DG  K G   +A  + + +     
Sbjct: 339 VNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSS 398

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAH 360
             D+ +Y+ LI+GL K G  K   E FH+  R + L  D  T+N MI+A C +G +  A 
Sbjct: 399 GFDVVAYNVLINGLFKLG--KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNAL 456

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L  +M++ G+ P+ +  N L+       E  K ++LL+ M
Sbjct: 457 KLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM 497



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           ++ LI+G CR G    A+ L E M            PD V Y T+++G CK G +  AK+
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLFTAKK 73

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L+ ++   N+ P+V+TY ++I  +C +    +A  ++ EM  + + P+VVT++ IM+ LC
Sbjct: 74  LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K+GK+EEA  +   M ++GV PN F Y TL+D     G V  A  L   M   G   +V 
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ L++G  K      A  ++  +L + + P  VTY+ L  G  ++  V +   L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K+ + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
            IA +LF  +    L  +    +  ++ L   G+M++A +LF DM ++G+ PD V + ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           M G  +  + S    +   M E++
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKS 397



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 160/280 (57%)

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  F+V++D  C+NG++  A +LLE M   G  P+   YNTLM+GFC  G +  AK
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + P VVTY  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ L+DGL K+G    A ++F  L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ME K + P+ + +++++ G  +    ++ ++++ +M +RN
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  + + G  P+ + Y+++++G  + G    A N+ +EM   +  F      D V
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF------DVV 403

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GL K G  + ++     M+   + PD  T+N++I  +C   +   A +L  EM
Sbjct: 404 AYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PN +T ++++  LC  G++E+   LL  M+ +G  P    +  ++D    + R 
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   +  MG K ++ +Y+ LI+ +C+   I  A  ++ +M+ KGI   ++TYN L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +++AF +  +M   GV+ +   Y   + GL     I EA  L   ++    
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  L+ G  K G +K   +L+  +     +    TYN++I       KM +A +
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKE 702

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           L  +M+ +G+ P+   ++ L+ G  + ++  ++ + L R
Sbjct: 703 LMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKR 741



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 192/402 (47%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++K+ G E N     + +N L R+G    A  LF++M++     G++  PD V 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR----GLL--PDRVN 369

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT+++DG  K G    A  +  +M +K+   DVV YN +I G  +     E++     M 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL-FKLGKYESESFHTGMR 428

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  TF+ +++  CK G +  A +LL  M   G++PN+   N L+   C  G + 
Sbjct: 429 QLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +  +L   M  MG      ++  +++   K++  +  L ++ +++  G+K  + TYNTL 
Sbjct: 489 KTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLI 548

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  + RA  +F +M   G+ AD   Y   I G C + ++ +A  +   +      
Sbjct: 549 STFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVS 608

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +Y+ L+ GL  +  +K A  L + +    L+ +  TY+I++      G M +   L
Sbjct: 609 PNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL 668

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + +M  KG  P    +N L+    +  + S+  EL+  M  R
Sbjct: 669 YCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 151/314 (48%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           I   V  +N +I G+C   + + A  L   M  +G  P++VT++ +M+  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P   +Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   +DGL K G    A ++F+ L       +  +YS LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +    +  +V+ Y+ ++      G +++A D+   M  + + P+   + TL+ G  + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 391 TSKVVELLHRMDER 404
               ++L   M  R
Sbjct: 313 RGIALDLFKEMKSR 326



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 18/164 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA L  ++K  G  PN  TY  L++G  + G+    + L+ EMI      G V  P   
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE-------- 113
            Y  +I    K   + +AKEL+ +M+ + I P+  TY+ +I G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
               AKRLF EM ++G  P   T + I   L K GK  +A ++L
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 24/177 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---MINGNGEFGVVCKP 58
           +A A+ +++   G  PNV TY+ L+ GL        A  L +E   ++N   E G+V  P
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLS-------AARLIKEAAGLVNQMKERGLV--P 644

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A  Y  ++ G  K G + +  +L  +M  K   P   TYN +I  F      ++AK L 
Sbjct: 645 NATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELM 704

Query: 119 IEMMDQGVQPNVVTFSVI------------MDELCKNGKMEEASQLLELMIQIGVRP 163
            EM  +G+ PN  T+ ++            +++  K     EA +L E M + G  P
Sbjct: 705 QEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++        V T++ ++N LC+ G    A      M       G+  KP+ V 
Sbjct: 233 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM------EGLGFKPNVVS 286

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y TII G    G ++ A+ +L  M+ K I PD  TY S+I G C      EA  LF +M+
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 346

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN VT++ ++D  C  G +E A    + M++ G+ P+   YN L+    + GR+ 
Sbjct: 347 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 406

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++   M   G   +  +Y+ILINGY +    + A  L++EMLSKGI+PT VTY +L 
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L   ++++ A  LF+++   GV+ D   +   +DG C NG +  A  L + +      
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +++ L+ G C+ G+++ A  L   + R  +  D ++YN +I      G +  A  +
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 586

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M + G  P  + +N L+    +N E     ELL  M
Sbjct: 587 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 202/389 (51%), Gaps = 6/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K  G  P + T + +++   +     +A  L+ EM      F +       
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM------FRLRISSTVY 250

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +++ LCKEG + KA+E +  M+     P+VV+YN++I G+    +   A+R+   M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+  T+  ++  +CK G++EEAS L + M++IG+ PNA  YNTL+DG+C  G +
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA      M   G   +V +Y++L++       +  A  +  EM  KGI P  +TYN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       ++AF L +EM   G+      Y + I  L +   + EA +LF  +     
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+  ++ ++DG C +G ++ A+ L   + R  +  D VT+N ++   C +GK+++A  
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           L  +M+ +G+ PD +++NTL+ G  R  +
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGD 579



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 200/376 (53%), Gaps = 8/376 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIID 68
           ++  G +PNV++Y+T+I+G    G+   A  + + M + G        +PD+  Y ++I 
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG-------IEPDSYTYGSLIS 327

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G+CKEG +++A  L  +M +  + P+ VTYN++I G+C   D   A     EM+ +G+ P
Sbjct: 328 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 387

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V T+++++  L   G+M EA  +++ M + G+ P+A  YN L++G+   G   +A +L 
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 447

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S G +    +Y+ LI    +   ++ A  L+ ++L +G+ P V+ +N +  G    
Sbjct: 448 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCAN 507

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             VERAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  SY
Sbjct: 508 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISY 567

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M  
Sbjct: 568 NTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 627

Query: 369 KGVAPDCVAFNTLMLG 384
           KG++PD   + +L+ G
Sbjct: 628 KGISPDDSTYLSLIEG 643



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 35  TIVALN--LFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           T +A N  LF+E+        V     ++++  ++   C+    D+A +    MK+K I 
Sbjct: 155 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 211

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P + T N ++  F   N    A  L+ EM    +   V TF+++++ LCK GK+++A + 
Sbjct: 212 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 271

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M  +G +PN   YNT++ G+   G +  A+ +  +M   G + + ++Y  LI+G CK
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  L+ +M+  G+ P  VTYNTL  G      +ERAF   DEM + G+      
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   +  L   G + EA ++ + +R      D  +Y+ LI+G  + G  K A++L + + 
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +    VTY  +I+ L    +M +A DLF  +  +GV+PD + FN ++ G   N    
Sbjct: 452 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 511

Query: 393 KVVELLHRMDERN 405
           +   LL  MD ++
Sbjct: 512 RAFMLLKEMDRKS 524



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 6/348 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  G EP+  TY +LI+G+C+ G    A  LF++M+    E G+V  P+AV 
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 356

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C +G +++A     +M  K I P V TYN ++          EA  +  EM 
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +T++++++   + G  ++A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  +   G   +V  ++ +++G+C N  +E A  L  EM  K + P  VT+NTL 
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +VE A  L DEM+R G+  D  +Y T I G  + G I +A  +   +  +   
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 596

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             + +Y+ LI  LCK+    +A EL   +    +  D  TY  +I  +
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 163/323 (50%)

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           L  +M    I+  V T+N ++   C      +A+     M   G +PNVV+++ I+    
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
             G +E A ++L+ M   G+ P+++ Y +L+ G C  GR+  A  LF  M  +G   N  
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+GYC   ++E A S   EM+ KGI P+V TYN L   LF   ++  A  +  EM
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           ++ G+  D   Y   I+G  + G   +A +L   +     E    +Y+ LI  L +  R+
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           K A +LF  +    +  DV+ +N M+   CA+G +++A  L  +M+ K V PD V FNTL
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 382 MLGCIRNNETSKVVELLHRMDER 404
           M G  R  +  +   LL  M  R
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRR 558



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 159/316 (50%), Gaps = 29/316 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA+ LF K+   G  PN +TY+TLI+G C  G    A +  +EM+               
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 50  ---------GEFGVVCK--------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                    GE   + K        PDA+ Y  +I+G  + G   KA +L  +M  K I 
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTY S+I      N   EA  LF +++DQGV P+V+ F+ ++D  C NG +E A  L
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 516

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M +  V P+   +NTLM G C  G+V  A+ L   M+  G K +  SY+ LI+GY +
Sbjct: 517 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I+ A  +  EMLS G  PT++TYN L   L +  + + A +L  EM   G++ D   
Sbjct: 577 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636

Query: 273 YRTFIDGLCKNGYIVE 288
           Y + I+G+     +VE
Sbjct: 637 YLSLIEGMGNVDTLVE 652


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 207/448 (46%), Gaps = 54/448 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  +K F C+P+V TY+T+++ + R    ++AL ++  M+  N      C P+  
Sbjct: 144 KAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN------CLPNIA 197

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +IDG+CK G    A ++  +M  + I P+ +TY  +I G C A  ++ A RLFI M
Sbjct: 198 TFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAM 257

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-------------------------- 155
            D G  P+ VT++ ++   CK G+++EA  LL+                           
Sbjct: 258 KDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRF 317

Query: 156 ---------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                    M +  ++P+  +Y  +M G    G+   A  L   M   G   +   Y+ L
Sbjct: 318 EDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNAL 377

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I GYC    ++ A SL+ E+       +  TY  L  G+     V  A ++F+EM++HG 
Sbjct: 378 IKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGC 437

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE-------------LDIRSYSCLID 313
                 +   IDG CK G I +A  LF  + I +               LD  S   +++
Sbjct: 438 YPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVE 497

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LC SG +  A+ +   L       +++TYNI+IH  C  G ++ A  LF +++ KG++P
Sbjct: 498 QLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSP 557

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V + TL+ G +  N       +L ++
Sbjct: 558 DSVTYGTLINGLLSANREEDAFTVLDQI 585



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 208/437 (47%), Gaps = 42/437 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVV-- 55
           A  ++ ++    C PN+ T+S LI+G+C++G T  AL +F+EM     +     + ++  
Sbjct: 180 ALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIIS 239

Query: 56  ----------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                                 C PD+V Y  ++ G CK G VD+A  LL   +      
Sbjct: 240 GLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVL 299

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           D   Y+ +I G   A    +A+  + +M +  ++P+V+ ++++M  L K GK ++A +LL
Sbjct: 300 DKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLL 359

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             M + G+ P+   YN L+ G+C  G ++ AK L + +    C  +  +Y+ILI G C++
Sbjct: 360 NEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRS 419

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM------------ 261
             +  A  +++EM   G  P+VVT+N L  G  +   +E+A  LF +M            
Sbjct: 420 GLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRL 479

Query: 262 -QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
            Q      DT + +T ++ LC +G I++A  +   L       +I +Y+ LI G CK+G 
Sbjct: 480 SQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGN 539

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A++LF  L    L  D VTY  +I+ L +  + + A  +   +   G  P    + +
Sbjct: 540 INGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKS 599

Query: 381 LMLGCIRNNETSKVVEL 397
            M    R N+ +    L
Sbjct: 600 FMTWSCRRNKITLAFSL 616



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 216/449 (48%), Gaps = 56/449 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   + K+     +P+VI Y+ ++ GL + G    AL L  EM     E G+V  PD  
Sbjct: 319 DAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT----ERGLV--PDTH 372

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G +D+AK L L++   +      TY  +I G C +    +A+++F EM
Sbjct: 373 CYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEM 432

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV-------------- 167
              G  P+VVTF+ ++D  CK G +E+A QLL   ++IG  P+ F+              
Sbjct: 433 EKHGCYPSVVTFNALIDGFCKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTAS 491

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             T+++  C +G + +A  + + +   G   N+ +Y+ILI+G+CK   I GA  L+ E+ 
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG+ P  VTY TL  GL   ++ E AF + D++ ++G    T  Y++F+   C+   I 
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKIT 611

Query: 288 EALELF---------RTLRILKC------------------ELDIR-------SYSCLID 313
            A  L+         R   +LK                   E+D +        Y+  + 
Sbjct: 612 LAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLI 671

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLC++GRL+ A ++F +L    ++    +   +I+ L   G +D A ++FL    KG   
Sbjct: 672 GLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYML 731

Query: 374 DCVAFNTLMLGCIRN-NETSKVVELLHRM 401
                N L+   +R+ ++ ++  +LL RM
Sbjct: 732 MPRICNRLLKSLLRSEDKRNRAFDLLSRM 760



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 181/399 (45%), Gaps = 12/399 (3%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A+ F +L+++      ++++ +I+ L +         L+ +++      G     DA  +
Sbjct: 82  ASKFRRLRSW------VSHNMIIDMLIKDN----GFELYWQVLKEIKRCGFSISADA--F 129

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           T +I    K   ++KA E    MKD +  PDV TYN+V+           A  ++  M+ 
Sbjct: 130 TVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLK 189

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
               PN+ TFS+++D +CK+GK + A Q+ + M Q  + PN   Y  ++ G C   + + 
Sbjct: 190 LNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADV 249

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A  LF++M+  GC  +  +Y+ L++G+CK   ++ AL L               Y+ L  
Sbjct: 250 AYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLID 309

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GLF   + E A   + +M  H +  D   Y   + GL K G   +AL L   +       
Sbjct: 310 GLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVP 369

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           D   Y+ LI G C  G L  A  L   + +    +   TY I+I  +C  G +  A  +F
Sbjct: 370 DTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIF 429

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            +ME  G  P  V FN L+ G  +     K   L ++M+
Sbjct: 430 NEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME 468



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 156/343 (45%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  IID L K+   +   ++L ++K    +     +  +I+ +   +   +A   F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D   +P+V T++ ++  + +   +  A  +   M+++   PN   ++ L+DG C +G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A ++F  M       N  +Y+I+I+G C+ ++ + A  L+  M   G  P  VTYN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ +V+ A  L    ++     D   Y   IDGL +     +A   +R +    
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D+  Y+ ++ GL K+G+ K A  L + +    L+ D   YN +I   C  G +D+A 
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            L L++           +  L+ G  R+       ++ + M++
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEK 434



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 154/330 (46%), Gaps = 17/330 (5%)

Query: 81  ELLLQMKDKNINPDVVTY------NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           E  L+ K   ++P +VTY      NS++ GF +   +++ +RL           + V+ +
Sbjct: 47  EPALESKVPFLSPSIVTYIIKNPPNSLL-GFRFFIWASKFRRL----------RSWVSHN 95

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +I+D L K+   E   Q+L+ + + G   +A  +  L+  +     + +A E F  M+  
Sbjct: 96  MIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDF 155

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
            CK +VF+Y+ +++   + + +  AL +Y+ ML     P + T++ L  G+ +  + + A
Sbjct: 156 DCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNA 215

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            ++FDEM +  +  +   Y   I GLC+      A  LF  ++   C  D  +Y+ L+ G
Sbjct: 216 LQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHG 275

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            CK GR+  A  L     +   + D   Y+ +I  L    + + A   +  M    + PD
Sbjct: 276 FCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPD 335

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +  +M G  +  +    + LL+ M ER
Sbjct: 336 VILYTIMMKGLSKAGKFKDALRLLNEMTER 365



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 6/207 (2%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           ++++LI  Y K   IE A+  +  M     KP V TYNT+   +     V  A  +++ M
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRM 187

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL---RILKCELDIRSYSCLIDGLCKS 318
            +     +   +   IDG+CK+G    AL++F  +   RIL  ++   +Y+ +I GLC++
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI---TYTIIISGLCQA 244

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            +  +A+ LF ++     I D VTYN ++H  C  G++D+A  L    E      D   +
Sbjct: 245 QKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGY 304

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
           + L+ G  R            +M E N
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHN 331



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 28/286 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  +  +L   G  PN+ITY+ LI+G C+ G+   A  LF+E+ + G         PD
Sbjct: 506 LKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG-------LSPD 558

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +V Y T+I+GL      + A  +L Q+      P    Y S +   C  N    A  L++
Sbjct: 559 SVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWL 618

Query: 120 EMMDQ--GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF---VYNTLMDG 174
           + +    G    V+     ++E  + G++EEA + L   +++  + N F    Y   + G
Sbjct: 619 KYLRSIPGRDSEVLK---SVEENFEKGEVEEAVRGL---LEMDFKLNDFQLAPYTIWLIG 672

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVF----SYSILINGYCKNKEIEGALSLYSEMLSKG 230
            C  GR+  A ++F ++E    +HNV     S   LI    K   ++ A  ++   + KG
Sbjct: 673 LCQAGRLEEALKIFFTLE----EHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKG 728

Query: 231 IKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRT 275
                   N L   L     +  RAF L   M+  G   D+  ++T
Sbjct: 729 YMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYDLDSHLHQT 774


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 177/320 (55%), Gaps = 6/320 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++KA G  P+V +YS LI+GL + G +     LF EM     E G+    D + Y 
Sbjct: 573 ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM----KEQGL--HLDVLAYN 626

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+IDG CK G VDKA +LL +MK K + P VVTY SV+ G    +  +EA  LF E    
Sbjct: 627 TVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI 686

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV  NVV +S ++D   K G+++EA  +LE ++Q G+ PN++ +N L+D       ++ A
Sbjct: 687 GVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA 746

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           +  F +M+++ C  N  +YSI+ING C  ++   A   + EM  +G+KP  +TY T+  G
Sbjct: 747 QVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAG 806

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   V  A  LFD  +  G   D+  Y   I+GL      ++A  +F   R+  C ++
Sbjct: 807 LAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVN 866

Query: 305 IRSYSCLIDGLCKSGRLKIA 324
            ++   L+D L K+  L+ A
Sbjct: 867 SKTCVVLLDALHKADCLEQA 886



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 9/383 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A   F ++KA G  P+ +TY+TLI  LC+      A+ LFEE+ +N +        P   
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRS-------VPCVY 344

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I G    G  D+A  LL + K K   P V+ YN ++          EA R+  EM
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q   PN+ T+++++D LCK G++E A ++ + M + G+ PN    N ++D  C   ++
Sbjct: 405 R-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  +F+ ++   C  +  ++  LI+G  +   ++ A SLY +ML     P VV Y +L
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
               F+  + E   K++ EM   G + D     +++D + K G + +   LF  ++    
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+RSYS LI GL K+G  +  ++LF+ +    L  DV+ YN +I   C  GK+DKA+ 
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQ 643

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M+ KG+ P  V + +++ G
Sbjct: 644 LLEEMKTKGLQPTVVTYGSVVDG 666



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 207/391 (52%), Gaps = 6/391 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PN++T + +I+ LC+      A ++F  + +       VC PD+  + ++IDG
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK------VCSPDSRTFCSLIDG 491

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G VD A  L  +M D +  P+VV Y S+I+ F       +  +++ EM+ +G  P+
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++  +  MD + K G++E+   L E +   G+ P+   Y+ L+ G    G      +LF 
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M+  G   +V +Y+ +I+G+CK+ +++ A  L  EM +KG++PTVVTY ++  GL +I 
Sbjct: 612 EMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKID 671

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E +  GV  +   Y + IDG  K G I EA  +   L       +  +++
Sbjct: 672 RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+D L K+  +  A   F ++       + +TY+IMI+ LC   K +KA   + +M+ +
Sbjct: 732 CLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQ 791

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           G+ P+ + + T++ G  +     +   L  R
Sbjct: 792 GLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 206/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  L    C P+  T+ +LI+GL R G    A +L+E+M++ +        P+ V
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQ------IPNVV 518

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I    K G  +   ++  +M  +  +PD++  NS +     A +  + + LF E+
Sbjct: 519 VYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI 578

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+V ++S+++  L K G   E  +L   M + G+  +   YNT++DGFC +G+V
Sbjct: 579 KAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKV 638

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A +L   M++ G +  V +Y  +++G  K   ++ A  L+ E  S G+   VV Y++L
Sbjct: 639 DKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSL 698

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  +++ +   +D L K   I EA   F+ ++ LKC
Sbjct: 699 IDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKC 758

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS +I+GLC   +   A+  +  + +  L  + +TY  MI  L   G + +A  
Sbjct: 759 SPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARG 818

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   +A G  PD   +N ++ G    N+ 
Sbjct: 819 LFDRFKASGGVPDSACYNAMIEGLSSANKA 848



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 197/389 (50%), Gaps = 7/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  + K  GC P+VI Y+ ++  L R G    AL + +EM            P+  
Sbjct: 361 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-------PNLT 413

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G ++ A ++   MK+  + P+++T N +I   C A   +EA  +F+ +
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL 473

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+  TF  ++D L + G++++A  L E M+     PN  VY +L+  F   GR 
Sbjct: 474 DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK 533

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M   GC  ++   +  ++   K  E+E   +L+ E+ ++G+ P V +Y+ L
Sbjct: 534 EDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSIL 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +       +KLF EM+  G+  D  AY T IDG CK+G + +A +L   ++    
Sbjct: 594 IHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGL 653

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 654 QPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +  ++  KG+ P+   +N L+   ++  E
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEE 742



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 167/316 (52%), Gaps = 6/316 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+++  ++ ++ + + G       LFEE I   G       PD   Y+ +I GL K 
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEE-IKAQG-----LVPDVRSYSILIHGLVKA 600

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           GF  +  +L  +MK++ ++ DV+ YN+VI GFC +   ++A +L  EM  +G+QP VVT+
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             ++D L K  +++EA  L E    IGV  N  +Y++L+DGF   GR++ A  +   +  
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N ++++ L++   K +EI+ A   +  M +    P  +TY+ +  GL  I +  +
Sbjct: 721 KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNK 780

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           AF  + EMQ+ G+  +   Y T I GL K G ++EA  LF   +      D   Y+ +I+
Sbjct: 781 AFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIE 840

Query: 314 GLCKSGRLKIAWELFH 329
           GL  + +   A+ +F 
Sbjct: 841 GLSSANKAMDAYIVFE 856



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 152/316 (48%), Gaps = 1/316 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M+     P    Y ++I     AN  +    LF +M + G + NV  F+ ++    + G+
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++ A  LL+ M       +  +YN  +D F   G+V+ A + F  M++ G   +  +Y+ 
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI   CK + ++ A+ L+ E+      P V  YNT+ +G     + + A+ L +  +R G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                 AY   +  L + G + EAL +   +R      ++ +Y+ LID LCK+G L+ A 
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAAL 432

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ++  ++    L  +++T NIMI  LC   K+D+A  +FL ++ K  +PD   F +L+ G 
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492

Query: 386 IRNNETSKVVELLHRM 401
            R         L  +M
Sbjct: 493 GRRGRVDDAYSLYEKM 508



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 5/348 (1%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           +P    YTT+I  L      D    L  QM++     +V  + +++R F      + A  
Sbjct: 200 RPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALS 259

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM       ++V ++V +D   K GK++ A +    M   G+ P+   Y TL+   C
Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
              R++ A ELF  ++       V++Y+ +I GY    + + A SL      KG  P+V+
Sbjct: 320 KARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN +   L    +VE A ++ DEM R   A +   Y   ID LCK G +  AL++  T+
Sbjct: 380 AYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTM 438

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      +I + + +ID LCK+ +L  A  +F  L   V   D  T+  +I  L   G++
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRV 498

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM---LGCIRNNETSKVV-ELLHR 400
           D A+ L+  M      P+ V + +L+     C R  +  K+  E++HR
Sbjct: 499 DDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHR 546



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K+ K++EA  ++E+M +   RP    Y TL+       R +    LF  M+ +G + NV 
Sbjct: 180 KSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH 239

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
            ++ L+  + +   I+ ALSL  EM S      +V YN       ++ +V+ A+K F EM
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G+  D   Y T I  LCK   + EA+ELF  L + +    + +Y+ +I G   +G+ 
Sbjct: 300 KAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKF 359

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+ L     R   I  V+ YN ++  L   GK+++A  +  +M  +  AP+   +N L
Sbjct: 360 DEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNIL 418

Query: 382 MLGCIRNNETSKVVELLHRMDE 403
           +    +  E    +++   M E
Sbjct: 419 IDMLCKAGELEAALKVQDTMKE 440



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 8/304 (2%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           V+    +  D  EA  +F EM     QP V+    +M  L       +  + +E   Q  
Sbjct: 77  VLENGLWGPDVEEALNVFDEM----SQPEVIVG--VMKRLKDVNVAFQYFRWVERKTQQA 130

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P   VYN  +     T  ++  +++   M   G   +      L+  + K+ +++ A 
Sbjct: 131 HCPE--VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAF 188

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +   M     +P    Y TL   L   ++ +    LF +MQ  G  A+   + T +   
Sbjct: 189 GVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVF 248

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
            + G I  AL L   ++      D+  Y+  ID   K G++ +AW+ FH +    L+ D 
Sbjct: 249 AREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDD 308

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           VTY  +I  LC   ++D+A +LF +++     P   A+NT+++G     +  +   LL R
Sbjct: 309 VTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLER 368

Query: 401 MDER 404
              +
Sbjct: 369 QKRK 372


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 204/390 (52%), Gaps = 6/390 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E N  T + +++  C+T     A  +  EM     E   V  PD V +  +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEM-----EKRCVF-PDVVTHNVLIDARFRAGD 207

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           VD A  L+  M ++ + P +VTYNSV++G C     ++AK +F  M    V P+V +F++
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C+ G+++EA +  + M    V P+   ++ L+  F   G ++ A      M+ +G
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +   Y+++I G+C+   +  AL +  EM+  G  P VVTYNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           KL +EM+  GV  D   + T I G C+ G    AL+LF TL   +   D+ +Y+ LIDG+
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ G L  A EL+  +    ++ + +TY+I+I + C  G+++ A     +M  KG  P+ 
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNI 507

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             +N+++ G  R+    K  + L +M + N
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 204/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +      P+V +++ LI G CR G    A+  ++EM +          PD V
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQH------RYVTPDVV 298

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ +I    + G +D A   L +MK   + PD V Y  VI GFC A   +EA R+  EM
Sbjct: 299 SFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VVT++ +++ LCK  ++ +A +LL  M + GV P+   + TL+ G+C  G  
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF ++     + +V +Y+ LI+G C+  ++  A  L+ +M ++ I P  +TY+ L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E  QVE AF   DEM + G   +   Y + I G C++G + +  +  + +R    
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +++ LI G  K   +  A+ +F+ + + ++  D VTYN++I+     G M  A  
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F  M   G+ PD   + +L+ G +    + +  +L   M  R
Sbjct: 599 VFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 199/383 (51%), Gaps = 8/383 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL   +   G +P ++TY++++ GLC+      A  +F  M            PD   
Sbjct: 211 AIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQ------CSVAPDVRS 264

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I G C+ G V +A +   +M+ + + PDVV+++ +I  F    + + A     EM 
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+ V +++++   C+ G M EA ++ + M+  G  P+   YNTL++G C   R+ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A++L   ME  G   ++ +++ LI+GYC+    E AL L+  +L + ++P VVTYN+L 
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G+     + +A +L+D+M    +  +   Y   ID  C+ G + +A      + + K  
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEM-VKKGN 503

Query: 303 L-DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           L +IR+Y+ +I G C+SG +K   +    + +  +  D++T+N +IH    +  M  A +
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFN 563

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           +F  ME + V PD V +N ++ G
Sbjct: 564 VFNIMEKEMVRPDAVTYNMIING 586



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +++     P+V+++S LI    R G    A     EM       G+   PD V
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK------GLGLVPDGV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT +I G C+ G + +A  +  +M      PDVVTYN+++ G C  +   +A++L  EM
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV P++ TF+ ++   C+ G  E A QL + +++  +RP+   YN+L+DG C  G +
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL+  M +     N  +YSILI+ +C+  ++E A     EM+ KG  P + TYN++
Sbjct: 454 AKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V++  +   +M++  V  D   + T I G  K   +  A  +F  +     
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ +I+G  + G ++ A  +F  +    +  D  TY  +I+     G   +A  
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQ 633

Query: 362 LFLDMEAKGVAPD 374
           L  +M  +G APD
Sbjct: 634 LHDEMIHRGFAPD 646



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 176/338 (52%), Gaps = 6/338 (1%)

Query: 70  LCKEGFVDKAKEL--LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           L + G+   A+E   L+   D  +N    T N ++  +C   + + A  +  EM  + V 
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVN--AYTLNIMVHSYCKTLEFDGADTVISEMEKRCVF 189

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+VVT +V++D   + G ++ A  L++ M   G++P    YN+++ G C   R ++AKE+
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F +M+      +V S++ILI G+C+  E++ A+  Y EM  + + P VV+++ L IGLF 
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL-IGLFS 308

Query: 248 IH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
              +++ A     EM+  G+  D   Y   I G C+ G + EAL +   +    C  D+ 
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ L++GLCK  RL  A +L + +    +  D+ T+  +IH  C  G  + A  LF  +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             + + PD V +N+L+ G  R  + +K  EL   M  R
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 145/269 (53%), Gaps = 6/269 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  +++  G  P++ T++TLI+G CR G+   AL LF+ ++          +PD 
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR------LRPDV 437

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y ++IDG+C++G + KA EL   M  + I P+ +TY+ +I   C      +A     E
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDE 497

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PN+ T++ I+   C++G +++  Q L+ M Q  V P+   +NTL+ G+     
Sbjct: 498 MVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  +F  ME    + +  +Y+++ING+ +   ++ A  ++  M   GI+P   TY +
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L  G       ++AF+L DEM   G A D
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 157/325 (48%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +E++  +   +  P    ++ +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G    A +   L++      NA+  N ++  +C T   + A  +   ME      +
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+   +  +++ A++L   M ++G+KP +VTYN++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M +  VA D  ++   I G C+ G + EA++ ++ ++      D+ S+SCLI    + G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            +  A      +    L+ D V Y ++I   C  G M +A  +  +M   G  PD V +N
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           TL+ G  + +      +LL+ M+ER
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEER 396


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 185/358 (51%), Gaps = 9/358 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+++ +S L+  + R  H    L+L+++M      FG+    +      +I+  C    +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQM----DSFGI--PHNTYTLNILINSFCHLNRL 61

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A  +L  +      P   T+ ++IRG C      EA +LF +M  +G QP+V+T+  +
Sbjct: 62  GFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTL 121

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ LCK+ ++ EA  L   M+  G+ PN F Y++L+ G C+ G    A  LF +M     
Sbjct: 122 INGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 181

Query: 197 KHNVFSYSILINGYCKNKEIE---GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             +  +++ L++  CK   I+    A+ L+ EM  +G+ P  VTYNTL  GL  + ++  
Sbjct: 182 MPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 241

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LF EM  +G   D   YR   D LCKN  + EA+ L + +     + DI  YS ++D
Sbjct: 242 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 301

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           G+C++G L+ A +LF  L    L  DV TY IMI+ LC  G + +A  LF +M+   +
Sbjct: 302 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 3/351 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P  V ++ ++  + +         L  QM    I  +  T N +I  FC+ N    A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  TF+ ++  LC  GK+ EA QL + M   G +P+   Y TL++G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             ++  A  LF  M + G   N F+YS LI+G C     + A+ L+  M+ + I P  +T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 238 YNTLFIGLFE---IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           +NTL   L +   I  +++A  LF+EM + G+  DT  Y T I GLC  G + +A+ LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            + +     D+ +Y  L D LCK+ RL  A  L   +    L  D+  Y+I++  +C  G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +++ A DLF  + +KG+ PD   +  ++ G  +    ++  +L   MDE +
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND 358



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 163/310 (52%), Gaps = 13/310 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ++   +   G +P+  T++TLI GLC  G    AL LF++M  G G      +PD + 
Sbjct: 64  AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM-TGEG-----FQPDVLT 117

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+GLCK+  + +A  L   M  K I+P+  TY+S+I G C      EA RLF  M+
Sbjct: 118 YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 177

Query: 123 DQGVQPNVVTFSVIMDELCKNGK---MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + + P+ +TF+ ++D LCK G    M++A  L E M Q G+ P+   YNTL+ G C  G
Sbjct: 178 HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R+  A  LF  M   G   ++ +Y IL +  CKN  +  A+ L   +    + P +  Y+
Sbjct: 238 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 297

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  G+    ++E A  LF ++   G+  D   Y   I+GLC+ G + EA +LF  +   
Sbjct: 298 IVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD-- 355

Query: 300 KCELDIRSYS 309
             E DI SYS
Sbjct: 356 --ENDIESYS 363



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 139/248 (56%), Gaps = 9/248 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+ + A G  PN  TYS+LI+GLC  GH   A+ LF  MI+          PD +
Sbjct: 133 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK------IMPDQL 186

Query: 62  IYTTIIDGLCKEGFV---DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            + T++D LCKEG +   DKA  L  +M  + + PD VTYN++I G C+     +A  LF
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 246

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+  G  P++VT+ ++ D LCKN ++ EA  LL+++    + P+  +Y+ +MDG C  
Sbjct: 247 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 306

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G +  A++LF  + S G   +V +Y+I+ING C+   +  A  L+ EM    I+      
Sbjct: 307 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFS 366

Query: 239 NTLFIGLF 246
              F G+F
Sbjct: 367 RNAFKGIF 374



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 127/249 (51%), Gaps = 3/249 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+++   P+   ++ L+         +    L+  M+S G  HN ++ +ILIN +C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A S+  ++L  G +P+  T+ TL  GL    ++  A +LFD+M   G   D   Y T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I+GLCK+  + EAL LF  +       +  +YS LI GLC  G  K A  LF+++    
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 336 LIADVVTYNIMIHALCADGK---MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           ++ D +T+N ++ ALC +G    MDKA  LF +M  +G+ PD V +NTL+ G        
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 393 KVVELLHRM 401
             + L H M
Sbjct: 241 DAIALFHEM 249



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 83/179 (46%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P++V ++ L   +  +        L+ +M   G+  +T+     I+  C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  A  +   +  L  +    +++ LI GLC  G++  A +LF  +       DV+TY  
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I+ LC D ++ +A  LF DM AKG++P+   +++L+ G        + + L + M  R
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   ++    +P++  YS +++G+CR G    A +LF ++ +          PD  
Sbjct: 276 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVR 329

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCY 107
            YT +I+GLC++G + +A +L  +M + +I        +  +G  Y
Sbjct: 330 TYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIFY 375


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 209/432 (48%), Gaps = 41/432 (9%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +L   ++ F C+P+V  Y+ LIN  C  G T  AL     MI+ NG     C P  V + 
Sbjct: 170 SLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMID-NG-----CTPSLVTFG 223

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+  C +G + +A+ L   MK+    P+VV YN+++ G+  A D  +A  L+ EM  +
Sbjct: 224 TVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSK 283

Query: 125 GVQPNVVTFSVI-----------------------------------MDELCKNGKMEEA 149
            V P+  TF+++                                   +  LC  G ++EA
Sbjct: 284 AVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEA 343

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            + LE M++ G+ P    +N+++  +   G   +A + +  M   G   +  + S LI G
Sbjct: 344 MKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMG 403

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             K   ++ A  L  EM+ +G+      +  L  G F +  V  A+ L++EM+  G+  D
Sbjct: 404 LSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPD 463

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
             A+  FI+GL   G + EA ++F  +       +   Y+ LI G C SGRL+ A  L  
Sbjct: 464 AVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLER 523

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            + R  L+ D+ T NI+I+ LC +G+M  A D+F +M   G+ PD V +NTL+ G  +  
Sbjct: 524 EMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAF 583

Query: 390 ETSKVVELLHRM 401
           +T    E++++M
Sbjct: 584 DTVSTDEVVNKM 595



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 6/401 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           MEA  LF  +K  G  PNV+ Y+TL+NG  +      A  L+EEM +          PD 
Sbjct: 236 MEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSK------AVAPDC 289

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  ++ G  + G  +    LL  +           YN  + G C+A   +EA +   +
Sbjct: 290 TTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLED 349

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P VV F+ I+    + G  E+A +   +M++ G+ P++   ++L+ G     R
Sbjct: 350 MLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWR 409

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A++L   M   G   N  ++++L++GY +  ++ GA SL++EM  +GI P  V ++ 
Sbjct: 410 LQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSA 469

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              GL  +  V+ A+ +F +M + G   + + Y + I G C +G + EAL L R +    
Sbjct: 470 FINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKG 529

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              DI + + +I+GLCK GR+K A ++F ++    LI D+VTYN +I   C         
Sbjct: 530 LLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTD 589

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++   M A G  PD   +N  + G     + S+ V +L  +
Sbjct: 590 EVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEEL 630



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 203/441 (46%), Gaps = 76/441 (17%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+++T+ T+IN  C  G+ + A NLF+    G  E G +  P+ V Y T+++G  K 
Sbjct: 214 GCTPSLVTFGTVINAFCNQGNMMEARNLFD----GMKEAGHI--PNVVCYNTLMNGYVKA 267

Query: 74  GFVDKAKELLLQMKDKNINPDVVT-----------------------------------Y 98
             + +A  L  +MK K + PD  T                                   Y
Sbjct: 268 RDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLY 327

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           N  + G C+A   +EA +   +M+++G+ P VV F+ I+    + G  E+A +   +M++
Sbjct: 328 NICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVK 387

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P++   ++L+ G     R+  A++L   M   G   N  ++++L++GY +  ++ G
Sbjct: 388 FGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAG 447

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF-------------------- 258
           A SL++EM  +GI P  V ++    GL  +  V+ A+ +F                    
Sbjct: 448 AYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIR 507

Query: 259 ---------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
                           EM R G+  D +     I+GLCK G +  A ++FR +       
Sbjct: 508 GFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIP 567

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           DI +Y+ LIDG CK+       E+ + +       D+ TYNI +H LC   KM +A  + 
Sbjct: 568 DIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMML 627

Query: 364 LDMEAKGVAPDCVAFNTLMLG 384
            ++ + GV PD V +NT+M G
Sbjct: 628 EELISAGVVPDTVTYNTVMNG 648



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 6/371 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P    ++ +I G CR GH  V  +L   M          C+PD   Y  +I+  C  
Sbjct: 144 GPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK------FKCQPDVYAYNILINAYCTR 197

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A   +  M D    P +VT+ +VI  FC   +  EA+ LF  M + G  PNVV +
Sbjct: 198 GQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCY 257

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +M+   K   + +A+ L E M    V P+   +N L+ G    GR      L   +  
Sbjct: 258 NTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ 317

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G       Y+I ++G C    ++ A+    +ML KGI PTVV +N++          E+
Sbjct: 318 SGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEK 377

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A+K +  M + G+   +    + I GL K   + EA +L   + +    ++  +++ L+D
Sbjct: 378 AYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G  + G +  A+ L++ +    +  D V ++  I+ L   G +D+A+D+FL M  KG  P
Sbjct: 438 GYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMP 497

Query: 374 DCVAFNTLMLG 384
           +   +N+L+ G
Sbjct: 498 NNFVYNSLIRG 508



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 176/389 (45%), Gaps = 6/389 (1%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E +     TL+ G  +      AL    E++    E G+  +P +   T +   L + G 
Sbjct: 76  ESDFSVLDTLMRGFLKVEMGCEAL----EIVGRMREVGL--RPSSSAITILFKLLLRIGD 129

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
                +LL  M  +   P    +N+VI GFC        + L   M     QP+V  +++
Sbjct: 130 HGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNI 189

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  C  G+  +A   +  MI  G  P+   + T+++ FC  G +  A+ LF  M+  G
Sbjct: 190 LINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAG 249

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              NV  Y+ L+NGY K ++I  A  LY EM SK + P   T+N L  G +   + E   
Sbjct: 250 HIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRD 309

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L  ++ + G  + +  Y   + GLC  G++ EA++    +        + +++ +I   
Sbjct: 310 RLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAY 369

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            ++G  + A++ +  + +  L    +T + +I  L    ++ +A DL  +M  +G+  + 
Sbjct: 370 SRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINK 429

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
            AF  L+ G  R  + +    L + M+ R
Sbjct: 430 AAFTLLLDGYFRMGDVAGAYSLWNEMEGR 458



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 2/314 (0%)

Query: 76  VDKAKELL--LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           VD+++E++  +  +      D    ++++RGF       EA  +   M + G++P+    
Sbjct: 58  VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++   L + G      +LL  MI  G RP    +N ++ GFC  G V   + L   M+ 
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             C+ +V++Y+ILIN YC   +   AL     M+  G  P++VT+ T+         +  
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  LFD M+  G   +   Y T ++G  K   I +A  L+  ++      D  +++ L+ 
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G  + GR +    L   L +   ++    YNI +  LC  G +D+A     DM  KG+ P
Sbjct: 298 GHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITP 357

Query: 374 DCVAFNTLMLGCIR 387
             VAFN+++    R
Sbjct: 358 TVVAFNSIIAAYSR 371


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 210/402 (52%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +++  G    V  Y++LING C+  +   A  L  EM+    E G+   P A 
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV----EKGLA--PSAA 441

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I GLC++G +  A EL  +M    ++ +V T+ ++I GFC   + +EA RLF +M
Sbjct: 442 SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  V PN VTF+V+++  C+ G + +A QL + M+  G+ P+ + Y +L+   CLT   
Sbjct: 502 IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGA 561

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +AKE    +E+     N FS + L+ G+CK   +     ++ EM ++G+K  ++++  +
Sbjct: 562 MKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVI 621

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                ++H  E+   LF EM+  GV  D   +   ID   K   IV+AL  +  +    C
Sbjct: 622 VYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGC 681

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LI+ LCKSG L  A  L   +  G  + +  TYN  +  L  +G+++KA  
Sbjct: 682 SPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKV 741

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           L   +  +G   + V FNTL+ G  +  +    ++L+    E
Sbjct: 742 LHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 205/404 (50%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +   +   G   + +TY TL+ G CRT    +AL + ++M++      +   P  
Sbjct: 247 LEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLS------LHFVPSV 300

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + ++DGL K G +DKA  L   + +  + P++   N++I   C      EA+RLF  
Sbjct: 301 ASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++PN VT+++++  LCK G M++A  + + M + G+R   + YN+L++G+C    
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A+ L   M   G   +  SYS LI G C+  ++  A+ L+ EM   G+   V T+ T
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   ++ A +LFD+M    V  +   +   I+G C+ G + +A +L+  +    
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y  LI  LC +     A E    L    ++ +  +   +++  C +G++ + +
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++ +M A+GV  D ++F  ++   ++ ++  K+  L   M E+
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK 644



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 198/402 (49%), Gaps = 6/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L T++++ G + + + Y+ L+ GLCR    + A+ +   M+    E G+V   D V 
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV----ERGIVA--DEVT 267

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T++ G C+   ++ A E+   M   +  P V + + ++ G       ++A RL   + 
Sbjct: 268 YRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLG 327

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN+   + ++D+LCK+ +  EA +L   M   G+ PN   Y  L+   C  G ++
Sbjct: 328 ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD 387

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +F  M   G +  V+ Y+ LINGYC++     A  L +EM+ KG+ P+  +Y+ L 
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLI 447

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     +  A +L  EM R+GV+ + + + T I G CK+G + EA  LF  +      
Sbjct: 448 AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ +I+G C+ G ++ A++L+  +    L  D  TY  +I  LC      KA + 
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEF 567

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             D+E   V  +  +  TLM G  +    ++   +   M  R
Sbjct: 568 VDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRAR 609



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 10/386 (2%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK-P-DAVIYTTIIDGLCKEGFVDK 78
           T S ++  L +     +A +LF+EM+         CK P D  +YT  I   C+   +D 
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQ--------CKFPLDEYVYTAGIRAYCEIRNLDG 213

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A+ LL +M+ K +    V YN ++ G C  N   EA  +   M+++G+  + VT+  ++ 
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVY 273

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
             C+  ++E A ++ + M+ +   P+    + ++DG    G +++A  L   +  +G   
Sbjct: 274 GFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVP 333

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N+F+ + LI+  CK++    A  L+  M ++G++P  VTY  L   L +   ++ A  +F
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMF 393

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           D M+  G+    + Y + I+G C++    +A  L   +          SYS LI GLC+ 
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRK 453

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G L  A EL   + R  +  +V T+  +I   C DG MD+A  LF  M    V P+ V F
Sbjct: 454 GDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTF 513

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           N ++ G  R     K  +L  +M +R
Sbjct: 514 NVMIEGYCRVGNVRKAFQLYDQMVDR 539



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 186/400 (46%), Gaps = 42/400 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  ++   G   NV T++TLI+G C+ G+   A  LF++MI+ +    VV  P+ V
Sbjct: 458 SAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS----VV--PNEV 511

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR------------------ 103
            +  +I+G C+ G V KA +L  QM D+ + PD  TY S+I                   
Sbjct: 512 TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDL 571

Query: 104 -----------------GFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                            GFC      E   ++ EM  +GV+ ++++F+VI+    K    
Sbjct: 572 ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDG 631

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E+ S L   M + GV+P+   +  ++D       + +A   +  M + GC  NV +Y++L
Sbjct: 632 EKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVL 691

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK+  +  A  L  EML     P   TYN     L    ++E+A K+       G 
Sbjct: 692 INHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGC 750

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+T  + T I G CK G I  A++L +         D  SYS +I+ LCK G +  A++
Sbjct: 751 LANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQ 810

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           L++ +    L  D+V YNI+I      G+ DK   ++ DM
Sbjct: 811 LWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 65/363 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING---------NGEF 52
           EAA LF K+      PN +T++ +I G CR G+   A  L+++M++              
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 53  GVVCKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            V+C                      ++   TT++ G CKEG + +   +  +M+ + + 
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP------------------------ 128
            D++++  ++      +D  +   LF EM ++GV+P                        
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNC 672

Query: 129 -----------NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
                      NVVT++V+++ LCK+G +  A  L E M+     PN+F YN  +D    
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G + +AK L  ++   GC  N  +++ LI G+CK  +I+GA+ L       G  P  ++
Sbjct: 733 EGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+T+   L ++  + +AF+L++EM   G+  D  AY   I     +G   + L ++  + 
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851

Query: 298 ILK 300
            LK
Sbjct: 852 NLK 854



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 3/297 (1%)

Query: 108 ANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           A D+ +  RL    +  G+     T S I+  L K  +   A  L + M+Q     + +V
Sbjct: 141 ARDAADVLRL---SLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYV 197

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y   +  +C    ++ A+ L   MES G K +   Y++L+ G C+N  +  A+ + + M+
Sbjct: 198 YTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV 257

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +GI    VTY TL  G     ++E A ++ D+M          +    +DGL K G+I 
Sbjct: 258 ERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID 317

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +A  L   L  L    ++ + + LID LCK  R + A  LF  +    L  + VTY I+I
Sbjct: 318 KAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           H+LC  G MD A  +F  M  KG+      +N+L+ G  +++   +   LL+ M E+
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK 434



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 9/270 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   ++ +++A G + ++I+++ ++    +         LF EM     E GV  KPD V
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREM----KEKGV--KPDNV 651

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +ID   KE  + +A     +M     +P+VVTY  +I   C +   + A+ L  EM
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN  T++  +D L   G++E+A ++L   I  G   N   +NTL+ GFC  G++
Sbjct: 712 LVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQI 770

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L  +    G   +  SYS +IN  CK  +I  A  L++EML KG+KP +V YN L
Sbjct: 771 QGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL 830

Query: 242 FIGLFEIH-QVERAFKLFDEMQRHGVAADT 270
            I    IH + ++   ++ +M     A DT
Sbjct: 831 -IRWCNIHGEFDKGLGIYSDMVNLKYADDT 859



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 104/191 (54%), Gaps = 7/191 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   + K+ A GC PNV+TY+ LIN LC++G+   A  L EEM+ G         P++
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGR------FLPNS 720

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y   +D L  EG ++KAK L   + +  +  + VT+N++I+GFC A     A  L   
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATILEGCL-ANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + G  P+ +++S I++ELCK G + +A QL   M+  G++P+   YN L+    + G 
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGE 839

Query: 181 VNRAKELFVSM 191
            ++   ++  M
Sbjct: 840 FDKGLGIYSDM 850


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 203/392 (51%), Gaps = 13/392 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F  +    C  +  TYSTL++GLC  G    A++L +EM    G F     P+ V
Sbjct: 18  QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGTF-----PNPV 71

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  LCK+G + +A +L+  M  K   P+ VTYNS++ G C     ++A  L   M
Sbjct: 72  AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 131

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN +TF  ++D   K+G+  +  ++L  + + G R N F Y++L+ G    G+ 
Sbjct: 132 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 191

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +L+  M   GCK N   YS LI+G C+  + + A     EM +KG  P   TY++L
Sbjct: 192 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 251

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G FE   + +A  ++ EM  +        Y   I+GLCKNG + EAL +++ +     
Sbjct: 252 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI 311

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           +LD+ +YS +I G C +  ++   +LF+ +    P+  L  DVVTYNI+++A C    + 
Sbjct: 312 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTKNSVS 369

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
           +A D+   M  +G  PD +  + + L  +R+N
Sbjct: 370 RAIDILNTMLDQGCDPDFITCD-IFLKTLRDN 400



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 198/382 (51%), Gaps = 14/382 (3%)

Query: 25  LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
           ++  LCR G+   A+ +F  M + N      C  D   Y+T++ GLC EG +D+A  LL 
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRN------CVADGYTYSTLMHGLCNEGRIDEAVSLLD 59

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M+ +   P+ V +N +I   C   D + A +L   M  +G  PN VT++ ++  LC  G
Sbjct: 60  EMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 119

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           K+++A  LL  M+     PN   + TL+DGF   GR      + VS+E  G + N FSYS
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 179

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G  K  + E  + L+ EM+ KG KP  + Y+ L  GL    + + A +   EM+  
Sbjct: 180 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK-- 322
           G   +++ Y + + G  + G I +A+ +++ +    C      YS LI+GLCK+G+LK  
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 299

Query: 323 -IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM--EAKGVAPDCVAFN 379
            I W+    L RG+ + DVV Y+ MIH  C    +++   LF  M      + PD V +N
Sbjct: 300 LIVWK--QMLSRGIKL-DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 356

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            L+      N  S+ +++L+ M
Sbjct: 357 ILLNAFCTKNSVSRAIDILNTM 378



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 139/239 (58%), Gaps = 8/239 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++   +   L+  G   N  +YS+LI+GL + G     + L++EM+         CKP+ 
Sbjct: 157 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNT 210

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           ++Y+ +IDGLC+EG  D+AKE L++MK+K   P+  TY+S++ G+  A D ++A  ++ E
Sbjct: 211 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 270

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D     + V +S++++ LCKNGK++EA  + + M+  G++ +   Y++++ GFC    
Sbjct: 271 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 330

Query: 181 VNRAKELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           V +  +LF  M   +   + +V +Y+IL+N +C    +  A+ + + ML +G  P  +T
Sbjct: 331 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 131/266 (49%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LC+ G +++A ++   M       + + Y+TLM G C  GR++ A  L   M+  G   N
Sbjct: 10  LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
             ++++LI+  CK  ++  A  L   M  KG  P  VTYN+L  GL    ++++A  L +
Sbjct: 70  PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M  +    +   + T +DG  K+G  ++ + +  +L       +  SYS LI GL K G
Sbjct: 130 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 189

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           + +   +L+  +       + + Y+ +I  LC +GK D+A +  ++M+ KG  P+   ++
Sbjct: 190 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYS 249

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           +LM G     +  K + +   M + +
Sbjct: 250 SLMWGYFEAGDIHKAILVWKEMTDND 275



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 29/206 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ ++    C  + + YS LINGLC+ G    AL ++++M++     G+  K D V
Sbjct: 263 KAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSR----GI--KLDVV 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y+++I G C    V++  +L  QM   +  + PDVVTYN ++  FC  N  + A  +  
Sbjct: 317 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 376

Query: 120 EMMDQGVQPNVVTFSV-----------------IMDELC----KNGKMEEASQLLELMIQ 158
            M+DQG  P+ +T  +                  +DEL     K  +   AS ++E+M+Q
Sbjct: 377 TMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQ 436

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRA 184
             + P    +   +   C   +V + 
Sbjct: 437 KFLLPKPSTWALAVQQLCKPMKVRKT 462


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 199/394 (50%), Gaps = 9/394 (2%)

Query: 11  KAFGCEPNVIT---YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTII 67
           KA    P  IT    S +++G C+ G    A  L +EM     +    C      Y  ++
Sbjct: 122 KALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACC------YNPLL 175

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           D   ++    +  E+L +M+   + P V TY  ++ G   A D ++ + +F E+  + V 
Sbjct: 176 DTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVA 235

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
            +V  +S +++  C+ G +  AS++ +  +  G+ PN   Y  L++GFC  G++  A+ L
Sbjct: 236 GDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEML 295

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M+  G  HN   ++ +I+GYC++  ++ AL + + M   GI+  V TYNTL  GL  
Sbjct: 296 LTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCR 355

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           ++++E A KL   M  +GV ++  +Y T I    K G +VEA  LFR +        + +
Sbjct: 356 VNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVT 415

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ +IDG  KSG ++ A      + +  L+ DV TY  ++H  C +GK+D A  LF +M+
Sbjct: 416 YNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMK 475

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +G  P+ VA+  L+ G  +   + +  +    M
Sbjct: 476 QRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 187/355 (52%), Gaps = 6/355 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A +  ++++ G EP V TY+ L++GL   G      ++F+E+   N         D   Y
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKN------VAGDVYFY 241

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + +I+  C+ G V +A E+  +     I P+  TY ++I GFC       A+ L  +M  
Sbjct: 242 SAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV  N + F+ ++D  C++G +++A ++  +M ++G++ + + YNTL  G C   R+  
Sbjct: 302 RGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMED 361

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK+L   M   G + N  SY+ LI+ + K  ++  A  L+ +M  KG +P+VVTYN +  
Sbjct: 362 AKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 421

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   +  A +   EM++ G+  D + Y   + G C NG +  AL LF  ++    + 
Sbjct: 422 GYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKP 481

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           ++ +Y+ LI GL K GR + A++ + ++    L  D   Y++++ +L  D + D+
Sbjct: 482 NVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 192/385 (49%), Gaps = 14/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G + N   Y+ L++   R  +      + +EM +G  E      P   
Sbjct: 151 DARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVE------PTVG 204

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++DGL   G + K + +  ++K KN+  DV  Y++VI  +C A +   A  +F E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PN  T+  +++  CK G++E A  LL  M   GV  N  ++NT++DG+C  G V
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A E+   ME MG + +V++Y+ L  G C+   +E A  L   M   G++   V+Y TL
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 242 FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
                 IH  E     A +LF +M+  G       Y   IDG  K+G I EA    + + 
Sbjct: 385 I----SIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEME 440

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+ +Y+ L+ G C +G++ +A  LF  + +     +VV Y  +I  L  +G+ +
Sbjct: 441 KKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSE 500

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
           +A   + +M A G+ PD   ++ L+
Sbjct: 501 EAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 157/304 (51%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           V+ GFC A   ++A+RL  EM   GV+ N   ++ ++D   +       +++L+ M   G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V P    Y  L+DG    G +++ + +F  ++      +V+ YS +IN YC+   +  A 
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++ E +  GI+P   TY  L  G  +I Q+E A  L  +MQ  GV  +   + T IDG 
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C++G + +ALE+   +  +  +LD+ +Y+ L  GLC+  R++ A +L H +    + ++ 
Sbjct: 319 CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNY 378

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V+Y  +I     +G M +A  LF DME KG  P  V +N ++ G I++    +       
Sbjct: 379 VSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKE 438

Query: 401 MDER 404
           M+++
Sbjct: 439 MEKK 442



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF  ++  G  P+V+TY+ +I+G  ++G    A    +EM     + G+V  PD 
Sbjct: 395 VEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM----EKKGLV--PDV 448

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++ G C  G VD A  L  +MK +   P+VV Y ++I G      S EA + +  
Sbjct: 449 YTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDN 508

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           M+  G+ P+   +S+++  L  + + +E
Sbjct: 509 MLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 284 GYIVEALELFRTLRILKCE--LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           G+++ A EL R   +  C   +   S S ++DG CK+GR+  A  L   +PR  +  +  
Sbjct: 111 GHLLPAAELLRKA-LASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNAC 169

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            YN ++          +  ++  +ME+ GV P    +  L+ G     + SKV  +   +
Sbjct: 170 CYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEI 229

Query: 402 DERN 405
             +N
Sbjct: 230 KRKN 233


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 204/379 (53%), Gaps = 7/379 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV T++ +I+GL + G     L +++ M     E       D   Y+++I GLC EG V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNERE------KDLYTYSSLIHGLCDEGNV 306

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           DKA+ +  ++ ++    DVVTYN+++ GFC      E+  L+  +M+Q    N+V+++++
Sbjct: 307 DKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNIL 365

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L +NGK++EA+ +  LM   G   +   Y   + G C+ G VN+A  +   +ES G 
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGG 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V++Y+ +I+  CK + +E A +L  EM   G++      N L  GL    ++  A  
Sbjct: 426 HLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASL 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L   M ++G      +Y   I GLC+ G   EA    + +     + D+++YS L+ GLC
Sbjct: 486 LMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLC 545

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +  ++++A EL+H   +  L  DV+ +NI+IH LC+ GK+D A  +  +ME +    + V
Sbjct: 546 RDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605

Query: 377 AFNTLMLGCIRNNETSKVV 395
            +NTLM G  +  ++++  
Sbjct: 606 TYNTLMEGYFKVRDSNRAT 624



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 210/436 (48%), Gaps = 43/436 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++  +LF   +  G  PN+ TY+ LI   C+      A      M           KPD 
Sbjct: 131 VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEG------FKPDV 184

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y+T+I+ L K G +D A EL  +M ++ + PDV  YN +I GF    D   A +L+ +
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244

Query: 121 MM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ D  V PNV T ++++  L K G++++  ++ + M Q     + + Y++L+ G C  G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            V++A+ +F  +       +V +Y+ ++ G+C+  +I+ +L L+  M  +     +V+YN
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYN 363

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL E  +++ A  ++  M   G AAD   Y  FI GLC NGY+ +AL + + +   
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESK 423

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--------------GVLIAD------ 339
              LD+ +Y+ +ID LCK  RL+ A  L   + +              G LI D      
Sbjct: 424 GGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDA 483

Query: 340 ---------------VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                          VV+YNI+I  LC  GK  +A     +M   G+ PD   ++ L+ G
Sbjct: 484 SLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGG 543

Query: 385 CIRNNETSKVVELLHR 400
             R+ +    +EL H+
Sbjct: 544 LCRDRKIELALELWHQ 559



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 189/351 (53%), Gaps = 3/351 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEA 114
           CK D  +  ++I    K    D+A ++  +M++     P + +YN+++  F  A    + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKV 133

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           + LF      GV PN+ T++V++   CK  + E+A   L  M + G +P+ F Y+T+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIND 193

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 233
              TG+++ A ELF  M       +V  Y+ILI+G+ K K+ + A+ L+ ++L    + P
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            V T+N +  GL +  +V+   K++D M+++    D + Y + I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
             L   K  +D+ +Y+ ++ G C+ G++K + EL+  + +   + ++V+YNI+I  L  +
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLEN 372

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           GK+D+A  ++  M AKG A D   +   + G   N   +K + ++  ++ +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESK 423



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 187/388 (48%), Gaps = 13/388 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ++F +L       +V+TY+T++ G CR G    +L L+  M   N         + V
Sbjct: 308 KAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNS-------VNIV 360

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GL + G +D+A  +   M  K    D  TY   I G C     N+A  +  E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G   +V  ++ I+D LCK  ++EEAS L++ M + GV  N+ V N L+ G     R+
Sbjct: 421 ESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M   GC   V SY+ILI G C+  +   A +   EML  G+KP + TY+ L
Sbjct: 481 SDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSIL 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A +L+ +  + G+  D   +   I GLC  G + +A+ +   +    C
Sbjct: 541 LGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600

Query: 302 ELDIRSYSCLIDGLCK---SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             ++ +Y+ L++G  K   S R  + W   + +    L  D+++YN ++  LC   ++  
Sbjct: 601 TANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMG---LQPDIISYNTILKGLCLCHRVSY 657

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           A + F D    G+ P    +N L+   +
Sbjct: 658 AIEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 2/312 (0%)

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V Y+ ++R    A       R+   +  Q  + +      ++    KN   + A  + + 
Sbjct: 44  VVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKR 103

Query: 156 MIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           M +I G  P    YNTL++ F    +  + + LF   E+ G   N+ +Y++LI   CK K
Sbjct: 104 MREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E E A    + M  +G KP V +Y+T+   L +  +++ A +LFDEM    VA D   Y 
Sbjct: 164 EFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYN 223

Query: 275 TFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             IDG  K      A++L+ + L       ++++++ +I GL K GR+    +++  + +
Sbjct: 224 ILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQ 283

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
                D+ TY+ +IH LC +G +DKA  +F ++  +    D V +NT++ G  R  +  +
Sbjct: 284 NEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKE 343

Query: 394 VVELLHRMDERN 405
            +EL   M++RN
Sbjct: 344 SLELWRIMEQRN 355



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 6/213 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L   +   GC P V++Y+ LI GLC  G    A    +EM+  NG      KPD  
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE-NG-----LKPDLK 535

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++ GLC++  ++ A EL  Q     + PDV+ +N +I G C     ++A  +   M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +    N+VT++ +M+   K      A+ +   M ++G++P+   YNT++ G CL  RV
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRV 655

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           + A E F    + G    V++++IL+      K
Sbjct: 656 SYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 190/349 (54%), Gaps = 6/349 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P+VITY+ LI      G    AL LF+E+++         +PD   Y  II G+CKE
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRG------LRPDLYTYNAIIRGICKE 249

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G  D+A + +  +  +  NPDVV+YN ++R F   +   + +RL  +M+  G +PNVVT 
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S+++   C+ G++ EA  +LE+M + G+ P+++ Y+ L+  FC  GR++ A E    M S
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  ++ +Y+ ++   CK    + AL ++ ++   G  PTV  YNT+F  L+      +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A ++  EM R G+  D   Y + I  LC++G + EA+ L   +   + +  + S++ ++ 
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLL 489

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           G+CK+ R+    EL  ++     + +  +Y ++I  +   G   +A +L
Sbjct: 490 GMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 202/426 (47%), Gaps = 42/426 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V+  + LI G   + +   A+ + E ++   G+      PD   Y  +I G  K 
Sbjct: 92  GFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILETYGD------PDVYSYNAMISGFSKA 144

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D A ++  +M+ +  +PDVVTYN +I   C       A  +  E++  G +P+V+T+
Sbjct: 145 NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++     G++ EA +L + ++  G+RP+ + YN ++ G C  G  +RA +    + +
Sbjct: 205 TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSA 264

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  +V SY+IL+  +      E    L  +M+  G +P VVT++ L        +V  
Sbjct: 265 RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVRE 324

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  + + M+  G+  D+++Y   I   CK G +  A+E    +    C  DI +Y+ ++ 
Sbjct: 325 AVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILA 384

Query: 314 GLCKSGRLKIAWELFHSLP-----------------------------------RGVLIA 338
            LCK G   +A ++F  L                                    R  +  
Sbjct: 385 TLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDP 444

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D +TYN +I  LC DG +D+A  L +DMEA    P  ++FN ++LG  + +   + +ELL
Sbjct: 445 DEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELL 504

Query: 399 HRMDER 404
             M E+
Sbjct: 505 ITMVEK 510



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 168/341 (49%), Gaps = 11/341 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L + G  P++ TY+ +I G+C+ G    AL+ F   ++  G     C PD V
Sbjct: 219 EALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALD-FVRHLSARG-----CNPDVV 272

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++     +   +  + L+  M      P+VVT++ +I  FC      EA  +   M
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+  ++  ++   CK G+++ A + LE M+  G  P+   YNT++   C  G  
Sbjct: 333 KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGY--CKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           + A ++F  ++ +GC   V +Y+ + +    C NK    AL + SEM+ KGI P  +TYN
Sbjct: 393 DLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK--IKALEMISEMIRKGIDPDEITYN 450

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L   L     V+ A  L  +M+         ++   + G+CK   + E +EL  T+   
Sbjct: 451 SLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEK 510

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR-GVLIAD 339
            C  +  SY  LI+G+  +G    A EL +SL R GV+  D
Sbjct: 511 GCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD 551



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 162/333 (48%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G  +++   L  +  K   PDVV    +I+GF  + +  +A R+ +E+++    P+V
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRV-MEILETYGDPDV 131

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            +++ ++    K  +++ A+Q+ + M   G  P+   YN ++   C  G++  A E+   
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +   GCK +V +Y+ILI        I  AL L+ E++S+G++P + TYN +  G+ +   
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            +RA      +   G   D  +Y   +          +   L + + +  CE ++ ++S 
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI   C+ GR++ A  +   +    L  D  +Y+ +I A C +G++D A +    M + G
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD V +NT++    +       +++  ++DE
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 6/126 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  + +++   G +P+ ITY++LI+ LCR G    A+ L  +M           +P  
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM------EATRFQPTV 481

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + +  ++ G+CK   V +  ELL+ M +K   P+  +Y  +I G  YA    EA  L   
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANS 541

Query: 121 MMDQGV 126
           +   GV
Sbjct: 542 LYRLGV 547


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 205/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +L+ +G  P+  + + +   LCR      A+ LF+E+   N      C    
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLD-EAVQLFQELPEKN-----TCS--- 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LC  G +  A +L  +M      PDVVTY  ++ G+C  ++   A +L  E
Sbjct: 256 --YNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V ++ ++  LC  G++ +A +++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+  F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL+I +Y+ LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+AH
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L  +M  KG+ P  V +N LM G   +        LL  M E+N
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +++ A G E N + Y+++I  LC  G    A+ + E+M+      GVV   DA +
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++ G C++G +  A+    +M+ + +  D VTY ++I G C A +  EA+R+  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + VT++V++D  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KP V TY T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ L+   C    +K   E++  +    ++ +  TYNI+I   C    M +A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG      ++N L+    +  + ++   L  +M
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 178/365 (48%), Gaps = 41/365 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +   ++T+++G CR G    A N F+EM     + G+    D V YT +I+GLC+ G + 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEM----QKRGLAA--DGVTYTALINGLCRAGELK 407

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A+ +L +M+DK ++ D VTY  +I G+C      EA  +  +M+ + V PNVVT++ + 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D LCK G +  A++LL  M   G+  N F YN+L++G C  G + +A    + M+  G K
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V++Y+ +I   C++KE++ A SL  EML KGIKPT+VTYN L  G     +VE   +L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 258 FDEMQRHGVAADTWAYRTF-----------------------------------IDGLCK 282
            + M    +  +T  Y +                                    I G CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              + EAL     +      L   SY+ LI  L K  +   A  LF  + +  L A+   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 343 YNIMI 347
           YN  I
Sbjct: 708 YNFYI 712



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 190/392 (48%), Gaps = 14/392 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L     E N  +Y+ L+  LC  G    A  LF+EM +          PD V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G C    ++ A +LL +M  + +  + V Y SVI   C     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV  +   F+ +M   C+ G +  A    + M + G+  +   Y  L++G C  G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   ME  G   +  +Y++LI+GYCK  ++  A  ++++M+ K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A +L  EM   G+  + + Y + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ +I  LC+S  L  A  L   +    +   +VTYN++++  C  G+++    
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETS 392
           L   M  K + P+   +N+LM   CI  N  S
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G + + +TY+ LI+G C+ G    A  +  +M+           P+ V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT + DGLCK+G V  A ELL +M  K +  ++ TYNS+I G C A +  +A R  I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V T++ I+  LC++ +++ A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P   TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 302 ELDIRSYSCLID 313
             +   Y+  ID
Sbjct: 702 TAEPDVYNFYID 713


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 205/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +L+ +G  P+  + + +   LCR      A+ LF+E+   N      C    
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLD-EAVQLFQELPEKN-----TCS--- 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LC  G +  A +L  +M      PDVVTY  ++ G+C  ++   A +L  E
Sbjct: 256 --YNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V ++ ++  LC  G++ +A +++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+  F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL+I +Y+ LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+AH
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L  +M  KG+ P  V +N LM G   +        LL  M E+N
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +++ A G E N + Y+++I  LC  G    A+ + E+M+      GVV   DA +
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++ G C++G +  A+    +M+ + +  D VTY ++I G C A +  EA+R+  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + VT++V++D  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KP V TY T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ L+   C    +K   E++  +    ++ +  TYNI+I   C    M +A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG      ++N L+    +  + ++   L  +M
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 178/365 (48%), Gaps = 41/365 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +   ++T+++G CR G    A N F+EM     + G+    D V YT +I+GLC+ G + 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEM----QKRGLAA--DGVTYTALINGLCRAGELK 407

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A+ +L +M+DK ++ D VTY  +I G+C      EA  +  +M+ + V PNVVT++ + 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D LCK G +  A++LL  M   G+  N F YN+L++G C  G + +A    + M+  G K
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V++Y+ +I   C++KE++ A SL  EML KGIKPT+VTYN L  G     +VE   +L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 258 FDEMQRHGVAADTWAYRTF-----------------------------------IDGLCK 282
            + M    +  +T  Y +                                    I G CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              + EAL     +      L   SY+ LI  L K  +   A  LF  + +  L A+   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV 707

Query: 343 YNIMI 347
           YN  I
Sbjct: 708 YNFYI 712



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 190/392 (48%), Gaps = 14/392 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L     E N  +Y+ L+  LC  G    A  LF+EM +          PD V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G C    ++ A +LL +M  + +  + V Y SVI   C     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV  +   F+ +M   C+ G +  A    + M + G+  +   Y  L++G C  G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   ME  G   +  +Y++LI+GYCK  ++  A  ++++M+ K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A +L  EM   G+  + + Y + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ +I  LC+S  L  A  L   +    +   +VTYN++++  C  G+++    
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETS 392
           L   M  K + P+   +N+LM   CI  N  S
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G + + +TY+ LI+G C+ G    A  +  +M+           P+ V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT + DGLCK+G V  A ELL +M  K +  ++ TYNS+I G C A +  +A R  I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V T++ I+  LC++ +++ A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P   TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRL 701

Query: 302 ELDIRSYSCLID 313
             +   Y+  ID
Sbjct: 702 TAEPDVYNFYID 713


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 206/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +++ +G  P+    + +++ L        A+ LF+ + + N     VC    
Sbjct: 217 LPSAPLLRRVRQYGISPSPEACNAVLSRLPLDE----AIELFQGLPDKN-----VCS--- 264

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LC  G V+ A++L  +M      PDVVTY  +I G+C   +   A +L  +
Sbjct: 265 --YNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDD 319

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV+PN   ++ ++  LC  G++ +A  ++E M+   V  +  VY T++ GFC  G 
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+  F  M+  G   +  +Y+ LING C+  E++ A  +  EML++ +    VTY  
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +  ++  AF++ + M + GVA +   Y    DGLCK G +  A EL   +    
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL+  +Y+ LI+GLCK+G L  A      +    L  DV TY  +I ALC  G++D+AH
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           DL  +M   G+ P  V +N LM G   +       +LL  M E+N
Sbjct: 560 DLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 194/361 (53%), Gaps = 12/361 (3%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+T+++G C  G  + A   F+EM       G+    D V YTT+I+GLC+ G + +A++
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLAT--DGVTYTTLINGLCRAGELKEAEK 420

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +L +M  + ++ D VTY  ++ G+C      EA ++   M+ +GV PNVVT++ + D LC
Sbjct: 421 VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           K G ++ A++LL  M   G+  NA  YN+L++G C  G +++A      M++ G K +V+
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+  CK+ E++ A  L  EML  GIKPT+VTYN L  G     +VE   KL + M
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
               +  +   Y + +   C    +    E+++ +     E +  +Y+ LI G CK+  +
Sbjct: 601 LEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSM 660

Query: 322 KIAWELFHS--LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VAPDCVA 377
           K A + FH+  + +G  +    +Y+ +I  L    K  +A  LF DM  +G    PD   
Sbjct: 661 KEA-QYFHNEMIEKGFRLT-ASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718

Query: 378 F 378
           F
Sbjct: 719 F 719



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 199/405 (49%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF  L     + NV +Y+ L+  LC  G    A  LF+EM +          PD V
Sbjct: 249 EAIELFQGLP----DKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---------PPDVV 295

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G ++ A +LL  M  + + P+   Y SV+   C     ++A  +  +M
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   V  +   ++ ++   C  G +  A +  + M + G+  +   Y TL++G C  G +
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++   M +     +  +Y++L++GYCK  ++  A  +++ M+ +G+ P VVTY  L
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V+ A +L  EM   G+  +   Y + I+GLCK GY+ +A+     +     
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ LID LCKSG L  A +L   +    +   +VTYN++++  C  G+++    
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVELLHRMDERN 405
           L   M  K + P+   +N+LM   CI NN  S   E+   M  RN
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKS-TTEIYKGMCSRN 639



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 202/383 (52%), Gaps = 9/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++ +    P+V+TY  LI+G C  G    A+ L ++M+    E      P+A 
Sbjct: 280 DARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVE------PNAT 330

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+++  LC +G V  A  ++  M    +  D   Y +V+ GFC   D   A+R F EM
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  + VT++ +++ LC+ G+++EA ++L+ M+   +  +   Y  L+DG+C  G++
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++  +M   G   NV +Y+ L +G CK  +++ A  L  EM +KG++    TYN+L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   +++A +   +M   G+  D + Y T ID LCK+G +  A +L + +     
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  I +Y+ L++G C SGR++   +L   +    +  +  TYN ++   C    M    +
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++  M ++ V P+   +N L+ G
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKG 653



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 154/277 (55%), Gaps = 6/277 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G  PNV+TY+ L +GLC+ G    A  L  EM N   E       +A 
Sbjct: 452 EAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL------NAC 505

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I+GLCK G++D+A   +  M    + PDV TY ++I   C + + + A  L  EM
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G++P +VT++V+M+  C +G++E   +LLE M++  + PNA  YN+LM  +C+   +
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               E++  M S   + N  +Y+ILI G+CK + ++ A   ++EM+ KG + T  +Y+ L
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L +  +   A KLF +M++ G  A+   Y  +ID
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 176/348 (50%), Gaps = 8/348 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A   F +++  G   + +TY+TLINGLCR G    A  + +EM+    +       D 
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV------DE 434

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V YT ++DG CK G + +A ++   M  + + P+VVTY ++  G C   D   A  L  E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++ N  T++ +++ LCK G +++A + +  M   G++P+ + Y TL+D  C +G 
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++RA +L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P   TYN+
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L       + ++   +++  M    V  +   Y   I G CK   + EA + F    I K
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA-QYFHNEMIEK 673

Query: 301 C-ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
              L   SYS LI  L K  +   A +LFH + +    A+   YN  I
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 123/259 (47%), Gaps = 6/259 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  ++   G E N  TY++LINGLC+ G+   A+    +M           KPD   
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG------LKPDVYT 541

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+ID LCK G +D+A +LL +M D  I P +VTYN ++ GFC +      K+L   M+
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWML 601

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + PN  T++ +M + C    M+  +++ + M    V PN   YN L+ G C    + 
Sbjct: 602 EKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMK 661

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+     M   G +    SYS LI    K K+   A  L+ +M  +G       YN   
Sbjct: 662 EAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721

Query: 243 IGLFEIHQVERAFKLFDEM 261
              F    +E    L DE+
Sbjct: 722 DFNFNEDNLEATLALCDEL 740


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 208/407 (51%), Gaps = 14/407 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVAL--NLFEEMINGNGEFGVVCKP 58
           A   F K KA    P  I Y++++   C+ G+  T+ AL   + EE   GN   G     
Sbjct: 220 AEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGN--LG----- 272

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
              +YTT+++G  +    +K      ++K   ++P   TY  +++ F  A +  +A  + 
Sbjct: 273 ---LYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 329

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   GV PN + +++IMD   + G    A ++ E M+  G++P+   YN L+  FC  
Sbjct: 330 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKA 389

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GR+++A  +  ++++      + +Y+ +++GY K   I+ AL ++  + + G++P VV+Y
Sbjct: 390 GRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSY 449

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N+L  GL +  Q+E A  + DEM  +GV  +  +Y    +G  + G + +A  +F+ ++ 
Sbjct: 450 NSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 509

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
               +DI +Y  L+   CKSG ++ A E+F  +    L  + +TY  M+      G++ K
Sbjct: 510 ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSK 569

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A DL  DM+  G   D + + + +  C R+ +T +V E L  M E+ 
Sbjct: 570 ARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKK 616



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 195/401 (48%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A F  ++A   +PNV  Y++LI+          A+   EEM++   +       +  +
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQL------NEAV 203

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + +II G    G  + A+    + K +N+ P  + YNS+++ +C A +    + L  +M 
Sbjct: 204 FCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQME 263

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G Q N+  ++ +++   +    E+       +   G+ P A  Y  ++  F   G + 
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMA 323

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A ++   M+  G   N   Y+++++GY +  +   A  ++ +M+S G+KP +VTYN L 
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILV 383

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +  ++++A  + + +Q + +      Y + +DG  K G+I +ALE+F  ++     
Sbjct: 384 HAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLR 443

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + SY+ L+ GL K+ +++ A  +   +    ++ +  +Y  +       G ++KA  +
Sbjct: 444 PGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGM 503

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M+ + +A D VA+  L+  C ++    + VE+  ++ +
Sbjct: 504 FQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITD 544



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 165/345 (47%), Gaps = 6/345 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   G  PN + Y+ +++G  R G    A  ++E+M++         KPD V Y  
Sbjct: 328 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG------LKPDIVTYNI 381

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++   CK G +DKA  +L  ++   + P + TY S++ G+       +A  +F  +   G
Sbjct: 382 LVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAG 441

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P VV+++ ++  L K  +ME A  +L+ M+  GV PN   Y  L +G+   G V +A 
Sbjct: 442 LRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAF 501

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F  M+      ++ +Y  L+   CK+  ++ A+ ++ ++   G+K   +TY T+  G 
Sbjct: 502 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGW 561

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++ +A  L  +MQ+HG   DT  Y +FI    ++G   E  E    +R  K E++ 
Sbjct: 562 ARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 621

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           R+Y+ LI G   +     A   +       L  D    N ++  L
Sbjct: 622 RTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGL 666



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 179/390 (45%), Gaps = 9/390 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           + F +LKA G  P   TY  ++    + G+   AL++ EEM     + GV   P+ +IY 
Sbjct: 292 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM----DKHGV--SPNKMIYA 345

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            I+DG  + G    A ++   M    + PD+VTYN ++  FC A   ++A  +   +   
Sbjct: 346 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQAN 405

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P + T++ I+D   K G +++A ++ + +   G+RP    YN+L+ G     ++  A
Sbjct: 406 RLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 465

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + +   M + G   N  SY+ L  GY +  ++E A  ++  M  + +   +V Y  L   
Sbjct: 466 RLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +   ++RA ++F ++   G+  +   Y T +DG  + G + +A +L + ++     LD
Sbjct: 526 CCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLD 585

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              Y+  I    +SG  +   E    +    L  +  TY  +IH   A    D+A   + 
Sbjct: 586 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 645

Query: 365 DMEAKGVAPDCVAFNTLMLG---CIRNNET 391
             +A G+  D    N L+ G   C   N T
Sbjct: 646 QAKASGLQLDSALSNCLLSGLISCASQNST 675



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 161/350 (46%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F V+ KP    Y  ++D   + G    A+     M+  +I P+V  Y S+I  +  A D 
Sbjct: 123 FQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDM 182

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A     EM+ QG+Q N   F  I+      G  E A    E      + P   VYN++
Sbjct: 183 EGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSI 242

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +  +C  G +   + L   ME  G + N+  Y+ ++NG+ + ++ E  LS +  + + G+
Sbjct: 243 VQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGL 302

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            PT  TY  +     +   + +A  + +EM +HGV+ +   Y   +DG  + G    A +
Sbjct: 303 SPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFK 362

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           ++  +     + DI +Y+ L+   CK+GR+  A  +  ++    L+  + TY  ++    
Sbjct: 363 VWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYV 422

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G + KA ++F  ++  G+ P  V++N+L+ G  +  +      +L  M
Sbjct: 423 KGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEM 472


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 208/423 (49%), Gaps = 41/423 (9%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+P++IT+ST+I   C  G+ + A  +FE    G  E G+   P+  +Y T++ G  K 
Sbjct: 343 GCKPSLITFSTIITAFCNEGNVVEARKIFE----GIQEVGL--SPNVAMYNTLMSGYFKA 396

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------------------- 104
             V +A  L  +M+DK I PD  T+N ++ G                             
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLY 456

Query: 105 ------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
                  C+A   +EA +   +M+++G+ P+VV F+ ++    + G  + A +  ++M+ 
Sbjct: 457 DVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLM 516

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P++   ++++ G    GR+  A++L   M   G   N  ++++L++GY K  +  G
Sbjct: 517 FGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAG 576

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A SL+ EM ++GI P  + ++    GL +   VE A++ F EM + G   + + Y + I 
Sbjct: 577 AHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIH 636

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           GLC  G + EAL+L R +R      DI + + +I+G CK GR+K A++ F  +    +  
Sbjct: 637 GLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTP 696

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           D VTYN +I   C    M  A +    M A G  PD   +N  + G   + + S+ V +L
Sbjct: 697 DTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTML 756

Query: 399 HRM 401
             +
Sbjct: 757 DEL 759



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L   +  F CEP+V  Y+ LIN     G T  AL     MI  NG     CKP  + 
Sbjct: 297 AESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIK-NG-----CKPSLIT 350

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++TII   C EG V +A+++   +++  ++P+V  YN+++ G+  A D  +A  L+ EM 
Sbjct: 351 FSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMR 410

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+  TF++++    K GK  ++ +L        + P+  +Y+  + G C  G+++
Sbjct: 411 DKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLD 470

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +    M   G   +V +++ +I  Y +    + A   Y  ML  G+ P+  T +++ 
Sbjct: 471 EAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSML 530

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           +GL +  +++ A  L  +M   G+  +  A+   +DG  K G    A  L+  +      
Sbjct: 531 LGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGIC 590

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  ++S  IDGL K+G ++ A+E F  + +   + +   YN +IH LC  GK+ +A  L
Sbjct: 591 PDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKL 650

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
             +M  KG+ PD    N ++ G
Sbjct: 651 EREMRQKGLLPDIFTTNIIING 672



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 192/446 (43%), Gaps = 65/446 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM--------------- 45
           +EA  +F  ++  G  PNV  Y+TL++G  +      A  L+EEM               
Sbjct: 365 VEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNIL 424

Query: 46  INGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           + GN ++G                  PD  +Y   + GLC  G +D+A + L  M +K +
Sbjct: 425 VAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGM 484

Query: 92  NPDVVTYNSVIRGFCYANDSN-----------------------------------EAKR 116
            P VV +NSVI  +  A   +                                   EA+ 
Sbjct: 485 PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARD 544

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M+D+G+  N V F+V++D   K G    A  L   M   G+ P+A  ++  +DG  
Sbjct: 545 LLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLS 604

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G V  A E F  M   G   N F Y+ LI+G C   ++  AL L  EM  KG+ P + 
Sbjct: 605 KAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIF 664

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           T N +  G  +  +++ AF  F EM   GV  DT  Y T I G CK   +V A E    +
Sbjct: 665 TTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKM 724

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                + DI +Y+  I G C S ++  A  +   L    ++ + VTYN M++A+C D  +
Sbjct: 725 YASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-ML 783

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLM 382
           D+A  L   +      P+ V  N L+
Sbjct: 784 DRAMVLTAKLLKMAFVPNVVTTNVLL 809



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 182/358 (50%), Gaps = 7/358 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA      +   G  P+V+ ++++I    R G    A   ++ M+     FG+V  P + 
Sbjct: 471 EAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML----MFGLV--PSSS 524

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             ++++ GL K+G + +A++LL +M DK +  + V +  ++ G+    D+  A  L+ EM
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEM 584

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+ + FS  +D L K G +EEA +    M + G  PN FVYN+L+ G C  G++
Sbjct: 585 EARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKL 644

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M   G   ++F+ +I+ING+CK   ++ A   ++EM   G+ P  VTYNTL
Sbjct: 645 HEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTL 704

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++  +  A +  ++M   G   D   Y   I G C +  I  A+ +   L  +  
Sbjct: 705 IGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGV 764

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +  +Y+ +++ +C +  L  A  L   L +   + +VVT N+++   C  G  +KA
Sbjct: 765 VPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 181/403 (44%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  + ++++  G  P+    S L   L R G       L   MI          +P   
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGP------RPCNH 279

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I   C++G++  A+ LL  M      PDV  YN +I  +     +++A      M
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLM 339

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +P+++TFS I+   C  G + EA ++ E + ++G+ PN  +YNTLM G+     V
Sbjct: 340 IKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDV 399

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  L+  M   G   +  +++IL+ G  K  +   +  L+ +     + P    Y+  
Sbjct: 400 CQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVS 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    Q++ A +  ++M   G+     A+ + I    + G+   A + ++ + +   
Sbjct: 460 VAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGL 519

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                + S ++ GL K GRL+ A +L + +    L  + V + +++      G    AH 
Sbjct: 520 VPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHS 579

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+ +MEA+G+ PD +AF+  + G  +     +  E    M ++
Sbjct: 580 LWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKK 622



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 173/387 (44%), Gaps = 10/387 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +VI++     G  R+ H      L E M   + ++    + D  I  T++ G        
Sbjct: 176 DVISWVIRRIGASRSAH------LVEFMWANHHKY----ESDFSILNTLMRGFMNSEMAY 225

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           ++ E+L +M++  + P     + + R      D     +L   M+  G +P    F++++
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMI 285

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
              C+ G +  A  LL +M +    P+ + YN L++ + + GR + A      M   GCK
Sbjct: 286 LCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCK 345

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            ++ ++S +I  +C    +  A  ++  +   G+ P V  YNTL  G F+   V +A  L
Sbjct: 346 PSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANML 405

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           ++EM+  G+A D   +   + G  K G   ++ ELFR   +     D   Y   + GLC 
Sbjct: 406 YEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCW 465

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +G+L  A +    +    +   VV +N +I A    G  D AH  +  M   G+ P    
Sbjct: 466 AGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSST 525

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDER 404
            ++++LG  +     +  +LL++M ++
Sbjct: 526 CSSMLLGLSKKGRLQEARDLLYKMIDK 552



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A     K+ A G +P++ TY+  I G C +     A+ + +E+I      GVV  P+ 
Sbjct: 715 VSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI----AVGVV--PNT 768

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC 106
           V Y T+++ +C +  +D+A  L  ++      P+VVT N ++  FC
Sbjct: 769 VTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFC 813


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 184/361 (50%), Gaps = 28/361 (7%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EPN IT +TLI GLC  G    AL LF + +   G F +    + V Y  +I+GLCK 
Sbjct: 256 GYEPNTITLTTLIKGLCLNGKVNEAL-LFHDHVLALG-FHL----NHVTYGILINGLCKM 309

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G    A ++L Q++ K +N +VV Y++VI G C      +A  L+ EM+ + + P VVTF
Sbjct: 310 GQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTF 369

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-- 191
                         +A  L   M+   + PN + +N L+D  C  G++  AK + + M  
Sbjct: 370 --------------KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVD 415

Query: 192 ------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
                   M CK N  SY+ LI+G+CK+  +  A  L  +M  +G  P V+TYN+L   L
Sbjct: 416 EALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHAL 475

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            + H V++A  L +  +  G+  D   Y T +DGLCK G + +A  +F+ L I    L  
Sbjct: 476 CKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPT 535

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ +I+GLC  G L  A  L   +     I DVVTY  +IHAL    + DKA  L  +
Sbjct: 536 WTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRE 595

Query: 366 M 366
           +
Sbjct: 596 L 596



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 176/412 (42%), Gaps = 86/412 (20%)

Query: 58  PDAVIYTTIIDGLCK-EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
           P  V +  I+  L K +        L  QM+ K + PD+ T + +I   CY         
Sbjct: 203 PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILIN--CY--------- 251

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            + +M   G +PN +T + ++  LC NGK+ EA    + ++ +G   N   Y  L++G C
Sbjct: 252 -YFKM---GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 307

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+   A ++   +E      NV  YS +I+G CK+K +  A  LYSEM+ K I PTVV
Sbjct: 308 KMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVV 367

Query: 237 TY---------------------NTLFIGLFE-----------IHQVERAFKLFDEMQRH 264
           T+                     N L   L +           I  V+ A  LF EM   
Sbjct: 368 TFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMH-- 425

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-------------ILKC---------- 301
               +T +Y T IDG CK+G +  A +L   +R             +L            
Sbjct: 426 -CKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKA 484

Query: 302 ------------ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
                       + D+ +Y+ L+DGLCK GRLK A  +F  L          TYNIMI+ 
Sbjct: 485 IALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMING 544

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LC +G +D+A  L   ME  G  PD V + T++      +E  K  +L+  +
Sbjct: 545 LCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVREL 596



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 157/349 (44%), Gaps = 82/349 (23%)

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYA-NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
           +LQM+     P +V +N ++       N       L  +M  +GV+P++ T S++++  C
Sbjct: 196 MLQMRH---TPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILIN--C 250

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
              KM             G  PN     TL+ G CL G+VN A      + ++G   N  
Sbjct: 251 YYFKM-------------GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHV 297

Query: 202 SYSILINGYCKN----------KEIEGAL-------------------------SLYSEM 226
           +Y ILING CK           ++IEG L                          LYSEM
Sbjct: 298 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEM 357

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + K I PTVVT+              +AF LF EM    +  + + +   +D LCK+G I
Sbjct: 358 IVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKI 403

Query: 287 V-----------EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
                       EAL LF  +    C+ +  SY+ LIDG CKSGRL  AW+L   +    
Sbjct: 404 KEAKNVIIKMVDEALNLFTEMH---CKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRG 460

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
              +V+TYN ++HALC +  +DKA  L  + + +G+ PD   +NTL+ G
Sbjct: 461 QPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDG 509



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 132/230 (57%), Gaps = 2/230 (0%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING--NGEFGVVCKPD 59
           +A +LF ++      PNV T++ L++ LC+ G    A N+  +M++   N    + CKP+
Sbjct: 370 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPN 429

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            V Y T+IDG CK G +  A +LL QM+D+   P+V+TYNS++   C  +  ++A  L  
Sbjct: 430 TVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVN 489

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              DQG+QP++ T++ ++D LCK G++++A  + + ++  G     + YN +++G CL G
Sbjct: 490 NFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEG 549

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            ++ A+ L   ME  GC  +V +Y  +I+   +  E + A  L  E++ +
Sbjct: 550 LLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVR 599


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 204/426 (47%), Gaps = 31/426 (7%)

Query: 6   LFTKLKAFG-CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV---------- 54
           +F +LK  G C+PN +++ TL+  LC+      AL +F+EM+    +  V          
Sbjct: 147 MFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCT 206

Query: 55  -------------------VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
                               C  DA  Y  +++  C+ G + +    +   +        
Sbjct: 207 CRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSA 266

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           V YN +I+GF       EA +LF   M +   P+V T+++++  LCK+ ++EEA  L + 
Sbjct: 267 VNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQE 325

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
             Q GV  + F Y+ LMD F   GR  +A E+F +M+  GC  +   Y++LI+   K  +
Sbjct: 326 AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGK 385

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ AL L  +M  KGI P   TYN +   L    + E+A+  F  M+R   + D   Y T
Sbjct: 386 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            ++GL K     EA +LF  ++  KC  D+ ++  LID L K+GR++ A E    L +  
Sbjct: 446 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 505

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
              +   YN +I   C  G++DK ++LF DM      PD + +  L+LG  R   TS  +
Sbjct: 506 HAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 565

Query: 396 ELLHRM 401
           ELL  M
Sbjct: 566 ELLQEM 571



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 181/385 (47%), Gaps = 15/385 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTG--HTIVALNLFEEMINGNGEFGVVCKPD 59
           +A  L   + A  C  +  TY  L+N  CR G  H + +   F E+   +G     C   
Sbjct: 214 QARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVAS---FMELARHDG-----CALS 265

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           AV Y  II G  + G + +A +L      K   PDV TYN +I   C +    EA  LF 
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQ 324

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E    GV  +V T+S +MD   K G+  +A ++   M + G  P+  VYN L+      G
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+ A EL   M   G   +  +Y+I+I+        E A S +  M  +   P VVTYN
Sbjct: 385 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 444

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           TL  GL ++ + + A  LFDEMQ +    D   + T ID L K G + +ALE  ++ R++
Sbjct: 445 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALE--QSARLV 502

Query: 300 KCELDIRSY--SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           K      SY  + LI G C+SG++   +ELF  +       D +TY I++      G   
Sbjct: 503 KMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 562

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +L  +M  +G  P    +N L+
Sbjct: 563 MAMELLQEMVREGHTPALATYNVLI 587



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 7/380 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E A+     +  GC  + + Y+ +I G  R G    A  LFE  +           PD  
Sbjct: 249 EVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKES------VPDVF 302

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCK   +++A  L  + +   +  DV TY+ ++  F  A  + +A  +F  M
Sbjct: 303 TYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ V ++V++  L K GK++EA +LLE M + G+ P+   YN ++D     GR 
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A   F  M+      +V +Y+ L+NG  K +  + A  L+ EM +    P + T+ TL
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A +    + + G A +++ Y   I G C++G + +  ELF+ +    C
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ L+ G  + G   +A EL   + R      + TYN++I +L   G+++ A+ 
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYT 601

Query: 362 LFLDMEAKGVAPDCVAFNTL 381
           LF +M AKG  PD   ++ L
Sbjct: 602 LFKEMIAKGFNPDMQTYSAL 621



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 185/388 (47%), Gaps = 45/388 (11%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +T +  I    R G    A+ + ++M  GN      C+PD V +T  +  LC+   V++A
Sbjct: 54  VTCTECIQAFGRAGDLDAAMGMLDDMRRGN-----FCQPDTVAFTAAMHWLCEVRRVEQA 108

Query: 80  KELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIM 137
             L   M++  +  PDVV YN++I G+C A D + A  +F  +  +G  +PN V+F  ++
Sbjct: 109 MTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLV 168

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LCK  +  +A  + + M+  G++ +  V NTL+   C  G + +A+ L   M +  C 
Sbjct: 169 IFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACA 228

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            + F+Y IL+N +C+  ++                                H+V      
Sbjct: 229 RDAFTYGILVNAHCRAGQM--------------------------------HEVAS---- 252

Query: 258 FDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           F E+ RH G A     Y   I G  + G + EA +LF +    +   D+ +Y+ LI  LC
Sbjct: 253 FMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALC 311

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KS +L+ A  LF    +G ++ DV TY+ ++ A    G+  KA ++F +M+  G  PD V
Sbjct: 312 KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTV 371

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +N L+    +  +  + +ELL  M+ +
Sbjct: 372 VYNVLISCLGKQGKVDEALELLEDMNRK 399



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 6/215 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F  +K     P+V+TY+TL+NGL +   T  A +LF+EM          C PD  
Sbjct: 423 KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK------CMPDLT 476

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+ID L K G ++ A E   ++      P+   YN++I GFC +   ++   LF +M
Sbjct: 477 TFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDM 536

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++    P+ +T+++++    + G    A +LL+ M++ G  P    YN L+    + G+V
Sbjct: 537 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 596

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
             A  LF  M + G   ++ +YS L N    NK +
Sbjct: 597 EDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 631


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 205/391 (52%), Gaps = 6/391 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +K  G  PN+IT + +I+ LC+      A ++F  + +       VC PD+V + ++IDG
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK------VCTPDSVTFCSLIDG 490

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L + G V+ A  L  +M D    P+ V Y S+IR F       +  +++ EMM +G  P+
Sbjct: 491 LGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           ++  +  MD + K G++E+   L E +   G+ P+   Y+ L+ G    G      +LF 
Sbjct: 551 LMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFY 610

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M+  G   +  +Y+I+I+G+CK+ ++  A  L  EM +KG++PTVVTY ++  GL +I 
Sbjct: 611 EMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKID 670

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ A+ LF+E +   V  +   Y + IDG  K G I EA  +   L       +  +++
Sbjct: 671 RLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWN 730

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
           CL+D L K+  +  A   F ++       + VTY+IM++ LC   K +KA   + +M+ +
Sbjct: 731 CLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ 790

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           G+ P+ + + T++ G  R     +  +L  R
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFER 821



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 209/390 (53%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  L    C P+ +T+ +LI+GL R G    A  L+E+M++          P+AV
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQ------TPNAV 517

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I    K G  +   ++  +M  +  +PD++  N+ +     A +  + + LF E+
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI 577

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+V ++S+++  L K G  ++  +L   M + G+  +   YN ++DGFC +G+V
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKV 637

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A +L   M++ G +  V +Y  +I+G  K   ++ A  L+ E  SK +   VV Y++L
Sbjct: 638 NKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSL 697

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  +T+ +   +D L K   I EAL  F+ ++ LKC
Sbjct: 698 IDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKC 757

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS +++GLCK  +   A+  +  + +  L  + +TY  MI  L   G + +A D
Sbjct: 758 PPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKD 817

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   ++ G  PD   +N ++ G    N+ 
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKA 847



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 173/320 (54%), Gaps = 6/320 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++KA G  P+V +YS LI+GL + G +     LF EM     E G+    D   Y 
Sbjct: 572 ALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM----KEQGL--HLDTRAYN 625

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +IDG CK G V+KA +LL +MK K + P VVTY SVI G    +  +EA  LF E   +
Sbjct: 626 IVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V  NVV +S ++D   K G+++EA  +LE ++Q G+ PN + +N L+D       ++ A
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F +M+++ C  N  +YSI++NG CK ++   A   + EM  +G+KP  +TY T+  G
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISG 805

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L  +  V  A  LF+  +  G   D+  Y   I+GL      ++A  LF   R+  C + 
Sbjct: 806 LARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIY 865

Query: 305 IRSYSCLIDGLCKSGRLKIA 324
            ++   L+D L K+  L+ A
Sbjct: 866 SKTCVVLLDALHKADCLEQA 885



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 206/404 (50%), Gaps = 15/404 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  + K  GC P+VI Y+ ++  L R G    AL + E M        +   P+  
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-------KMDAAPNLT 412

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LCK G ++ A ++   MK+  + P+++T N +I   C A   +EA  +F+ +
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGL 472

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+ VTF  ++D L ++GK+ +A  L E M+  G  PNA VY +L+  F   GR 
Sbjct: 473 DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRK 532

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYC----KNKEIEGALSLYSEMLSKGIKPTVVT 237
               +++  M   GC  ++    +L+N Y     K  EIE   +L+ E+ ++G+ P V +
Sbjct: 533 EDGHKIYKEMMHRGCSPDL----MLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRS 588

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ L  GL +    +  +KLF EM+  G+  DT AY   IDG CK+G + +A +L   ++
Sbjct: 589 YSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D
Sbjct: 649 TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID 708

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A+ +  ++  KG+ P+   +N L+   ++  E  + +     M
Sbjct: 709 EAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 6/369 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ K+   G  PN + Y++LI    + G       +++EM++        C PD +
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG------CSPDLM 552

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +    +D + K G ++K + L  ++K + + PDV +Y+ +I G      S +  +LF EM
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+  +   +++++D  CK+GK+ +A QLLE M   G++P    Y +++DG     R+
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF   +S     NV  YS LI+G+ K   I+ A  +  E++ KG+ P   T+N L
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +++ A   F  M+      +   Y   ++GLCK     +A   ++ ++    
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL 792

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +  +Y+ +I GL + G +  A +LF        I D   YN MI  L    K   A+ 
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYI 852

Query: 362 LFLDMEAKG 370
           LF +   KG
Sbjct: 853 LFEETRLKG 861



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 180/392 (45%), Gaps = 7/392 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++ F   P    Y+TLI  L         L L  +M     E  V       
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVH------ 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+I    +EG VD A  LL +MK  + N D+V YN  I  F      + A + F E+
Sbjct: 239 LFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VTF+ ++  LCK  +++EA +L E +      P  + YNT++ G+   G+ 
Sbjct: 299 KSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKF 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  L    +  GC  +V +Y+ ++    +  ++E AL +  E +     P + +YN L
Sbjct: 359 NEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNIL 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E A K+ D M+  G+  +       ID LCK   + EA  +F  L    C
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  ++  LIDGL + G++  A+ L+  +       + V Y  +I      G+ +  H 
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           ++ +M  +G +PD +  N  M    +  E  K
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEK 569



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 36/357 (10%)

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +++L +M      P   T   ++  F  +    EA  +   M     +P    ++ ++  
Sbjct: 152 EQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA 211

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L    + +    LL  M +IG      ++ TL+  F   GRV+ A  L   M+S     +
Sbjct: 212 LSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNAD 271

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +  Y++ I+ + K  +++ A   + E+ S+G+ P  VT+ ++   L +  +V+ A +LF+
Sbjct: 272 LVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFE 331

Query: 260 EMQRHGVAADTWAYRTFIDG-----------------------------------LCKNG 284
           E+  +      +AY T I G                                   L + G
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYN 344
            + EAL +   ++ +    ++ SY+ LID LCK+G L+ A ++  S+    L  +++T N
Sbjct: 392 KVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVN 450

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           IMI  LC   ++D+A  +FL ++ K   PD V F +L+ G  R+ + +    L  +M
Sbjct: 451 IMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKM 507



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 1/307 (0%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YN+++       +    +++  EM   G  P+  T   ++    K+ K+ EA  ++E M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            +   RP    Y TL+         +    L   M+ +G +  V  ++ LI  + +   +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + ALSL  EM S      +V YN       ++ +V+ A+K F E++  G+  D   + + 
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           I  LCK   + EA+ELF  L   K    + +Y+ +I G    G+   A+ L     R   
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           I  V+ YN ++  L   GK+++A  +   M+    AP+  ++N L+    +  E    ++
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALK 432

Query: 397 LLHRMDE 403
           +   M E
Sbjct: 433 VQDSMKE 439



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 91/199 (45%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  + K++++  A  +   M     +P    Y TL   L   H+ +    L  +MQ  G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                  + T I    + G +  AL L   ++      D+  Y+  ID   K G++ +AW
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           + FH L    L+ D VT+  MI  LC   ++D+A +LF ++++    P   A+NT+++G 
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 386 IRNNETSKVVELLHRMDER 404
               + ++   LL R   +
Sbjct: 353 GSVGKFNEAYSLLERQKRK 371



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
           H+  +Y+ L+    + + +E    +  EM   G  P+  T   +     +  ++  AF +
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGV 189

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            + M++        AY T I  L         L L R ++ +  E+ +  ++ LI    +
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            GR+  A  L   +      AD+V YN+ I      GK+D A   F +++++G+ PD V 
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 378 FNTLMLGCIRNNETSKVVELLHRMD 402
           F +++    +     + VEL   +D
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELD 334


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 187/333 (56%), Gaps = 2/333 (0%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  +++  CKEG +  A+++  ++  +++ P VV++N++I G+C   + +E  RL  +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V T+S +++ LCK  KM+ A  L + M + G+ PN  ++ TL+ G    G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  KE +  M S G + ++  Y+ L+NG+CKN ++  A ++   M+ +G++P  +TY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      VE A ++  EM ++G+  D   +   + G+CK G +++A    R +     
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ ++D  CK G  +  ++L   +     +  VVTYN++++ LC  G+M  A D
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA-D 540

Query: 362 LFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           + LD M   GV PD + +NTL+ G  R+  +SK
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 176/336 (52%), Gaps = 6/336 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   NV  ++ L+N  C+ G+   A  +F+E+   +       +P  V + T+I+G CK 
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS------LQPTVVSFNTLINGYCKV 288

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D+   L  QM+     PDV TY+++I   C  N  + A  LF EM  +G+ PN V F
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++    +NG+++   +  + M+  G++P+  +YNTL++GFC  G +  A+ +   M  
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + +  +Y+ LI+G+C+  ++E AL +  EM   GI+   V ++ L  G+ +  +V  
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +   EM R G+  D   Y   +D  CK G      +L + ++       + +Y+ L++
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           GLCK G++K A  L  ++    ++ D +TYN ++  
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 158/301 (52%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           +++ D     +V  +N ++  FC   + ++A+++F E+  + +QP VV+F+ +++  CK 
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           G ++E  +L   M +   RP+ F Y+ L++  C   +++ A  LF  M   G   N   +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+G+ +N EI+     Y +MLSKG++P +V YNTL  G  +   +  A  + D M R
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G+  D   Y T IDG C+ G +  ALE+ + +     ELD   +S L+ G+CK GR+  
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A      + R  +  D VTY +M+ A C  G       L  +M++ G  P  V +N L+ 
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528

Query: 384 G 384
           G
Sbjct: 529 G 529



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 174/349 (49%), Gaps = 9/349 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++     +P V++++TLING C+ G+      L  +M           +PD  
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR------TRPDVF 311

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+ LCKE  +D A  L  +M  + + P+ V + ++I G     + +  K  + +M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP++V ++ +++  CKNG +  A  +++ MI+ G+RP+   Y TL+DGFC  G V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+   M+  G + +   +S L+ G CK   +  A     EML  GIKP  VTY  +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +    +  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  +  
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             D  +Y+ L++G     R   + + +   P   ++AD+ +Y  +++ L
Sbjct: 552 VPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYKSIVNEL 597



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 147/285 (51%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            ++E++D G   NV  F+++M++ CK G + +A ++ + + +  ++P    +NTL++G+C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G ++    L   ME    + +VF+YS LIN  CK  +++GA  L+ EM  +G+ P  V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            + TL  G     +++   + + +M   G+  D   Y T ++G CKNG +V A  +   +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D  +Y+ LIDG C+ G ++ A E+   + +  +  D V ++ ++  +C +G++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             A     +M   G+ PD V +  +M    +  +     +LL  M
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 109/217 (50%)

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            ++ +   G   NV+ ++IL+N +CK   I  A  ++ E+  + ++PTVV++NTL  G  
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           ++  ++  F+L  +M++     D + Y   I+ LCK   +  A  LF  +       +  
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
            ++ LI G  ++G + +  E +  +    L  D+V YN +++  C +G +  A ++   M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             +G+ PD + + TL+ G  R  +    +E+   MD+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 10/141 (7%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL   L+A G +P+ +TY+ +++  C+ G       L +EM   +G       P  V Y 
Sbjct: 472 ALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHV-----PSVVTYN 524

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +++GLCK G +  A  LL  M +  + PD +TYN+++ G  +   +N +KR +I+  + 
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKR-YIQKPEI 581

Query: 125 GVQPNVVTFSVIMDELCKNGK 145
           G+  ++ ++  I++EL +  K
Sbjct: 582 GIVADLASYKSIVNELDRASK 602



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 59/120 (49%)

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G+I +A++ FR  R  + ++ IR    L+D + K       W  +  +       +V  +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           NI+++  C +G +  A  +F ++  + + P  V+FNTL+ G  +     +   L H+M++
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 199/429 (46%), Gaps = 36/429 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF ++K   C PNV TY+ LI GLCR  +   A+ L +EM+  N        PD +
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERN------LVPDLI 328

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I G C+ G +D A  LL  MK++ + PD  TY   I   C +N   EA+RLF  +
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV  NV+ +SV++D  CK GK++EA  L E M+     PNA+ +N L+ G C  G +
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M  MG K  V++++ILI    K  + + A     +M+S G KP   TYN  
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   +V+ A  +  +M+  GV  D + Y + I    K G    A ++ +++    C
Sbjct: 509 IEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADC 568

Query: 302 ELDIRSYSCLIDGLC-------KSG----------------------RLKIAWELFHSLP 332
           E    ++  LI  L        KSG                         I  ELF  + 
Sbjct: 569 EPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEME 628

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +     D   Y  +I  +C    +  A  L   M+ +G++P  + FN ++  C +  +  
Sbjct: 629 KHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYG 688

Query: 393 KVVELLHRM 401
           +   ++  M
Sbjct: 689 EAANIVEDM 697



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 11/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+   G  P+  T ++ I G CR+     A  +FEEM N N           V
Sbjct: 210 EAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----------EV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC+ G +D+A  L ++MKD    P+V TY ++I+G C  N  ++A  L  EM
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEM 318

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+++T++ ++   C+ G ++ A +LL LM + G+ P+   Y   +D  C + RV
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ LF S+   G   NV  YS+LI+GYCK  +++ A  L+ +MLSK   P   T+N L
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL     ++ A  LFD+M + G+    + +   I  + K G   +A +  + +     
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +   R+Y+  I+  C +G+++ A ++   +    +  D  TY  +I A    G    A D
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFD 558

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           +   M      P    F +L+
Sbjct: 559 VLKSMFDADCEPSHHTFLSLI 579



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 176/361 (48%), Gaps = 11/361 (3%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           Y+ L+  L R G       L+ EM+    EF  +   D   +  +I+  CK GFV +AK+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLE---EFVSM---DIYTFNLMINVYCKMGFVKEAKQ 213

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            + +M    ++PD  T  S I G+C + D + A R+F EM ++    N V+++ ++  LC
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLC 269

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + G+++EA  L   M      PN + Y  L+ G C    V++A  L   M       ++ 
Sbjct: 270 EAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLI 328

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI G C+   ++ A  L S M  +G+ P   TY      L + ++VE A +LFD +
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
              GV+A+   Y   IDG CK G + EA  LF  +    C  +  +++ LI GLC +G L
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           K A  LF  + +  L   V T+NI+I  +   G  D AH     M + G  P    +N  
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508

Query: 382 M 382
           +
Sbjct: 509 I 509



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 159/378 (42%), Gaps = 70/378 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF K+ +  C PN  T++ LI+GLC  G+   AL+LF++M+    + G+  KP   
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV----KMGL--KPTVY 468

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  + K+G  D A + L +M      P   TYN+ I  +C A    EA+ + ++M
Sbjct: 469 TFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQM 528

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM--------- 172
            ++GV P+  T++ ++    K G    A  +L+ M      P+   + +L+         
Sbjct: 529 KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYV 588

Query: 173 ------------DGFCLTGRVNRAK--------ELFVSMESMGCKHNVFSYSILINGYCK 212
                         F      N  K        ELF  ME  GC  +   Y  LI+G CK
Sbjct: 589 VEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICK 648

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYN--------------------------------- 239
            + +  AL L  +M  +GI P+ + +N                                 
Sbjct: 649 VENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEH 708

Query: 240 --TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             TL  GL+E  + ER   +F +++  G   D  A++  IDG+ K G + E  +LF  + 
Sbjct: 709 CKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEME 768

Query: 298 ILKCELDIRSYSCLIDGL 315
              C    R+YS L   L
Sbjct: 769 KNGCNFSPRTYSILTQKL 786



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 5/266 (1%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           L + G ++E +QL   M++  V  + + +N +++ +C  G V  AK+    M   G   +
Sbjct: 167 LARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPD 226

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
            F+ +  I GYC++K+++ A  ++ EM ++      V+YN L  GL E  +++ A  LF 
Sbjct: 227 YFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFV 282

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M+      + + Y   I GLC+   + +A+ L   +       D+ +Y+ LI G C++G
Sbjct: 283 RMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAG 341

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            L  A+ L   +    L+ D  TY   I  LC   ++++A  LF  +  +GV+ + + ++
Sbjct: 342 HLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYS 401

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
            L+ G  +  +  +   L  +M  +N
Sbjct: 402 VLIDGYCKVGKVDEAGCLFEKMLSKN 427



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 48/104 (46%)

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +L ++ Y+ L+  L + G +    +L+  +    +  D+ T+N+MI+  C  G + +A  
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
               M   G++PD     + +LG  R+ +      +   M  RN
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN 257


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 205/405 (50%), Gaps = 17/405 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +A L  +L+ +G  P+  + + +   LCR      A+ LF+E+   N      C    
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLP-LDEAVQLFQELPEKN-----TCS--- 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++  LC  G +  A +L  +M      PDVVTY  ++ G+C  ++   A +L  E
Sbjct: 256 --YNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V ++ ++  LC  G++ +A +++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+  F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            EL+I +Y+ LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+AH
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L  +M  KG+ P  V +N LM G   +        LL  M E+N
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L +++ A G E N + Y+++I  LC  G    A+ + E+M+      GVV   DA +
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +TT++ G C++G +  A+    +M+ + +  D VTY ++I G C A +  EA+R+  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + VT++V++D  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KP V TY T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +Y+ L+   C    +K   E++  +    ++ +  TYNI+I   C    M +A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             +M  KG      ++N L+    +  + ++   L  +M
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 178/365 (48%), Gaps = 41/365 (11%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +   ++T+++G CR G    A N F+EM     + G+    D V YT +I+GLC+ G + 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEM----QKRGLAA--DGVTYTALINGLCRAGELK 407

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
           +A+ +L +M+DK ++ D VTY  +I G+C      EA  +  +M+ + V PNVVT++ + 
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D LCK G +  A++LL  M   G+  N F YN+L++G C  G + +A    + M+  G K
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            +V++Y+ +I   C++KE++ A SL  EML KGIKPT+VTYN L  G     +VE   +L
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 258 FDEMQRHGVAADTWAYRTF-----------------------------------IDGLCK 282
            + M    +  +T  Y +                                    I G CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              + EAL     +      L   SY+ LI  L K  +   A  LF  + +  L A+   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 343 YNIMI 347
           YN  I
Sbjct: 708 YNFYI 712



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 190/392 (48%), Gaps = 14/392 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +L     E N  +Y+ L+  LC  G    A  LF+EM +          PD V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G C    ++ A +LL +M  + +  + V Y SVI   C     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV  +   F+ +M   C+ G +  A    + M + G+  +   Y  L++G C  G +
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   ME  G   +  +Y++LI+GYCK  ++  A  ++++M+ K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   V  A +L  EM   G+  + + Y + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D+ +Y+ +I  LC+S  L  A  L   +    +   +VTYN++++  C  G+++    
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG-CIRNNETS 392
           L   M  K + P+   +N+LM   CI  N  S
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G + + +TY+ LI+G C+ G    A  +  +M+           P+ V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT + DGLCK+G V  A ELL +M  K +  ++ TYNS+I G C A +  +A R  I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V T++ I+  LC++ +++ A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              K L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P   TYN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 302 ELDIRSYSCLID 313
             +   Y+  ID
Sbjct: 702 TAEPDVYNFYID 713


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 204/413 (49%), Gaps = 15/413 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGV------- 54
           +A+ +F ++   GC PN ITYS L++GLC+ G    A  ++ ++I  +   G        
Sbjct: 376 QASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGK 435

Query: 55  ---VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  +IDGLCK   V  A+ELL  M      P+ + Y+++I GFC     
Sbjct: 436 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKI 495

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F+ M   G  P V T++ ++D + K+ +++ A ++L  M++    PN   Y  +
Sbjct: 496 DNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAM 555

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K+ +++ +L L+ +M +KG 
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A  L  EM++         Y + + G  K    + +L 
Sbjct: 616 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLG 673

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS---LPRGVLIADVVTYNIMIH 348
           L   L           Y  LID   K+GRL+ A EL      L   + I     Y  +I 
Sbjct: 674 LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQ 733

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ALC   +++KA +L+ ++  KGV P+   F  L+ G I+ N+ ++ ++L + +
Sbjct: 734 ALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 200/426 (46%), Gaps = 32/426 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCR----TGHTIVAL--NLFEEMINGNGEFGVVC 56
           A  L  ++   GC P  + Y+  I  +C         ++AL   ++EEM+  +      C
Sbjct: 196 AYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASS------C 249

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + V        LC  G  D A +++  M  K   PD  TY+ VI   C A    +A  
Sbjct: 250 VLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFL 309

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A    + M  IG   N   Y  L+  + 
Sbjct: 310 LFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYL 369

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--------- 227
              ++ +A ++F  M   GC  N  +YS L++G CK  EI+ A  +Y++++         
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSD 429

Query: 228 -------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                  +  I P VVTY  L  GL + H+V  A +L D M  +G   +   Y   IDG 
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  LR+ KC     + +Y+ LID + K  RL +A ++   +       
Sbjct: 490 CKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTP 547

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  MI  LC  G+  KA  L   ME KG +P+ V +  L+ G  ++ +    ++L 
Sbjct: 548 NVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLF 607

Query: 399 HRMDER 404
            +M  +
Sbjct: 608 IQMSTK 613



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 24/418 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K+ G  P+V TY+ LI+  C+ G    A + F+EM +      + C  + V
Sbjct: 306 KAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS------IGCSANVV 359

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++    K   + +A ++  +M D    P+ +TY++++ G C A +  +A  ++ ++
Sbjct: 360 TYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKL 419

Query: 122 M----------------DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           +                   + PNVVT+  ++D LCK  K+ +A +LL+ M+  G  PN 
Sbjct: 420 IGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNH 479

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            +Y+ L+DGFC  G+++ A+E+F+ M   G    V +Y+ LI+   K++ ++ A+ + S+
Sbjct: 480 IIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ 539

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+     P VVTY  +  GL  I + ++A KL   M+  G + +   Y   IDGL K+G 
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +  +L+LF  +    C  +  +Y  LI+  C +G L  A  L   + +      +  Y  
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++       K   +  L  ++E+ G  P    +  L+    +     + +EL   M E
Sbjct: 660 VVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMME 715



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 207/460 (45%), Gaps = 63/460 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +   +++   C PNV+TY TL+ G  +       L   + +IN   + G  C P+  
Sbjct: 125 EAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ----LGWCKRIINMMMKEG--CNPNPS 178

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC--------------- 106
           ++ +++   C       A +LL +M D    P  V YN  I   C               
Sbjct: 179 LFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAE 238

Query: 107 --------------YANDSNEAK------------RLFIEMMDQGVQPNVVTFSVIMDEL 140
                           N +N A+            ++   MM +G  P+  T+S ++  L
Sbjct: 239 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFL 298

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+  K+E+A  L + M  +GV P+ + Y  L+D FC  G + +A+  F  M S+GC  NV
Sbjct: 299 CEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANV 358

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L++ Y K K++  A  +++ M+  G  P  +TY+ L  GL +  ++++A +++ +
Sbjct: 359 VTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTK 418

Query: 261 M----------------QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           +                    +A +   Y   IDGLCK   +V+A EL   +    CE +
Sbjct: 419 LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPN 478

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              Y  LIDG CK G++  A E+F  + +   +  V TY  +I A+  D ++D A  +  
Sbjct: 479 HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLS 538

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            M      P+ V +  ++ G  R  E  K ++LL  M+E+
Sbjct: 539 QMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK 578



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 186/441 (42%), Gaps = 48/441 (10%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC--------- 56
           +LK FG  P+  TY+ L+  L   G   +   + +EM        +F V C         
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 57  --------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI 102
                         K D V+ T +I GL +    D+A   L +M+  +  P+VVTY +++
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 103 RGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
            GF         KR+   MM +G  PN   F+ ++   C       A +LL+ M   G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 163 PNAFVYNTLMDGFCLTGRVNR------AKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P    YN  +   C    +        A++++  M +  C  N  + +      C   + 
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  +   M+ KG  P   TY+ +   L E  +VE+AF LF EM+  GV  D + Y   
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           ID  CK G I +A   F  +R + C  ++ +Y+ L+    K+ +L  A ++F+ +     
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDM----------------EAKGVAPDCVAFNT 380
             + +TY+ ++  LC  G++ KA +++  +                    +AP+ V +  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G  + ++     ELL  M
Sbjct: 450 LIDGLCKAHKVVDAQELLDAM 470



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 162/334 (48%), Gaps = 11/334 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L   + + GCEPN I Y  LI+G C+ G    A  +F  M     + G +  P  
Sbjct: 461 VDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM----SKCGYL--PTV 514

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT++ID + K+  +D A ++L QM + +  P+VVTY ++I G C   +  +A +L   
Sbjct: 515 HTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 574

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PNVVT++ ++D L K+GK++ + QL   M   G  PN   Y  L++  C  G 
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGL 634

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  L   M+       +  Y  ++ G+  +K+   +L L  E+ S G  P    Y  
Sbjct: 635 LDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGL 692

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA---YRTFIDGLCKNGYIVEALELFRTLR 297
           L     +  ++E A +L  EM     + +  +   Y + I  LC    + +A EL+  + 
Sbjct: 693 LIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEIT 752

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
                 ++  + CLI GL K  +   A +L +S+
Sbjct: 753 RKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 145/313 (46%), Gaps = 45/313 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  P V TY++LI+ + +     +A+ +  +M+  +      C P+ V 
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS------CTPNVVT 551

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDGLC+ G   KA +LL  M++K  +P+VVTY ++I G   +   + + +LFI+M 
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMS 611

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI----------------------- 159
            +G  PN VT+ V+++  C  G ++EA  LL  M Q                        
Sbjct: 612 TKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIAS 671

Query: 160 ----------GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS---YSIL 206
                     G  P A VY  L+D F   GR+  A EL   M  +    N+ S   Y+ L
Sbjct: 672 LGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSL 731

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I   C   ++E A  LYSE+  KG+ P +  +  L  GL ++++   A +L   +   GV
Sbjct: 732 IQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791

Query: 267 AADTWAYRTFIDG 279
               W      DG
Sbjct: 792 ---NWQSNNSFDG 801


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 198/403 (49%), Gaps = 10/403 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LFT ++    +P+V+TY  L+NGLC++GH   AL + + M +   +   VC PD  I  T
Sbjct: 153 LFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSD---VC-PDIAILNT 208

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN---PDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           ++DGLCK G + +A  + +  + ++++   P+ VTYN +   FC   D   A ++   M 
Sbjct: 209 VVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARME 267

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLL--ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +GV PNV+T + I+  LC+ G++  A +    +  +    R NA  Y+TL   F     
Sbjct: 268 KEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNN 327

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A ELF  M   G + +   Y  +I+G  +   +  A +  + M   G K     YN 
Sbjct: 328 VDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     ++  A++L +EM+  G+  D + Y T + GLCK G      EL   +    
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+  + ++  L+ G CK+G+   A  +F S+    +  + V YN +I  LC   ++D A 
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF +M  K V  +   +N L+ G        K  EL+ RM E
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 6/352 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD  I+ +++  L + G +    EL   M+D ++ PDVVTY  ++ G C +    +A ++
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 118 FIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQI-GVRPNAFVYNTLMD 173
              M   G  V P++   + ++D LCK G++++A   + E M  + G  PNA  YN L D
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--KGI 231
            FC  G +  A ++   ME  G   NV + + +I G C+   +  AL  + E  +     
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEA 308

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +   VTY+TL       + V+ A +LF EM  HG   D   Y T I GL + G +++A  
Sbjct: 309 RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACT 368

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
              +++    +LD ++Y+ LI G C+  +L  A+EL   +    L  DV TYN ++  LC
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             G      +L   M   G  P  V F TL+ G  +  +T + + +   MDE
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDE 480



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 159/323 (49%), Gaps = 7/323 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  +++  G  PNVIT +T+I GLCR G    AL  F E      E     + +AV 
Sbjct: 259 ACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE----ARGNAVT 314

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+         VD A EL  +M D    PD V Y ++I G   A    +A      M 
Sbjct: 315 YSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMK 374

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G + +   +++++   C+  K+ EA +LLE M  +G++P+ + YNTL+ G C  G  +
Sbjct: 375 KAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFS 434

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              EL   M   GC+ +V ++  L++GYCK  + + AL ++  M    I+P  V YNTL 
Sbjct: 435 AVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLI 494

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +  +V+ A KLFDEM+   V A+   Y   + GL       +A EL   +R  +C 
Sbjct: 495 DFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCT 554

Query: 303 LDIRSYSCLIDGLCKSG---RLK 322
            +  +   L++ L + G   RLK
Sbjct: 555 PNYVTVDVLMEWLPEIGETERLK 577



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 6/217 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A      +K  G + +   Y+ LI G CR      A  L EEM       GV  +PD 
Sbjct: 364 LDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMK------GVGLQPDV 417

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y T++ GLCK G      ELL  M D    P VVT+ +++ G+C A  ++EA R+F  
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +  +QPN V ++ ++D LCK+ +++ A +L + M +  V  N   YN L+ G      
Sbjct: 478 MDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKM 537

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             +A EL   M    C  N  +  +L+    +  E E
Sbjct: 538 AEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 129/331 (38%), Gaps = 76/331 (22%)

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E A  L + +      P+  ++N+L+      G +    ELF SM     K +V +Y IL
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 207 INGYCKNKEIEGALSLYSEMLSKG--IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +NG CK+  +  AL +   M S G  + P +   NT+  GL +I ++++A    DE  RH
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 265 -------------------------------------GVAADTWAYRTFIDGLCKNGYIV 287
                                                GVA +     T I GLC+ G + 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 288 EALELFRTLRILKCEL-------------------------------------DIRSYSC 310
            ALE FR  R +  E                                      D   Y  
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +I GL ++GRL  A     S+ +     D   YNI+I   C   K+ +A++L  +M+  G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + PD   +NTL+ G  +  + S V ELL  M
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHM 443



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K  G +P+V TY+TL++GLC+ G       L   MI+        C+P  V
Sbjct: 400 EAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG------CQPSVV 453

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++ G CK G  D+A  +   M +  I P+ V YN++I   C + + + A +LF EM
Sbjct: 454 TFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V  NV T++ ++  L      E+A +L++ M +    PN    + LM+     G  
Sbjct: 514 REKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGET 573

Query: 182 NRAK 185
            R K
Sbjct: 574 ERLK 577


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 208/402 (51%), Gaps = 14/402 (3%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGH--TIVAL--NLFEEMINGNGEFGVVCKPDAVI 62
           F K KA    P  I Y++++   C+ G+  T+ AL   + EE   GN   G        +
Sbjct: 110 FEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGN--LG--------L 159

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+++G  +    +K      ++K   ++P   TY  +++ F  A +  +A  +  EM 
Sbjct: 160 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMD 219

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV PN + +++IMD   + G    A ++ E M+  G++P+  +YN L+  FC  GR++
Sbjct: 220 KHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMD 279

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A  +  ++E+      + +Y+ +++GY K   I+ AL ++  + + G++P VV+YN+L 
Sbjct: 280 KALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL 339

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  Q+E A  + +EM  +GV  +  +Y    +G  + G + +A  +F+ ++     
Sbjct: 340 SGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA 399

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +DI +Y  L+   CKSG ++ A E+F  +    L  + +TY  M+      G++ KA DL
Sbjct: 400 IDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDL 459

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             DM+  G   D + + + +  C R+ +T +V E L  M E+
Sbjct: 460 LNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREK 501



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 157/309 (50%), Gaps = 6/309 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           +  ++   G  PN + Y+ +++G  R G    A  ++E+M++         KPD VIY  
Sbjct: 214 ILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG------LKPDIVIYNI 267

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++   CK G +DKA  +L  ++   + P + TY S++ G+    +  +A  +F  +   G
Sbjct: 268 LVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAG 327

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P VV+++ ++  L K  +ME A  +L  M+  GV PN   Y  L +G+   G V +A 
Sbjct: 328 LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAF 387

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +F  M+      ++ +Y  L+   CK+  ++ A  ++ ++   G+K   +TY T+  G 
Sbjct: 388 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGW 447

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++ +A  L ++MQ+HG   DT  Y +FI    ++G   E  E    +R  K E++ 
Sbjct: 448 ARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 507

Query: 306 RSYSCLIDG 314
           R+Y+ LI G
Sbjct: 508 RTYTTLIHG 516



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 177/390 (45%), Gaps = 9/390 (2%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           + F +LKA G  P   TY  ++    + G+   AL++ EEM     + GV   P+ +IY 
Sbjct: 178 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM----DKHGV--SPNKMIYA 231

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            I+DG  + G    A ++   M    + PD+V YN ++  FC A   ++A  +   +   
Sbjct: 232 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 291

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P + T++ I+D   K G +++A ++ + +   G+RP    YN+L+ G     ++  A
Sbjct: 292 RLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 351

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + +   M + G   N  SY+ L  GY +  ++E A  ++  M  + +   +V Y  L   
Sbjct: 352 RLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
             +   ++RA ++F ++   G+  +   Y T +DG  + G + +A +L   ++     LD
Sbjct: 412 CCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLD 471

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              Y+  I    +SG  +   E    +    L  +  TY  +IH   A    D+A   + 
Sbjct: 472 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 531

Query: 365 DMEAKGVAPDCVAFNTLMLG---CIRNNET 391
             +A G+  D    N L+ G   C   N T
Sbjct: 532 QAKASGLQLDSALSNCLLSGLISCASQNST 561



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 161/350 (46%)

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
           F V+ KP    Y  ++D   + G    A+     M+  +I P+V  Y S+I  +  A D 
Sbjct: 9   FQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDM 68

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
             A     EM+ QG+Q N   F  I+      G  E A    E      + P   VYN++
Sbjct: 69  EGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSI 128

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +  +C  G +   + L   ME  G + N+  Y+ ++NG+ + ++ E  LS +  + + G+
Sbjct: 129 VQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGL 188

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            PT  TY  +     +   + +A  + +EM +HGV+ +   Y   +DG  + G    A +
Sbjct: 189 SPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFK 248

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           ++  +     + DI  Y+ L+   CK+GR+  A  +  ++    L+  + TY  ++    
Sbjct: 249 VWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYV 308

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G + KA ++F  ++  G+ P  V++N+L+ G  +  +      +L+ M
Sbjct: 309 KGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM 358


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 228/498 (45%), Gaps = 98/498 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF ++   G EPN +TY+ LI+ LC+ G    AL LF++M               I
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  + G + +              P A  Y+ +I GLC+ G +    EL  +M ++ I 
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +  T+ ++I GFC     +EA RLF +M+D  V PN VTF+V+++  C  G + +A QL
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+++G++P+ + Y +L+ G CLT  V++A E    +E+     N FS + L+ G+ +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L+ EM  +G+K  +V++  +     + H  E++  LF EM+  GV  D   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 273 YRTFIDGL-----------------------------------CKNGYIVEA-------- 289
           Y   ID L                                   CK+GY+  A        
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 290 --------------LELFRTLRILKCELDIRS------------YSCLIDGLCKSGRLKI 323
                         L+ F T   ++   D+ S            ++ LI GLCK+G+++ 
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A +L   +       D ++Y+ +IH LC  G ++KA +L+ +M  KG+ PD VA+N  + 
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 384 GCIRNNETSKVVELLHRM 401
            C  + E+ K + +   M
Sbjct: 836 WCNVHGESDKALGIYTNM 853



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 211/425 (49%), Gaps = 44/425 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   G   + +TY TL+ G CR     +AL +  +MI      G V  P   
Sbjct: 251 EAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEA 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +ID L K+  V++A  L  ++ D  + P+V  YN++I   C     ++A RLF EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN VT+++++  LCK G +E+A  L + M   G++   + YN+L++G+C  G +
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 182 NRAK-----------------------------------ELFVSMESMGCKHNVFSYSIL 206
           +RA+                                   EL   M   G   N ++++ L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+CK+K+++ A  L+ +M+   + P  VT+N +  G   +  + +AF+L+D+M   G+
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D + YR+ I GLC    + +A E    L      L+  S + L+ G  + GR    + 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 327 LFHSLP-RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           L+  +  RGV + D+V++ I+++A       +K+  LF +M+ +GV PD + F T M+  
Sbjct: 605 LWDEMAVRGVKL-DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI-FYTCMIDA 662

Query: 386 IRNNE 390
           +   E
Sbjct: 663 LSKEE 667



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 218/504 (43%), Gaps = 110/504 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  KL   G  PNV  Y+ LI+ LC+      A  LF+EM  G G      +P+ V
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCK G ++ A  L  +M+DK I   V  YNS+I G+C     + A+ L   M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434

Query: 122 MDQGVQPNVVTFSVIMDELCKNG-----------------------------------KM 146
           + +G+ P   ++S ++  LC+NG                                   KM
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA++L + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  +V++  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++AL 
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRL------------------KIAWELF----- 328
            +  + +     +  +++ LI+ LCKSG L                  K  +  F     
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 329 -----------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                      HS      +A +V++NI+I  LC  GK+ +A DL   +   G +PDC++
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 794

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++T++    +  + +K  EL + M
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEM 818



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 192/396 (48%), Gaps = 6/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   G   +   Y+  I   C + +   A  L   M +     GV  K  AV 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  D VTY +++ GFC   +   A R+  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+    S ++DEL K   +EEA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK TV  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +  M   G+ PD   + +L+ G    +  SK  E +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 187/384 (48%), Gaps = 9/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF K+      PN +T++ +I G C  G+   A  L+++M+    E G+  KPD  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC    V KA E +  +++     +  +  +++ GF       E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++V+F++I+    K    E++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P   TYN  
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC- 728

Query: 242 FIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           F+  F     +E+A  L   M + G  A   ++   I GLCK G I EA++L   +    
Sbjct: 729 FLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SYS +I  LCK G +  A+EL++ +    L  DVV YNI I      G+ DKA 
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++ +M   GV P+   +  L+ G
Sbjct: 848 GIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 164/327 (50%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A++L  +M    ++ D   Y + IR +C + + + A+ L + M  +GV+ + V ++V+M 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCKN +++EA ++  +M+ IGV  +   Y TL+ GFC    +  A  +   M  +G   
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  + S +I+   K + +E A SL  ++   G+ P V  YN L   L +  + + A +LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM   G+  +   Y   I  LCK G I +AL LF  +R    ++ +  Y+ LI+G CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G L  A  L   + +  L     +Y+ +I  LC +G +    +L  +M  +G+A +   F
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
             L+ G  ++ +  +   L  +M + N
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSN 508



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 134/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  LF ++K  G +P+ I Y+ +I+ L +  + I ALN +++M+           P+ V
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 689

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I+ LCK G++  A+ L  +M   N+ P+  TYN  +  F    D  +AK L   M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++V+F++++  LCK GK++EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 750 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P   TY  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 242 FIGL 245
             G+
Sbjct: 869 LSGI 872



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  T S I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LID LCK+ R   A  LF  +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M  KG+      +N+L+ G  +     +   LL  M
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 228/498 (45%), Gaps = 98/498 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF ++   G EPN +TY+ LI+ LC+ G    AL LF++M               I
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  + G + +              P A  Y+ +I GLC+ G +    EL  +M ++ I 
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +  T+ ++I GFC     +EA RLF +M+D  V PN VTF+V+++  C  G + +A QL
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+++G++P+ + Y +L+ G CLT  V++A E    +E+     N FS + L+ G+ +
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 595

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L+ EM  +G+K  +V++  +     + H  E++  LF EM+  GV  D   
Sbjct: 596 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 655

Query: 273 YRTFIDGL-----------------------------------CKNGYIVEA-------- 289
           Y   ID L                                   CK+GY+  A        
Sbjct: 656 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 715

Query: 290 --------------LELFRTLRILKCELDIRS------------YSCLIDGLCKSGRLKI 323
                         L+ F T   ++   D+ S            ++ LI GLCK+G+++ 
Sbjct: 716 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 775

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A +L   +       D ++Y+ +IH LC  G ++KA +L+ +M  KG+ PD VA+N  + 
Sbjct: 776 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 384 GCIRNNETSKVVELLHRM 401
            C  + E+ K + +   M
Sbjct: 836 WCNVHGESDKALGIYTNM 853



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 218/504 (43%), Gaps = 110/504 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  KL   G  PNV  Y+ LI+ LC+      A  LF+EM  G G      +P+ V
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCK G ++ A  L  +M+DK I   V  YNS+I G+C     + A+ L   M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434

Query: 122 MDQGVQPNVVTFSVIMDELCKNG-----------------------------------KM 146
           + +G+ P   ++S ++  LC+NG                                   KM
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA++L + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  +V++  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++AL 
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRL------------------KIAWELF----- 328
            +  + +     +  +++ LI+ LCKSG L                  K  +  F     
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 329 -----------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                      HS      +A +V++NI+I  LC  GK+ +A DL   +   G +PDC++
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 794

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++T++    +  + +K  EL + M
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEM 818



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 207/413 (50%), Gaps = 44/413 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   + +TY TL+ G CR     +AL +  +MI      G V  P     + +ID L K+
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKK 316

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             V++A  L  ++ D  + P+V  YN++I   C     ++A RLF EM  +G++PN VT+
Sbjct: 317 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK-------- 185
           ++++  LCK G +E+A  L + M   G++   + YN+L++G+C  G ++RA+        
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 186 ---------------------------ELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                                      EL   M   G   N ++++ LING+CK+K+++ 
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+ +M+   + P  VT+N +  G   +  + +AF+L+D+M   G+  D + YR+ I 
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLI 337
           GLC    + +A E    L      L+  S + L+ G  + GR    + L+  +  RGV +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            D+V++ I+++A       +K+  LF +M+ +GV PD + F T M+  +   E
Sbjct: 617 -DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI-FYTCMIDALSKEE 667



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 192/400 (48%), Gaps = 6/400 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   G   +   Y+  I   C + +   A  L   M +         K  AV 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG------VKASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  D VTY +++ GFC   +   A R+  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+    S ++DEL K   +EEA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK TV  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +  M   G+ PD   + +L+ G    +  SK  E +  ++
Sbjct: 536 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 184/383 (48%), Gaps = 7/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF K+      PN +T++ +I G C  G+   A  L+++M+    E G+  KPD  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC    V KA E +  +++     +  +  +++ GF       E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++V+F++I+    K    E++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P   TYN  
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                    +E+A  L   M + G  A   ++   I GLCK G I EA++L   +     
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGF 788

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  SYS +I  LCK G +  A+EL++ +    L  DVV YNI I      G+ DKA  
Sbjct: 789 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 848

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           ++ +M   GV P+   +  L+ G
Sbjct: 849 IYTNMIRSGVQPNWDTYRALLSG 871



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 164/327 (50%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A++L  +M    ++ D   Y + IR +C + + + A+ L + M  +GV+ + V ++V+M 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCKN +++EA ++  +M+ IGV  +   Y TL+ GFC    +  A  +   M  +G   
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  + S +I+   K + +E A SL  ++   G+ P V  YN L   L +  + + A +LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM   G+  +   Y   I  LCK G I +AL LF  +R    ++ +  Y+ LI+G CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G L  A  L   + +  L     +Y+ +I  LC +G +    +L  +M  +G+A +   F
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
             L+ G  ++ +  +   L  +M + N
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSN 508



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 134/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  LF ++K  G +P+ I Y+ +I+ L +  + I ALN +++M+           P+ V
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 689

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I+ LCK G++  A+ L  +M   N+ P+  TYN  +  F    D  +AK L   M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++V+F++++  LCK GK++EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 750 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P   TY  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 242 FIGL 245
             G+
Sbjct: 869 LSGI 872



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  T S I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LID LCK+ R   A  LF  +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M  KG+      +N+L+ G  +     +   LL  M
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 228/498 (45%), Gaps = 98/498 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------I 46
           +A  LF ++   G EPN +TY+ LI+ LC+ G    AL LF++M               I
Sbjct: 379 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438

Query: 47  NGNGEFGVVCK--------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
           NG  + G + +              P A  Y+ +I GLC+ G +    EL  +M ++ I 
Sbjct: 439 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 498

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +  T+ ++I GFC     +EA RLF +M+D  V PN VTF+V+++  C  G + +A QL
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+++G++P+ + Y +L+ G CLT  V++A E    +E+     N FS + L+ G+ +
Sbjct: 559 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFR 618

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L+ EM  +G+K  +V++  +     + H  E++  LF EM+  GV  D   
Sbjct: 619 EGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIF 678

Query: 273 YRTFIDGL-----------------------------------CKNGYIVEA-------- 289
           Y   ID L                                   CK+GY+  A        
Sbjct: 679 YTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEML 738

Query: 290 --------------LELFRTLRILKCELDIRS------------YSCLIDGLCKSGRLKI 323
                         L+ F T   ++   D+ S            ++ LI GLCK+G+++ 
Sbjct: 739 AGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQE 798

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A +L   +       D ++Y+ +IH LC  G ++KA +L+ +M  KG+ PD VA+N  + 
Sbjct: 799 AIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858

Query: 384 GCIRNNETSKVVELLHRM 401
            C  + E+ K + +   M
Sbjct: 859 WCNVHGESDKALGIYTNM 876



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 207/413 (50%), Gaps = 44/413 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   + +TY TL+ G CR     +AL +  +MI      G V  P     + +ID L K+
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEANCSFMIDELRKK 339

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             V++A  L  ++ D  + P+V  YN++I   C     ++A RLF EM  +G++PN VT+
Sbjct: 340 ELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 399

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK-------- 185
           ++++  LCK G +E+A  L + M   G++   + YN+L++G+C  G ++RA+        
Sbjct: 400 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 459

Query: 186 ---------------------------ELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                                      EL   M   G   N ++++ LING+CK+K+++ 
Sbjct: 460 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 519

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+ +M+   + P  VT+N +  G   +  + +AF+L+D+M   G+  D + YR+ I 
Sbjct: 520 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 579

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLI 337
           GLC    + +A E    L      L+  S + L+ G  + GR    + L+  +  RGV +
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
            D+V++ I+++A       +K+  LF +M+ +GV PD + F T M+  +   E
Sbjct: 640 -DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI-FYTCMIDALSKEE 690



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 218/504 (43%), Gaps = 110/504 (21%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  KL   G  PNV  Y+ LI+ LC+      A  LF+EM  G G      +P+ V
Sbjct: 344 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 397

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LCK G ++ A  L  +M+DK I   V  YNS+I G+C     + A+ L   M
Sbjct: 398 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 457

Query: 122 MDQGVQPNVVTFSVIMDELCKNG-----------------------------------KM 146
           + +G+ P   ++S ++  LC+NG                                   KM
Sbjct: 458 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 517

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA++L + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 518 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 577

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 578 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 637

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  +V++  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++AL 
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 697

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRL------------------KIAWELF----- 328
            +  + +     +  +++ LI+ LCKSG L                  K  +  F     
Sbjct: 698 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 329 -----------HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
                      HS      +A +V++NI+I  LC  GK+ +A DL   +   G +PDC++
Sbjct: 758 TEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 817

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           ++T++    +  + +K  EL + M
Sbjct: 818 YSTIIHELCKMGDINKAFELWNEM 841



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 194/400 (48%), Gaps = 6/400 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF K+   G   +   Y+  I   C + +   A  L   M +     GV  K  AV 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 258

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  D VTY +++ GFC   +   A R+  +M+
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+    S ++DEL K   +EEA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 378

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK TV  YN+L 
Sbjct: 379 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 439 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 498

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  +++ LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           +  M   G+ PD   + +L+ G    +  SK  E +  ++
Sbjct: 559 YDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 187/384 (48%), Gaps = 9/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA LF K+      PN +T++ +I G C  G+   A  L+++M+    E G+  KPD  
Sbjct: 519 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 572

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++I GLC    V KA E +  +++     +  +  +++ GF       E   L+ EM
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++V+F++I+    K    E++  L   M + GV+P+   Y  ++D       +
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P   TYN  
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC- 751

Query: 242 FIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           F+  F     +E+A  L   M + G  A   ++   I GLCK G I EA++L   +    
Sbjct: 752 FLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 810

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SYS +I  LCK G +  A+EL++ +    L  DVV YNI I      G+ DKA 
Sbjct: 811 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 870

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            ++ +M   GV P+   +  L+ G
Sbjct: 871 GIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 164/327 (50%)

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMD 138
           A++L  +M    ++ D   Y + IR +C + + + A+ L + M  +GV+ + V ++V+M 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264

Query: 139 ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
            LCKN +++EA ++  +M+ IGV  +   Y TL+ GFC    +  A  +   M  +G   
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 324

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +  + S +I+   K + +E A SL  ++   G+ P V  YN L   L +  + + A +LF
Sbjct: 325 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 384

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            EM   G+  +   Y   I  LCK G I +AL LF  +R    ++ +  Y+ LI+G CK 
Sbjct: 385 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 444

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G L  A  L   + +  L     +Y+ +I  LC +G +    +L  +M  +G+A +   F
Sbjct: 445 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504

Query: 379 NTLMLGCIRNNETSKVVELLHRMDERN 405
             L+ G  ++ +  +   L  +M + N
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDSN 531



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 134/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  LF ++K  G +P+ I Y+ +I+ L +  + I ALN +++M+           P+ V
Sbjct: 659 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 712

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +I+ LCK G++  A+ L  +M   N+ P+  TYN  +  F    D  +AK L   M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++V+F++++  LCK GK++EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 773 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P   TY  L
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 242 FIGL 245
             G+
Sbjct: 892 LSGI 895



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%)

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  T S I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+ L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+    VTY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +Y+ LID LCK+ R   A  LF  +    L  + VTY I+IHALC  G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           LF  M  KG+      +N+L+ G  +     +   LL  M
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 457


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 212/383 (55%), Gaps = 7/383 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A     ++   G E NV+TY++LI+G    G    A    E ++   GE G++   + V 
Sbjct: 237 AVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERA----EMVLKLMGERGIL--RNKVT 290

Query: 63  YTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            T +I G C++  +++A+++L +M + + +  D   Y  +I G+C     ++A RL  EM
Sbjct: 291 LTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEM 350

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G++ N+   + +++  CKNG++ EA +LL  M+   + P ++ Y+TLMDGFC  G V
Sbjct: 351 LNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLV 410

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  ++  M  +G + NV +++ L+ G C+    E AL ++  ML +G+ P  V+Y TL
Sbjct: 411 TKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              LF++ +  RA  L++++   G    T+A+ T I+G CK   ++EA E F  ++ L  
Sbjct: 471 LDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  +Y  LIDG CK G ++ A+++   + +  ++  +  YN +I  L    K  +  D
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M  KG++P+ V + TL+ G
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAG 613



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 215/404 (53%), Gaps = 12/404 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F ++K  G EP+ +TY TLI+G C+ G+   A  + E+M     E   +  P  
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM-----EKEAIL-PSI 569

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y ++I GL K     +  +LL +M  K ++P+VVTY ++I G+C     ++A   + +
Sbjct: 570 ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFD 629

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM---DGFCL 177
           M+++G  PNV+  S I+  L + G+++EA+ LL+ M+ + V  +   ++ L    DG   
Sbjct: 630 MIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLD 689

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           + ++  A  L  S +S    ++V  Y+I I G CK+ +++ A  ++S +L +G  P   T
Sbjct: 690 SQKI--ADTLDESSKSFSLPNSVV-YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G      V  AF L DEM + G+A +   Y   I+GLCK+G +  A +LF  L 
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     ++ SY+ LIDG CK+G  + A +L + + +  +   ++TY+ +I+  C  G M 
Sbjct: 807 LKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMG 866

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           KA +L  +M       +   F  L+ G ++  E  K+ +L + M
Sbjct: 867 KATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 215/470 (45%), Gaps = 76/470 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++  +  EP   +YSTL++G CR G    A++++ EM+       V  + + V
Sbjct: 377 EAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLR------VGIQSNVV 430

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY----------------------- 98
            + +++ GLC+ G  + A  +   M  + + PD V+Y                       
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 99  ------------NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                       N++I GFC      EA+  F  M + G +P+ VT+  ++D  CK G +
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           EEA ++ E M +  + P+  +YN+L+ G   + +     +L   M   G   NV +Y  L
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR--- 263
           I G+C    ++ A + Y +M+ KG  P V+  + +   L+ + +++ A  L  +M     
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDV 670

Query: 264 ---HGV----------------AADTW-------------AYRTFIDGLCKNGYIVEALE 291
              HG                  ADT               Y   I GLCK+G + +A +
Sbjct: 671 FLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKK 730

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F +L +     D  +Y  LI G   +G +  A+ L   + +  L  +++TYN +I+ LC
Sbjct: 731 IFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLC 790

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G +D+A  LF  +  KG+AP+ +++N L+ G  +N  T + ++L ++M
Sbjct: 791 KSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKM 840



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 196/405 (48%), Gaps = 12/405 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A AL+  + A G   +   ++T+ING C+    I A    EE  N   E G   +PD V
Sbjct: 482 RALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA----EETFNRMKELGF--EPDGV 535

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+IDG CK G V++A ++  +M+ + I P +  YNS+I G   +  + E   L  EM
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNVVT+  ++   C  G++++A      MI+ G  PN  + + ++      GR+
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRI 655

Query: 182 NRAKELFVSMESMGC--KHNVFS-YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           + A  L   M ++     H  F       +G   +++I   L   S+  S    P  V Y
Sbjct: 656 DEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSL---PNSVVY 712

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N    GL +  +V+ A K+F  +   G + D + Y T I G    G + +A  L   +  
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK 772

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                +I +Y+ LI+GLCKSG L  A +LF  L    L  +V++YNI+I   C +G   +
Sbjct: 773 RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTRE 832

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A DL   M  +G++P  + ++ L+ G  +  +  K   LL  M E
Sbjct: 833 ALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 194/378 (51%), Gaps = 6/378 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
            Y  LI+G CR      A+ L +EM+N      V  + +  I   +I+G CK G V +A+
Sbjct: 326 AYGVLIDGYCRVCKMDDAVRLRDEMLN------VGLRMNLFICNALINGYCKNGQVSEAE 379

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
            LL++M D ++ P+  +Y++++ GFC      +A  ++ EM+  G+Q NVVT + ++  L
Sbjct: 380 RLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGL 439

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C+ G  E+A  +  LM++ GV P+   Y TL+D     G   RA  L+  + + G   + 
Sbjct: 440 CRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRST 499

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           ++++ +ING+CK +++  A   ++ M   G +P  VTY TL  G  ++  VE AFK+ ++
Sbjct: 500 YAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEK 559

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M++  +      Y + I GL K+    E ++L   + +     ++ +Y  LI G C  GR
Sbjct: 560 MEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGR 619

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           L  A+  +  +       +V+  + ++ +L   G++D+A+ L   M    V  D   F+ 
Sbjct: 620 LDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDR 679

Query: 381 LMLGCIRNNETSKVVELL 398
           L      N ++ K+ + L
Sbjct: 680 LHKADDGNLDSQKIADTL 697



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 41/418 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G   N+   + LING C+ G    A  L   M++ + E      P++ 
Sbjct: 342 DAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE------PESY 395

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++DG C+EG V KA  +  +M    I  +VVT+NS+++G C      +A  ++  M
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM 455

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+ V++  ++D L K G+   A  L   ++  G   + + +NT+++GFC   ++
Sbjct: 456 LKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKM 515

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+E F  M+ +G + +  +Y  LI+GYCK   +E A  +  +M  + I P++  YN+L
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSL 575

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GLF+  +      L  EM   G++ +   Y T I G C  G + +A   +  +     
Sbjct: 576 IGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635

Query: 302 ELDIRSYSCLIDGLCKSGRLKIA------------------WELFHSLPRGVL----IAD 339
             ++   S ++  L + GR+  A                  ++  H    G L    IAD
Sbjct: 636 APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIAD 695

Query: 340 V-------------VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                         V YNI I  LC  GK+D A  +F  +  +G +PD   + TL+ G
Sbjct: 696 TLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHG 753



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 177/367 (48%), Gaps = 24/367 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L +++   G  PNV+TY TLI G C  G    A   + +MI    E G    P+ +
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI----EKGFA--PNVI 640

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I + I+  L + G +D+A  LL +M    +N DV   +        A+D N   +   + 
Sbjct: 641 ICSKIVSSLYRLGRIDEANMLLQKM----VNLDVFLDHGYFDRLHKADDGNLDSQKIADT 696

Query: 122 MDQGVQ----PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +D+  +    PN V +++ +  LCK+GK+++A ++   ++  G  P+ F Y TL+ G+  
Sbjct: 697 LDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSA 756

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G VN A  L   M   G   N+ +Y+ LING CK+  ++ A  L+ ++  KG+ P V++
Sbjct: 757 AGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVIS 816

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  G  +      A  L ++M + G++     Y   I G CK G + +A  L   +R
Sbjct: 817 YNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM----------I 347
            L  + +I  +  L++G  K G +K   +L + +   +  A V+++  M          +
Sbjct: 877 ELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDVFSNAKEM 936

Query: 348 HALCADG 354
             LC DG
Sbjct: 937 LKLCVDG 943



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 193/392 (49%), Gaps = 9/392 (2%)

Query: 13  FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK 72
           F   P V  +  ++   C  G    AL++F+ M    G+ G  C P       ++  L +
Sbjct: 144 FKFSPTV--FDMILKIYCEKGMIKNALHVFDNM----GKLG--CVPSLRSCNRLLSSLVR 195

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           +G    A  +   +    I PDV T + ++  +C     N A     EM   G + NVVT
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D     G ME A  +L+LM + G+  N      L+ G+C   ++  A+++   ME
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 193 -SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
            S G   + ++Y +LI+GYC+  +++ A+ L  EML+ G++  +   N L  G  +  QV
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
             A +L   M    +  ++++Y T +DG C+ G + +A+ ++  +  +  + ++ +++ L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           + GLC+ G  + A  ++H + +  +  D V+Y  ++  L   G+  +A  L+ D+ A+G 
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
                AFNT++ G  +  +  +  E  +RM E
Sbjct: 496 GRSTYAFNTMINGFCKMEKMIEAEETFNRMKE 527



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 21/348 (6%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELL--LQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +P+   +  ++  L +    D+ +  L  L    KN    +V +N ++R F         
Sbjct: 91  RPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVF--------- 141

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                   D    P V  F +I+   C+ G ++ A  + + M ++G  P+    N L+  
Sbjct: 142 -------EDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSS 192

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
               G  + A  ++  +  +G   +VF+ SI++N YCK+  +  A+    EM   G +  
Sbjct: 193 LVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELN 252

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           VVTYN+L  G   I  +ERA  +   M   G+  +       I G C+   + EA ++ R
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312

Query: 295 TL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
            + R     LD  +Y  LIDG C+  ++  A  L   +    L  ++   N +I+  C +
Sbjct: 313 EMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G++ +A  L + M    + P+  +++TLM G  R    +K + + + M
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 15/201 (7%)

Query: 207 INGYCKNKEIEGALSLYSEM---LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +N +CK   I     +Y E    L++ + P+   Y++L +     +++ R F+ F     
Sbjct: 94  VNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVW----NELVRVFEDF----- 144

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
                    +   +   C+ G I  AL +F  +  L C   +RS + L+  L + G    
Sbjct: 145 ---KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSN 201

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A  ++  + R  ++ DV T +IM++A C DG ++ A D   +M+  G   + V +N+L+ 
Sbjct: 202 AILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLID 261

Query: 384 GCIRNNETSKVVELLHRMDER 404
           GC+   +  +   +L  M ER
Sbjct: 262 GCVSIGDMERAEMVLKLMGER 282


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 167/309 (54%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD +TY  ++   C     ++A     EM  +G++P+   ++ ++  LC+  K+EEA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E M++  + PN   YNTL++G C   R+  A ELF  M   G      SY+ LI+G+CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            K++  A  ++ +M+     P VVTY TL  GL +  +V+ A ++ D M + GV  +   
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   IDG CK   + EA +L   +        + +Y+ L++ LC++ +L+ A++LF  + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           +      VVTYN ++ ALC   ++D AH L+ +M AKG  PD + ++TL  G  R  +  
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 393 KVVELLHRM 401
           +  EL+ +M
Sbjct: 307 EAQELMEKM 315



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 164/315 (52%), Gaps = 6/315 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +TY  ++  LC+T     AL   EEM           KPDA IY  ++ GLC+E  V
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRG------IKPDAFIYNFVLSGLCQEEKV 60

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A+ L  +M  + INP+VVTYN++I G C A     A  LF EM  +G  P  V+++ +
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D  CK   +  A  + + M++    PN   Y TL+DG   +G+V  A E+   M   G 
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             NV +YS LI+G+CK + ++ A  L  +M+++GI PTVVTYN L   L    ++E AFK
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF  M +         Y T +  LC +  +  A  L+  +    C  D  +Y  L  GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 317 KSGRLKIAWELFHSL 331
           ++G++  A EL   +
Sbjct: 301 RAGKVHEAQELMEKM 315



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 6/299 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A   ++   G +P+   Y+ +++GLC+      A  LFE+M+           P+ V
Sbjct: 27  DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR------INPNVV 80

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+GLCK   ++ A EL  +M  K   P  V+YN++I GFC   D   AK +F +M
Sbjct: 81  TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 140

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVVT++ ++D L K+GK++ A+++L+ M++ GV PN   Y+ L+DGFC   RV
Sbjct: 141 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 200

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M + G    V +Y+IL+N  C+  ++E A  L+  M  +   PTVVTYNTL
Sbjct: 201 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 260

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              L    Q++ A +L+ EM   G   D   Y T   GL + G + EA EL   +++ K
Sbjct: 261 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 165/310 (53%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PDA+ Y  I++ LCK   +D A   + +M  + I PD   YN V+ G C      EA+ L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M+ Q + PNVVT++ +++ LCK  ++E A +L + M   G  P    YNTL+DGFC 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
              +  AK++F  M    C  NV +Y+ LI+G  K+ +++ A  +   M+ KG+ P V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y+ L  G  ++ +V+ A KL ++M   G+A     Y   ++ LC+   + +A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +C   + +Y+ L+  LC   +L  A  L+  +       D +TY+ +   L   GK+ 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 358 KAHDLFLDME 367
           +A +L   M+
Sbjct: 307 EAQELMEKMK 316



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 133/242 (54%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+A  Y  +++  C T R++ A      M + G K + F Y+ +++G C+ +++E A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           + +M+ + I P VVTYNTL  GL +  ++E A++LF EM   G      +Y T IDG CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 283 NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVT 342
              +V A ++F  +    C  ++ +Y+ LIDGL KSG+++ A E+   + +  +  +V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 343 YNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           Y+ +I   C   ++D+AH L   M  +G+AP  V +N L+    R ++     +L   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 403 ER 404
           +R
Sbjct: 247 QR 248



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 1/145 (0%)

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M R+    D   Y   ++ LCK   I +AL     +     + D   Y+ ++ GLC+  +
Sbjct: 1   MARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK 59

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++ A  LF  + +  +  +VVTYN +I+ LC   +++ A++LF +M  KG  P  V++NT
Sbjct: 60  VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           L+ G  +  +     ++  +M   N
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSN 144



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  +    C P V+TY+TL+  LC       A  L+ EMI         C PDA+
Sbjct: 237 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG------CPPDAI 290

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
            Y T+  GL + G V +A+EL+ +MK    NP
Sbjct: 291 TYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 200/389 (51%), Gaps = 15/389 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L   G  P+V +Y+ L+NGLC    +  AL L   M +  G+    C PD V
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVV 89

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G  KEG +DK       M D+ I+P+VVTYNS+I   C A   ++A  +   M
Sbjct: 90  SYSTVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+ +T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR 
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++F SM   G K ++ +Y  L+ GY     +     L   M+  GI P    ++ L
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +VE A  +F +M++ G+  +   Y T ID LCK+G + +A+  F  +     
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             D   Y+ LI  LC   + + A ELF   L RG+ ++  + +N +I + C +G++ ++ 
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS-TIFFNSIIDSHCKEGRVIESG 381

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            LF  M   GV PD +      LG  R +
Sbjct: 382 KLFDLMVRIGVKPDIITLGRF-LGSARRD 409



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 184/349 (52%), Gaps = 12/349 (3%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAK 115
           PD   Y  +++GLC E    +A ELL  M D   +  PDVV+Y++VI GF    D ++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
                M+DQ + PNVVT++ I+  LCK   +++A ++L  M++ GV P+   YN+++ GF
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +G+   A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KP +
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TY TL  G      +     L D M R+G+  + + +   +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      +  +Y  +ID LCKSGR++ A   F  +    L  D + YN +IH+LC   K
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
            +KA +LFL+M  +G+    + FN+++    +     E+ K+ +L+ R+
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 211/432 (48%), Gaps = 41/432 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TY++L++ LC+ G    A  +F+ M           KPD  
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ ++  +       EA  +F +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN VT+  ++D LCK+G++E+A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +A+ELF+ M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++T   
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--- 398

Query: 241 LFIGLFEIHQVERAFKLF-------DEMQRHG--------------VAADTWA------Y 273
             +G F +    R + LF         M   G               A+++        Y
Sbjct: 399 --LGRF-LGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTY 455

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + GLCKN    +AL +F+ L ++  +L+ R+++ +ID L K GR   A +LF +   
Sbjct: 456 NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 515

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
             L+ +  TY +M   +   G +++   LFL ME  G   D    N ++   ++  E ++
Sbjct: 516 NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITR 575

Query: 394 VVELLHRMDERN 405
               L  +DE++
Sbjct: 576 AGTYLSMIDEKH 587



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 154/314 (49%), Gaps = 9/314 (2%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEAS 150
           PDV +YN ++ G C  N S EA  L   M D G    P+VV++S +++   K G +++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
                M+   + PN   YN+++   C    V++A E+  +M   G   +  +Y+ +++G+
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C + + + A+    +M S G++P VVTYN+L   L +  +   A K+FD M + G+  D 
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T + G    G +VE   L   +       +   +S L+    K  +++ A  +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L  + VTY  +I  LC  G+++ A   F  M  +G+ PD + +N+L+      ++
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 391 TSKVVELLHRMDER 404
             K  EL   M +R
Sbjct: 342 WEKAEELFLEMLDR 355



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 188/425 (44%), Gaps = 66/425 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG------EFGV- 54
           EA  +F  +   G +P++ TY TL+ G    G  +    L + M+  NG       F + 
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 262

Query: 55  VC-----------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           VC                        P+AV Y T+ID LCK G V+ A     QM D+ +
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD + YNS+I   C  +   +A+ LF+EM+D+G+  + + F+ I+D  CK G++ E+ +
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-------MESMGCKHN----- 199
           L +LM++IGV+P+       +      G   R   LFV+       M + G K       
Sbjct: 383 LFDLMVRIGVKPDIITLGRFL------GSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436

Query: 200 ---------------VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
                          + +Y+I+++G CKNK  + AL ++  +    +K    T+N +   
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L ++ + + A  LF     +G+  + W YR   + +   G + E  +LF ++    C +D
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
               + ++  L + G +  A      +       +  T ++ I  L + GK  + H +FL
Sbjct: 557 SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYH-IFL 614

Query: 365 DMEAK 369
             + K
Sbjct: 615 PEKYK 619



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 10/260 (3%)

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYS 204
           E+A  + + +++ G+ P+ F YN L++G C   R   A EL   M   G  C  +V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING+ K  +++       +ML + I P VVTYN++   L +   V++A ++   M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  D   Y + + G C +G   EA+   + +R    E D+ +Y+ L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ++F S+ +  L  D+ TY  ++      G + + H L   M   G+ P+   F+ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  + + +  +M ++
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQ 285


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 196/383 (51%), Gaps = 8/383 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F  +    CEP + TY+ L++GLC+      A ++FEEMI          KPD +
Sbjct: 181 KAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG------YKPDII 234

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++IDGL K G VD+A++L+  M  +   P  V Y S++ G C      EA +   EM
Sbjct: 235 AYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 294

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P V T+S I+      GK+E+A  ++E M      P+   Y   ++     GR 
Sbjct: 295 RRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 354

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++F +M   GCK ++ +Y I+I+ +CK   +  A  +   M    +KP    Y  +
Sbjct: 355 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +  ++E A +L+  + + G+   T  Y T I+ LCK   + EALEL R ++  K 
Sbjct: 415 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 474

Query: 302 ELD--IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           EL+  I +YS +I GL K G  + A++L   +    +I D  TY  +I  L   GK+ +A
Sbjct: 475 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 534

Query: 360 HDLFLDMEAKGVAPDCVAFNTLM 382
            +L  +M   G+ PD   + TL+
Sbjct: 535 MELLEEMLKAGIFPDDHTYGTLV 557



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 51/427 (11%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEM----INGNGEFGVVCKPDAVIYTTIIDGLC 71
           EPNV +++ L+ G        V   L  EM    I  NG            +  I+  LC
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNG----------ATHGVILSALC 174

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
               +DKA      +      P + TY  ++ G C A+    A  +F EM+ +G +P+++
Sbjct: 175 ARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDII 234

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            +S ++D L K G+++EA +L++LM+  G  P A  Y +++ G C  GR+  A +    M
Sbjct: 235 AYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 294

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
                +  V +YS ++ GY    ++E A ++  EM  +   P  ++Y      L+ I + 
Sbjct: 295 RRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 354

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A K+F+ M   G   D   Y   ID  CK G +  A  + R +     + +   Y+ +
Sbjct: 355 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 414

Query: 312 IDGLCKSGRLKIAWELFHS------LPRGV------------------------------ 335
           +DG  KS RL+ A EL+        LP  V                              
Sbjct: 415 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 474

Query: 336 -LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            L   +VTY+++IH L   G  ++A DL  +M   GV PDC  + +L+       + S+ 
Sbjct: 475 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 534

Query: 395 VELLHRM 401
           +ELL  M
Sbjct: 535 MELLEEM 541



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 190/392 (48%), Gaps = 9/392 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G    + T ++L+  L R GH   AL  F+  I+         +P+   +  ++ G    
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---------EPNVSSFNILLRGFAAR 141

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
              +    LL +MK + I  +  T+  ++   C   D ++A   F  +     +P + T+
Sbjct: 142 DDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTY 201

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +V++D LCK  K+E A  + E MI+ G +P+   Y++L+DG    GRV+ A++L   M +
Sbjct: 202 TVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVA 261

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G      +Y+ ++ G CK   I+ A+    EM  + ++P V TY+ +  G   + +VE+
Sbjct: 262 RGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEK 321

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           AF + +EM     A DT +Y  FI+ L   G   EA ++F T+    C+ D+ +Y  +ID
Sbjct: 322 AFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 381

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK G +  A  +   + +  +  +   Y +++       ++++A +L+  +   G+ P
Sbjct: 382 NFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILP 441

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             V +NT++    +  +  + +ELL  M  R 
Sbjct: 442 STVTYNTVINALCKLKKMDEALELLREMQRRK 473



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 19/258 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  +   GC+P++ TY  +I+  C+ G    A ++   M           KP+  
Sbjct: 356 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA------AVKPNRY 409

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IYT I+DG  K   +++A EL  ++    I P  VTYN+VI   C     +EA  L  EM
Sbjct: 410 IYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREM 469

Query: 122 M--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
               + ++P++VT+S+I+  L K G  E A  LL  MI  GV P+ F Y +L+      G
Sbjct: 470 QRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 529

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +V+RA EL   M   G   +  +Y  L+   C++ +++ A  L  EM+  G  P   T+ 
Sbjct: 530 KVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFK 588

Query: 240 TLFIGLFEIHQVERAFKL 257
                      VE+ F+L
Sbjct: 589 A----------VEKGFRL 596


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 182/342 (53%), Gaps = 6/342 (1%)

Query: 30  CRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
           C+      A+ L +EM +        C PD V Y  +++G+C+EG VD A E L  +   
Sbjct: 3   CKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 56

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
              P+ V+YN V++G C A    +A+ L  EM  +G  PNVVTF++++  LC+ G +E A
Sbjct: 57  GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++LE + + G  PN+  YN L+  FC   ++++A      M S GC  ++ SY+ L+  
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C++ E++ A+ L  ++  KG  P +++YNT+  GL +  + + A +L +EM   G+  D
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y T   GLC+   I +A+  F  ++ +    +   Y+ +I GLCK      A +LF 
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 296

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            +     + +  TY I+I  L  +G + +A DL  ++ ++GV
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 338



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 184/336 (54%), Gaps = 7/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC P+++TY+ ++NG+C+ G    A+   + + +    +G  C+P+ V
Sbjct: 10  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 63

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GLC     + A+EL+ +M  K   P+VVT+N +I   C       A  +  ++
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN ++++ ++   CK  KM++A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++P ++TY+T+
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +    C
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             +  +Y+ LI+GL   G +K A +L   L  RGV+
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 167/334 (50%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK     +A +LL +M+DK   PD+VTYN V+ G C     ++A      +   G +PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           V++++++  LC   + E+A +L+  M Q G  PN   +N L+   C  G V  A E+   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +   GC  N  SY+ L++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V+ A +L  +++  G A    +Y T IDGL K G   EALEL   +     + DI +YS 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +  GLC+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M   G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P+   +  L+ G        +  +LL  +  R
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 336


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 32/426 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI------VALNLFEEMINGNGEFGVVC 56
           A  LF ++   GC P  + Y+  I  +C            +A  ++EEM+  +      C
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVAS------C 413

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
             + +        LC  G  +KA +++ +M  K   PD  TY  VI   C A   ++A  
Sbjct: 414 VLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFL 473

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM   GV P+V T+++++D  CK G +E+A    + M   G  PN   Y  L+  + 
Sbjct: 474 LFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYL 533

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--------- 227
            + ++ +A ++F  M    C  N  +YS LI+G CK  EI+ A  +Y++++         
Sbjct: 534 KSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESD 593

Query: 228 -------SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                  +  I P VVTY  L  GL +  +V  A  L D M   G   +   Y   +DG 
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653

Query: 281 CKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           CK G I  A E+F  LR+ KC     + +Y+ LID + K GRL +A ++   + +     
Sbjct: 654 CKVGEIDSAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           +VVTY  M+  LC  G+ +KA +L   ME KG +P+ V +  L+ G  +  +    +EL 
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771

Query: 399 HRMDER 404
            +M  +
Sbjct: 772 MQMKTK 777



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 204/411 (49%), Gaps = 15/411 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----------GE 51
           +A  +F ++    C PN ITYS LI+GLC+ G    A  ++ ++I  +          G+
Sbjct: 540 QANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ V Y  +++GLCK   V  A +LL  M      P+ + Y++++ GFC   + 
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A+ +F+ M   G  P+V T++ ++D + K+G+++ A ++L  M++    PN   Y  +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C TG   +A  L   ME  GC  NV +Y+ LI+G  K  +++  L L+ +M +KG 
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  VTY  L         ++ A  L DEM++         YRT + G  K    + +L 
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR--FLASLG 837

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL---PRGVLIADVVTYNIMIH 348
           L   +           Y  LID   K+GRL+ A EL   +      + +A    +  +I 
Sbjct: 838 LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQ 897

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           ALC   ++++A  L+ +M  +G+ PD  AF  L+ G I  N+ ++ ++L +
Sbjct: 898 ALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCY 948



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 171/334 (51%), Gaps = 22/334 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++K  G  P+V TY+ LI+  C+ G    A + F+EM +        C P+ V
Sbjct: 470 KAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG------CSPNVV 523

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++    K   + +A ++  +M      P+ +TY+++I G C A +  +A  ++ ++
Sbjct: 524 TYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583

Query: 122 MDQG----------------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
           +                   + PNVVT+  +++ LCK  K+ +A  LL+ M+  G  PN 
Sbjct: 584 IGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQ 643

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            VY+ L+DGFC  G ++ A+E+F+ M   G   +V +Y+ LI+   K+  ++ A+ + S+
Sbjct: 644 IVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 703

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P VVTY  +  GL +  + E+A  L   M++ G + +   Y   IDGL K G 
Sbjct: 704 MLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGK 763

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +   LELF  ++   C  +  +Y  LI+  C +G
Sbjct: 764 VDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 193/413 (46%), Gaps = 28/413 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLC-- 71
           GC P+   +++L++  C       A  LF  M N  G     C P  V+Y   I  +C  
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM-NTCG-----CPPGYVVYNIFIGSICGR 389

Query: 72  ----KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D A+++  +M   +   + +   +  R  C      +A ++  EMM +G  
Sbjct: 390 EELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFV 449

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T++ ++  LC+  ++++A  L + M ++GV P+ + Y  L+D FC  G + +A+  
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M S GC  NV +Y+ L++ Y K+K++  A  ++  M+     P  +TY+ L  GL +
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569

Query: 248 IHQVERAFKL----------------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
             ++++A ++                F+      ++ +   Y   ++GLCK   + +A +
Sbjct: 570 AGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L   +    CE +   Y  L+DG CK G +  A E+F  + +   +  V TY  +I  + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            DG++D A  +   M      P+ V +  ++ G  +  ET K + LL  M+++
Sbjct: 690 KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 160/351 (45%), Gaps = 42/351 (11%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+TY  L+NGLC+      A +L + M+         C+P+ ++Y  ++DG CK G +
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG------CEPNQIVYDALVDGFCKVGEI 659

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A+E+ L+M      P V TY S+I         + A ++  +M+     PNVVT++ +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +D LCK G+ E+A  LL LM + G  PN   Y  L+DG    G+V+   ELF+ M++ GC
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 197 KHNVFSYSILINGYCK---------------------------------NKEIEGALSLY 223
             N  +Y ILIN  C                                  +K    +L L 
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLL 839

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA---ADTWAYRTFIDGL 280
            EM S    P    Y  L     +  ++E A +L  EM     +   A    + + I  L
Sbjct: 840 EEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQAL 899

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           C +  + EA+ L+  +R      D+ ++ CL+ GL +  +   A +L + +
Sbjct: 900 CLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 192/450 (42%), Gaps = 52/450 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN--------GEFG 53
           EA     +LK FG  P+ +TY+ L+  L   G   +A  + +EM            G F 
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 54  -VVCKP-----------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
             +CK                  D V+ T +I GL +    ++A   L +M+  +  P+V
Sbjct: 247 QALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNV 306

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VTY +++ GF         KR+   MM +G  P+   F+ ++   C       A +L   
Sbjct: 307 VTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNR 366

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGR--------VNRAKELFVSMESMGCKHNVFSYSILI 207
           M   G  P   VYN  +   C  GR        ++ A++++  M    C  N  + +   
Sbjct: 367 MNTCGCPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFA 424

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
              C   + E A  +  EM+ KG  P   TY  +   L +  +V++AF LF EM++ GV 
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D + Y   ID  CK G I +A   F  +R   C  ++ +Y+ L+    KS +L  A ++
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM----------------EAKGV 371
           FH +       + +TY+ +I  LC  G++ KA +++  +                +   +
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +P+ V +  L+ G  +  + S   +LL  M
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAM 634



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 136/287 (47%), Gaps = 28/287 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  + +++    C PNV+TY+ +++GLC+TG T  ALNL   M          C P+ V 
Sbjct: 697 AMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG------CSPNVVT 750

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +IDGL K G VD   EL +QMK K   P+ VTY  +I   C A   ++A  L  EM 
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMK 810

Query: 123 D-------QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
                   QG +  V  FS          +   +  LLE M      P A VY  L+D F
Sbjct: 811 QTHWPKYLQGYRTTVQGFS---------KRFLASLGLLEEMESHDTAPIAPVYGMLIDSF 861

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIK 232
              GR+  A EL   M  +    N+ S   ++ LI   C + ++E A++LYSEM  +GI 
Sbjct: 862 SKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIV 921

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           P +  +  L  GL E ++   A +L   + + GV    W    F DG
Sbjct: 922 PDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV---NWEGNKFCDG 965



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 161/405 (39%), Gaps = 75/405 (18%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C +G   +A E L ++KD    P  VTYN++++    A     A R+  EM   G   + 
Sbjct: 180 CLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDR 239

Query: 131 VTFSVIMDELCKNGKMEEASQLLE---------LMIQI---------------------- 159
            T       LCK G+  +A  LLE         L  Q+                      
Sbjct: 240 STVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299

Query: 160 -GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               PN   Y TL+ GF    ++   K +   M + GC  +   ++ L++ YC  ++   
Sbjct: 300 NSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAY 359

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIG---------------------------------- 244
           A  L++ M + G  P  V YN +FIG                                  
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYN-IFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKI 418

Query: 245 --------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
                   L  + + E+AF++  EM R G   D   Y   I  LC+   + +A  LF+ +
Sbjct: 419 NTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEM 478

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           + +    D+ +Y+ LID  CK+G ++ A   F  +       +VVTY  ++HA     ++
Sbjct: 479 KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQL 538

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +A+D+F  M      P+ + ++ L+ G  +  E  K  E+  ++
Sbjct: 539 YQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 3/173 (1%)

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +P+ VTYN L   L    QVE AF++  EM   G   D     +F   LCK G   +A
Sbjct: 199 GYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA 258

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           L+L         +LD    + +I GL ++     A    H +     I +VVTY  ++  
Sbjct: 259 LDLLEREDF---KLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTG 315

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
                ++     +   M  +G  P    FN+L+       + +   +L +RM+
Sbjct: 316 FLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMN 368



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + +  L  ++++    P    Y  LI+   + G    AL L +EM+  +    +  K   
Sbjct: 833 LASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD-- 890

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            ++T++I  LC    V++A  L  +M+ + I PD+  +  +++G    N  NEA +L   
Sbjct: 891 -MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYG 949

Query: 121 MMDQGV 126
           +  +GV
Sbjct: 950 ICQEGV 955


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 200/407 (49%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPD 59
           EA A+F  L   G +P +ITY+TL+  L R     +I AL L +   NG        KPD
Sbjct: 40  EAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPAL-LSKVADNG-------MKPD 91

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +++   +I+   + G VD+A ++  +MK+    P   TYN++I+GF  A    E+ +L +
Sbjct: 92  SILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKL-L 150

Query: 120 EMM--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           EMM  D+ V+PN  T+++++   C   K+EEA  +L  M+  G++P+   YNT+   +  
Sbjct: 151 EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQ 210

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G   RA+ L + M     K N  +  I+I+GYCK   +  AL     M   G+ P  V 
Sbjct: 211 NGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVV 270

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N+L  G  +        +    M+  G+  D   + T ++     G +    E+F  + 
Sbjct: 271 FNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMV 330

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E DI +YS L  G  ++G+ + A  L  S+ +  +  +VV +  +I   CA GKMD
Sbjct: 331 KAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMD 390

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  L   M   G +P+   + TL+ G     +  K  ELL  M+ER
Sbjct: 391 RAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEER 437



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 5/362 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+K +GC+P   TY+TLI G    G    ++ L E M  G  E     KP+  
Sbjct: 110 EAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMM--GQDEN---VKPNDR 164

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I   C +  +++A  +L +M    I PDVVTYN++ R +    ++  A+RL ++M
Sbjct: 165 TYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKM 224

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+PN  T  +I+   CK G M EA + L  M ++GV PN  V+N+L+ G+  T   
Sbjct: 225 PYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDT 284

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   E    ME  G K +V ++S ++N +     +E    ++++M+  GI+P +  Y+ L
Sbjct: 285 NGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSIL 344

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     Q  +A  L   M ++GV  +   + T I G C  G +  A  L   +  +  
Sbjct: 345 AKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGT 404

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++++Y  LI G  ++ +   A EL  ++    ++ ++ T  ++  A  A G   +A+ 
Sbjct: 405 SPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANR 464

Query: 362 LF 363
           + 
Sbjct: 465 IL 466



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 170/341 (49%), Gaps = 1/341 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           T +++ L  +G   +A+ +   + ++   P ++TY +++              L  ++ D
Sbjct: 26  TKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 85

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G++P+ +  + +++   ++GK++EA ++ + M + G +P    YNTL+ GF + GR   
Sbjct: 86  NGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYE 145

Query: 184 AKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           + +L   M +    K N  +Y+ILI  +C  K++E A ++  +M++ GI+P VVTYNT+ 
Sbjct: 146 SMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMA 205

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +  + ERA +L  +M  + V  +       I G CK G + EAL     ++ L  +
Sbjct: 206 RAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVD 265

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   ++ LI G   +       E    +    +  DVVT++ +++A  + G M+   ++
Sbjct: 266 PNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEI 325

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F DM   G+ PD  A++ L  G +R  +  K   LL  M +
Sbjct: 326 FNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSK 366


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 221/429 (51%), Gaps = 29/429 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           +A  ++T++   G  PNV+TYS LINGLCR G  + A  +F                   
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 43  ------EEMINGNGEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 E + +G G +G++ +    PD V+ + +I+GL ++G +D+A     Q   + + 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +   +N++I G      + +  +++I M    V P+VVT++V++  L + G+++EA  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              +++ G  P+  +Y TL+DGFC         ++F  M+S G   ++  Y++LIN + +
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E  L L  E++  G++P +VTYNT+  G   +    +A KLF+ ++      +   
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   ID  CK+G + +A+ +F ++     E +I +YSCLIDG  K+   + A+EL+  + 
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  ++V+Y+I+I  LC  G M++A   F     + + PD +A+  L+ G  +    +
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLA 782

Query: 393 KVVELLHRM 401
           + + L   M
Sbjct: 783 EAMMLYDHM 791



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+  F  +   G  PN++T+STLIN  C+      A +L+  MI    E G+V  PD VI
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVI 312

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +I+GL + G +++   L      + +  DVV ++S++  +    D  +A  ++  M+
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNVVT+S++++ LC+NG++ EA  +   +++ G+ P+   Y++L+DGFC +  + 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L+  M   G   +V   S+LING  +   ++ AL  + + + +G+      +N L 
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F + +     K++  M  + V  D   Y   + GL + G + EAL LF  L      
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   Y  LIDG CK        ++F  +    +  D+  YN++I+    +G ++   +L
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
             ++   G+ PD V +NT++ G       SK ++L 
Sbjct: 613 LREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF 648



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P ++  + ++ GLC      VA + F+ M+           P+ V ++T+I+  CKE
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPS------PNLVTFSTLINVYCKE 288

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D+A  L   M +K I PD+V Y+ +I G   A    E   LF   + +GV+ +VV F
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S IMD   + G + +A ++   M++ G+ PN   Y+ L++G C  GRV  A  +F  +  
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + +V +YS LI+G+CK++ +     LY  ML KG  P VV  + L  GL     ++ 
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A + F +  + G+  + + +   IDG  +     + L+++  + + K   D+ +Y+ L+ 
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL + GRL  A  LF  L +     D + Y  +I   C          +F  M++ G+ P
Sbjct: 529 GLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFP 588

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   +N L+    R      V+ELL  +
Sbjct: 589 DICIYNVLINMFFREGCVENVLELLREI 616



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 205/439 (46%), Gaps = 49/439 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----CK 57
           EA +L+  +   G  P+++ YS LINGL R G         EE   GN  F +      K
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK-------LEE---GNSLFSMALARGVK 342

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
            D VI+++I+D   + G + KA E+  +M  + I+P+VVTY+ +I G C      EA  +
Sbjct: 343 MDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGV 402

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++ QG++P+V+T+S ++D  CK+  + +   L  +M++ G  P+  V + L++G   
Sbjct: 403 FGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSR 462

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G ++ A   F      G   N + ++ LI+G  + K     L +Y  M    + P VVT
Sbjct: 463 QGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVT 522

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-------------- 283
           Y  L  GL E  +++ A  LF ++ + G + D   Y T IDG CK               
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582

Query: 284 ---------------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
                                G +   LEL R +     E DI +Y+ +I G C      
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A +LF  L  G    + +T+ I+I A C DG+MD A  +F  M  +G  P+ + ++ L+
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  +   T    EL  +M
Sbjct: 703 DGYFKTENTESAFELYEKM 721



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 186/383 (48%), Gaps = 12/383 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
             + +G  P+ + YS L++  CR G    A++ F  M     + GV     A   + ++D
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWM----SKMGVSISHYAA--SEMLD 183

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L     +D   E   +M        +  Y  V   F    +  +       ++++G+ P
Sbjct: 184 LLIDSDRIDVILENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVP 238

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            +V  + I+  LC   ++  AS   ++M++ G  PN   ++TL++ +C   R++ A  L+
Sbjct: 239 KIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY 298

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   ++  YSILING  +  ++E   SL+S  L++G+K  VV ++++      +
Sbjct: 299 NLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRV 358

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             + +A +++  M + G++ +   Y   I+GLC+NG ++EA  +F  +     E  + +Y
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S LIDG CKS  L+  + L+  + R   + DVV  +++I+ L   G MD+A   F     
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 369 KGVAPDCVAFNTLMLGCIRNNET 391
           +G+  +   FN L+ GC R   T
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRT 501



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 182/416 (43%), Gaps = 26/416 (6%)

Query: 8   TKLKAFGCEPNVITYSTLINGLCRTGHTIV-------ALNLFEEMIN--GN--------G 50
           + L+ F    N +     +   C   H ++       A  +F+ M+   GN        G
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
            F       + +Y+ ++   C+ G VD+A +    M    ++   +++ +         D
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVS---ISHYAASEMLDLLID 187

Query: 111 SNEAKRLF--IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           S+    +    E M +G+      +  + +   K G++E+       +++ G+ P     
Sbjct: 188 SDRIDVILENYEEMCKGLG----VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDC 243

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++ G C+  ++  A + F  M   G   N+ ++S LIN YCK   ++ A SLY+ M+ 
Sbjct: 244 NKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIE 303

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KGI P +V Y+ L  GLF   ++E    LF      GV  D   + + +D   + G + +
Sbjct: 304 KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGK 363

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A+E++  +       ++ +YS LI+GLC++GR+  A  +F  + +  L   V+TY+ +I 
Sbjct: 364 AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             C    +     L+  M  KG  PD V  + L+ G  R     + +    +  +R
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKR 479



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  LK    +PN IT++ LI+  C+ G    A+ +F  M+    E      P+ +
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE------PNIL 696

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K    + A EL  +M    ++P++V+Y+ +I G C      EA   F   
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA 756

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-GF 175
           + + + P+V+ + +++   CK G++ EA  L + M+  G+ P+  +   L + GF
Sbjct: 757 IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGF 811


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 210/401 (52%), Gaps = 10/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           +   L T +   G  P++++Y TLIN L ++G+ + A+ LF+EM + G         PD 
Sbjct: 167 KGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG-------VNPDV 219

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y  +IDG  ++G   KA E+  ++  + ++ P V TYN +I G C     +E+  ++ 
Sbjct: 220 MCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWN 279

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M      P++ TFS ++  L K G    A ++ + MI+ G+ P+   YN ++ G   TG
Sbjct: 280 RMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTG 339

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N+  EL+  M    C  N+ SY++LI G   NK++E A+  +  +  +G+K    TY 
Sbjct: 340 KLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYG 398

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL +   + +A ++ +E +  G   DT+AY + + GLCK G + +A+EL   ++  
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +L+   ++ LI+G  ++ +L+ A  +   +        VV+YN +I+ LC   +   A
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA 518

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           +    +M  +G+ PD + ++ L+ G  R  +    + L H+
Sbjct: 519 YLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQ 559



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 39/437 (8%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF ++   G  P+V+ Y+ LI+G  R G  + A  +++ ++  +  +     P  
Sbjct: 201 LDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY-----PSV 255

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I+GLCK G +D++ E+  +MK    +PD+ T++S+I G   A + N A+++F E
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 121 MMDQGVQP----------------------------------NVVTFSVIMDELCKNGKM 146
           M++ G+ P                                  N+V++++++  L  N K+
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKV 375

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           E+A    +L+ + G++ ++  Y  L++G C  G +N+A  +    E+ G   + F+YS +
Sbjct: 376 EQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSM 435

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +E A+ L  +M     K     +N+L  G     ++E A  +  EM+    
Sbjct: 436 VHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDC 495

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
           A    +Y T I+GLCK     +A    + +     + D+ +YS LIDGLC+  ++ +A  
Sbjct: 496 APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALN 555

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L+H      L  D+  +NI+IH LC   K+D A ++F  M      PD V  NT+M G  
Sbjct: 556 LWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLY 615

Query: 387 RNNETSKVVELLHRMDE 403
           +  +  + +++  R+ E
Sbjct: 616 KAGDCVEALKIWDRILE 632



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 212/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  ++ ++K     P++ T+S++I+GL + G+   A  +F+EMI    E G+   PD  
Sbjct: 273 ESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMI----ESGL--SPDVR 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ GL + G ++K  EL   M  KN   ++V+YN +I+G        +A   +  +
Sbjct: 327 TYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLL 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +  T+ ++++ LCKNG + +A ++LE     G   + F Y++++ G C  G +
Sbjct: 386 HERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGML 445

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL   M+    K N   ++ LINGY +  ++E A+S+  EM SK   PTVV+YNT+
Sbjct: 446 EQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTI 505

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A+    EM   G+  D   Y   IDGLC+   +  AL L+      + 
Sbjct: 506 INGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRL 565

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D++ ++ +I GLC + ++ +A E+F  + +   + D+VT+N ++  L   G   +A  
Sbjct: 566 KPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALK 625

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++  +   G+ PD +++N    G       S  +E L+   +R
Sbjct: 626 IWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR 668



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 212/438 (48%), Gaps = 42/438 (9%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A  LF  +   FGC P + ++++++N    +     A  LF       G       P+ 
Sbjct: 96  QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA-ELFFTYFQTAG-----MSPNL 149

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I   CK+   +K K LL  M +  +NPD+++Y ++I     + +  +A  LF E
Sbjct: 150 QTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDE 209

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE-LMIQIGVRPNAFVYNTLMDGFCLTG 179
           M  +GV P+V+ +++++D   + G   +A+++ + L+ +  V P+   YN +++G C  G
Sbjct: 210 MSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLG 269

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           +++ + E++  M+      ++F++S +I+G  K      A  ++ EM+  G+ P V TYN
Sbjct: 270 KLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYN 329

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRH----------------------------------G 265
            +  GLF   ++ + F+L++ M ++                                  G
Sbjct: 330 AMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERG 389

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           + AD+  Y   I+GLCKNGY+ +AL +         +LD  +YS ++ GLCK G L+ A 
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAV 449

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           EL H + +     +   +N +I+      K+++A  +  +M++K  AP  V++NT++ G 
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL 509

Query: 386 IRNNETSKVVELLHRMDE 403
            +    S     L  M E
Sbjct: 510 CKAERFSDAYLSLKEMLE 527



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 186/388 (47%), Gaps = 44/388 (11%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNE 113
            C  D  +  + I    K    D+A  L   M D    NP + ++NS++  F  +N   E
Sbjct: 75  TCSEDVAL--SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWRE 132

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+  F      G+ PN+ T+++++   CK  + E+   LL  M + G+ P+   Y TL++
Sbjct: 133 AELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLIN 192

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIK 232
               +G +  A ELF  M   G   +V  Y+ILI+G+ +  +   A  ++  +L++  + 
Sbjct: 193 ALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY 252

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P+V TYN +  GL ++ +++ + ++++ M+++  + D + + + I GL K G    A ++
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLK------------------------------ 322
           F+ +       D+R+Y+ ++ GL ++G+L                               
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDN 372

Query: 323 -------IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
                    W+L H   RG L AD  TY ++I+ LC +G ++KA  +  + E +G   D 
Sbjct: 373 KKVEQAICYWQLLHE--RG-LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDE 403
            A+++++ G  +     + VEL+H+M +
Sbjct: 430 FAYSSMVHGLCKKGMLEQAVELIHQMKK 457



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 43/307 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   +  L   G + +  TY  LINGLC+ G+   AL + EE  N   +       D  
Sbjct: 377 QAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL------DTF 430

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMK---------------------------------- 87
            Y++++ GLCK+G +++A EL+ QMK                                  
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM 490

Query: 88  -DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             K+  P VV+YN++I G C A   ++A     EM+++G++P+++T+S+++D LC+  K+
Sbjct: 491 KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKV 550

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A  L    I   ++P+  ++N ++ G C   +V+ A E+F  M  + C  ++ +++ +
Sbjct: 551 DMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTI 610

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK-LFDEMQRHG 265
           + G  K  +   AL ++  +L  G++P +++YN  F GL    +V  A + L+D + R  
Sbjct: 611 MEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGI 670

Query: 266 VA-ADTW 271
           +  A TW
Sbjct: 671 LPNAPTW 677



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 6/215 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  ++K+  C P V++Y+T+INGLC+      A    +EM+    E G+  KPD +
Sbjct: 482 EAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML----EEGL--KPDMI 535

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDGLC+   VD A  L  Q  +K + PD+  +N +I G C A   + A  +F +M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P++VT + IM+ L K G   EA ++ + +++ G++P+   YN    G C   RV
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           + A E        G   N  ++++L+     +K +
Sbjct: 656 SDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 288 EALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
           +AL LF+ +  I  C   IRS++ +++   +S + + A   F       +  ++ TYNI+
Sbjct: 96  QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNIL 155

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           I   C   + +K   L   M   G+ PD +++ TL+    ++      VEL   M  R
Sbjct: 156 IKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 203/389 (52%), Gaps = 13/389 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRT---GHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           L  ++ A G + NV+TY+  I G  +    G     L L E+        GV C  + V 
Sbjct: 247 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE-------GVAC--NVVT 297

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I G    G +++A+ L  +M++K I  DV  Y S+I   C + +   A  LF EM 
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+  T+  ++  +CK G+ME A  L+  M   G+  N  ++NTL+DG+C +G V+
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L V ME  G + +VF+Y+ + +G CK    + A  L   M+ +G+ P  +++ TL 
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 477

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +      A ++F EM+  G   +   Y   IDG  K G + EA +L   L      
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + LI G C  G++ +A +LF  +P+  L+ +VVTY  MI  L  DG+ ++A  L
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           + +M+  G+ PD   +++L +G + + E+
Sbjct: 598 YDEMKETGLTPDDTVYSSL-VGSLHSAES 625



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 205/398 (51%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++     E  V + + +++GLC+ G   +   L +E+       GV  K + V Y  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEV----AAKGV--KANVVTYNA 265

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            I+G  K   +    E+L  M+ + +  +VVTY  +I GF       EA+RLF EM ++G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  ++ I+   C++G ++ A  L + M   G+ P+A  Y  L+ G C  G++  A+
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+  G   N   ++ LI+GYC++  ++ AL L   M  KG++  V  YN++  GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +FR +       +I
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LIDG  K G +K A +L   L    LI DV T   +IH  C DGK+D A  LF +
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M  +G+ P+ V +  ++ G  ++  + +  +L   M E
Sbjct: 566 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 603



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 6/278 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   G  P+  TY  LI+G+C+ G    A  L  EM    G+ G+   P  VI
Sbjct: 349 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM---QGK-GIDLNP--VI 402

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+IDG C+ G VD+A  L + M+ K +  DV  YNS+  G C  N  +EAK L   M+
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV PN ++F+ ++D  CK G   EA ++   M + G  PN   YN L+DG+   G + 
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +E+ G   +V++ + LI+G C + +++ AL L+ EM  +G+ P VVTY  + 
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            GL +  + E AFKL+DEM+  G+  D   Y + +  L
Sbjct: 583 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 175/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G E +V  Y+++I+  CR+G+   AL LF+EM +     G++  P A 
Sbjct: 313 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PSAH 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G+CK G ++ A+ L+ +M+ K I+ + V +N++I G+C +   +EA RL + M
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +V  ++ I   LCK  + +EA  LL  M++ GV PN   + TL+D +C  G  
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F  ME  G   N+ +Y++LI+GY K   ++ A  L  E+ ++G+ P V T  +L
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +V+ A KLFDEM + G+  +   Y   I GL K+G   EA +L+  ++    
Sbjct: 547 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606

Query: 302 ELDIRSYSCLIDGL 315
             D   YS L+  L
Sbjct: 607 TPDDTVYSSLVGSL 620



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 168/336 (50%)

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L + G VD       +M + ++   V +   V+ G C   D    ++L  E+  +GV+ 
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++  ++   K   +   +++L LM + GV  N   Y  L+ GF   G++  A+ LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G + +V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EAL L   +     E D+ +Y
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +  GLCK  R   A  L  S+    +  + +++  +I   C +G   +A  +F +ME 
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           KG  P+ + +N L+ G  +     +  +L   ++ R
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 59/306 (19%)

Query: 138 DELCKNGKMEEASQLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK----------- 185
           D+L K+ K  E   L     +  G+R    V  +L+D  C   + NRAK           
Sbjct: 104 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 163

Query: 186 ------------ELFVSMESMG-----------------------------------CKH 198
                       E F  ME  G                                    + 
Sbjct: 164 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 223

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            V+S +I+++G CK  ++E    L  E+ +KG+K  VVTYN    G F+   +    ++ 
Sbjct: 224 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL 283

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M++ GVA +   Y   I G    G I EA  LF  +R    E D+  Y+ +I   C+S
Sbjct: 284 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 343

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G +K A  LF  +    LI    TY  +IH +C  G+M+ A  L  +M+ KG+  + V F
Sbjct: 344 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 403

Query: 379 NTLMLG 384
           NTL+ G
Sbjct: 404 NTLIDG 409



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F +++  G  PN+ITY+ LI+G  + G+   A  L +E+ N     G++  PD 
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR----GLI--PDV 540

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              T++I G C +G VD A +L  +M  + + P+VVTY ++I G      S EA +L+ E
Sbjct: 541 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 600

Query: 121 MMDQGVQPNVVTFSVIMDEL 140
           M + G+ P+   +S ++  L
Sbjct: 601 MKETGLTPDDTVYSSLVGSL 620


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 212/467 (45%), Gaps = 74/467 (15%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A F  L A G  P+   ++  +      G    AL +   M    G       PDA  Y 
Sbjct: 144 AAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEG----APPPDAFSYN 199

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I GL + G    A ++  +M D+ + P+ +TYN++I G     D     RL  +M+  
Sbjct: 200 VVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQD 259

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD----------- 173
           G +PNVVT++V++  LC+ G+M+E   L++ M    + P+ F Y+ L D           
Sbjct: 260 GRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTM 319

Query: 174 ------------------------GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
                                   G C  G+V +A+++   +   G       Y+ LING
Sbjct: 320 LSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLING 379

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-------------------- 249
           YC+ ++++GA S++ +M S+ I+P  +TYN L  GL ++                     
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPS 439

Query: 250 ---------------QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
                          Q+E+ F +  +MQ  G+ ++  ++ + +   CKNG I EA+ +  
Sbjct: 440 VETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILD 499

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       + + Y+ +ID   +SG  + A+ L   +    + A + TYN+++  LC + 
Sbjct: 500 DMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNS 559

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           ++D+A +L  ++  +G+ PD V++NT++  C    +T + +ELL  M
Sbjct: 560 QIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 204/403 (50%), Gaps = 12/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  AL  ++ ++   P+  TYS L +GL RTG +   L+LF E +    + GV+    A 
Sbjct: 283 ETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL----KKGVIIG--AY 336

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             + +++GLCK+G V KA+++L  +    + P    YN++I G+C   D   A  +F +M
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +T++ +++ LCK   + EA  L+  M + GV P+   +NTL+D +   G++
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +   M+  G K NV S+  ++  +CKN +I  A+++  +M+ K + P    YN++
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                E    E+AF L ++M+  GV+A  + Y   + GLCKN  I EA EL   L     
Sbjct: 517 IDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ SY+ +I   C  G    A EL   + +  +   + TY+ ++ AL + G++     
Sbjct: 577 RPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L+  M  K V P    + T      R    SKV  L   M E+
Sbjct: 637 LYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMSEK 673



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 4/281 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P++ + +++++ L   G+  +      L++  G RP+ F +N  +      G ++ A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 188 FVSM-ESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
              M  S G    + FSY+++I G  ++ +   AL ++ EM+ +G+ P  +TYNT+  G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +E  F+L D+M + G   +   Y   + GLC+ G + E   L   +       D 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 306 RSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
            +YS L DGL ++G  +    LF  SL +GV+I    T +I+++ LC DGK+ KA  +  
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIG-AYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +   G+ P    +NTL+ G  +  +      +  +M  R+
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++A G +PNV +Y+  I  L +      A  +  +M N        CKPD + +T 
Sbjct: 342 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTV 395

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC  G +  AK++  +MK  +  PD VTY +++  F    DS     ++  M   G
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              NVV ++ ++D LC+ G++ EA ++ + M Q G+ P  + YN+L+ GF    R   A 
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M+  G K N +++ + IN Y K+ E   A+  Y  M SKGI P VV  N +  GL
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  A ++F E++  GV+ DT  Y   I    K     EA+++F  +    C  D+
Sbjct: 576 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 635

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + LID L K+GR   AW +F+ L    L     TYN ++  L  +GK+ +   L  +
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 695

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M      P+ + +NT++    +N   +  +++L+ M
Sbjct: 696 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 731



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ L+  L ++G    AL ++  M+      GVV  P    
Sbjct: 269 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRT 322

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K   V+    LL +M+   + P+V +Y   IR    A   +EA R+  +M 
Sbjct: 323 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+V+T +V++  LC  G++ +A  +   M +   +P+   Y TL+D F   G   
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 442

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ +M++ G   NV +Y+ +I+  C+   +  AL ++ EM  KGI P   +YN+L 
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +   A +LF  M  HG   + + +  FI+   K+G  ++A++ +  ++     
Sbjct: 503 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 562

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL KSGRL +A  +FH L    +  D +TY +MI       K D+A  +
Sbjct: 563 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 622

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F DM      PD +A N+L+    +     +   + +++ E N
Sbjct: 623 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 665



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 13/390 (3%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L  K K+FG       Y++LI GL       +A  LF EM     E G  C PD 
Sbjct: 862  LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM----KELG--CGPDE 915

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  ++D + K   +++  ++  +M  K      VTYN++I G   +    +A  L+  
Sbjct: 916  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M QG  P   T+  ++D L K G++E+A  L   M++ G + N  +YN L++G  + G 
Sbjct: 976  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 1035

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +   LF  M   G   ++ SY+I+I+  CK  ++   L+ + ++L  G++P ++TYN 
Sbjct: 1036 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1095

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL +  ++E A  LF+EMQ+ G+  + + Y + I  L K G   EA +++  L    
Sbjct: 1096 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1155

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK-- 358
             + ++ +Y+ LI G   SG    A+  +  +  G  + +  T +    +  A G + K  
Sbjct: 1156 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQI 1215

Query: 359  -AHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
             +H  + + +     P   A+  L  GC+R
Sbjct: 1216 TSHRSYHNAK----EPTTKAWRWLSKGCLR 1241



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 204/421 (48%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K++  GC+P+VIT++ LI  LC  G    A ++F +M   +       KPD V
Sbjct: 373 EAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ------KPDRV 426

Query: 62  IY-----------------------------------TTIIDGLCKEGFVDKAKELLLQM 86
            Y                                   T +ID LC+ G V +A E+  +M
Sbjct: 427 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 486

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K K I P+  +YNS+I GF  A+   +A  LF  M   G +PN  T  + ++   K+G+ 
Sbjct: 487 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 546

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A Q  ELM   G+ P+    N ++ G   +GR+  AK +F  +++MG   +  +Y+++
Sbjct: 547 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 606

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I    K  + + A+ ++ +M+     P V+  N+L   L++  + + A+++F +++   +
Sbjct: 607 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 666

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y T + GL + G + E + L   +       ++ +Y+ ++D LCK+G +  A +
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 726

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           + +S+     I D+ +YN +I+ L  + + ++A  +F  M+ K + PD     T++   +
Sbjct: 727 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 785

Query: 387 R 387
           +
Sbjct: 786 K 786



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 171/336 (50%)

Query: 66   IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            +I  LCK+    +A EL+ + K   ++     YNS+I G    N  + A+ LF EM + G
Sbjct: 851  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910

Query: 126  VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              P+  T+++++D + K+ ++EE  ++ E M + G       YNT++ G   + R+ +A 
Sbjct: 911  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970

Query: 186  ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +L+ ++ S G      +Y  L++G  K   IE A +L++EML  G K     YN L  G 
Sbjct: 971  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030

Query: 246  FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                  E+   LF +M   G+  D  +Y   ID LCK G + + L  FR L  +  E D+
Sbjct: 1031 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1090

Query: 306  RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             +Y+ LIDGL KS RL+ A  LF+ + +  ++ ++ TYN +I  L   GK  +A  ++ +
Sbjct: 1091 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1150

Query: 366  MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +  KG  P+   +N L+ G   +  T        RM
Sbjct: 1151 LLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1186



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 199/438 (45%), Gaps = 78/438 (17%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            PN+ITY+T+++ LC+ G    AL++   M          C PD   Y T+I GL KE   
Sbjct: 703  PNLITYNTILDCLCKNGAVNDALDMLYSMTTKG------CIPDLSSYNTVIYGLVKEERY 756

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA----KRLFIE------------ 120
            ++A  +  QMK K + PD  T  +++  F       EA    K  F++            
Sbjct: 757  NEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHS 815

Query: 121  -----MMDQGVQPNV------VTFSVIMDE---------LCKNGKMEEASQLLELMIQIG 160
                 +   G++ ++       +  + +D+         LCK  K  EA +L++     G
Sbjct: 816  LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 875

Query: 161  VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            V     +YN+L+ G      ++ A+ LF  M+ +GC  + F+Y++L++   K+  IE  L
Sbjct: 876  VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 935

Query: 221  SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             +  EM  KG + T VTYNT+  GL +  ++E+A  L+  +   G +     Y   +DGL
Sbjct: 936  KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 995

Query: 281  CKNGYIVEALELFRTLRILKCEL-----------------------------------DI 305
             K G I +A  LF  +    C+                                    DI
Sbjct: 996  LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 1055

Query: 306  RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +SY+ +ID LCK+G+L      F  L    L  D++TYN++I  L    ++++A  LF +
Sbjct: 1056 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115

Query: 366  MEAKGVAPDCVAFNTLML 383
            M+ KG+ P+   +N+L+L
Sbjct: 1116 MQKKGIVPNLYTYNSLIL 1133



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 181/421 (42%), Gaps = 46/421 (10%)

Query: 31  RTGHTIVALNLFEEMINGNGEFG-----------VVCKPDAVIYTTIIDGLCKEGFVDKA 79
           R   T  + N   E++ G+G  G            + K +   +  I  GL  EG +  A
Sbjct: 210 RVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 269

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              L  MK+  I  +  TYN ++     +    EA  ++  MM  GV P+V T+SV+M  
Sbjct: 270 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 329

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             K   +E    LL  M   GV+PN + Y   +       R + A  +   ME+ GCK +
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 389

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI   C    I  A  ++ +M     KP  VTY TL     +    +   ++++
Sbjct: 390 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 449

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M+  G   +  AY   ID LC+ G + EALE+F  ++      +  SY+ LI G  K+ 
Sbjct: 450 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 509

Query: 320 RLKIAWELFHSL------PRGV-----------------------------LIADVVTYN 344
           R   A ELF  +      P G                              ++ DVV  N
Sbjct: 510 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 569

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++  L   G++  A  +F +++A GV+PD + +  ++  C + ++  + V++ + M E 
Sbjct: 570 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 629

Query: 405 N 405
           N
Sbjct: 630 N 630



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 11/404 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL ++G   +A  +F E+       GV   PD 
Sbjct: 547 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL----KAMGV--SPDT 600

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++   M + N  PDV+  NS+I     A   +EA R+F +
Sbjct: 601 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 660

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E   LLE M      PN   YNT++D  C  G 
Sbjct: 661 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 720

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A ++  SM + GC  ++ SY+ +I G  K +    A S++ +M  K + P   T  T
Sbjct: 721 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCT 779

Query: 241 LFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +     +I  ++ A  +  D   + G   D  +  + ++G+ K   I +++E    +   
Sbjct: 780 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 839

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD      LI  LCK  +   A EL        +      YN +I  L  +  +D A
Sbjct: 840 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 899

Query: 360 HDLFLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVELLHR 400
             LF +M+  G  PD   +N L   M   +R  E  KV E +HR
Sbjct: 900 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 943



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 163/350 (46%), Gaps = 6/350 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLL 84
            LI  LC+    + A     E++     FGV  K    +Y ++I GL  E  +D A+ L  
Sbjct: 851  LIKHLCKQKKALEA----HELVKKFKSFGVSLKTG--LYNSLICGLVDENLIDIAEGLFA 904

Query: 85   QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            +MK+    PD  TYN ++     +    E  ++  EM  +G +   VT++ I+  L K+ 
Sbjct: 905  EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 964

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            ++E+A  L   ++  G  P    Y  L+DG    GR+  A+ LF  M   GCK N   Y+
Sbjct: 965  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            IL+NG+      E    L+ +M+ +GI P + +Y  +   L +  Q+      F ++   
Sbjct: 1025 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1084

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
            G+  D   Y   IDGL K+  + EA+ LF  ++      ++ +Y+ LI  L K+G+   A
Sbjct: 1085 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1144

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             +++  L       +V TYN +I      G  D A+  +  M   G  P+
Sbjct: 1145 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 213/404 (52%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  ++ +++     P+V T + ++N  C+ G    A+    EM     E       +AV
Sbjct: 49  SAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFEL------NAV 102

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++DG    G ++ AK +L  M +K +  + VT   +I+G+C      EA+++  EM
Sbjct: 103 SYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREM 162

Query: 122 -MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + GV  +   +  ++D  CK GKM +A ++ + M+++G++ N FV N+L++G+C  G+
Sbjct: 163 EKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQ 222

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+  + L + M  +  K + +SY  L++GYC++     A ++  +ML KGI+PTVVTYNT
Sbjct: 223 VHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNT 282

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL      + A +L+  M + GV  +   Y T +DGL K G    AL L+  +    
Sbjct: 283 LLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARG 342

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               I +++ +I+GLCK G +  A E F  +       D +TY  +    C  G +++A 
Sbjct: 343 INKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +   ME + + P    +N+L++G   + + SK+++LL  MD R
Sbjct: 403 KIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTR 446



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 206/445 (46%), Gaps = 61/445 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L+  + A G   ++  ++T+INGLC+ G    A   F+ M     E G  CKPD +
Sbjct: 330 RALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM----EELG--CKPDGI 383

Query: 62  IYTTIIDGLCKEGFVDKA-----------------------------------KELLLQM 86
            Y T+ DG CK G V++A                                    +LL +M
Sbjct: 384 TYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEM 443

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             + ++P+VVTY ++I G+C     ++A   + EM+ +G  PNV+  S I+  L + G++
Sbjct: 444 DTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRI 503

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR----------AKELFVSMESMGC 196
           +EA+ LL+ M+          ++ ++D  CL    N           A  L  S      
Sbjct: 504 DEANMLLQKMVD---------FDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSL 554

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
            +NV  Y+I + G CK+ ++  A   +  +      P   TY TL  G      V  AF 
Sbjct: 555 PNNVV-YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L DEM   G+  +   Y   ++GLCK+GY+  A  LF  L +     ++ +Y+ LIDG C
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC 673

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           KSG  + A +L   + +  +   ++TY+ +I+  C    +++A  L  +M+A  V     
Sbjct: 674 KSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIA 733

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            F+ L+ GCI++ +  K+ +L + M
Sbjct: 734 TFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 206/499 (41%), Gaps = 123/499 (24%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC------KPDAVIYTTII 67
           G + N+   ++LING C+ G                GE  ++C      KPD+  Y T++
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQV------------HEGERLLMCMRKLDLKPDSYSYCTLV 249

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           DG C++G   KA  +  QM  K I P VVTYN++++G C   D  +A RL+  M+ +GV 
Sbjct: 250 DGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVT 309

Query: 128 PN-----------------------------------VVTFSVIMDELCKNGKMEEASQL 152
           PN                                   +  F+ +++ LCK G+M+ A + 
Sbjct: 310 PNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKET 369

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA---------------------------- 184
            + M ++G +P+   Y TL DG+C  G V  A                            
Sbjct: 370 FKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFT 429

Query: 185 -------KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
                   +L   M++ G   NV +Y  LI G+C    ++ A S Y EM+ KG  P V+ 
Sbjct: 430 SKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVII 489

Query: 238 YNTLFIGLFEIHQVERAFKLFDEM---------------QRHGVAA-DTW---------- 271
            + +   L+ + +++ A  L  +M               Q   +   D W          
Sbjct: 490 CSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESA 549

Query: 272 ---------AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
                     Y   + GLCK+G + +A   F  L       D  +Y  LI G   +G + 
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A+ L   +    L+ ++ TYN +++ LC  G +D+A  LF  +  KG+ P+ V +N L+
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  ++    + ++L  +M
Sbjct: 670 DGYCKSGSPREALDLRGKM 688



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 205/462 (44%), Gaps = 76/462 (16%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP V+TY+TL+ GLCR G    AL L+  M+    + GV   P+ V Y T++DGL K 
Sbjct: 272 GIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML----QRGVT--PNEVGYCTLLDGLFKM 325

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  L   +  + IN  +  +N++I G C   + + AK  F  M + G +P+ +T+
Sbjct: 326 GDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385

Query: 134 SVIMDELCKNGKMEEA--------------------------------SQLLELMIQI-- 159
             + D  CK G +EEA                                S+L++L+ ++  
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445

Query: 160 -GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN   Y  L+ G+C  GR+++A   +  M   G   NV   S +++   +   I+ 
Sbjct: 446 RGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDE 505

Query: 219 ALSLYSEMLS--------------------------------KGIK---PTVVTYNTLFI 243
           A  L  +M+                                   IK   P  V YN    
Sbjct: 506 ANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMA 565

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           GL +  +V  A + F  +       D + Y T I G    GY+ EA  L   +       
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +I +Y+ L++GLCKSG L  A  LF  L    LI +VVTYNI+I   C  G   +A DL 
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             M  +G++P  + +++L+ G  + ++  + ++LL+ M   N
Sbjct: 686 GKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASN 727



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 207/436 (47%), Gaps = 42/436 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A     +++  G E N ++Y++L++G    G    A  + + M     E GV+   + V
Sbjct: 84  RAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM----SEKGVM--RNKV 137

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             T +I G CK+  V++A+++L +M K+  +  D   Y ++I G+C      +A R+  E
Sbjct: 138 TLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDE 197

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++ N+   + +++  CKNG++ E  +LL  M ++ ++P+++ Y TL+DG+C  G 
Sbjct: 198 MLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGL 257

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            ++A  +   M   G +  V +Y+ L+ G C+  + + AL L+  ML +G+ P  V Y T
Sbjct: 258 SSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCT 317

Query: 241 LFIGLFEIHQVERAFKLFDE-----------------------------------MQRHG 265
           L  GLF++    RA  L+D+                                   M+  G
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELG 377

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              D   YRT  DG CK G + EA ++   +   +    I  Y+ LI GL  S ++    
Sbjct: 378 CKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLI 437

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           +L   +    L  +VVTY  +I   C  G++DKA   + +M  KG AP+ +  + ++   
Sbjct: 438 DLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSL 497

Query: 386 IRNNETSKVVELLHRM 401
            R     +   LL +M
Sbjct: 498 YRLGRIDEANMLLQKM 513



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 161/327 (49%), Gaps = 1/327 (0%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           ++G V  A  +   M      P + + NS++       +S  A  ++ +M    + P+V 
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T +++++  CK GK+E A + +  M ++G   NA  YN+L+DG+   G +  AK +   M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQ 250
              G   N  + ++LI GYCK  ++E A  +  EM  + G+      Y  L  G  ++ +
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGK 187

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +  A ++ DEM + G+  + +   + I+G CKNG + E   L   +R L  + D  SY  
Sbjct: 188 MGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCT 247

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L+DG C+ G    A+ +   + R  +   VVTYN ++  LC  G    A  L+  M  +G
Sbjct: 248 LVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRG 307

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVEL 397
           V P+ V + TL+ G  +  + S+ + L
Sbjct: 308 VTPNEVGYCTLLDGLFKMGDFSRALTL 334



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 165/345 (47%), Gaps = 14/345 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   G  PNV+TY  LI G C  G    A + + EMI      G    P+ +I + 
Sbjct: 439 LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI------GKGFAPNVIICSK 492

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+  L + G +D+A  LL +M    ++ D+V  +  +  F  A+          + +D+ 
Sbjct: 493 IVSSLYRLGRIDEANMLLQKM----VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDES 548

Query: 126 V----QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PN V +++ M  LCK+GK+ +A +    +      P+ F Y TL+ GF   G V
Sbjct: 549 AIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYV 608

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  L   M + G   N+ +Y+ L+NG CK+  ++ A  L+ ++  KG+ P VVTYN L
Sbjct: 609 NEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNIL 668

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +      A  L  +M + G++     Y + I+G CK   + EA++L   ++    
Sbjct: 669 IDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
           +  I ++S L++G  + G +K   +L + +      A + ++  M
Sbjct: 729 DQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQM 773



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  L      P+  TY TLI+G    G+   A NL +EM+N     G+V  P+  
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNK----GLV--PNIT 628

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++GLCK G++D+A+ L  ++  K + P+VVTYN +I G+C +    EA  L  +M
Sbjct: 629 TYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM 688

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+++T+S +++  CK   +EEA +LL  M    V      ++ L++G    G V
Sbjct: 689 LKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDV 748

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE-GALSLYSEML 227
            +  +L          HN+   +    G   +K++E   LS   EML
Sbjct: 749 KKMSKL----------HNMMHMACPSAGITSHKQMELSELSNAKEML 785



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 40/308 (12%)

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +I+    + G ++ A  + + M + G +P+    N+L+      G    A  ++  M  +
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL---FIGLFEIH-- 249
               +VF+ +I++N YCK  ++E A+    EM   G +   V+YN+L   ++ L +I   
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 250 ------------------------------QVERAFKLFDEMQRH-GVAADTWAYRTFID 278
                                         +VE A K+  EM++  GV  D +AY   ID
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSC--LIDGLCKSGRLKIAWELFHSLPRGVL 336
           G CK G + +A+ +   +  LK  L +  + C  LI+G CK+G++     L   + +  L
Sbjct: 181 GYCKVGKMGDAIRVRDEM--LKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
             D  +Y  ++   C DG   KA ++   M  KG+ P  V +NTL+ G  R  +    + 
Sbjct: 239 KPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALR 298

Query: 397 LLHRMDER 404
           L H M +R
Sbjct: 299 LWHLMLQR 306



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 74/159 (46%)

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           E   V+ A  +FD M ++G      +  + +  L K G    A+ ++  +R L    D+ 
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           + + +++  CK+G+++ A E    + +     + V+YN ++    + G ++ A  +   M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             KGV  + V    L+ G  +  +  +  ++L  M++ +
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKED 166


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 221/429 (51%), Gaps = 29/429 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF------------------- 42
           +A  ++T++   G  PNV+TYS LINGLCR G  + A  +F                   
Sbjct: 363 KAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLI 422

Query: 43  ------EEMINGNGEFGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                 E + +G G +G++ +    PD V+ + +I+GL ++G +D+A     Q   + + 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
            +   +N++I G      + +  +++I M    V P+VVT++V++  L + G+++EA  L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              +++ G  P+  +Y TL+DGFC         ++F  M+S G   ++  Y++LIN + +
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E  L L  E++  G++P +VTYNT+  G   +    +A KLF+ ++      +   
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   ID  CK+G + +A+ +F ++     E +I +YSCLIDG  K+   + A+EL+  + 
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  ++V+Y+I+I  LC  G M++A   F     + + PD +A+  L+ G  +    +
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLA 782

Query: 393 KVVELLHRM 401
           + + L   M
Sbjct: 783 EAMMLYDHM 791



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+  F  +   G  PN++T+STLIN  C+      A +L+  MI    E G+V  PD VI
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVI 312

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +I+GL + G +++   L      + +  DVV ++S++  +    D  +A  ++  M+
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNVVT+S++++ LC+NG++ EA  +   +++ G+ P+   Y++L+DGFC +  + 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L+  M   G   +V   S+LING  +   ++ AL  + + + +G+      +N L 
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G F + +     K++  M  + V  D   Y   + GL + G + EAL LF  L      
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   Y  LIDG CK        ++F  +    +  D+  YN++I+    +G ++   +L
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
             ++   G+ PD V +NT++ G       SK ++L 
Sbjct: 613 LREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF 648



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P ++  + ++ GLC      VA + F+ M+           P+ V ++T+I+  CKE
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPS------PNLVTFSTLINVYCKE 288

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             +D+A  L   M +K I PD+V Y+ +I G   A    E   LF   + +GV+ +VV F
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S IMD   + G + +A ++   M++ G+ PN   Y+ L++G C  GRV  A  +F  +  
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + +V +YS LI+G+CK++ +     LY  ML KG  P VV  + L  GL     ++ 
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A + F +  + G+  + + +   IDG  +     + L+++  + + K   D+ +Y+ L+ 
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL + GRL  A  LF  L +     D + Y  +I   C          +F  M++ G+ P
Sbjct: 529 GLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFP 588

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D   +N L+    R      V+ELL  +
Sbjct: 589 DICIYNVLINMFFREGCVENVLELLREI 616



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 204/435 (46%), Gaps = 41/435 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L+  +   G  P+++ YS LINGL R G      +LF  M    G      K D V
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFS-MALARG-----VKMDVV 346

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+++I+D   + G + KA E+  +M  + I+P+VVTY+ +I G C      EA  +F ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG++P+V+T+S ++D  CK+  + +   L  +M++ G  P+  V + L++G    G +
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F      G   N + ++ LI+G  + K     L +Y  M    + P VVTY  L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN------------------ 283
             GL E  +++ A  LF ++ + G + D   Y T IDG CK                   
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586

Query: 284 -----------------GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                            G +   LEL R +     E DI +Y+ +I G C       A +
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           LF  L  G    + +T+ I+I A C DG+MD A  +F  M  +G  P+ + ++ L+ G  
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 387 RNNETSKVVELLHRM 401
           +   T    EL  +M
Sbjct: 707 KTENTESAFELYEKM 721



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 186/383 (48%), Gaps = 12/383 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
             + +G  P+ + YS L++  CR G    A++ F  M     + GV     A   + ++D
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWM----SKMGVSISHYAA--SEMLD 183

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L     +D   E   +M        +  Y  V   F    +  +       ++++G+ P
Sbjct: 184 LLIDSDRIDVILENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVP 238

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            +V  + I+  LC   ++  AS   ++M++ G  PN   ++TL++ +C   R++ A  L+
Sbjct: 239 KIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY 298

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G   ++  YSILING  +  ++E   SL+S  L++G+K  VV ++++      +
Sbjct: 299 NLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRV 358

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             + +A +++  M + G++ +   Y   I+GLC+NG ++EA  +F  +     E  + +Y
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S LIDG CKS  L+  + L+  + R   + DVV  +++I+ L   G MD+A   F     
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 369 KGVAPDCVAFNTLMLGCIRNNET 391
           +G+  +   FN L+ GC R   T
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRT 501



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 182/416 (43%), Gaps = 26/416 (6%)

Query: 8   TKLKAFGCEPNVITYSTLINGLCRTGHTIV-------ALNLFEEMIN--GN--------G 50
           + L+ F    N +     +   C   H ++       A  +F+ M+   GN        G
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 51  EFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
            F       + +Y+ ++   C+ G VD+A +    M    ++   +++ +         D
Sbjct: 131 SFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVS---ISHYAASEMLDLLID 187

Query: 111 SNEAKRLF--IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
           S+    +    E M +G+      +  + +   K G++E+       +++ G+ P     
Sbjct: 188 SDRIDVILENYEEMCKGLG----VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDC 243

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++ G C+  ++  A + F  M   G   N+ ++S LIN YCK   ++ A SLY+ M+ 
Sbjct: 244 NKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIE 303

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KGI P +V Y+ L  GLF   ++E    LF      GV  D   + + +D   + G + +
Sbjct: 304 KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGK 363

Query: 289 ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIH 348
           A+E++  +       ++ +YS LI+GLC++GR+  A  +F  + +  L   V+TY+ +I 
Sbjct: 364 AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             C    +     L+  M  KG  PD V  + L+ G  R     + +    +  +R
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKR 479



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 7/175 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  LK    +PN IT++ LI+  C+ G    A+ +F  M+    E      P+ +
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE------PNIL 696

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDG  K    + A EL  +M    ++P++V+Y+ +I G C      EA   F   
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA 756

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD-GF 175
           + + + P+V+ + +++   CK G++ EA  L + M+  G+ P+  +   L + GF
Sbjct: 757 IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGF 811


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 208/408 (50%), Gaps = 16/408 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK----- 57
           A  LF  +   GC+PNV+TY+ LI+G C+ G    A  ++  M  G+ E   + K     
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLD 607

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P+ + Y  ++DGLCK   V +A ELL  M      P+ + Y++VI GFC     
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            +A+ +F +M ++G  PN+ T+S  +D L K+ +++   ++L  M++    PN  +Y  +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A +L + ME  GC  NV +Y+ +I+G+ K+ +IE  L L+ +M SKG 
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  +TY  L         ++ A+KL DEM++        ++R  I+G  +    + ++ 
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIG 845

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV--LIADVVTYNIMIHA 349
           L   L   +       Y  LID   K+GRL++A +L   +       +++   Y  +I  
Sbjct: 846 LLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIEN 905

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           L    K+DKA +L+  M +K V P+      L+ G I+ ++  + ++L
Sbjct: 906 LSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 216/452 (47%), Gaps = 51/452 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLC----RTGHTIVAL--NLFEEMIN--------- 47
           A  LF K+   GC+P  + Y+  I  +C    +    I+ L    + EM++         
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427

Query: 48  ---------GNGEFG----VVCK-------PDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
                    G G+F     ++C+       PD   Y+ +I  LC    V+KA  L  +MK
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMK 487

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              I P V TY  +I  FC A    +A++ F EM+ +G  PNVVT++ ++    K  +M 
Sbjct: 488 RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMP 547

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM---------------E 192
            A +L E+M+  G +PN   Y  L+DG C  G++ +A +++  M               +
Sbjct: 548 VADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLD 607

Query: 193 SMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              C+  NV +Y  L++G CK   ++ A  L   ML+ G +P  + Y+ +  G  +I ++
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A ++F +M   G + + + Y +FID L K+  +   L++   +    C  ++  Y+ +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           +DGLCK G+   A++L   +       +VVTY  MI      GK+++  +LF DM +KG 
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           AP+ + +  L+  C  N    +  +LL  M +
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 186/365 (50%), Gaps = 22/365 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++K  G  P+V TY+ LI+  C+ G    A   F+EM++        C P+ V
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG------CTPNVV 531

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I    K   +  A EL   M  +   P+VVTY ++I G C A    +A +++  M
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591

Query: 122 --------MDQGVQ--------PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
                   MD+  +        PNV+T+  ++D LCK  +++EA +LL+ M+  G  PN 
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQ 651

Query: 166 FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            VY+ ++DGFC  G++  A+E+F  M   G   N+++YS  I+   K+  ++  L + S+
Sbjct: 652 IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSK 711

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P VV Y  +  GL +I + + A+KL  +M+  G   +   Y   IDG  K+G 
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           I + LELFR +    C  +  +Y  LI+  C +G L  A++L   + +      ++++  
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831

Query: 346 MIHAL 350
           +I   
Sbjct: 832 IIEGF 836



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 205/445 (46%), Gaps = 63/445 (14%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK- 72
           GC PN   +++LI+  C++     A  LF++MI         C+P  ++Y   I  +C  
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLVYNIFIGSVCSN 397

Query: 73  -----EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   +D  ++   +M D  +  + V  ++  R  C A   ++A ++  EMM +G  
Sbjct: 398 EEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L E M + G+ P+ + Y  L+D FC  G + +A++ 
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K K++  A  L+  ML +G KP VVTY  L  G  +
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 248 IHQVERAFKLFDEMQRHGVAAD----------------TWAYRTFIDGLCKNGYIVEALE 291
             Q+E+A +++  M+    ++D                   Y   +DGLCK   + EA E
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGV--------------- 335
           L  T+    CE +   Y  +IDG CK G+L+ A E+F  +  RG                
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 336 -------------------LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
                                 +VV Y  M+  LC  GK D+A+ L L ME KG  P+ V
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVV 757

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +  ++ G  ++ +  + +EL   M
Sbjct: 758 TYTAMIDGFGKSGKIEQCLELFRDM 782



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 205/488 (42%), Gaps = 100/488 (20%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK FG +P+  TY+ LI    R      A  +  EM++    +  V   D    +    
Sbjct: 201 RLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS----YAFVM--DRYTLSCFAY 254

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G   +A +L+ + +D    PD V YN ++ G C A+   EA  +   M      P
Sbjct: 255 SLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT+ +++    + G++    ++L +MI  G  PN  ++N+L+  +C +   + A +LF
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE--------------------------------- 215
             M   GC+     Y+I I   C N+E                                 
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432

Query: 216 --------IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                    + A  +  EM+ KG  P   TY+ +   L +  +VE+AF LF+EM+R+G+ 
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492

Query: 268 ADTWAYRTFIDGLCKNGYIVEAL-----------------------------------EL 292
              + Y   ID  CK G I +A                                    EL
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD------------- 339
           F  + +  C+ ++ +Y+ LIDG CK+G+++ A +++  +   +  +D             
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE 612

Query: 340 ---VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
              V+TY  ++  LC   ++ +AH+L   M A G  P+ + ++ ++ G  +  +     E
Sbjct: 613 GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQE 672

Query: 397 LLHRMDER 404
           +  +M ER
Sbjct: 673 VFTKMSER 680



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 16/335 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   + A GCEPN I Y  +I+G C+ G    A  +F +M     E G    P+  
Sbjct: 634 EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM----SERGY--SPNLY 687

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y++ ID L K+  +D   ++L +M + +  P+VV Y  ++ G C    ++EA +L ++M
Sbjct: 688 TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PNVVT++ ++D   K+GK+E+  +L   M   G  PN   Y  L++  C  G +
Sbjct: 748 EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L   M+      ++ S+  +I G+  ++E   ++ L  E+      P    Y  L
Sbjct: 808 DEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRIL 865

Query: 242 FIGLFEIHQVERAFKLFDEMQ---RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-- 296
                +  ++E A  L +E+     H V ++ + Y + I+ L     + +ALEL+ ++  
Sbjct: 866 IDNYIKAGRLEVALDLLEEISSSPSHAV-SNKYLYASLIENLSHASKVDKALELYASMIS 924

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           + +  EL I  +  LI GL K  + + A +L  S+
Sbjct: 925 KNVVPELSILVH--LIKGLIKVDKWQEALQLSDSI 957



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 159/406 (39%), Gaps = 76/406 (18%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C+ G+ + A E L ++KD    P   TYN++I+ F  A+  + A  +  EM+      + 
Sbjct: 187 CRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDR 246

Query: 131 VTFSVIMDELCKNGK---------------------------------MEEASQLLELMI 157
            T S     LCK GK                                  EEA  +L  M 
Sbjct: 247 YTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMR 306

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                PN   Y  L+ G    G++ R K +   M + GC  N   ++ LI+ YCK+++  
Sbjct: 307 SSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYS 366

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIG--------------------------------- 244
            A  L+ +M+  G +P  + YN +FIG                                 
Sbjct: 367 YAYKLFKKMIKCGCQPGYLVYN-IFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNK 425

Query: 245 ---------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
                    L    + ++AFK+  EM   G   D   Y   I  LC    + +A  LF  
Sbjct: 426 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 485

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++       + +Y+ LID  CK+G ++ A + F  +       +VVTY  +IHA     +
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQ 545

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  A +LF  M  +G  P+ V +  L+ G  +  +  K  ++  RM
Sbjct: 546 MPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 4/246 (1%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS--YSILINGYCKNKE 215
           QIG      V++ L+D        +    L   ME     H +     + L+   C+N  
Sbjct: 132 QIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGW 191

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL     +   G KP+  TYN L        +++ A+ +  EM  +    D +    
Sbjct: 192 WNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSC 251

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
           F   LCK G   EA +L           D   Y+ ++ GLC++   + A ++ H +    
Sbjct: 252 FAYSLCKGGKCREAFDLIDEAEDFV--PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSS 309

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            I +VVTY I++      G++ +   +   M  +G  P+   FN+L+    ++ + S   
Sbjct: 310 CIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAY 369

Query: 396 ELLHRM 401
           +L  +M
Sbjct: 370 KLFKKM 375


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 201/399 (50%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++A G +PNV +Y+  I  L +      A  +  +M N        CKPD + +T 
Sbjct: 217 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTV 270

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC  G +  AK++  +MK  +  PD VTY +++  F    DS     ++  M   G
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              NVV ++ ++D LC+ G++ EA ++ + M Q G+ P  + YN+L+ GF    R   A 
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M+  G K N +++ + IN Y K+ E   A+  Y  M SKGI P VV  N +  GL
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  A ++F E++  GV+ DT  Y   I    K     EA+++F  +    C  D+
Sbjct: 451 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 510

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + LID L K+GR   AW +F+ L    L     TYN ++  L  +GK+ +   L  +
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           M      P+ + +NT++    +N   +  +++L+ M  +
Sbjct: 571 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTK 609



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ L+  L ++G    AL ++  M+      GVV  P    
Sbjct: 144 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRT 197

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K   V+    LL +M+   + P+V +Y   IR    A   +EA R+  +M 
Sbjct: 198 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 257

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+V+T +V++  LC  G++ +A  +   M +   +P+   Y TL+D F   G   
Sbjct: 258 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 317

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ +M++ G   NV +Y+ +I+  C+   +  AL ++ EM  KGI P   +YN+L 
Sbjct: 318 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 377

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +   A +LF  M  HG   + + +  FI+   K+G  ++A++ +  ++     
Sbjct: 378 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 437

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL KSGRL +A  +FH L    +  D +TY +MI       K D+A  +
Sbjct: 438 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 497

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F DM      PD +A N+L+    +     +   + +++ E N
Sbjct: 498 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 540



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 172/343 (50%), Gaps = 6/343 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L  K K+FG       Y++LI GL       +A  LF EM     E G  C PD 
Sbjct: 737  LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM----KELG--CGPDE 790

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  ++D + K   +++  ++  +M  K      VTYN++I G   +    +A  L+  
Sbjct: 791  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M QG  P   T+  ++D L K G++E+A  L   M++ G + N  +YN L++G  + G 
Sbjct: 851  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +   LF  M   G   ++ SY+I+I+  CK  ++   L+ + ++L  G++P ++TYN 
Sbjct: 911  TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL +  ++E A  LF+EMQ+ G+  + + Y + I  L K G   EA +++  L    
Sbjct: 971  LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + ++ +Y+ LI G   SG    A+  +  +  G  + +  TY
Sbjct: 1031 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 204/421 (48%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K++  GC+P+VIT++ LI  LC  G    A ++F +M   +       KPD V
Sbjct: 248 EAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ------KPDRV 301

Query: 62  IY-----------------------------------TTIIDGLCKEGFVDKAKELLLQM 86
            Y                                   T +ID LC+ G V +A E+  +M
Sbjct: 302 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 361

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K K I P+  +YNS+I GF  A+   +A  LF  M   G +PN  T  + ++   K+G+ 
Sbjct: 362 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 421

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A Q  ELM   G+ P+    N ++ G   +GR+  AK +F  +++MG   +  +Y+++
Sbjct: 422 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 481

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I    K  + + A+ ++ +M+     P V+  N+L   L++  + + A+++F +++   +
Sbjct: 482 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 541

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y T + GL + G + E + L   +       ++ +Y+ ++D LCK+G +  A +
Sbjct: 542 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 601

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           + +S+     I D+ +YN +I+ L  + + ++A  +F  M+ K + PD     T++   +
Sbjct: 602 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 660

Query: 387 R 387
           +
Sbjct: 661 K 661



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 171/336 (50%)

Query: 66   IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            +I  LCK+    +A EL+ + K   ++     YNS+I G    N  + A+ LF EM + G
Sbjct: 726  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785

Query: 126  VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              P+  T+++++D + K+ ++EE  ++ E M + G       YNT++ G   + R+ +A 
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845

Query: 186  ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            +L+ ++ S G      +Y  L++G  K   IE A +L++EML  G K     YN L  G 
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905

Query: 246  FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                  E+   LF +M   G+  D  +Y   ID LCK G + + L  FR L  +  E D+
Sbjct: 906  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 965

Query: 306  RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             +Y+ LIDGL KS RL+ A  LF+ + +  ++ ++ TYN +I  L   GK  +A  ++ +
Sbjct: 966  ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1025

Query: 366  MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +  KG  P+   +N L+ G   +  T        RM
Sbjct: 1026 LLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRM 1061



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 199/438 (45%), Gaps = 78/438 (17%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            PN+ITY+T+++ LC+ G    AL++   M          C PD   Y T+I GL KE   
Sbjct: 578  PNLITYNTILDCLCKNGAVNDALDMLYSMTTKG------CIPDLSSYNTVIYGLVKEERY 631

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA----KRLFIE------------ 120
            ++A  +  QMK K + PD  T  +++  F       EA    K  F++            
Sbjct: 632  NEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHS 690

Query: 121  -----MMDQGVQPNV------VTFSVIMDE---------LCKNGKMEEASQLLELMIQIG 160
                 +   G++ ++       +  + +D+         LCK  K  EA +L++     G
Sbjct: 691  LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750

Query: 161  VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            V     +YN+L+ G      ++ A+ LF  M+ +GC  + F+Y++L++   K+  IE  L
Sbjct: 751  VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 810

Query: 221  SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             +  EM  KG + T VTYNT+  GL +  ++E+A  L+  +   G +     Y   +DGL
Sbjct: 811  KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 870

Query: 281  CKNGYIVEALELFRTLRILKCEL-----------------------------------DI 305
             K G I +A  LF  +    C+                                    DI
Sbjct: 871  LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 930

Query: 306  RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +SY+ +ID LCK+G+L      F  L    L  D++TYN++I  L    ++++A  LF +
Sbjct: 931  KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 990

Query: 366  MEAKGVAPDCVAFNTLML 383
            M+ KG+ P+   +N+L+L
Sbjct: 991  MQKKGIVPNLYTYNSLIL 1008



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 11/404 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL ++G   +A  +F E+       GV   PD 
Sbjct: 422 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL----KAMGV--SPDT 475

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++   M + N  PDV+  NS+I     A   +EA R+F +
Sbjct: 476 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 535

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E   LLE M      PN   YNT++D  C  G 
Sbjct: 536 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 595

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A ++  SM + GC  ++ SY+ +I G  K +    A S++ +M  K + P   T  T
Sbjct: 596 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCT 654

Query: 241 LFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +     +I  ++ A  +  D   + G   D  +  + ++G+ K   I +++E    +   
Sbjct: 655 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 714

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD      LI  LCK  +   A EL        +      YN +I  L  +  +D A
Sbjct: 715 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 774

Query: 360 HDLFLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVELLHR 400
             LF +M+  G  PD   +N L   M   +R  E  KV E +HR
Sbjct: 775 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 818



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 6/240 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  L+  L + G  P   TY  L++GL + G    A NLF EM+    E+G  CK +  
Sbjct: 843  QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML----EYG--CKANCT 896

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            IY  +++G    G  +K   L   M D+ INPD+ +Y  +I   C A   N+    F ++
Sbjct: 897  IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 956

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ G++P+++T+++++D L K+ ++EEA  L   M + G+ PN + YN+L+      G+ 
Sbjct: 957  LEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1016

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +++  + + G K NVF+Y+ LI GY  +   + A + Y  M+  G  P   TY  L
Sbjct: 1017 AEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 3/302 (0%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           ++RG     D  E   +F  M  Q V+ NV TF+ I   L   G +  A   L +M + G
Sbjct: 99  LMRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 155

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  NA+ YN L+     +G    A E++  M   G   +V +YS+L+  + K +++E  L
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM + G+KP V +Y      L +  + + A+++  +M+  G   D   +   I  L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C  G I +A ++F  ++    + D  +Y  L+D    +G  +   E+++++       +V
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V Y  +I ALC  G++ +A ++F +M+ KG+ P+  ++N+L+ G ++ +     +EL   
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 401 MD 402
           MD
Sbjct: 396 MD 397



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  LF ++  +GC+ N   Y+ L+NG    G+T    +LF++M++          PD  
Sbjct: 878  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG------INPDIK 931

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT IID LCK G ++       Q+ +  + PD++TYN +I G   +    EA  LF EM
Sbjct: 932  SYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 991

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G+ PN+ T++ ++  L K GK  EA ++ E ++  G +PN F YN L+ G+ ++G  
Sbjct: 992  QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGST 1051

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
            + A   +  M   GC  N  +Y  L N
Sbjct: 1052 DSAYAAYGRMIVGGCLPNSSTYMQLPN 1078



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 24/344 (6%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R  HT  + N   E++ G+G  G +                         E+   M+ + 
Sbjct: 85  RVAHTTASCNYMLELMRGHGRVGDMA------------------------EVFDVMQRQI 120

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +  +V T+ ++  G         A      M + G+  N  T++ ++  L K+G   EA 
Sbjct: 121 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 180

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++  +M+  GV P+   Y+ LM  F     V     L   ME+ G K NV+SY+I I   
Sbjct: 181 EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 240

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            + K  + A  + ++M ++G KP V+T+  L   L +  ++  A  +F +M++     D 
Sbjct: 241 GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 300

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T +D    NG     +E++  ++      ++ +Y+ +ID LC+ GR+  A E+F  
Sbjct: 301 VTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 360

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           + +  ++ +  +YN +I       +   A +LF  M+  G  P+
Sbjct: 361 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 6/134 (4%)

Query: 7    FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
            F +L   G EP++ITY+ LI+GL ++     A++LF EM     + G+V  P+   Y ++
Sbjct: 953  FRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM----QKKGIV--PNLYTYNSL 1006

Query: 67   IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
            I  L K G   +A ++  ++  K   P+V TYN++IRG+  +  ++ A   +  M+  G 
Sbjct: 1007 ILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1066

Query: 127  QPNVVTFSVIMDEL 140
             PN  T+  + ++L
Sbjct: 1067 LPNSSTYMQLPNQL 1080



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A + F    R    A T A   ++  L + +G + +  E+F  ++    + ++ +++ + 
Sbjct: 73  ALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 132

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            GL   G L+ A      +    ++ +  TYN +++ L   G   +A +++  M   GV 
Sbjct: 133 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVV 192

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           P    ++ LM+   +  +   V+ LL  M+
Sbjct: 193 PSVRTYSVLMVAFGKRRDVETVLWLLREME 222


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++A G +PNV +Y+  I  L +      A  +  +M N        CKPD + +T 
Sbjct: 252 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTV 305

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC  G +  AK++  +MK  +  PD VTY +++  F    DS     ++  M   G
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              NVV ++ ++D LC+ G++ EA ++ + M Q G+ P  + YN+L+ GF    R   A 
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M+  G K N +++ + IN Y K+ E   A+  Y  M SKGI P VV  N +  GL
Sbjct: 426 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 485

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  A ++F E++  GV+ DT  Y   I    K     EA+++F  +    C  D+
Sbjct: 486 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 545

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            + + LID L K+GR   AW +F+ L    L     TYN ++  L  +GK+ +   L  +
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M      P+ + +NT++    +N   +  +++L+ M
Sbjct: 606 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 641



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ L+  L ++G    AL ++  M+      GVV  P    
Sbjct: 179 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRT 232

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K   V+    LL +M+   + P+V +Y   IR    A   +EA R+  +M 
Sbjct: 233 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 292

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+V+T +V++  LC  G++ +A  +   M +   +P+   Y TL+D F   G   
Sbjct: 293 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 352

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ +M++ G   NV +Y+ +I+  C+   +  AL ++ EM  KGI P   +YN+L 
Sbjct: 353 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 412

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +   A +LF  M  HG   + + +  FI+   K+G  ++A++ +  ++     
Sbjct: 413 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 472

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL KSGRL +A  +FH L    +  D +TY +MI       K D+A  +
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F DM      PD +A N+L+    +     +   + +++ E N
Sbjct: 533 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 575



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 204/421 (48%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  K++  GC+P+VIT++ LI  LC  G    A ++F +M   +       KPD V
Sbjct: 283 EAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ------KPDRV 336

Query: 62  IY-----------------------------------TTIIDGLCKEGFVDKAKELLLQM 86
            Y                                   T +ID LC+ G V +A E+  +M
Sbjct: 337 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 396

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K K I P+  +YNS+I GF  A+   +A  LF  M   G +PN  T  + ++   K+G+ 
Sbjct: 397 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 456

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
            +A Q  ELM   G+ P+    N ++ G   +GR+  AK +F  +++MG   +  +Y+++
Sbjct: 457 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 516

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I    K  + + A+ ++ +M+     P V+  N+L   L++  + + A+++F +++   +
Sbjct: 517 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 576

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                 Y T + GL + G + E + L   +       ++ +Y+ ++D LCK+G +  A +
Sbjct: 577 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 636

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           + +S+     I D+ +YN +I+ L  + + ++A  +F  M+ K + PD     T++   +
Sbjct: 637 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 695

Query: 387 R 387
           +
Sbjct: 696 K 696



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 191/401 (47%), Gaps = 8/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +LK    EP   TY+TL+ GL R G     ++L EEM + N        P+ +
Sbjct: 563 EAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN------YPPNLI 616

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y TI+D LCK G V+ A ++L  M  K   PD+ +YN+VI G       NEA  +F +M
Sbjct: 617 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 676

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + + P+  T   I+    K G M+EA  ++ +  +Q G + +    ++LM+G      
Sbjct: 677 -KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG 735

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + ++ E    + S G   + F    LI   CK K+   A  L  +  S G+      YN+
Sbjct: 736 IEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 795

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL + + ++ A  LF EM+  G   D + Y   +D + K+  I E L++   +    
Sbjct: 796 LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 855

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            E    +Y+ +I GL KS RL+ A +L+++L          TY  ++  L   G+++ A 
Sbjct: 856 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 915

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +LF +M   G   +C  +N L+ G      T KV  L   M
Sbjct: 916 NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 956



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 187/400 (46%), Gaps = 8/400 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +LKA G  P+ ITY+ +I    +      A+ +F +MI  N      C PD + 
Sbjct: 494 AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN------CVPDVLA 547

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             ++ID L K G  D+A  +  Q+K+ N+ P   TYN+++ G        E   L  EM 
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 607

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN++T++ I+D LCKNG + +A  +L  M   G  P+   YNT++ G     R N
Sbjct: 608 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYN 667

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE-MLSKGIKPTVVTYNTL 241
            A  +F  M+ +    +  +   ++  + K   ++ AL +  +  L  G K    + ++L
Sbjct: 668 EAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSL 726

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G+ +   +E++ +  + +   G+  D +     I  LCK    +EA EL +  +    
Sbjct: 727 MEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGV 786

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            L    Y+ LI GL     + IA  LF  +       D  TYN+++ A+    ++++   
Sbjct: 787 SLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLK 846

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  +M  KG     V +NT++ G +++    + ++L + +
Sbjct: 847 VQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL 886



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 11/404 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL ++G   +A  +F E+       GV   PD 
Sbjct: 457 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL----KAMGV--SPDT 510

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++   M + N  PDV+  NS+I     A   +EA R+F +
Sbjct: 511 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 570

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E   LLE M      PN   YNT++D  C  G 
Sbjct: 571 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 630

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           VN A ++  SM + GC  ++ SY+ +I G  K +    A S++ +M  K + P   T  T
Sbjct: 631 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCT 689

Query: 241 LFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +     +I  ++ A  +  D   + G   D  +  + ++G+ K   I +++E    +   
Sbjct: 690 ILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASS 749

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD      LI  LCK  +   A EL        +      YN +I  L  +  +D A
Sbjct: 750 GITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIA 809

Query: 360 HDLFLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVELLHR 400
             LF +M+  G  PD   +N L   M   +R  E  KV E +HR
Sbjct: 810 EGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 853



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 151/302 (50%), Gaps = 3/302 (0%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           ++RG     D  E   +F  M  Q V+ NV TF+ I   L   G +  A   L +M + G
Sbjct: 134 LMRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  NA+ YN L+     +G    A E++  M   G   +V +YS+L+  + K +++E  L
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM + G+KP V +Y      L +  + + A+++  +M+  G   D   +   I  L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C  G I +A ++F  ++    + D  +Y  L+D    +G  +   E+++++       +V
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           V Y  +I ALC  G++ +A ++F +M+ KG+ P+  ++N+L+ G ++ +     +EL   
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 401 MD 402
           MD
Sbjct: 431 MD 432



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 24/344 (6%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
           R  HT  + N   E++ G+G  G                       D A E+   M+ + 
Sbjct: 120 RVAHTTASCNYMLELMRGHGRVG-----------------------DMA-EVFDVMQRQI 155

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +  +V T+ ++  G         A      M + G+  N  T++ ++  L K+G   EA 
Sbjct: 156 VKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREAL 215

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
           ++  +M+  GV P+   Y+ LM  F     V     L   ME+ G K NV+SY+I I   
Sbjct: 216 EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVL 275

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            + K  + A  + ++M ++G KP V+T+  L   L +  ++  A  +F +M++     D 
Sbjct: 276 GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDR 335

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T +D    NG     +E++  ++      ++ +Y+ +ID LC+ GR+  A E+F  
Sbjct: 336 VTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE 395

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           + +  ++ +  +YN +I       +   A +LF  M+  G  P+
Sbjct: 396 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 6/208 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L  K K+FG       Y++LI GL       +A  LF EM     E G  C PD 
Sbjct: 772 LEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM----KELG--CGPDE 825

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  ++D + K   +++  ++  +M  K      VTYN++I G   +    +A  L+  
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +M QG  P   T+  ++D L K G++E+A  L   M++ G + N  +YN L++G  + G 
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 945

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILIN 208
             +   LF  M   G   ++ SY+I+I+
Sbjct: 946 TEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 6/312 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F ++K     P+  T  T++    + G    AL++ ++     G      K D  
Sbjct: 668 EAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS-----KTDRS 721

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              ++++G+ K+  ++K+ E    +    I  D      +I+  C    + EA  L  + 
Sbjct: 722 SCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKF 781

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV      ++ ++  L     ++ A  L   M ++G  P+ F YN L+D    + R+
Sbjct: 782 KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRI 841

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               ++   M   G +    +Y+ +I+G  K++ +E A+ LY  ++S+G  PT  TY  L
Sbjct: 842 EEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPL 901

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++E A  LF+EM  +G  A+   Y   ++G    G   +   LF+ +     
Sbjct: 902 LDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 961

Query: 302 ELDIRSYSCLID 313
             DI+SY+ +ID
Sbjct: 962 NPDIKSYTIIID 973



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILKCELDIRSYSCLI 312
           A + F    R    A T A   ++  L + +G + +  E+F  ++    + ++ +++ + 
Sbjct: 108 ALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIF 167

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            GL   G L+ A      +    ++ +  TYN +++ L   G   +A +++  M   GV 
Sbjct: 168 GGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVV 227

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           P    ++ LM+   +  +   V+ LL  M+
Sbjct: 228 PSVRTYSVLMVAFGKRRDVETVLWLLREME 257


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 200/391 (51%), Gaps = 21/391 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L   G  P+V +Y+ L+NGLC    +  AL L   M +  G+    C PD V
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVV 89

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G  KEG +DK       M D+ I+P+VVTYNS+I   C A   ++A  +   M
Sbjct: 90  SYSTVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+ +T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR 
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++F SM   G K ++ +Y  L+ GY     +     L   M+  GI P    ++ L
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +VE A  +F +M++ G+  +   Y T ID LCK+G + +A+  F  +     
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             D   Y+ LI  LC   + + A ELF   L RG+ ++  + +N +I + C +G++ ++ 
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS-TIFFNSIIDSHCKEGRVIESG 381

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
            LF  M   GV PD +          RN+E 
Sbjct: 382 KLFDLMVRIGVKPDIITLG-------RNDEA 405



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 180/369 (48%), Gaps = 20/369 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+++ G EP+V+TY++L++ LC+ G    A  +F+ M           KPD  
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ ++  +       EA  +F +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN VT+  ++D LCK+G++E+A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 182 NRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +A+ELF+ M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KP ++T   
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--- 398

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
                  + + + A  LF     +G+  + W YR   + +   G + E  +LF ++    
Sbjct: 399 -------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C +D    + ++  L + G +  A      +       +  T ++ I  L + GK  + H
Sbjct: 452 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYH 510

Query: 361 DLFLDMEAK 369
            +FL  + K
Sbjct: 511 -IFLPEKYK 518


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 198/380 (52%), Gaps = 12/380 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRT---GHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           L  ++ A G + NV+TY+  I G  +    G     L L E+        GV C  + V 
Sbjct: 251 LMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE-------GVAC--NVVT 301

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I G    G +++A+ L  +M++K I  DV  Y S+I   C + +   A  LF EM 
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+  T+  ++  +CK G+ME A  L+  M   G+  N  ++NTL+DG+C +G V+
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L V ME  G + +VF+Y+ + +G CK    + A  L   M+ +G+ P  +++ TL 
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 481

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +      A ++F EM+  G   +   Y   IDG  K G + EA +L   L      
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + LI G C  G++ +A +LF  +P+  L+ +VVTY  MI  L  DG+ ++A  L
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 363 FLDMEAKGVAPDCVAFNTLM 382
           + +M+  G+ PD   +++L+
Sbjct: 602 YDEMKETGLTPDDTVYSSLV 621



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 204/398 (51%), Gaps = 6/398 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
            F ++     E  V + + +++GLC+ G   +   L +E +   G      K + V Y  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDE-VAAKG-----VKANVVTYNA 269

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            I+G  K   +    E+L  M+ + +  +VVTY  +I GF       EA+RLF EM ++G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++ +V  ++ I+   C++G ++ A  L + M   G+ P+A  Y  L+ G C  G++  A+
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+  G   N   ++ LI+GYC++  ++ AL L   M  KG++  V  YN++  GL
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +FR +       +I
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y+ LIDG  K G +K A +L   L    LI DV T   +IH  C DGK+D A  LF +
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M  +G+ P+ V +  ++ G  ++  + +  +L   M E
Sbjct: 570 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 607



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 6/278 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++   G  P+  TY  LI+G+C+ G    A  L  EM    G+ G+   P  VI
Sbjct: 353 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM---QGK-GIDLNP--VI 406

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T+IDG C+ G VD+A  L + M+ K +  DV  YNS+  G C  N  +EAK L   M+
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV PN ++F+ ++D  CK G   EA ++   M + G  PN   YN L+DG+   G + 
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +L   +E+ G   +V++ + LI+G C + +++ AL L+ EM  +G+ P VVTY  + 
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 586

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            GL +  + E AFKL+DEM+  G+  D   Y + +  L
Sbjct: 587 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 175/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G E +V  Y+++I+  CR+G+   AL LF+EM +     G++  P A 
Sbjct: 317 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PSAH 370

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G+CK G ++ A+ L+ +M+ K I+ + V +N++I G+C +   +EA RL + M
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +V  ++ I   LCK  + +EA  LL  M++ GV PN   + TL+D +C  G  
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 490

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             AK +F  ME  G   N+ +Y++LI+GY K   ++ A  L  E+ ++G+ P V T  +L
Sbjct: 491 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     +V+ A KLFDEM + G+  +   Y   I GL K+G   EA +L+  ++    
Sbjct: 551 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610

Query: 302 ELDIRSYSCLIDGL 315
             D   YS L+  L
Sbjct: 611 TPDDTVYSSLVGSL 624



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 168/336 (50%)

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L + G VD       +M + ++   V +   V+ G C   D    ++L  E+  +GV+ 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT++  ++   K   +   +++L LM + GV  N   Y  L+ GF   G++  A+ LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G + +V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EAL L   +     E D+ +Y
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + +  GLCK  R   A  L  S+    +  + +++  +I   C +G   +A  +F +ME 
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           KG  P+ + +N L+ G  +     +  +L   ++ R
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 126/306 (41%), Gaps = 59/306 (19%)

Query: 138 DELCKNGKMEEASQLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK----------- 185
           D+L K+ K  E   L     +  G+R    V  +L+D  C   + NRAK           
Sbjct: 108 DKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFR 167

Query: 186 ------------ELFVSMESMG-----------------------------------CKH 198
                       E F  ME  G                                    + 
Sbjct: 168 VYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEV 227

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
            V+S +I+++G CK  ++E    L  E+ +KG+K  VVTYN    G F+   +    ++ 
Sbjct: 228 TVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL 287

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
             M++ GVA +   Y   I G    G I EA  LF  +R    E D+  Y+ +I   C+S
Sbjct: 288 TLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 347

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           G +K A  LF  +    LI    TY  +IH +C  G+M+ A  L  +M+ KG+  + V F
Sbjct: 348 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 407

Query: 379 NTLMLG 384
           NTL+ G
Sbjct: 408 NTLIDG 413



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 12/158 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  +F +++  G  PN+ITY+ LI+G  + G+   A  L +E+ N     G++  PD 
Sbjct: 491 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR----GLI--PDV 544

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              T++I G C +G VD A +L  +M  + + P+VVTY ++I G      S EA +L+ E
Sbjct: 545 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 604

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M + G+ P+   +S ++      G +  A + + + IQ
Sbjct: 605 MKETGLTPDDTVYSSLV------GSLHSADESISMQIQ 636



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 13/126 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +L+  G  P+V T ++LI+G C  G   +AL LF+EM     + G+V  P+ V
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM----PQRGLV--PNVV 580

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GL K+G  ++A +L  +MK+  + PD   Y+S++     A++S       I M
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADES-------ISM 633

Query: 122 MDQGVQ 127
             QG Q
Sbjct: 634 QIQGSQ 639


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 219/443 (49%), Gaps = 54/443 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ A GC PN  TY+ L++GLC+ G    AL +F+EM++     G++  P+  I
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKI 244

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-------- 114
           YT ++  LC  G +D+A +LL  MKDK   PD VTYN+ + G C     NEA        
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 115 --------------------KRLFIE-------MMDQGVQPNVVTFSVIMDELCKNGKME 147
                                R F E       M+++ + P+VV +++++    + G++E
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A   L++M + G  P+ F YNT++   C  G + RA  L   M       +  + +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ----- 262
            G CK   ++ A+ ++ EM   G  PTV+TYN L  G +   ++E A  LF +M+     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 263 ----RHGVAA----DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
               R  + A    D+ + R  +  +C++G +++A +L R++       D+ +Y+ LI+G
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+  L  A  LF  L    +  D +TY  +I  L    + + A  LF ++   G +P 
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 375 CVAFNTLMLGCIRNNETSKVVEL 397
              +N++M    R  + S+ + L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINL 627



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 196/448 (43%), Gaps = 57/448 (12%)

Query: 5   ALFTKL---KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A+F  L   +A G   +   ++ L+      G    A+  F  M     EF    +P A 
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRM----DEFQ--SRPTAF 173

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TI+  L   G +  A  L  +M      P+  TYN ++ G C    + +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PNV  ++V++  LC  GK++EA QLL  M   G  P+   YN  + G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I P VV Y  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID----------------------- 278
             G  E  ++E A    D M++ G   DT+ Y T +                        
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 279 ------------GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                       GLCK G + EA+++F  +    C+  + +Y+ LIDG  + GRL+ A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 327 LFHSLPRG-------------VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           LFH +  G               + D  +   ++H +C  G++ KA+ L   +   GV P
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V +NTL+ G  +       V L   +
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKEL 561



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 195/514 (37%), Gaps = 116/514 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC-- 56
           EA  L   +K  GC P+ +TY+  ++GLC+ G    A      + +G    G  G  C  
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V+YT +I G  + G ++ A   L  MK K   
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD   YN+V++  C   D   A  L  EM+   +  +  T ++++  LCK G ++EA Q+
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-------------------- 192
            + M + G  P    YN L+DGF   GR+  A+ LF  ME                    
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499

Query: 193 ----------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
                                         G   +V +Y+ LING CK + ++GA+ L+ 
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  KGI P  +TY TL  GL   H+   A  LF  + + G +     Y + +  LC+  
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619

Query: 285 YIVEALELFRTLRILKCELDIRS------------------------------------Y 308
            + +A+ L+      K    + S                                    Y
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPY 679

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           +  + GLC+  R   A  +FH+L    +        ++I+ LC D  ++ A D+ L   +
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALS 739

Query: 369 KGVAPDCVAFNTLMLG---CIRNNETSKVVELLH 399
           K +       N L+     C R  +   +   +H
Sbjct: 740 KSIILSQPVGNRLLRWLCICYRRQDAQALAWRMH 773



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 135/307 (43%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            + +++     A  + +A + F  M +   +P    ++ I+  L  +G +  A  L   M
Sbjct: 139 AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G  PN   YN LMDG C  G    A ++F  M   G   NV  Y++L++  C   +I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L   M  KG  P  VTYN    GL ++ +V  AF+    +Q  G A     Y   
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDGL +     E    ++T+       D+  Y+ +I G  ++GR++ A      + +   
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + D   YN ++  LC  G +++AH L  +M    +  D      ++ G  +     + ++
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438

Query: 397 LLHRMDE 403
           +   M E
Sbjct: 439 IFDEMGE 445



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 183/420 (43%), Gaps = 59/420 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +    +K  G  P+   Y+T++  LC  G    A  L  EM+  N         D+ 
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL------DST 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I GLCK G VD+A ++  +M +   +P V+TYN++I GF Y     E  R+    
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF-YREGRLEEARMLFHK 477

Query: 122 MDQGVQPNVV--------------TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           M+ G  P++               +   ++ ++C++G++ +A +LL  +I  GV P+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YNTL++G C    ++ A  LF  ++  G   +  +Y  LI+G  +      A+ L+  +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLF----------------------------- 258
             G  P++  YN++   L  + ++ +A  L+                             
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSL 657

Query: 259 DEMQRHGVAAD-------TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           D+  R  +  D       +  Y  ++ GLC+     +AL +F TL+    ++     + L
Sbjct: 658 DDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALL 717

Query: 312 IDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           I+ LC    L  A + + ++L + ++++  V  N ++  LC   +   A  L   M   G
Sbjct: 718 INYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLCICYRRQDAQALAWRMHLVG 776



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 19/278 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L   +   G  P+V+TY+TLINGLC+  +   A+ LF+E+ + G         PD
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG-------ISPD 569

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y T+IDGL +    + A  L   +     +P +  YNS++R  C     ++A  L++
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 120 EMMDQGVQPNVVTFSVIMDELC------KNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           + +     P    F V  + L       ++G +++  + L  + Q     ++  Y   + 
Sbjct: 630 DYL-----PKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLI 684

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   R + A  +F +++  G        ++LIN  C ++ +  A+ +    LSK I  
Sbjct: 685 GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIIL 744

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +    N L   L   ++ + A  L   M   G   D +
Sbjct: 745 SQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 196/378 (51%), Gaps = 14/378 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F +L   G  P+V +Y+ L+NGLC    +  AL L   M +  G+    C PD V
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVV 89

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I+G  KEG +DK       M D+ I+P+VVTYNS+I   C A   ++A  +   M
Sbjct: 90  SYSTVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+ +T++ I+   C +G+ +EA   L+ M   GV P+   YN+LMD  C  GR 
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 202

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++F SM   G K ++ +Y  L+ GY     +     L   M+  GI P    ++ L
Sbjct: 203 TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 262

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  +VE A  +F +M++ G+  +   Y T ID LCK+G + +A+  F  +     
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             D   Y+ LI  LC   + + A ELF   L RG+ ++  + +N +I + C +G++ ++ 
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS-TIFFNSIIDSHCKEGRVIESG 381

Query: 361 DLFLDMEAKGVAPDCVAF 378
            LF  M   GV PD +  
Sbjct: 382 KLFDLMVRIGVKPDIITL 399



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 184/349 (52%), Gaps = 12/349 (3%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAK 115
           PD   Y  +++GLC E    +A ELL  M D   +  PDVV+Y++VI GF    D ++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
                M+DQ + PNVVT++ I+  LCK   +++A ++L  M++ GV P+   YN+++ GF
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C +G+   A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KP +
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
            TY TL  G      +     L D M R+G+  + + +   +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      +  +Y  +ID LCKSGR++ A   F  +    L  D + YN +IH+LC   K
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLHRM 401
            +KA +LFL+M  +G+    + FN+++    +     E+ K+ +L+ R+
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 154/314 (49%), Gaps = 9/314 (2%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG--VQPNVVTFSVIMDELCKNGKMEEAS 150
           PDV +YN ++ G C  N S EA  L   M D G    P+VV++S +++   K G +++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGY 210
                M+   + PN   YN+++   C    V++A E+  +M   G   +  +Y+ +++G+
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 211 CKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C + + + A+    +M S G++P VVTYN+L   L +  +   A K+FD M + G+  D 
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y T + G    G +VE   L   +       +   +S L+    K  +++ A  +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +  L  + VTY  +I  LC  G+++ A   F  M  +G+ PD + +N+L+      ++
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 391 TSKVVELLHRMDER 404
             K  EL   M +R
Sbjct: 342 WEKAEELFLEMLDR 355



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 132/260 (50%), Gaps = 10/260 (3%)

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYS 204
           E+A  + + +++ G+ P+ F YN L++G C   R   A EL   M   G  C  +V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING+ K  +++       +ML + I P VVTYN++   L +   V++A ++   M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           GV  D   Y + + G C +G   EA+   + +R    E D+ +Y+ L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            ++F S+ +  L  D+ TY  ++      G + + H L   M   G+ P+   F+ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 385 CIRNNETSKVVELLHRMDER 404
             +  +  + + +  +M ++
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQ 285



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 142/272 (52%), Gaps = 10/272 (3%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNT 170
           +A+ +F E++ +G+ P+V +++++++ LC   + +EA +LL +M   G    P+   Y+T
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G +++  +  +S        NV +Y+ +I   CK + ++ A+ + + M+  G
Sbjct: 94  VINGFFKEGDLDKMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P  +TYN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           ++F ++     + DI +Y  L+ G    G L     L   + R  +  +   ++I++ A 
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
               K+++A  +F  M  +G+ P+ V + T++
Sbjct: 267 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVI 298


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 209/408 (51%), Gaps = 12/408 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L + +   G  PNV+T+ TLING C+ G    A +LF+ M     E      PD + 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIA 323

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+T+IDG  K G +    +L  Q   K +  DVV ++S I  +  + D   A  ++  M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG+ PNVVT+++++  LC++G++ EA  +   +++ G+ P+   Y++L+DGFC  G + 
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
               L+  M  MG   +V  Y +L++G  K   +  A+    +ML + I+  VV +N+L 
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI------DGLCKNGYIVEALELFRTL 296
            G   +++ + A K+F  M  +G+  D   + T +      D  CK+      L+LF  +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +  K   DI   + +I  L K  R++ A + F++L  G +  D+VTYN MI   C+  ++
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D+A  +F  ++     P+ V    L+    +NN+    + +   M E+
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 199/414 (48%), Gaps = 82/414 (19%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ ++   G EP+++TYS+LI+G C+ G+      L+E+MI       +   PD V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVV 462

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  ++DGL K+G +  A    ++M  ++I  +VV +NS+I G+C  N  +EA ++F  M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 122 MDQGVQPNVVTFSVIM------DELCKNGK------------------------------ 145
              G++P+V TF+ +M      D  CK+ K                              
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582

Query: 146 -----MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
                +E+AS+    +I+  + P+   YNT++ G+C   R++ A+ +F  ++      N 
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            + +ILI+  CKN +++GA+ ++S M  KG KP  VTY  L     +   +E +FKLF+E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           MQ  G++                                     I SYS +IDGLCK GR
Sbjct: 703 MQEKGISPS-----------------------------------IVSYSIIIDGLCKRGR 727

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           +  A  +FH      L+ DVV Y I+I   C  G++ +A  L+  M   GV PD
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 209/453 (46%), Gaps = 70/453 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVC----- 56
            A  LF  ++  G EP++I YSTLI+G  + G   +   LF + ++   +  VV      
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    P+ V YT +I GLC++G + +A  +  Q+  + + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P +VTY+S+I GFC   +      L+ +M+  G  P+VV + V++D L K G M  A + 
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY------SIL 206
              M+   +R N  V+N+L+DG+C   R + A ++F  M   G K +V ++      SI+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 207 INGYCKN-----------------------------------KEIEGALSLYSEMLSKGI 231
            + +CK+                                     IE A   ++ ++   +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           +P +VTYNT+  G   + +++ A ++F+ ++      +T      I  LCKN  +  A+ 
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F  +     + +  +Y CL+D   KS  ++ +++LF  +    +   +V+Y+I+I  LC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             G++D+A ++F       + PD VA+  L+ G
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 205/437 (46%), Gaps = 52/437 (11%)

Query: 7   FTKLKAFGCEPN-VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           F KL   G EP+ V  +  +++ L   G    AL+    ++      G+V          
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS------CNK 257

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GL  +  ++ A  LL  + D    P+VVT+ ++I GFC   + + A  LF  M  +G
Sbjct: 258 VLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P+++ +S ++D   K G +    +L    +  GV+ +  V+++ +D +  +G +  A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            ++  M   G   NV +Y+ILI G C++  I  A  +Y ++L +G++P++VTY++L  G 
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV------------------ 287
            +   +   F L+++M + G   D   Y   +DGL K G ++                  
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 288 -----------------EALELFRTLRILKCELDIRSYSCLI------DGLCKSGRLKIA 324
                            EAL++FR + I   + D+ +++ ++      D  CK  +  I 
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +LF  + R  + AD+   N++IH L    +++ A   F ++    + PD V +NT++ G
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616

Query: 385 ---CIRNNETSKVVELL 398
                R +E  ++ ELL
Sbjct: 617 YCSLRRLDEAERIFELL 633



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 200/424 (47%), Gaps = 45/424 (10%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNG-EFGVVCKP-----DAVIYTTIIDGLCKEG 74
           ++ T+ + L R G   VA  +F+EMI   G +F V+        DA +   +++  C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 75  FVDKAKELLL---------------QMKDKNINPDVVT-----YNSVIRG---------- 104
            VDKA E+ +               +M +  I  D V      ++ + RG          
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 105 -------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
                  FC   +  +A      +M++G +  +V+ + ++  L  + ++E AS+LL L++
Sbjct: 221 GFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVL 278

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN   + TL++GFC  G ++RA +LF  ME  G + ++ +YS LI+GY K   + 
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
               L+S+ L KG+K  VV +++      +   +  A  ++  M   G++ +   Y   I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
            GLC++G I EA  ++  +     E  I +YS LIDG CK G L+  + L+  + +    
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVV Y +++  L   G M  A    + M  + +  + V FN+L+ G  R N   + +++
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518

Query: 398 LHRM 401
              M
Sbjct: 519 FRLM 522



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 6/170 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F  LK     PN +T + LI+ LC+      A+ +F  M           KP+AV
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS------KPNAV 678

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D   K   ++ + +L  +M++K I+P +V+Y+ +I G C     +EA  +F + 
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +D  + P+VV +++++   CK G++ EA+ L E M++ GV+P+  +   L
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 56/326 (17%)

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI----------- 157
           ++ N A + F      G  P   +F  I   L +NG  + A ++ + MI           
Sbjct: 81  SEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLG 137

Query: 158 QIGVRP-NAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--------------------- 195
            I  R  +A V   LM+  C  G V++A E+FV    +G                     
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197

Query: 196 ----------CKHNVFSYSILING------YCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
                     C+  +    +  +G      +CK  E+  AL  +  ++ +G +  +V+ N
Sbjct: 198 DLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRVGIVSCN 256

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +  GL  + Q+E A +L   +   G A +   + T I+G CK G +  A +LF+ +   
Sbjct: 257 KVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             E D+ +YS LIDG  K+G L +  +LF  +L +GV + DVV ++  I      G +  
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL-DVVVFSSTIDVYVKSGDLAT 374

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG 384
           A  ++  M  +G++P+ V +  L+ G
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKG 400


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 205/391 (52%), Gaps = 8/391 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+ +TYS L++   + G    A+ LF+EM   NG       P A IYTT++    K G
Sbjct: 198 CFPDTMTYSVLVSAFVKLGRDDYAIRLFDEM-KANG-----LHPTAKIYTTLLAIYFKSG 251

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
             +KA  L+ +MKDK   P V TY  +I+G   +    +A  +F+ M+  G +P+VV  +
Sbjct: 252 -DEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN 310

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-FCLTGRVNRAKELFVSMES 193
            +++   K G++E+A +L + M  +   PN   YNT++   F      + A   F  M++
Sbjct: 311 NLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKA 370

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   + F+YSILI+G+CK   +E AL L  EM  KG  P    Y +L   L +  + E 
Sbjct: 371 NGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 430

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +LF E++ +   +    Y   I  L K G   EA++LF  ++ + C  D+ +Y+ L+ 
Sbjct: 431 ANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMS 490

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL ++G ++ A+    ++       D+ ++NI+++ L   G+ ++A ++F+ M+   + P
Sbjct: 491 GLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKP 550

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           D V++NT++    R+    +  +L+  M  R
Sbjct: 551 DAVSYNTILGSLSRSGMFEEAAKLMREMGSR 581



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 8/381 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF ++KA G  P    Y+TL+    ++G    AL L +EM +        C P    
Sbjct: 221 AIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDE-KALGLVQEMKDKG------CAPTVFT 273

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I GL K G V+ A  + L M      PDVV  N++I  F  A    +A +LF +M 
Sbjct: 274 YTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMR 333

Query: 123 DQGVQPNVVTFSVIMDELCKN-GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                PNVVT++ ++  L ++     EA+   E M   GV P++F Y+ L+DGFC T RV
Sbjct: 334 SLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRV 393

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A  L   M+  G      +Y  LIN   K K  E A  L+ E+     + +   Y  +
Sbjct: 394 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  +   A  LF+EM++ G   D +AY   + GL + G I EA    RT+    C
Sbjct: 454 IKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGC 513

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ S++ +++GL ++GR + A E+F  +   ++  D V+YN ++ +L   G  ++A  
Sbjct: 514 TPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAK 573

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L  +M ++G   D + +++++
Sbjct: 574 LMREMGSRGFEYDHITYSSIL 594



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 179/358 (50%), Gaps = 10/358 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K  GC P V TY+ LI GL ++G    A ++F  M+         CKPD V
Sbjct: 254 KALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDG------CKPDVV 307

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG-FCYANDSNEAKRLFIE 120
           +   +I+   K G ++ A +L  QM+     P+VVTYN+VI+  F     ++EA   F +
Sbjct: 308 LINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEK 367

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P+  T+S+++D  CK  ++E+A  LLE M + G  P    Y +L++      R
Sbjct: 368 MKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 427

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A ELF+ ++    + +   Y+++I    K      A+ L++EM   G  P V  YN 
Sbjct: 428 YEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNA 487

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL     +E AF     M+ +G   D  ++   ++GL + G   +A E+F  ++   
Sbjct: 488 LMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSL 547

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            + D  SY+ ++  L +SG  + A +L   +       D +TY+ ++ A+   GK+D+
Sbjct: 548 IKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAV---GKVDE 602



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 182/425 (42%), Gaps = 43/425 (10%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           E ++ TY  LI  L   G       + +EM+         C       + ++  L K   
Sbjct: 92  EHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSP-----TCVIGPADLSEVVKILGKAKM 146

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVI---------------------RGFCYAND---- 110
           V+KA  +  Q+K +   P   TYNS+I                      G C+ +     
Sbjct: 147 VNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYS 206

Query: 111 -----------SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
                       + A RLF EM   G+ P    ++ ++    K+G  E+A  L++ M   
Sbjct: 207 VLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDK 265

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  P  F Y  L+ G   +GRV  A  +F++M   GCK +V   + LIN + K   +E A
Sbjct: 266 GCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDA 325

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L L+ +M S    P VVTYNT+   LFE       A   F++M+ +GV   ++ Y   ID
Sbjct: 326 LKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILID 385

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G CK   + +AL L   +          +Y  LI+ L K+ R + A ELF  L      +
Sbjct: 386 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRS 445

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
               Y +MI  L   G+  +A DLF +M+  G  PD  A+N LM G +R     +    L
Sbjct: 446 SARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSAL 505

Query: 399 HRMDE 403
             M+E
Sbjct: 506 RTMEE 510



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +    ++  GC P++ +++ ++NGL RTG    A  +F +M +       + KPDAV
Sbjct: 500 EAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDS------LIKPDAV 553

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
            Y TI+  L + G  ++A +L+ +M  +    D +TY+S++      ++ +E 
Sbjct: 554 SYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDEP 606


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 183/321 (57%), Gaps = 2/321 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           PD +  T++I G CK G   KA  ++  ++D    PDV+TYN +I G C      +A++L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+ +G  P+VVTF+++++ LC+ G +  A  +LE M + G  PN+  YN L+ GFC 
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
             ++ RA E    M S GC  ++ +Y+ L+   CK+ +++ A+ L +++ SKG  P ++T
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNT+  GL ++ + ++A KL DEM+  G+  D   Y + + GL + G + EA++ F  L 
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +L  + +  +Y+ ++ GLCK+ +   A + L + + RG    +  +Y I+I  L  +G  
Sbjct: 357 VLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTE-ASYTILIEGLAYEGLA 415

Query: 357 DKAHDLFLDMEAKGVAPDCVA 377
            +A +L  ++  +GV     A
Sbjct: 416 KEALELLNELCLRGVVKKSSA 436



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 20/381 (5%)

Query: 25  LINGLCRTGHT----IVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           L NG    GH     I +L  FEE+ + N            +   + +G  +EGF     
Sbjct: 61  LPNGHLGNGHVSLSPIHSLTNFEEIESNNN-----------LSKLVRNGELEEGF----- 104

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
             L  M  +   PD++   S+IRGFC    + +A R+   + D G  P+V+T++V++  +
Sbjct: 105 RFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGM 164

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   GC  N 
Sbjct: 165 CSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNS 224

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            SY+ L++G+CK K++E A+    +M S+G  P +VTYNTL   L +  +V+ A +L ++
Sbjct: 225 LSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQ 284

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           +   G +     Y T IDGL K G   +A +L   +R    + DI +YS L+ GL + G+
Sbjct: 285 LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           +  A + FH L    +  + +TYN ++  LC   K D+A D    M  +G  P   ++  
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           L+ G        + +ELL+ +
Sbjct: 405 LIEGLAYEGLAKEALELLNEL 425



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 150/283 (53%), Gaps = 6/283 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+VITY+ LI+G+C TG  + A  L  +M+         C P  V +  +I+ LC++
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG------CSPSVVTFNILINFLCRK 202

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G + +A ++L +M      P+ ++YN ++ GFC       A     +M  +G  P++VT+
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LCK+GK++ A +LL  +   G  P    YNT++DG    G+ ++A +L   M +
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G K ++ +YS L+ G  +  +++ A+  + ++   G+KP  +TYN + +GL +  + +R
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           A      M + G      +Y   I+GL   G   EALEL   L
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 154/292 (52%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           E  R    M+ +G  P+++  + ++   CK GK  +A++++E++   G  P+   YN L+
Sbjct: 102 EGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLI 161

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C TGR   A++L   M   GC  +V +++ILIN  C+   +  A+ +  +M   G  
Sbjct: 162 SGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCT 221

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  ++YN L  G  +  ++ERA +   +M   G   D   Y T +  LCK+G +  A+EL
Sbjct: 222 PNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVEL 281

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              L    C   + +Y+ +IDGL K G+   A +L   +    L  D++TY+ ++  L  
Sbjct: 282 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSR 341

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +GK+D+A   F D+E  GV P+ + +N +MLG  +  +T + ++ L  M +R
Sbjct: 342 EGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQR 393



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 7/321 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P++I  ++LI G C+ G T  A  +  E+I  +G       PD + Y  +I G+C  G  
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIM-EIIEDSGAV-----PDVITYNVLISGMCSTGRW 170

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             A++LL  M  +  +P VVT+N +I   C       A  +  +M   G  PN ++++ +
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPL 230

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +   CK  KME A + L  M   G  P+   YNTL+   C  G+V+ A EL   + S GC
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              + +Y+ +I+G  K  + + A  L  EM +KG+KP ++TY++L  GL    +V+ A K
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            F +++  GV  +   Y   + GLCK      A++    +    C+    SY+ LI+GL 
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLA 410

Query: 317 KSGRLKIAWELFHSL-PRGVL 336
             G  K A EL + L  RGV+
Sbjct: 411 YEGLAKEALELLNELCLRGVV 431



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 152/277 (54%), Gaps = 6/277 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M+A  L   +   GC P+V+T++ LIN LCR G    A+++ E+M          C P++
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG------CTPNS 224

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y  ++ G CKE  +++A E L +M  +   PD+VTYN+++   C     + A  L  +
Sbjct: 225 LSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQ 284

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++T++ ++D L K GK ++A++LL+ M   G++P+   Y++L+ G    G+
Sbjct: 285 LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A + F  +E +G K N  +Y+ ++ G CK ++ + A+   + M+ +G KPT  +Y  
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  GL      + A +L +E+   GV   + A +  +
Sbjct: 405 LIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAV 441



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 139/266 (52%)

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           + +L +NG++EE  + LE M+  G  P+     +L+ GFC  G+  +A  +   +E  G 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI+G C       A  L ++M+ +G  P+VVT+N L   L     + RA  
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + ++M +HG   ++ +Y   + G CK   +  A+E    +    C  DI +Y+ L+  LC
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G++  A EL + L        ++TYN +I  L   GK D+A  L  +M AKG+ PD +
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMD 402
            +++L+ G  R  +  + ++  H ++
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLE 356



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 97/193 (50%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N E+E        M+ +G  P ++   +L  G  +I +  +A ++ + ++  G   D  
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   I G+C  G  ++A +L   +    C   + +++ LI+ LC+ G L  A ++   +
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           P+     + ++YN ++H  C + KM++A +    M ++G  PD V +NTL+    ++ + 
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 392 SKVVELLHRMDER 404
              VELL+++  +
Sbjct: 276 DAAVELLNQLSSK 288


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 215/443 (48%), Gaps = 44/443 (9%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM----------------- 45
           A  +F +LK  G  P + T+ T+ING C+ G  + +  L  E+                 
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318

Query: 46  --------INGNGEFGVV----CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                   ++     G +    CKPD   Y  +I+ LCKEG  + A   L +   K + P
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + ++Y  +I+ +C + + + A +L ++M ++G +P++VT+ +++  L  +G M++A  + 
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
             +I  GV P+A +YN LM G C TGR   AK LF  M       + + Y+ LI+G+ ++
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            + + A  ++S  + KG+K  VV +N +  G      ++ A    + M    +  D + Y
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            T IDG  K   +  A+++FR +   KC+ ++ +Y+ LI+G C  G  K+A E F  +  
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618

Query: 334 GVLIADVVTYNIMIHALCADGK-MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR----- 387
             L+ +VVTY  +I +L  +   ++KA   +  M      P+ V FN L+ G ++     
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGK 678

Query: 388 ---------NNETSKVVELLHRM 401
                    + ++S   E  HRM
Sbjct: 679 VLAEPDGSNHGQSSLFSEFFHRM 701



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 190/389 (48%), Gaps = 10/389 (2%)

Query: 18  NVITYST--LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +V  YST  L+ G+C  G   V   L E      G +G  C P+ V Y TII G CK G 
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIE------GRWGKGCIPNIVFYNTIIGGYCKLGD 255

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           ++ A  +  ++K K   P + T+ ++I GFC   D   + RL  E+ ++G++ +V   + 
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+D   ++G   + ++ +  +I    +P+   YN L++  C  G+   A          G
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  SY+ LI  YCK+KE + A  L  +M  +G KP +VTY  L  GL     ++ A 
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +  ++   GV+ D   Y   + GLCK G  + A  LF  +       D   Y+ LIDG 
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495

Query: 316 CKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            +SG    A ++F  S+ +GV + DVV +N MI   C  G +D+A      M  + + PD
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKV-DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              ++T++ G ++  + +  +++   M++
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEK 583



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 31/390 (7%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L  ++   GC+P+++TY  LI+GL  +GH   A+N+  ++I+     GV   PDA I
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR----GV--SPDAAI 452

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++ GLCK G    AK L  +M D+NI PD   Y ++I GF  + D +EA+++F   +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV+ +VV  + ++   C++G ++EA   +  M +  + P+ F Y+T++DG+     + 
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  ME   CK NV +Y+ LING+C   + + A   + EM  + + P VVTY TL 
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632

Query: 243 IGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             L  E   +E+A   ++ M  +    +   +   + G  K           +T   +  
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK-----------KTSGKVLA 681

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D  ++          G+  +  E FH +           YN  +  LC  G M K   
Sbjct: 682 EPDGSNH----------GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHG-MVKTAC 730

Query: 362 LFLD-MEAKGVAPDCVAFNTLMLG-CIRNN 389
           +F D M  KG +PD V+F  ++ G C+  N
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 12/392 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI-YTT--IIDGLCKE 73
           P+VI  ++L++ L ++     A  +++EM +         + D+V  Y+T  ++ G+C E
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCD---------RGDSVDNYSTCILVKGMCNE 218

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V+  ++L+     K   P++V YN++I G+C   D   A  +F E+  +G  P + TF
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
             +++  CK G    + +LL  + + G+R + +  N ++D     G      E    + +
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
             CK +V +Y+ILIN  CK  + E A+    E   KG+ P  ++Y  L     +  + + 
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A KL  +M   G   D   Y   I GL  +G++ +A+ +   L       D   Y+ L+ 
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK+GR   A  LF  +    ++ D   Y  +I      G  D+A  +F     KGV  
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D V  N ++ G  R+    + +  ++RM+E +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 23/337 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  KL   G  P+   Y+ L++GLC+TG  + A  LF EM++ N        PDA 
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN------ILPDAY 486

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+IDG  + G  D+A+++     +K +  DVV +N++I+GFC +   +EA      M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+  T+S I+D   K   M  A ++   M +   +PN   Y +L++GFC  G  
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPTVVTYNT 240
             A+E F  M+      NV +Y+ LI    K +  +E A+  +  M++    P  VT+N 
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666

Query: 241 LFIGLFEI-------------HQVERAF-KLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G  +              H     F + F  M+  G +    AY + +  LC +G +
Sbjct: 667 LLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMV 726

Query: 287 VEALELFRTLRILKC-ELDIRSYSCLIDGLCKSGRLK 322
             A  +F+   + K    D  S++ ++ G C  G  K
Sbjct: 727 KTAC-MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 164/344 (47%), Gaps = 5/344 (1%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF---IE 120
           ++ +  L +    ++ +++L  ++++N+       + V+  +  +   ++A  ++   +E
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE 162

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + D    P+V+  + ++  L K+ ++ +A ++ + M   G   + +    L+ G C  G+
Sbjct: 163 LYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V   ++L       GC  N+  Y+ +I GYCK  +IE A  ++ E+  KG  PT+ T+ T
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G  +      + +L  E++  G+    W     ID   ++GY V+  E    +    
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ D+ +Y+ LI+ LCK G+ ++A        +  LI + ++Y  +I A C   + D A 
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L L M  +G  PD V +  L+ G + +      V +  ++ +R
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 21/299 (7%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  LF+++      P+   Y+TLI+G  R+G    A  +F   +    E GV  K D 
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV----EKGV--KVDV 520

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +  +I G C+ G +D+A   + +M ++++ PD  TY+++I G+    D   A ++F  
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-TG 179
           M     +PNVVT++ +++  C  G  + A +  + M    + PN   Y TL+      + 
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCK----------NKEIEGALSLYSE---- 225
            + +A   +  M +  C  N  +++ L+ G+ K          +    G  SL+SE    
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           M S G       YN+  + L     V+ A    D+M + G + D  ++   + G C  G
Sbjct: 701 MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 21/200 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F  ++   C+PNV+TY++LING C  G   +A   F+EM   +        P+ V 
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD------LVPNVVT 627

Query: 63  YTTIIDGLCKE-GFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------CYANDSN 112
           YTT+I  L KE   ++KA      M      P+ VT+N +++GF            + SN
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687

Query: 113 EAK-----RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
             +       F  M   G   +   ++  +  LC +G ++ A    + M++ G  P+   
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747

Query: 168 YNTLMDGFCLTGRVNRAKEL 187
           +  ++ GFC+ G   + + +
Sbjct: 748 FAAILHGFCVVGNSKQWRNM 767


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 200/376 (53%), Gaps = 8/376 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIID 68
           ++  G +PNV++Y+T+I+G    G+   A  + + M + G        +PD+  Y ++I 
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG-------IEPDSYTYGSLIS 251

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           G+CKEG +++A  L  +M +  + P+ VTYN++I G+C   D   A     EM+ +G+ P
Sbjct: 252 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 311

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           +V T+++++  L   G+M EA  +++ M + G+ P+A  YN L++G+   G   RA +L 
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M S G +    +Y+ LI    +   ++ A  L+ ++L +G+ P V+ +N +  G    
Sbjct: 372 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCAN 431

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
             VERAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  SY
Sbjct: 432 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISY 491

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M  
Sbjct: 492 NTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551

Query: 369 KGVAPDCVAFNTLMLG 384
           KG++PD   + +L+ G
Sbjct: 552 KGISPDDSTYLSLIEG 567



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 5/370 (1%)

Query: 37  VALNLFEEMINGNGEF-----GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           +  +L E  +    EF     G+  KP+ V Y TII G    G ++ A+ +L  M+ K I
Sbjct: 180 IVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 239

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD  TY S+I G C      EA  LF +M++ G+ PN VT++ ++D  C  G +E A  
Sbjct: 240 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 299

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
             + M++ G+ P+   YN L+    + GR+  A ++   M   G   +  +Y+ILINGY 
Sbjct: 300 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 359

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +    + A  L++EMLSKGI+PT VTY +L   L   ++++ A  LF+++   GV+ D  
Sbjct: 360 RCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 419

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            +   IDG C NG +  A  L + +       D  +++ L+ G C+ G+++ A  L   +
Sbjct: 420 MFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +  D ++YN +I      G +  A  +  +M + G  P  + +N L+    +N E 
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 539

Query: 392 SKVVELLHRM 401
               ELL  M
Sbjct: 540 DLAEELLKEM 549



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 6/314 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+ LF K+   G  PN +TY+TLI+G C  G    A +  +EM+      G++  P   
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK----GIM--PSVS 314

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  L  EG + +A +++ +M+ K I PD +TYN +I G+    ++  A  L  EM
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P  VT++ ++  L +  +M+EA  L E ++  GV P+  ++N ++DG C  G V
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RA  L   M+      +  +++ L+ G C+  ++E A  L  EM  +GIKP  ++YNTL
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      ++ AF + DEM   G       Y   I  LCKN     A EL + +     
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 554

Query: 302 ELDIRSYSCLIDGL 315
             D  +Y  LI+G+
Sbjct: 555 SPDDSTYLSLIEGM 568



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 6/348 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   ++  G EP+  TY +LI+G+C+ G    A  LF++M+    E G+V  P+AV 
Sbjct: 227 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 280

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+IDG C +G +++A     +M  K I P V TYN ++          EA  +  EM 
Sbjct: 281 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 340

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +T++++++   + G  + A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 341 KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +LF  +   G   +V  ++ +I+G+C N  +E A  L  EM  K + P  VT+NTL 
Sbjct: 401 EADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 460

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +VE A  L DEM+  G+  D  +Y T I G  + G I +A  +   +  +   
Sbjct: 461 QGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFN 520

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             + +Y+ LI  LCK+    +A EL   +    +  D  TY  +I  +
Sbjct: 521 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 1/290 (0%)

Query: 116 RLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           R FI  M+  G +PNVV+++ I+      G +E A ++L+ M   G+ P+++ Y +L+ G
Sbjct: 193 REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 252

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            C  GR+  A  LF  M  +G   N  +Y+ LI+GYC   ++E A S   EM+ KGI P+
Sbjct: 253 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 312

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
           V TYN L   LF   ++  A  +  EM++ G+  D   Y   I+G  + G    A +L  
Sbjct: 313 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHN 372

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     E    +Y+ LI  L +  R+K A +LF  +    +  DV+ +N MI   CA+G
Sbjct: 373 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANG 432

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +++A  L  +M+ K V PD V FNTLM G  R  +  +   LL  M  R
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 2/275 (0%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           V  S++ D L   GK+++A + +  M  +G +PN   YNT++ G+   G +  A+ +  +
Sbjct: 176 VKSSIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 233

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G + + ++Y  LI+G CK   +E A  L+ +M+  G+ P  VTYNTL  G      
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 293

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +ERAF   DEM + G+      Y   +  L   G + EA ++ + +R      D  +Y+ 
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+G  + G  K A++L + +    +    VTY  +I+ L    +M +A DLF  +  +G
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           V+PD + FN ++ G   N    +   LL  MD ++
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 44/224 (19%)

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N+E+   L+L  + LS  +K ++V        L E  ++++A +    M+  G   +  +
Sbjct: 160 NRELFDELTLSRDRLS--VKSSIV------FDLLE-GKLKKAREFIGFMEGLGFKPNVVS 210

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL- 331
           Y T I G    G I  A  +   +R+   E D  +Y  LI G+CK GRL+ A  LF  + 
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 270

Query: 332 -----PRGV-----------------------------LIADVVTYNIMIHALCADGKMD 357
                P  V                             ++  V TYN+++HAL  +G+M 
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A D+  +M  KG+ PD + +N L+ G  R     +  +L + M
Sbjct: 331 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 190/371 (51%), Gaps = 25/371 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+V T++ LI  LC+      A+ + EEM      +G+V  PD   +TT++ G  +E
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEM----SSYGLV--PDEKTFTTLMQGFIEE 241

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D A  +  QM D       VT N ++ GFC      EA                ++F
Sbjct: 242 GNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEA----------------LSF 285

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
              +DE+   GK   A +L   M   G +P+ F YN L+D  C  G++  A  L   ME 
Sbjct: 286 ---IDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEI 342

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC  NV +Y+ LI+G+CKNK+IE A  ++ +M  +G+    VTYNTL  GL +  +V+ 
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQE 402

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +L D+M   G+  D + Y + +   C+ G I +A ++ +T+    CE DI +Y  LI 
Sbjct: 403 AAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIG 462

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK+GR+++A  L  S+    ++     YN +I AL    +  +A  LF +ME KG  P
Sbjct: 463 GLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTP 522

Query: 374 DCVAFNTLMLG 384
           D   +  +  G
Sbjct: 523 DAFTYKIVFRG 533



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 11/314 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV----------CKPDAVIY 63
           GC    +T + L++G C+ G    AL+  +EM N       +          C+PD   Y
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTY 317

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
             +ID LC  G + +A  LL +M+      +V+TYN++I GFC      EA+ +F +M  
Sbjct: 318 NMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI 377

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           QG+  N VT++ ++D LCK+ +++EA+QL++ MI  G++P+ F YN+++  FC  G + +
Sbjct: 378 QGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQK 437

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A ++  +M S GC+ ++ +Y  LI G CK   +E A  L   +  KG+  T   YN +  
Sbjct: 438 AADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQ 497

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEALELFRTLRILKCE 302
            LF+  + + A +LF EM+  G   D + Y+    GL  + G I EA++    +      
Sbjct: 498 ALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFL 557

Query: 303 LDIRSYSCLIDGLC 316
            +  S+  L +GLC
Sbjct: 558 PEFSSFYMLAEGLC 571



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 162/333 (48%), Gaps = 22/333 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++ ++G  P+  T++TL+ G    G+   A  + E+M++        C    V 
Sbjct: 212 AILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG------CPVTNVT 265

Query: 63  YTTIIDGLCKEG-------FVDK---------AKELLLQMKDKNINPDVVTYNSVIRGFC 106
              ++ G CKEG       F+D+         A EL  +MK+K   PD  TYN +I   C
Sbjct: 266 VNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLC 325

Query: 107 YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAF 166
           Y     EA  L  EM   G   NV+T++ ++D  CKN K+EEA ++ + M   G+  N+ 
Sbjct: 326 YRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSV 385

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YNTL+DG C + RV  A +L   M   G K + F+Y+ ++  +C+  +I+ A  +   M
Sbjct: 386 TYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTM 445

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
            S G +P +VTY TL  GL +  +VE A +L   +Q  G+     AY   I  L K    
Sbjct: 446 TSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRT 505

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            EA+ LFR +       D  +Y  +  GL  SG
Sbjct: 506 KEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG 538



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 129/260 (49%), Gaps = 9/260 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  L  +++  GC  NVITY+TLI+G C+      A  +F++M I G          ++
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG-------LSRNS 384

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T+IDGLCK   V +A +L+ QM  + + PD  TYNS++  FC   D  +A  +   
Sbjct: 385 VTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQT 444

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +P++VT+  ++  LCK G++E AS+LL  +   G+      YN ++       R
Sbjct: 445 MTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKR 504

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPTVVTYN 239
              A  LF  ME  G   + F+Y I+  G   +   I  A+    EM+ KG  P   ++ 
Sbjct: 505 TKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFY 564

Query: 240 TLFIGLFEIHQVERAFKLFD 259
            L  GL  +   +   KL D
Sbjct: 565 MLAEGLCSLSMEDTLIKLVD 584



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 17/332 (5%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K  N  P+   Y  ++R        N  K +  EM     Q +     + +D   K    
Sbjct: 79  KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138

Query: 147 EEASQLLELM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           EE   ++E+M ++ G+  +  +YN L++      ++   + +  +M S G K +V +++I
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNI 198

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI   CK  +I  A+ +  EM S G+ P   T+ TL  G  E   ++ AF++ ++M   G
Sbjct: 199 LIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG 258

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAL----------------ELFRTLRILKCELDIRSYS 309
                      + G CK G I EAL                EL+  ++   C+ D  +Y+
Sbjct: 259 CPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYN 318

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LID LC  G+L+ A  L   +       +V+TYN +I   C + K+++A ++F  ME +
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G++ + V +NTL+ G  ++    +  +L+ +M
Sbjct: 379 GLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 7/158 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +AA +   + + GCEP+++TY TLI GLC+ G   VA  L   +       G+V  P A 
Sbjct: 437 KAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK----GMVLTPHA- 491

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS-NEAKRLFIE 120
            Y  +I  L K     +A  L  +M++K   PD  TY  V RG   +     EA    IE
Sbjct: 492 -YNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE 550

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M+++G  P   +F ++ + LC     +   +L++L+++
Sbjct: 551 MIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVME 588


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 199/403 (49%), Gaps = 28/403 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +LF+++K  GC P+V+T+++LI+G  + G       L EEM          CK D V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+  CK G ++ A      MK + +  +VVT+++ +  FC      EA +LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  T++ ++D  CK G++++A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++  +  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK------------------- 282
             GL  +H+++ A  L  +M   G+  +   Y T +D   K                   
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 283 ---NGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
              NG + EA++LF  +      LD   Y+ L+DG  K G L  A+ L   +    L  D
Sbjct: 500 QPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 559

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
           +  Y   I   C    M +A ++F +M   G+APD   +N L+
Sbjct: 560 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 196/422 (46%), Gaps = 32/422 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A     +++     PN  T + ++  L R     +   LFE++            P+  
Sbjct: 140 DAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNVF 189

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +ID LCKEG + +A+ L  +MK+    PDVVT+NS+I G+    + +E ++L  EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +VVT++ +++  CK G+ME A      M + GV  N   ++T +D FC  G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+   VVTY  L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +V  A  +   M++ GV A+   Y T I G   N    +AL L   ++    
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK------ 355
           ELDI  Y  LI GLC   +L  A  L   +    L  + + Y  M+ A    GK      
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 356 ----------------MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
                           +++A  LF +M  KG++ D V +  L+ G ++         L  
Sbjct: 490 MLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 549

Query: 400 RM 401
           +M
Sbjct: 550 KM 551



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           A +  T++  L   G +D A   + ++++  + P+  T N ++            +RLF 
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF- 180

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +Q   PNV TF++++D LCK G++ EA  L   M ++G  P+   +N+L+DG+   G
Sbjct: 181 ---EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++  ++L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+   VVT++
Sbjct: 238 ELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFS 297

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           T      +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +   
Sbjct: 298 TFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQ 357

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              L++ +Y+ L+DGLCK  ++  A ++   + +  + A+ + Y  +IH    +   +KA
Sbjct: 358 GVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKA 417

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             L  +M+ KG+  D   +  L+ G    ++  +   LL +MDE
Sbjct: 418 LGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 4/293 (1%)

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           ++A R    + +  V PN  T + I+  L +    + + +L+  + +    PN F +N +
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIV 194

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  G +  A+ LF  M+ MGC  +V +++ LI+GY K  E++    L  EM   G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
           K  VVTYN L     +  ++E A+  F  M+R GV A+   + TF+D  CK G + EA++
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LF  +R+    L+  +Y+CLIDG CK+GRL  A  L   + R  +  +VVTY +++  LC
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC 374

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + K+ +A D+   ME  GV  + + + TL+ G   N  + K + LL  M  +
Sbjct: 375 KERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 63/307 (20%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  LF +++  G   N  TY+ LI+G C+ G    A+ L +EM+       VV      
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV------ 364

Query: 62  IYTTIIDGLCKEGFV-----------------------------------DKAKELLLQM 86
            YT ++DGLCKE  V                                   +KA  LL +M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K+K +  D+  Y ++I+G C  +  +EAK L  +M + G++PN + ++ +MD   K+GK+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 147 EEASQLLELMIQIGVRPN----------------------AFVYNTLMDGFCLTGRVNRA 184
            EA  +L+ ++  G +PN                        VY  L+DG+   G ++ A
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI P    YN L   
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQ 604

Query: 245 LFEIHQV 251
           + EI ++
Sbjct: 605 IPEIREL 611



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 28/240 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++  G   N + Y+TLI+G     ++  AL L  EM N   E       D  
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL------DIS 434

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVI------------------- 102
           +Y  +I GLC    +D+AK LL +M +  + P+ + Y +++                   
Sbjct: 435 LYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494

Query: 103 --RGFCYANDS-NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
              GF   N   NEA +LF EM+ +G+  + V ++ ++D   K G + +A  L   MI  
Sbjct: 495 LDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 554

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G++ + F Y   + GFC    +  A+E+F  M   G   +   Y+ LI    + +E+ G 
Sbjct: 555 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRELGGG 614


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 201/410 (49%), Gaps = 14/410 (3%)

Query: 4   AALFTK--LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           AA F +  L A    P+   ++TL++ L + G       LF  M + +       +P+ V
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDAS------VRPNVV 173

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM--KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            Y  ++ GLCK G V  A  +L  M   + ++ PDVV  N+++ G C      +A +   
Sbjct: 174 TYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVE 233

Query: 120 EMMD--QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           E M    G  PN VT++ +    C+ G +  A +L+  M +  V PNA   NT++ G C 
Sbjct: 234 ERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCW 293

Query: 178 TGRVNRAKELFVSMESMG--CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
            GRV  A E F    ++    + N  +YS L+  +     +  A+ L+ EM+ +G  P  
Sbjct: 294 VGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDA 353

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           + Y T+  GL +  +++ A+ +   M++ G   D  AY   I G C+   + EA EL   
Sbjct: 354 IMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGE 413

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++    + D+ +Y+ L+ GLCK+G      EL   +  G     VVT+  +IH  C  G+
Sbjct: 414 MKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQ 473

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +D+A  +F  M+  G+ P+ V +NTL+    ++ +TS  +EL   M E++
Sbjct: 474 IDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKH 523



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 192/403 (47%), Gaps = 10/403 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           LF  ++     PNV+TY  L+ GLC+ G    AL++ + M   +G    VC PD V+   
Sbjct: 159 LFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGM---SGPESDVC-PDVVMLNN 214

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNIN---PDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           I+DGLCK G + +A + + + + ++++   P+ VTYN +   FC A +   A  L  +M 
Sbjct: 215 IVDGLCKTGRLQQAVKFV-EERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKME 273

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLL--ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + V PN VT + I+  LC  G++  A +    +  +    R NA  Y+TL+  F  T  
Sbjct: 274 KERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNN 333

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V  A ELF  M   G   +   Y  +I+G  +   ++ A S+ + M   G +     YN 
Sbjct: 334 VGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNI 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     ++  A++L  EM+  G+  D + Y T + GLCK G  +   EL   +    
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C   + ++  LI G CK G++  A  +F S+    +  + V YN +I  LC       A 
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +LF +M  K V  +   FN L+ G    N   K  EL+  M E
Sbjct: 514 ELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMRE 556



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 179/347 (51%), Gaps = 8/347 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC PN +TY+ L +  CR G+  +A  L  +M            P+AV   TI+ GLC  
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKER------VTPNAVTLNTIVGGLCWV 294

Query: 74  GFVDKAKELLLQMKD--KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           G V  A E   + +        + VTY++++  F + N+   A  LF EM+D+G  P+ +
Sbjct: 295 GRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAI 354

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            +  ++  L + G++++A  +   M + G + +A  YN L+ GFC   R+N A EL   M
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM 414

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           +  G + +V++Y+ L++G CK  +      L  +M+  G +P+VVT+ TL  G  ++ Q+
Sbjct: 415 KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQI 474

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A ++F  M   G+  +T  Y T ID LCK+     A+ELF  +R      ++ +++ L
Sbjct: 475 DEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNAL 534

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           + GL      + A+EL   +  G    D VT +I++  L   G+ D+
Sbjct: 535 LKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 6/187 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++K  G +P+V TY+TL++GLC+ G  +    L  +MI+G       C+P  V
Sbjct: 406 EAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG------CRPSVV 459

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G CK G +D+A  +   M +  I P+ V YN++I   C + D++ A  LF EM
Sbjct: 460 TFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEM 519

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V  NV TF+ ++  L      E+A +L++LM +    P+    + LM+   + G  
Sbjct: 520 REKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGET 579

Query: 182 NRAKELF 188
           +R K   
Sbjct: 580 DRLKHFM 586



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  K+   GC P+V+T+ TLI+G C+ G    AL +F  M     E G+  +P+ VIY T
Sbjct: 445 LLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSM----DESGI--QPNTVIYNT 498

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +ID LCK      A EL  +M++K++  +V T+N++++G    N   +A  L   M +  
Sbjct: 499 LIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGR 558

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLE 154
             P+ VT  ++M+ L   G+ +     ++
Sbjct: 559 CTPDYVTIDILMEWLPVIGETDRLKHFMQ 587


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 200/396 (50%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++A G +PNV +Y+  I  L +      A  +  EM N        CKPD + +T 
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG------CKPDVITHTV 349

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I  LC  G +  AK++  +MK  +  PD VTY +++  F    +S     ++  M   G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
              NVV ++ ++D LC+ G++ EA ++ + M Q G+ P  + YN+L+ GF    R   A 
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ELF  M+  G K N +++ + IN Y K+ E   A+  Y  M SKGI P VV  N +  GL
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  ++  A ++F E++  GV+ DT  Y   I    K     EA+++F  +    C  D+
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
              + LID L K+GR   AW++F+ L    L     TYN ++  L  +GK+ +   L  +
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M      P+ + +NT++    +N   +  +++L+ M
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 685



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ L+  L ++G    AL +++ M+      GVV  P    
Sbjct: 223 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVD----GVV--PSVRT 276

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K   V+    LL +M+   + P+V +Y   IR    A   +EA R+  EM 
Sbjct: 277 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME 336

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+V+T +V++  LC  G++ +A  +   M +   +P+   Y TL+D F   G   
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ +M++ G   NV +Y+ +I+  C+   +  AL ++ EM  KGI P   +YN+L 
Sbjct: 397 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 456

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +   A +LF  M  HG   + + +  FI+   K+G  ++A++ +  ++     
Sbjct: 457 SGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 516

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL KSGRL +A  +FH L    +  D +TY +MI       K D+A  +
Sbjct: 517 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F DM      PD +  N+L+    +     +  ++ +++ E N
Sbjct: 577 FYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMN 619



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 181/371 (48%), Gaps = 23/371 (6%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            +EA  L  K K+FG      +Y++LI GL       +A  LF EM     E G  C PD 
Sbjct: 816  LEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEM----KELG--CGPDE 869

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  ++D + K   +++  ++  +M  K      VTYN++I G   +    +A  L+  
Sbjct: 870  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 929

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M QG  P   T+  ++D L K G++E+A  L   M++ G + N  +YN L++G  + G 
Sbjct: 930  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +   LF  M   G   ++ SY+I+I+  CK  ++   L+ + ++L  G++P ++TYN 
Sbjct: 990  TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1049

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL +  ++E A  LF+EMQ+ G+  + + Y + I  L K G   EA +++  L    
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1109

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELF-----------------HSLPRGVLIADVVTY 343
             + ++ +Y+ LI G   SG    A+  +                 H L +  L  D  +Y
Sbjct: 1110 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSY 1169

Query: 344  NIMIHALCADG 354
             I++  + A+G
Sbjct: 1170 EIIVTFINAEG 1180



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 206/415 (49%), Gaps = 30/415 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           EA  +  +++  GC+P+VIT++ LI  LC  G    A ++F +M                
Sbjct: 327 EAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL 386

Query: 49  -----NGEFGVVCK-----------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                NGE   V +            + V YT +ID LC+ G V +A E+  +MK K I 
Sbjct: 387 DKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV 446

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  +YNS+I GF  A+   +A  LF  M   G +PN  T  + ++   K+G+  +A Q 
Sbjct: 447 PEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQR 506

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            ELM   G+ P+    N ++ G   +GR+  AK +F  +++MG   +  +Y+++I    K
Sbjct: 507 YELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSK 566

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             + + A+ ++ +M+     P V+  N+L   L++  + + A+++F +++   +      
Sbjct: 567 ASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGT 626

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL + G + E + L   +       ++ +Y+ ++D LCK+G +  A ++ +S+ 
Sbjct: 627 YNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT 686

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
               I D+ +YN +I+ L  + + ++A  +F  M+ K + PD     T++   ++
Sbjct: 687 TKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFVK 740



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 188/378 (49%), Gaps = 6/378 (1%)

Query: 24   TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELL 83
            +L+ G+ +   T  ++  F E+I  +G        D      +I  LCK+    +A EL+
Sbjct: 769  SLMEGILKKAGTEKSIE-FAEIIASSG-----ITLDDFFLCPLIKHLCKQKKALEAHELV 822

Query: 84   LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
             + K   ++    +YNS+I G    N  + A+ LF EM + G  P+  T+++++D + K+
Sbjct: 823  KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 882

Query: 144  GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
             ++EE  ++ E M + G       YNT++ G   + R+ +A +L+ ++ S G      +Y
Sbjct: 883  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 942

Query: 204  SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
              L++G  K   IE A +L++EML  G K     YN L  G       E+   LF +M  
Sbjct: 943  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1002

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
             G+  D  +Y   ID LCK G + + L  FR L  +  E D+ +Y+ LIDGL KS RL+ 
Sbjct: 1003 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1062

Query: 324  AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            A  LF+ + +  ++ ++ TYN +I  L   GK  +A  ++ ++  KG  P+   +N L+ 
Sbjct: 1063 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1122

Query: 384  GCIRNNETSKVVELLHRM 401
            G   +  T        RM
Sbjct: 1123 GYSVSGSTDSAYAAYGRM 1140



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 197/438 (44%), Gaps = 78/438 (17%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            PN+ITY+T+++ LC+ G    AL++   M          C PD   Y T+I GL KE   
Sbjct: 657  PNLITYNTILDCLCKNGAVNDALDMLYSMTTKG------CIPDLSSYNTVIYGLVKEERY 710

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA----KRLFIE------------ 120
            ++A  +  QMK K + PD  T  +++  F       EA    K  F++            
Sbjct: 711  NEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHS 769

Query: 121  -----MMDQGVQPNV------VTFSVIMDE---------LCKNGKMEEASQLLELMIQIG 160
                 +   G + ++       +  + +D+         LCK  K  EA +L++     G
Sbjct: 770  LMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 829

Query: 161  VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            V      YN+L+ G      ++ A+ LF  M+ +GC  + F+Y++L++   K+  IE  L
Sbjct: 830  VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 889

Query: 221  SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             +  EM  KG + T VTYNT+  GL +  ++E+A  L+  +   G +     Y   +DGL
Sbjct: 890  KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGL 949

Query: 281  CKNGYIVEALELFRTLRILKCEL-----------------------------------DI 305
             K G I +A  LF  +    C+                                    DI
Sbjct: 950  LKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 1009

Query: 306  RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +SY+ +ID LCK+G+L      F  L    L  D++TYN++I  L    ++++A  LF +
Sbjct: 1010 KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1069

Query: 366  MEAKGVAPDCVAFNTLML 383
            M+ KG+ P+   +N+L+L
Sbjct: 1070 MQKKGIVPNLYTYNSLIL 1087



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 196/436 (44%), Gaps = 41/436 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL ++G   +A  +F E+       GV   PD 
Sbjct: 501 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL----KAMGV--SPDT 554

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++   M + N  PDV+  NS+I     A   +EA ++F +
Sbjct: 555 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQ 614

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E   LLE M      PN   YNT++D  C  G 
Sbjct: 615 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 674

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-------------- 226
           VN A ++  SM + GC  ++ SY+ +I G  K +    A S++ +M              
Sbjct: 675 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTI 734

Query: 227 ---------------------LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                L  G K    + ++L  G+ +    E++ +  + +   G
Sbjct: 735 LPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSG 794

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D +     I  LCK    +EA EL +  +     L   SY+ LI GL     + IA 
Sbjct: 795 ITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAE 854

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +       D  TYN+++ A+    ++++   +  +M  KG     V +NT++ G 
Sbjct: 855 GLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGL 914

Query: 386 IRNNETSKVVELLHRM 401
           +++    + ++L + +
Sbjct: 915 VKSRRLEQAIDLYYNL 930



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 182/421 (43%), Gaps = 46/421 (10%)

Query: 31  RTGHTIVALNLFEEMINGNGEFG-----------VVCKPDAVIYTTIIDGLCKEGFVDKA 79
           R  HT  + N   +++  +G  G            + K +   +  I  GL  EG +  A
Sbjct: 164 RVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 223

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              L  MK+  I  +  TYN ++     +    EA  ++  MM  GV P+V T+SV+M  
Sbjct: 224 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVA 283

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             K   +E    LL  M   GV+PN + Y   +       R + A  +   ME+ GCK +
Sbjct: 284 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPD 343

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI   C    I  A  ++ +M     KP  VTY TL     +  + +   ++++
Sbjct: 344 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN 403

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            M+  G   +  AY   ID LC+ G + EALE+F  ++      +  SY+ LI G  K+ 
Sbjct: 404 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 463

Query: 320 RLKIAWELFHSL------PRGV-----------------------------LIADVVTYN 344
           R   A ELF  +      P G                              ++ DVV  N
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523

Query: 345 IMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++  L   G++  A  +F +++A GV+PD + +  ++  C + ++  + V++ + M E 
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583

Query: 405 N 405
           N
Sbjct: 584 N 584



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 64/141 (45%)

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +R  V   T +    +D +  +G + +  E+F  ++    + ++ +++ +  GL   G L
Sbjct: 161 RRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGL 220

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A      +    ++ +  TYN +++ L   G   +A +++  M   GV P    ++ L
Sbjct: 221 RSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVL 280

Query: 382 MLGCIRNNETSKVVELLHRMD 402
           M+   +  +   V+ LL  M+
Sbjct: 281 MVAFGKRRDVETVLWLLREME 301


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 219/443 (49%), Gaps = 54/443 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ A GC PN  TY+ L++GLC+ G    AL +F+EM++     G++  P+  I
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKI 244

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-------- 114
           YT ++  LC  G +D+A +LL  MKDK   PD VTYN+ + G C     NEA        
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 115 --------------------KRLFIE-------MMDQGVQPNVVTFSVIMDELCKNGKME 147
                                R F E       M+++ + P+VV +++++    + G++E
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           +A   L++M + G  P+ F YNT++   C  G + RA  L   M       +  + +I+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ----- 262
            G CK   ++ A+ ++ EM   G  PTV+TYN L  G +   ++E A  LF +M+     
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 263 ----RHGVAA----DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
               R  + A    D+ + R  +  +C++G +++A +L R++       D+ +Y+ LI+G
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+  L  A  LF  L    +  D +TY  +I  L    + + A  LF ++   G +P 
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 375 CVAFNTLMLGCIRNNETSKVVEL 397
              +N++M    R  + S+ + L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINL 627



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 196/448 (43%), Gaps = 57/448 (12%)

Query: 5   ALFTKL---KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           A+F  L   +A G   +   ++ L+      G    A+  F  M     EF    +P A 
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM----DEFQ--SRPTAF 173

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y TI+  L   G +  A  L  +M      P+  TYN ++ G C    + +A ++F EM
Sbjct: 174 VYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEM 233

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PNV  ++V++  LC  GK++EA QLL  M   G  P+   YN  + G C  GRV
Sbjct: 234 LDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV 293

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A +  V ++  G    +  YS LI+G  + +  +     Y  ML + I P VV Y  +
Sbjct: 294 NEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIM 353

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID----------------------- 278
             G  E  ++E A    D M++ G   DT+ Y T +                        
Sbjct: 354 IRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413

Query: 279 ------------GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                       GLCK G + EA+++F  +    C+  + +Y+ LIDG  + GRL+ A  
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARM 473

Query: 327 LFHSLPRG-------------VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           LFH +  G               + D  +   ++H +C  G++ KA+ L   +   GV P
Sbjct: 474 LFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D V +NTL+ G  +       V L   +
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKEL 561



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 195/514 (37%), Gaps = 116/514 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN---GEFGVVC-- 56
           EA  L   +K  GC P+ +TY+  ++GLC+ G    A      + +G    G  G  C  
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLI 319

Query: 57  ------------------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                                    PD V+YT +I G  + G ++ A   L  MK K   
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD   YN+V++  C   D   A  L  EM+   +  +  T ++++  LCK G ++EA Q+
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-------------------- 192
            + M + G  P    YN L+DGF   GR+  A+ LF  ME                    
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499

Query: 193 ----------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
                                         G   +V +Y+ LING CK + ++GA+ L+ 
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  KGI P  +TY TL  GL   H+   A  LF  + + G +     Y + +  LC+  
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMK 619

Query: 285 YIVEALELFRTLRILKCELDIRS------------------------------------Y 308
            + +A+ L+      K    + S                                    Y
Sbjct: 620 KLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPY 679

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           +  + GLC+  R   A  +FH+L    +        ++I+ LC D  ++ A D+ L   +
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALS 739

Query: 369 KGVAPDCVAFNTLMLG---CIRNNETSKVVELLH 399
           K +       N L+     C R  +   +   +H
Sbjct: 740 KSIILSQPVGNRLLRWLCICYRRQDAQALAWRMH 773



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 134/307 (43%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            + +++     A    +A + F  M +   +P    ++ I+  L  +G +  A  L   M
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G  PN   YN LMDG C  G    A ++F  M   G   NV  Y++L++  C   +I
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ L   M  KG  P  VTYN    GL ++ +V  AF+    +Q  G A     Y   
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDGL +     E    ++T+       D+  Y+ +I G  ++GR++ A      + +   
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
           + D   YN ++  LC  G +++AH L  +M    +  D      ++ G  +     + ++
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438

Query: 397 LLHRMDE 403
           +   M E
Sbjct: 439 IFDEMGE 445



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 183/420 (43%), Gaps = 59/420 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +    +K  G  P+   Y+T++  LC  G    A  L  EM+  N         D+ 
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL------DST 418

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I GLCK G VD+A ++  +M +   +P V+TYN++I GF Y     E  R+    
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF-YREGRLEEARMLFHK 477

Query: 122 MDQGVQPNVV--------------TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
           M+ G  P++               +   ++ ++C++G++ +A +LL  +I  GV P+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YNTL++G C    ++ A  LF  ++  G   +  +Y  LI+G  +      A+ L+  +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLF----------------------------- 258
             G  P++  YN++   L  + ++ +A  L+                             
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSL 657

Query: 259 DEMQRHGVAAD-------TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           D+  R  +  D       +  Y  ++ GLC+     +AL +F TL+    ++     + L
Sbjct: 658 DDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALL 717

Query: 312 IDGLCKSGRLKIAWE-LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           I+ LC    L  A + + ++L + ++++  V  N ++  LC   +   A  L   M   G
Sbjct: 718 INYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLRWLCICYRRQDAQALAWRMHLVG 776



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 19/278 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L   +   G  P+V+TY+TLINGLC+  +   A+ LF+E+ + G         PD
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG-------ISPD 569

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y T+IDGL +    + A  L   +     +P +  YNS++R  C     ++A  L++
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 120 EMMDQGVQPNVVTFSVIMDELC------KNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           + +     P    F V  + L       ++G +++  + L  + Q     ++  Y   + 
Sbjct: 630 DYL-----PKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLI 684

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   R + A  +F +++  G        ++LIN  C ++ +  A+ +    LSK I  
Sbjct: 685 GLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIIL 744

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +    N L   L   ++ + A  L   M   G   D +
Sbjct: 745 SQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVY 782


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 207/403 (51%), Gaps = 8/403 (1%)

Query: 1   MEAAALFTKLKAFGCEPNV--ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           ++ AA   K  A  C  +V  ++ S +++G C++G    A  L +EM       GV  K 
Sbjct: 47  LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMP----RHGV--KV 100

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A+ Y +++D   +E   D+  E+L  M+++ I P V TY  ++ G   A D  + + +F
Sbjct: 101 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 160

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  +S +++  C+ G +  AS++ +  +  G+ PN   Y  L++GFC  
Sbjct: 161 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 220

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A+ L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+  V TY
Sbjct: 221 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 280

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 281 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 340

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  + +Y+ ++DG  K G ++ A    + + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 341 NGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDV 400

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF +M+ +G  P+ VA+  L+ G  +   + +  +L   M
Sbjct: 401 ALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 443



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 181/354 (51%), Gaps = 6/354 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           A +   ++  G EP V TY+ L++GL           +FEEM + N         D   Y
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFY 175

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           +++I+  C+ G V +A E+  +     I P+  TY ++I GFC       A+ L  +M  
Sbjct: 176 SSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV 235

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV  N + F+ ++D  C+   +++A ++  +M ++G+  + + YNTL  G     R++ 
Sbjct: 236 RGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDE 295

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK L   M   G + N  SY+ LI+ +C   ++  A  L+ EM   G +P++VTYN +  
Sbjct: 296 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD 355

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   +  A +  +EM++ G+  D ++Y   + G C NG +  AL LF  ++    + 
Sbjct: 356 GYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKP 415

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++ +Y+ LI GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 416 NLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 469



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 3/350 (0%)

Query: 58  PDAVI---YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           PD+V     + ++DG CK G V  A++LL +M    +  + + YNS++  +    D +  
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             +   M ++G++P V T+++++D L     + +   + E M    +  + + Y+++++ 
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 181

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  G V RA E+F      G + N  +Y  LING+CK  ++E A  L ++M  +G+   
Sbjct: 182 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 241

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            + +NT+  G    + V++A ++   M++ G+  D + Y T   GL +   + EA  L R
Sbjct: 242 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 301

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       +  SY+ LI   C  G +  A  LF  +        +VTYN+M+      G
Sbjct: 302 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 361

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +A     +ME KG+ PD  ++  L+ G   N +    + L   M +R
Sbjct: 362 SIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 411



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 5/334 (1%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNS---VIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           G +D A +LL Q       PD VT  S   V+ G+C +     A++L  EM   GV+ N 
Sbjct: 45  GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           + ++ ++D   +    +  +++L++M   G+ P    Y  L+DG      + + + +F  
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 162

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+S     +V+ YS +IN YC+   +  A  ++ E +  GI+P   TY  L  G  +I Q
Sbjct: 163 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 222

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E A  L  +MQ  GV  +   + T IDG C+   + +ALE+   +  +  ELD+ +Y+ 
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L  GL ++ R+  A  L   +    +  + V+Y  +I   C +G M +A  LF +M   G
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P  V +N +M G I+     +     + M+++
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKK 376



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%)

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           S S ++DG CKSGR+  A +L   +PR  +  + + YN ++ A   +   D+  ++   M
Sbjct: 69  SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 128

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           E +G+ P    +  L+ G     + +KV  +   M  +N
Sbjct: 129 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 167


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 192/381 (50%), Gaps = 7/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A + F +LK F    N ++Y+ LIN  C+T     A+ LF EM          C P   
Sbjct: 84  KAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPG------CAPSTS 137

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I GLC+   + +A++   ++         +TYN ++ GFC A+   EA  L  E+
Sbjct: 138 TYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNEL 197

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G       ++ I+D L K GK+ EA      M + GVRP    +  L+DG C   RV
Sbjct: 198 VARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRV 257

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            RAKE+F S    G   +V   S L++G+CK   ++ A  ++  M ++G  P  V+ N L
Sbjct: 258 ARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNIL 317

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  ++ +A ++F+E+ +     D   Y TF+DGLC+   + +A ++   L     
Sbjct: 318 INGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGG 377

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAH 360
             D+  Y+ LI GLC  GRL  A ++F    R    A +  T N++++     G++D+A 
Sbjct: 378 TPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAR 437

Query: 361 DLFLDMEAKGVAPDCVAFNTL 381
           +LF     +GV PDC  F+ +
Sbjct: 438 ELFQRFVERGVQPDCRTFSAM 458



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 190/380 (50%), Gaps = 7/380 (1%)

Query: 26  INGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
           I+ LC++     A + F+E+ +  G        + V Y  +I+  CK   +D+A +L  +
Sbjct: 73  IDSLCKSDMIDKAESWFQELKDFRGLV------NTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           MK     P   TYN++I G C      EA++ +  ++  G   + +T+++++D  CK  +
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           + EA +LL  ++  G    +  YN ++D     G+++ A+  F  ME  G +    ++++
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G CK   +  A  ++   L  G  P+VV  + L  G  +   V+ A+++F+ M   G
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +  +    I+GLCK   + +A E+F  +   + + D+ +YS  +DGLC++ R+  A 
Sbjct: 307 CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQAR 366

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-LDMEAKGVAPDCVAFNTLMLG 384
           ++   L       DVV Y  +I  LC+ G++D+A  +F +DM A G AP+    N L+ G
Sbjct: 367 QVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNG 426

Query: 385 CIRNNETSKVVELLHRMDER 404
                   +  EL  R  ER
Sbjct: 427 FGLAGRLDEARELFQRFVER 446



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 181/370 (48%), Gaps = 9/370 (2%)

Query: 29  LCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKD 88
           LC  G    AL LF  +++        C   A +   ++  L K G  ++  +++  M D
Sbjct: 9   LCHVGKLDEALELFHSLVSDG------CGLPADL---LVRELSKAGRAEECLKVVKLMLD 59

Query: 89  KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
           +    +    N  I   C ++  ++A+  F E+ D     N V+++++++  CK  +++E
Sbjct: 60  RQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDE 119

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A QL   M   G  P+   YNTL+ G C   R+  A++ +  + S G   +  +Y+IL++
Sbjct: 120 AIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVD 179

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G+CK   +  A+ L +E++++G   T   YN +   LF+  ++  A   F+ M++ GV  
Sbjct: 180 GFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRP 239

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
               +   IDGLCK   +  A E+F +         +   SCL+DG CK G +  AW +F
Sbjct: 240 QEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIF 299

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
             +       + V+ NI+I+ LC   ++ +A ++F ++  +   PD V ++T M G  R 
Sbjct: 300 ELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRA 359

Query: 389 NETSKVVELL 398
           +   +  ++L
Sbjct: 360 HRVDQARQVL 369



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 3/336 (0%)

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC  G +D+A EL   +         +  + ++R    A  + E  ++   M+D+     
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
               ++ +D LCK+  +++A    + +       N   YN L++ FC T R++ A +LF 
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M++ GC  +  +Y+ LI G C+ + +  A   Y  +LS G   + +TYN L  G  +  
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +V  A +L +E+   G    +  Y   ID L K G I EA   F  +          +++
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGLCK+ R+  A E+F S         VV  + ++   C  G +D+A  +F  M  +
Sbjct: 246 VLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNR 305

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  P+ V+ N L+ G  +    S+  E+   + +R 
Sbjct: 306 GCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 117/213 (54%), Gaps = 7/213 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F      G  P+V+  S L++G C+ G    A  +FE M N        C P+ V 
Sbjct: 260 AKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG------CTPNDVS 313

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
              +I+GLCK   + +A+E+  ++  +   PDVVTY++ + G C A+  ++A+++   ++
Sbjct: 314 CNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLV 373

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL-MIQIGVRPNAFVYNTLMDGFCLTGRV 181
           D+G  P+VV ++ ++  LC  G+++EA ++ E+ M   G  PN F  N L++GF L GR+
Sbjct: 374 DKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRL 433

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
           + A+ELF      G + +  ++S + N   K +
Sbjct: 434 DEARELFQRFVERGVQPDCRTFSAMANNTAKTE 466


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 201/401 (50%), Gaps = 6/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EAA +  ++++ G    V T + ++     TG    A  +F+ M+   G       PDA 
Sbjct: 132 EAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLL-----PDAR 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I G C++G +++   LL  M+ +    D  T   ++R FC      +   LF  M
Sbjct: 187 SFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRM 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  PNVV ++  +D LCK   +++A  +LE M+  G++PN + + +L++G C  G  
Sbjct: 247 LEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWT 306

Query: 182 NRAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            RA  LF+ + +S   K NV +Y+++I GYCK  ++  A  L   M+ +G+ P   TY T
Sbjct: 307 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 366

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +      AF+L ++M+R G   + + Y   IDGLCK G I EA ++ R      
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +Y+ +I   CK G +  A +LF+ +       D+ TY  +I   C   +M+++ 
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQ 486

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            LF    A  + P    + +++ G  +  +++  + +  RM
Sbjct: 487 KLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERM 527



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E  AL T ++  G   +  T + ++   C+ G       LF  M+    E G    P+ V
Sbjct: 203 EVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRML----EMGT--PPNVV 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT  IDGLCK  +V +A  +L +M  K + P+V T+ S+I G C    +  A RLF+++
Sbjct: 257 NYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKL 316

Query: 122 M-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +     +PNV T++V++   CK GK+  A  LL  M++ G+ PN   Y TL+ G C  G 
Sbjct: 317 IKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGS 376

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            N A EL   M   G + N+++Y+ LI+G CK  +I+ A  +     ++G++   VTY  
Sbjct: 377 FNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTV 436

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     +   +  A  LF+ M  +G   D   Y T I   C+   + E+ +LF     ++
Sbjct: 437 MITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIE 496

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                ++Y+ +I G CK G+   A  +F  + +    AD +TY  +I  LC + ++++A 
Sbjct: 497 LVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEAR 556

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L+  M  K + P  V   TL     R  +    V +L R+D+R 
Sbjct: 557 ALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRR 601



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 211/406 (51%), Gaps = 16/406 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++ A G +PNV T+++LINGLC+ G T  A  LF ++I  +       KP+  
Sbjct: 273 QAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSY-----KPNVH 327

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G CKEG + +A+ LL +M ++ + P+  TY ++I G C     N A  L  +M
Sbjct: 328 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKM 387

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QPN+ T++ ++D LCK GK++EA ++L +    G++ +   Y  ++   C  G +
Sbjct: 388 RREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHI 447

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M   GC  ++ +Y+ LI  YC+ +++E +  L+ + L+  + PT  TY ++
Sbjct: 448 TYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSM 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL---RI 298
             G  ++ +   A ++F+ M ++G  AD+  Y   I GLCK   + EA  L+  +   R+
Sbjct: 508 IAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRL 567

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           + CE+   +   L    C+  +  +A  +   L +        T N+++  L A G ++ 
Sbjct: 568 VPCEV---TPVTLAFEYCRREKAVVAVSILDRLDKR---RKNHTVNVLVRKLSAIGHVED 621

Query: 359 AHDLFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A  LFL       +A D +A+ + +  C  N + +   E+  ++  
Sbjct: 622 A-SLFLKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKISS 666


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 207/403 (51%), Gaps = 8/403 (1%)

Query: 1   MEAAALFTKLKAFGCEPNV--ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           ++ AA   K  A  C  +V  ++ S +++G C++G    A  L +EM       GV  K 
Sbjct: 123 LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEM----PRHGV--KV 176

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A+ Y +++D   +E   D+  E+L  M+++ I P V TY  ++ G   A D  + + +F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  +S +++  C+ G +  AS++ +  +  G+ PN   Y  L++GFC  
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A+ L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+  V TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  + +Y+ ++DG  K G ++ A    + + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDV 476

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF +M+ +G  P+ VA+  L+ G  +   + +  +L   M
Sbjct: 477 ALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 519



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 177/344 (51%), Gaps = 6/344 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP V TY+ L++GL           +FEEM + N         D   Y+++I+  C+ 
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFYSSVINAYCRA 261

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A E+  +     I P+  TY ++I GFC       A+ L  +M  +GV  N + F
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C+   +++A ++  +M ++G+  + + YNTL  G     R++ AK L   M  
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + N  SY+ LI+ +C   ++  A  L+ EM   G +P++VTYN +  G  +   +  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +  +EM++ G+  D ++Y   + G C NG +  AL LF  ++    + ++ +Y+ LI 
Sbjct: 442 AERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALIS 501

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 502 GLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 3/350 (0%)

Query: 58  PDAVI---YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           PD+V     + ++DG CK G V  A++LL +M    +  + + YNS++  +    D +  
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             +   M ++G++P V T+++++D L     + +   + E M    +  + + Y+++++ 
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  G V RA E+F      G + N  +Y  LING+CK  ++E A  L ++M  +G+   
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            + +NT+  G    + V++A ++   M++ G+  D + Y T   GL +   + EA  L R
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       +  SY+ LI   C  G +  A  LF  +        +VTYN+M+      G
Sbjct: 378 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 437

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +A     +ME KG+ PD  ++  L+ G   N +    + L   M +R
Sbjct: 438 SIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 5/334 (1%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNS---VIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           G +D A +LL Q       PD VT  S   V+ G+C +     A++L  EM   GV+ N 
Sbjct: 121 GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           + ++ ++D   +    +  +++L++M   G+ P    Y  L+DG      + + + +F  
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+S     +V+ YS +IN YC+   +  A  ++ E +  GI+P   TY  L  G  +I Q
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E A  L  +MQ  GV  +   + T IDG C+   + +ALE+   +  +  ELD+ +Y+ 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L  GL ++ R+  A  L   +    +  + V+Y  +I   C +G M +A  LF +M   G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P  V +N +M G I+     +     + M+++
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKK 452



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%)

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           S S ++DG CKSGR+  A +L   +PR  +  + + YN ++ A   +   D+  ++   M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           E +G+ P    +  L+ G     + +KV  +   M  +N
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 186/363 (51%), Gaps = 8/363 (2%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           AAL   +K  G   + I ++ L+ GLC    T  A+++    +   G     C P+   Y
Sbjct: 112 AALGNVIKK-GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG-----CIPNVFSY 165

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDK--NINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             ++ GLC E    +A ELL  M D   +  PDVV+Y +VI GF    D ++A   + EM
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PNVVT+S I+  LCK   M++A ++L  M++ GV PN   YN+++ G+C +G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KP + TY TL
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      +     L D M R+G+  + + +   I    K G + +A+ +F  +R    
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y  +I  LCKSGR++ A   F  +    L    + YN +IH+LC   K DKA D
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKD 465

Query: 362 LFL 364
            FL
Sbjct: 466 YFL 468



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 180/369 (48%), Gaps = 9/369 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+ TY  LI   C  G   +       +I     F V    DA+ +T ++ GLC +   
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKG--FRV----DAIAFTPLLKGLCADKRT 142

Query: 77  DKAKELLLQ-MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG--VQPNVVTF 133
             A +++L+ M      P+V +YN +++G C  N S EA  L   M D G    P+VV++
Sbjct: 143 SDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY 202

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + +++   K G +++A      M+  G+ PN   Y++++   C    +++A E+  SM  
Sbjct: 203 TTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK 262

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   N  +Y+ +++GYC + + + A+    +M S G++P VVTYN+L   L +  +   
Sbjct: 263 NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K+FD M + G+  +   Y T + G    G +VE   L   +       +   +S LI 
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              K G++  A  +F  + +  L  D VTY  +I  LC  G+++ A   F  M  + ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 374 DCVAFNTLM 382
             + +N+L+
Sbjct: 443 GNIVYNSLI 451



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 158/317 (49%), Gaps = 3/317 (0%)

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
           + P++ TY  +I   C A   +        ++ +G + + + F+ ++  LC + +  +A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 151 QL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYSILI 207
            + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG+ K  +++ A   Y EML +GI P VVTY+++   L +   +++A ++   M ++GV 
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            +   Y + + G C +G   EA+   + +     E D+ +Y+ L+D LCK+GR   A ++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
           F S+ +  L  ++ TY  ++      G + + H L   M   G+ P+   F+ L+    +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 388 NNETSKVVELLHRMDER 404
             +  + + +  +M ++
Sbjct: 387 QGKVDQAMLVFSKMRQQ 403



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 167/351 (47%), Gaps = 4/351 (1%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  +I   C  G +D     L  +  K    D + +  +++G C    +++A  +
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 118 FIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG--VRPNAFVYNTLMDG 174
            +  M Q G  PNV ++++++  LC   + +EA +LL++M   G    P+   Y T+++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           F   G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
             TYN++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F 
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
           ++     + +I +Y  L+ G    G L     L   + R  +  +   ++I+I A    G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM-DER 404
           K+D+A  +F  M  +G+ PD V + T++    ++      +    +M DER
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 6/188 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA     K+ + G EP+V+TY++L++ LC+ G    A  +F+ M           KP+  
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T++ G   +G + +   LL  M    I+P+   ++ +I  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ VT+  ++  LCK+G++E+A +  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAKELFV 189
           ++AK+ F+
Sbjct: 461 DKAKDYFL 468



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 6/210 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T +   G  PN  TY+++++G C +G    A+   ++M +   E      PD V
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVE------PDVV 305

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++D LCK G   +A+++   M  + + P++ TY ++++G+       E   L   M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN   FS+++    K GK+++A  +   M Q G+ P+   Y T++   C +GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYC 211
             A   F  M           Y+ LI+  C
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PN   +S LI    + G    A+ +F +M            PD V Y T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           G V+ A     QM D+ ++P  + YNS+I   C  +  ++AK  F++
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 209/461 (45%), Gaps = 69/461 (14%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A++  LK  G  PN  TY   I  LCR G+   A+++F EM     E GV   P+AV 
Sbjct: 211 AVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM----EEAGV--NPNAVT 264

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            +T I+GLC     D   E L  ++  N   D   Y +VIRGFC      EA+ +FI+M+
Sbjct: 265 CSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMV 324

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN----------------AF 166
           ++G+ P+   +  ++   CK G + +A  L   M+  G++ N                  
Sbjct: 325 NEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEV 384

Query: 167 VYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +YN ++D  C  G+V  A EL   M+      +V  Y+ LI GYC   ++  A +++ EM
Sbjct: 385 LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEM 444

Query: 227 LSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             +GI+P +VTYN L  G       + A +L D +   G+  ++  +   I+GLC  G +
Sbjct: 445 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKV 504

Query: 287 VEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR------------- 333
            EA     TL   KC   + +YS ++DG CK+   + A+ELF  L +             
Sbjct: 505 KEAEAFLNTLED-KC---LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEP 560

Query: 334 -----GVLIA-------------------------DVVTYNIMIHALCADGKMDKAHDLF 363
                G LI                          DV+TY +MI+  C    + +A D+F
Sbjct: 561 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 620

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            DM+ +G+ PD + +  ++ G  + N     + L   M  R
Sbjct: 621 NDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIAR 661



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 203/394 (51%), Gaps = 28/394 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---- 57
           EA  +F  +   G  P+   Y  LI+  C+ G+ + A+ L  +M++   +  +V +    
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEF 374

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                  D V+Y  ++D LCK G V++A ELL +MK + ++ DVV Y ++I G+C     
Sbjct: 375 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 434

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            +AK +F EM ++G++P++VT+++++    +NG  +EA +LL+ +   G++PN+  +N +
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 494

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G C+ G+V  A+    ++E   C  N   YS +++GYCK      A  L+S +  +GI
Sbjct: 495 IEGLCMAGKVKEAEAFLNTLED-KCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGI 550

Query: 232 --------KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                   +P  + Y  L         ++RA  +FD +   G+  D   Y   I+G C+ 
Sbjct: 551 LRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 610

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + EA ++F  ++    + D+ +Y+ ++DG  K+  L+ A  L+  +    L  D+VTY
Sbjct: 611 NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTY 670

Query: 344 NIMIHALCA------DGKMDKAHDLFLDMEAKGV 371
             ++   C       D +  +   LF+  + +GV
Sbjct: 671 TALLPGKCNFGSRHFDNQWLEEPKLFILAQPRGV 704



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 164/298 (55%), Gaps = 32/298 (10%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +F ++K  G EP+++TY+ L+ G  R G    AL    E+++  G  G+  KP++
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEAL----ELLDCIGTQGL--KPNS 488

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  II+GLC  G V +A+  L  ++DK +      Y++++ G+C AN + +A  LF  
Sbjct: 489 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSR 544

Query: 121 MMDQG--------VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +  QG        V+PN + +  ++   C++G M+ A  + +++++ G+ P+   Y  ++
Sbjct: 545 LSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 604

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G+C    +  A+++F  M+  G K +V +Y+++++G+ K   ++ A++LY EM+++G++
Sbjct: 605 NGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQ 664

Query: 233 PTVVTYNTLFIGL-------FEIHQVERAFKLFDEMQRHGVAADT----W--AYRTFI 277
           P +VTY  L  G        F+   +E   KLF   Q  GV  +     W  A++ FI
Sbjct: 665 PDIVTYTALLPGKCNFGSRHFDNQWLEEP-KLFILAQPRGVRLEEMGALWRDAWKPFI 721



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 207/476 (43%), Gaps = 81/476 (17%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRT---------------------GHTIVAL-- 39
           A + FT+LK  G + NV TY+ LI  LCR                      G  I AL  
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 40  -------------------------------NLFEEMING---NGEFGVVCKPDAVIYTT 65
                                           +F+E I+        G V  P  +    
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFV--PHIMSCNF 197

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++ L + G +D A  +   +K   +NP+  TY   I+  C   +  EA  +F EM + G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN VT S  ++ LC + + +   + L  +       + F Y  ++ GFC   ++  A+
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAE 317

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT-------- 237
           ++F+ M + G   + + Y  LI+ YCK   +  A++L+++M+S GIK  +V         
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDS 377

Query: 238 --------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
                   YN +   L ++ +VE A +L +EM+   ++ D   Y T I G C  G +V+A
Sbjct: 378 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA 437

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
             +F  ++    E DI +Y+ L+ G  ++G  K A EL   +    L  +  T+N +I  
Sbjct: 438 KNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEG 497

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVA-FNTLMLGCIRNNETSKVVELLHRMDER 404
           LC  GK+ +A      +E K     C+  ++ ++ G  + N T K  EL  R+ ++
Sbjct: 498 LCMAGKVKEAEAFLNTLEDK-----CLENYSAMVDGYCKANFTRKAYELFSRLSKQ 548



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 23/238 (9%)

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           + L    N A   F  ++  G +HNV +Y+ LI   C+ +      SL SE++  G K +
Sbjct: 71  YNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKES 128

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE-LF 293
           V+ ++     LF++ +        +      +  D       +    + G   EA++ LF
Sbjct: 129 VLGFD--ITALFDVLREGGGEVEGEHSSVLILVLDM-----LVKAYVRVGMFDEAIDALF 181

Query: 294 RTLR------ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           +T R      I+ C         L++ L + G++ +A  ++  L R  L  +  TY I I
Sbjct: 182 QTKRRGFVPHIMSCNF-------LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFI 234

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            ALC  G  ++A D+F +ME  GV P+ V  +T + G   +  +    E L  +   N
Sbjct: 235 KALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 203/413 (49%), Gaps = 36/413 (8%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGH----TIVALNL--------------FEE 44
           A  +   +  FGCEP+VI+Y++LI+G CR G     ++V  +L              F  
Sbjct: 75  AEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNS 134

Query: 45  MINGNGEFGVV-------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
           + NG  +  ++             C P+ V Y+T ID  CK G +  A +    MK   +
Sbjct: 135 LFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL 194

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
           +P+VVT+  +I G+C A D   A  L+ EM    +  NVVT++ ++D  CK G+M+ A +
Sbjct: 195 SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE 254

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +   M++  V PN+ VY T++DGF   G  + A +    M + G + ++ +Y ++I+G C
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            N +++ A  +  +M    + P +V + T+    F+  +++ A  ++ ++   G   D  
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           A  T IDG+ KNG + EA+  F     ++   D+  Y+ LID LCK G       LF  +
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYF----CIEKANDVM-YTVLIDALCKEGDFIEVERLFSKI 429

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
               L+ D   Y   I  LC  G +  A  L   M  +G+  D +A+ TL+ G
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 197/365 (53%), Gaps = 11/365 (3%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           F  +K     PNV+T++ LI+G C+ G   VA++L++EM        V    + V YT +
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR------VRMSLNVVTYTAL 239

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           IDG CK+G + +A+E+  +M +  + P+ + Y ++I GF    DS+ A +   +M++QG+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           + ++  + VI+  LC NGK++EA++++E M +  + P+  ++ T+M+ +  +GR+  A  
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           ++  +   G + +V + S +I+G  KN ++  A+  +        K   V Y  L   L 
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDALC 414

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +        +LF ++   G+  D + Y ++I GLCK G +V+A +L   +      LD+ 
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ LI GL   G +  A ++F  +    +  D   ++++I A   +G M  A DL LDM
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534

Query: 367 EAKGV 371
           + +G+
Sbjct: 535 QRRGL 539



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 199/398 (50%), Gaps = 12/398 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    ++L+     P+  T +  I+ L  +   I++L     +++          P   
Sbjct: 4   EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRG------YTPHRS 57

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +++  +CK G V  A++++  M      PDV++YNS+I G C   D   A  L +E 
Sbjct: 58  SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVLES 116

Query: 122 MDQG----VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +        +P++V+F+ + +   K   ++E    + +M++    PN   Y+T +D FC 
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCK 175

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G +  A + F SM+      NV +++ LI+GYCK  ++E A+SLY EM    +   VVT
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G  +  +++RA +++  M    V  ++  Y T IDG  + G    A++    + 
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LDI +Y  +I GLC +G+LK A E+   + +  L+ D+V +  M++A    G+M 
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVV 395
            A +++  +  +G  PD VA +T++ G  +N +  + +
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 8/329 (2%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           + L  +  +   P   ++NSV+   C       A+ +   M   G +P+V++++ ++D  
Sbjct: 42  KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101

Query: 141 CKNGKMEEASQLLE-LMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM--G 195
           C+NG +  AS +LE L    G   +P+   +N+L +GF    ++    E+FV M  M   
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVMLKC 158

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  NV +YS  I+ +CK+ E++ AL  +  M    + P VVT+  L  G  +   +E A 
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            L+ EM+R  ++ +   Y   IDG CK G +  A E++  +   + E +   Y+ +IDG 
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            + G    A +    +    +  D+  Y ++I  LC +GK+ +A ++  DME   + PD 
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V F T+M    ++      V + H++ ER
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIER 367



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 36/295 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +++++     EPN + Y+T+I+G  + G +  A+    +M+N         + D  
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG------MRLDIT 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  II GLC  G + +A E++  M+  ++ PD+V + +++  +  +     A  ++ ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364

Query: 122 MDQGVQPNVVT------------------------------FSVIMDELCKNGKMEEASQ 151
           +++G +P+VV                               ++V++D LCK G   E  +
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVER 424

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           L   + + G+ P+ F+Y + + G C  G +  A +L   M   G   ++ +Y+ LI G  
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
               +  A  ++ EML+ GI P    ++ L     +   +  A  L  +MQR G+
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 11/234 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++     P+++ ++T++N   ++G    A+N++ ++I    E      PD V
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE------PDVV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             +T+IDG+ K G + +A       K  +     V Y  +I   C   D  E +RLF ++
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKI 429

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+   ++  +  LCK G + +A +L   M+Q G+  +   Y TL+ G    G +
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLM 489

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
             A+++F  M + G   +   + +LI  Y K   +  A  L  +M  +G+   V
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 6/126 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   LF+K+   G  P+   Y++ I GLC+ G+ + A  L   M+    + G++   D 
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV----QEGLLL--DL 473

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YTT+I GL  +G + +A+++  +M +  I+PD   ++ +IR +    +   A  L ++
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533

Query: 121 MMDQGV 126
           M  +G+
Sbjct: 534 MQRRGL 539


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 215/400 (53%), Gaps = 15/400 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +    C P+ +T++T+I+ LC  G    A+ + E+M     ++G  CKPD  
Sbjct: 323 DAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQM----PKYG--CKPDNF 376

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +++ L + G VD A ELL  +  K   P+ V Y SV++G C A+  ++  +L  EM
Sbjct: 377 TYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEM 433

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   +  + VTF +I+D LC+ G ++  +++L  M + G  P+  +YN+L++GF   G V
Sbjct: 434 IRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSV 493

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ELF   ++M CK NV +Y+ ++ G C+ ++ E A  L +EM+     P  VT++TL
Sbjct: 494 DDALELF---KNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +   VE A ++F++M ++    +   Y T I+GL     + +AL+L   L  + C
Sbjct: 551 ISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL---LNDMPC 607

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D   YS  + GLC++ R + A EL   + R   + D VT++I+I+ LC  G ++ A +
Sbjct: 608 KPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATE 667

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   M      P+   +++L+ G          ++LL  M
Sbjct: 668 VSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM 707



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 196/389 (50%), Gaps = 16/389 (4%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           + +T +TL+ G CR G  +      E M+       +    D V Y T++ G C+EG ++
Sbjct: 135 DAVTRNTLVAGYCRAGGRLADA---ERML---ASLALSGSADVVTYNTLVAGYCREGRLN 188

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A+ L+  M      P+  T +++++G C   + ++A+ L  EM+  G  PN +TF +I+
Sbjct: 189 DARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMII 245

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC+NG  + A  +L+ M +        VYN ++      GRV  A  LF   + M CK
Sbjct: 246 HSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLF---DQMPCK 302

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            ++FSY+ ++ G C++   E A +L + M+ K   P  VT+NT+   L     V+ A ++
Sbjct: 303 PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEV 362

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            ++M ++G   D + Y   ++ L + G + +ALEL RT   +  + +   Y  ++ GLC+
Sbjct: 363 VEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRT---IPWKPNTVCYRSVLKGLCR 419

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           + R     +L   + R  L  D VT+ ++I  LC  G +D   ++  +M   G +PD + 
Sbjct: 420 ADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIII 479

Query: 378 FNTLMLGCIRNNETSKVVELLHRMD-ERN 405
           +N+L+ G   N      +EL   M  +RN
Sbjct: 480 YNSLINGFSENGSVDDALELFKNMSCKRN 508



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 192/424 (45%), Gaps = 44/424 (10%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L+    +PN + Y +++ GLCR         L  EMI            D V +  IID 
Sbjct: 398 LRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNL------DEVTFGLIIDC 451

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC++G VD   E+L +M     +PD++ YNS+I GF      ++A  LF  M     + N
Sbjct: 452 LCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRN 508

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVT++ ++  LC+  + E+A +L+  M++    PN   ++TL+   C  G V  A E+F 
Sbjct: 509 VVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFE 568

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M    C  NV  YS LING    + ++ AL L ++M     KP  + Y+    GL    
Sbjct: 569 KMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRAE 625

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL----------------- 292
           + E A +L  EM R     D   +   I+ LC  G++  A E+                 
Sbjct: 626 RWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYS 685

Query: 293 ---------------FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
                           + LR + CE D   YS  + GLC++ R + A EL   + R    
Sbjct: 686 SLINGFAEQYRAEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCP 745

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D  T++++I +LC +G +D A ++F  M   G +P+    ++L+ G        + ++L
Sbjct: 746 LDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKL 805

Query: 398 LHRM 401
           L  M
Sbjct: 806 LSSM 809



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 183/389 (47%), Gaps = 15/389 (3%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN  T STL+ GLC       A  L  EMI         C P+ + +  II  LC+ G  
Sbjct: 201 PNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSG------CPPNDLTFGMIIHSLCQNGLA 254

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A  +L QM        V+ YN +I          EA  LF +M     +P++ +++ +
Sbjct: 255 DRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTV 311

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           M  LC++G+ E+A  L+  M++    P+   +NT++   C  G V+ A E+   M   GC
Sbjct: 312 MKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGC 371

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K + F+YS L+N   +   ++ AL L   + +   KP  V Y ++  GL    + +   K
Sbjct: 372 KPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNTVCYRSVLKGLCRADRWDDVGK 428

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L  EM R+ +  D   +   ID LC+ G +    E+ R +    C  DI  Y+ LI+G  
Sbjct: 429 LVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFS 488

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           ++G +  A ELF ++       +VVTYN M+  LC   + + A  L  +M      P+ V
Sbjct: 489 ENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEV 545

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDERN 405
            F+TL+    +       +E+  +M + N
Sbjct: 546 TFSTLISYLCQKGFVECAIEVFEKMPKYN 574



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 196/442 (44%), Gaps = 70/442 (15%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  L +++   GC PN +T+  +I+ LC+ G    A+ + ++M       GV+      
Sbjct: 221 DAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEII 280

Query: 56  --------------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDV 95
                               CKPD   Y T++ GLC++G  + A  L+  M  K+  PD 
Sbjct: 281 SCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDE 340

Query: 96  VTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLEL 155
           VT+N+VI   C+    + A  +  +M   G +P+  T+S +++ L + G +++A   LEL
Sbjct: 341 VTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDA---LEL 397

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGR----------------------------------- 180
           +  I  +PN   Y +++ G C   R                                   
Sbjct: 398 LRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGL 457

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+   E+   M   GC  ++  Y+ LING+ +N  ++ AL L+  M     K  VVTYN 
Sbjct: 458 VDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNY 514

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL    Q E A KL  EM +     +   + T I  LC+ G++  A+E+F  +    
Sbjct: 515 MLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYN 574

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++  YS LI+GL     +  A +L + +P      D + Y+  +  LC   + + A 
Sbjct: 575 CMPNVIIYSTLINGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAG 631

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
           +L L+M  K   PD V F+ L+
Sbjct: 632 ELILEMIRKNCLPDEVTFSILI 653



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 161/295 (54%), Gaps = 12/295 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++    C PN +T+STLI+ LC+ G    A+ +FE+M   N      C P+ +
Sbjct: 527 DAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYN------CMPNVI 580

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY+T+I+GL  +  VD A +LL  M  K   PD + Y++ ++G C A    +A  L +EM
Sbjct: 581 IYSTLINGLSDQECVDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAGELILEM 637

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P+ VTFS++++ LC  G +E A+++ ELM++    PN F+Y++L++GF    R 
Sbjct: 638 IRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRA 697

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   + +M C+ +   YS  + G C+ K  E A  L +EM  K       T++ L
Sbjct: 698 EDALQL---LRNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSML 754

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
              L +   V+ A ++F++M  +G + +   + + ++G  +   + E L+L  ++
Sbjct: 755 IGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 12/323 (3%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
            K   C+ NV+TY+ ++ GLCR      A  L  EM+         C P+ V ++T+I  
Sbjct: 500 FKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDE------CLPNEVTFSTLISY 553

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC++GFV+ A E+  +M   N  P+V+ Y+++I G       ++A +L   + D   +P+
Sbjct: 554 LCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL---LNDMPCKPD 610

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            + +S  +  LC+  + E+A +L+  MI+    P+   ++ L++  C  G +  A E+  
Sbjct: 611 TICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSE 670

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M    C  NVF YS LING+ +    E AL L   M     +P  + Y+    GL    
Sbjct: 671 LMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAK 727

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           + E A +L  EM R     D   +   I  LC+NG +  A E+F  + +  C  + + +S
Sbjct: 728 RWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHS 787

Query: 310 CLIDGLCKSGRLKIAWELFHSLP 332
            L++G  +  R+    +L  S+P
Sbjct: 788 SLVNGYSEQRRVDEGLKLLSSMP 810



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 6/180 (3%)

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-N 283
           E +    +P  V    L   L    +++ A ++    +R G A D     T + G C+  
Sbjct: 92  ESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTA-DAVTRNTLVAGYCRAG 150

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G + +A  +  +L  L    D+ +Y+ L+ G C+ GRL  A  L   +P      +  T 
Sbjct: 151 GRLADAERMLASL-ALSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTN 206

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++  LC++ + D A +L  +M   G  P+ + F  ++    +N    + + +L +M +
Sbjct: 207 STLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSK 266


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 7/345 (2%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           + V Y  ++ G CK G   +A ELL +MK   + P+VV + ++IRG C A   ++A  L 
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLH 87

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
              + +   PNV T+S+++D LCK+G+  EA  L+  M++ G  PN   YN L+DGF   
Sbjct: 88  FRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            R++    L   M   GC+ +V +Y+++++ +CKN  I+ A  L + +     K  VVTY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTY 203

Query: 239 NTLFIGL--FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           N+LF  L   E  +   A  L ++M + G   +   YRT +  LCKN  + EA ++  ++
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C+ D  SY  L+     +GR   + EL   +     I D  T N++IH  C  G +
Sbjct: 264 YSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +AH LF  M  +G  P  V +NTL+    +  +    V+LLH+M
Sbjct: 324 HEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 187/386 (48%), Gaps = 15/386 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K+ G  PNV+ ++T+I GLC  G    AL  F  +       G  C P+  
Sbjct: 48  QALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI-------GEDCAPNVY 100

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ ++D LCK G   +A  L+ +M  K  +P+VVTYN++I GF      +E   L  EM
Sbjct: 101 TYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +V+T+++I+D  CKN  ++EA +LL  +     + N   YN+L      T   
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNAL----EKRNVVTYNSLFTALS-TAEG 215

Query: 182 NRAKELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +R  E    +E M   G + N  +Y  ++   CKN  ++ A  +   M S+G K   V+Y
Sbjct: 216 DRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSY 275

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L +      +   + +L   M   G   DT      I   CK G + EA +LF+++  
Sbjct: 276 KILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQ 335

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ LI   CK+ +   A +L H + +     +V+TYN +I + C + + ++
Sbjct: 336 RGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEE 395

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG 384
           A  +F  M   G  PD V++ TL + 
Sbjct: 396 ARGIFQMMVDSGCFPDRVSYTTLKIS 421



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 3/171 (1%)

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V+Y  L  G  +  + ++A +L DEM+ +GV  +   + T I GLC  G + +AL  FR 
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFR- 89

Query: 296 LRILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            RI + C  ++ +YS L+D LCKSG+   A+ L   + +     +VVTYN +I       
Sbjct: 90  -RIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLE 148

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++D+   L  +M  +G   D + +  ++    +NN   +   LL+ +++RN
Sbjct: 149 RLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRN 199



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)

Query: 260 EMQRH----GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           E  RH      A +  +Y   + G CK G   +ALEL   ++      ++  ++ +I GL
Sbjct: 16  EFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGL 75

Query: 316 CKSGRLKIAWELFHSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           C +G  K++  L H    G   A +V TY+I++ ALC  G+  +A+ L  +M  KG +P+
Sbjct: 76  CTAG--KVSQALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPN 133

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            V +N L+ G  +     +V+ LL  M +R
Sbjct: 134 VVTYNALIDGFRKLERLDEVLMLLKEMSQR 163


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 200/404 (49%), Gaps = 6/404 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E A+   ++     EP+V  Y+ +I+G C+      A  +   M    G       PD 
Sbjct: 119 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRM-KARGFL-----PDI 172

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LC    +  A ++L Q+   N  P V+TY  +I         NEA +L  E
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P++ T++ I+  +CK G +E A++L+  +   G +P+   YN L+  F   G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +  ++L   M S GC+ N  +YSILI+  C+   I+ A+S+   M+ K + P   +Y+ 
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L   L +  +++ A  + D M  +G   D   Y T +  LCKNG   +ALE+F  LR + 
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  ++ SY+ +I  L   G    A  +  ++    +  D +TYN +I  LC DG +++A 
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L  DME  G  P  +++N ++LG  +       + +   M E+
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEK 516



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 197/390 (50%), Gaps = 7/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+VI  + LI G     +   A  + E ++  + E      PD   Y  +I G CK 
Sbjct: 98  GYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESHTE------PDVFAYNAVISGFCKV 150

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             ++ A ++L +MK +   PD+VTYN +I   C       A ++  +++     P V+T+
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++     G + EA +LLE M+  G+ P+ + YN ++ G C  G V RA EL  S+ S
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GCK +V SY+IL+  +    + +    L +EM S+G +P  VTY+ L   L    +++ 
Sbjct: 271 KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDE 330

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M    +  DT++Y   I  LCK G +  A+ +   +    C  DI +Y+ ++ 
Sbjct: 331 AISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 390

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK+G    A E+F+ L       +V +YN MI AL + G   +A  +   M +KGV P
Sbjct: 391 ALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDP 450

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D + +N+L+    R+    + + LL  M++
Sbjct: 451 DEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 181/348 (52%), Gaps = 6/348 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P VITY+ LI      G    A+ L EEM+      G++  PD   Y  II G+CKEG
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEML----ARGLL--PDMYTYNAIIRGMCKEG 256

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V++A EL+  +  K   PDV++YN ++R F      +E ++L  EM  +G +PN VT+S
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           +++  LC+ G+++EA  +L++MI+  + P+ + Y+ L+   C  GR++ A  +   M S 
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CKN     AL +++++   G  P V +YNT+   L+      RA
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             +   M   GV  D   Y + I  LC++G + EA+ L   +        + SY+ ++ G
Sbjct: 437 LGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LCK  R+  A  +F  +       +  TY ++I  +   G   +A +L
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +  ++KA G  P+++TY+ +I  LC      +AL + ++++  N      C P  + 
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN------CMPTVIT 209

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YT +I+    EG +++A +LL +M  + + PD+ TYN++IRG C       A  L   + 
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+V+++++++      GK +E  +L+  M   G  PN   Y+ L+   C  GR++
Sbjct: 270 SKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 329

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  +   M       + +SY  LI+  CK   ++ A+ +   M+S G  P +V YNT+ 
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 389

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L +     +A ++F++++  G   +  +Y T I  L   G    AL +   +     +
Sbjct: 390 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVD 449

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ LI  LC+ G ++ A  L   + +      V++YNI++  LC   ++D A  +
Sbjct: 450 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGM 509

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           F +M  KG  P+   +  L+ G       ++ +EL + +  R+
Sbjct: 510 FAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 552



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 171/339 (50%), Gaps = 7/339 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ A G  P++ TY+ +I G+C+ G    A  L   + +        CKPD +
Sbjct: 225 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG------CKPDVI 278

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++     +G  D+ ++L+ +M  +   P+ VTY+ +I   C     +EA  +   M
Sbjct: 279 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 338

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+  ++  ++  LCK G+++ A  +++ MI  G  P+   YNT++   C  G  
Sbjct: 339 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 398

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A E+F  +  MGC  NV SY+ +I+      +   AL +   M+SKG+ P  +TYN+L
Sbjct: 399 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSL 458

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     VE A  L D+M++ G      +Y   + GLCK   I +A+ +F  +    C
Sbjct: 459 ISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGC 518

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIAD 339
             +  +Y  LI+G+  +G    A EL +SL  R V+  D
Sbjct: 519 RPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQD 557



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 1/269 (0%)

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++  CK GK  E+   LE ++  G  P+  +   L+ GF     + +A  +   +ES  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            + +VF+Y+ +I+G+CK   IE A  + + M ++G  P +VTYN +   L    ++  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           K+ D++           Y   I+     G I EA++L   +       D+ +Y+ +I G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK G ++ A EL  SL       DV++YNI++ A    GK D+   L  +M ++G  P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V ++ L+    R     + + +L  M E+
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEK 341


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           + V Y  ++ G CK G   +A ELL +MK   + P+VV + ++IRG C A   ++A  L 
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLH 87

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
              + +   PNV T+S ++D LCK+G+  EA  L+  M++ G  PN   YN L+DGF   
Sbjct: 88  FRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            R++    L   M   GC+ +V +Y+++++ +CKN  I+ A  L + +     K  VVTY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTY 203

Query: 239 NTLFIGL--FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           N+LF  L   E  +   A  L ++M + G   +   YRT +  LCKN  + EA ++  ++
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C+ D  SY  L+     +GR   + EL   +     I D  T N++IH  C  G +
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +AH LF  M  +G  P  V +NTL+    +  +    V+LLH+M
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 188/386 (48%), Gaps = 15/386 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++K+ G  PNV+ ++T+I GLC  G    AL  F  +       G  C P+  
Sbjct: 48  QALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRI-------GEDCAPNVY 100

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T++D LCK G   +A  L+ +M  K  +P+VVTYN++I GF      +E   L  EM
Sbjct: 101 TYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEM 160

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +V+T+++I+D  CKN  ++EA +LL  +     + N   YN+L      T   
Sbjct: 161 SQRGCRADVITYTMILDIFCKNNSIDEAYRLLNAL----EKRNVVTYNSLFTALS-TAEG 215

Query: 182 NRAKELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +R  E    +E M   G + N  +Y  ++   CKN  ++ A  +   M S+G K   V+Y
Sbjct: 216 DRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSY 275

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
             L +      +   + +L   M   G   DT      I   CK G + EA +LF+++  
Sbjct: 276 KILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQ 335

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ LI   CK+ +   A +L H + +     +V+TYN +I + C + + ++
Sbjct: 336 RGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEE 395

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG 384
           A  +F  M   G  PD V++ TL L 
Sbjct: 396 ARGIFQMMVDNGCFPDRVSYTTLKLS 421



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 3/171 (1%)

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V+Y  L  G  +  + ++A +L DEM+ +GV  +   + T I GLC  G + +AL  FR 
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFR- 89

Query: 296 LRILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            RI + C  ++ +YS L+D LCKSG+   A+ L   + +     +VVTYN +I       
Sbjct: 90  -RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLE 148

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++D+   L  +M  +G   D + +  ++    +NN   +   LL+ +++RN
Sbjct: 149 RLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRN 199


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 207/404 (51%), Gaps = 12/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F   +  G  PN+ TY+ LI   CR      A    +E++N   E G    PD  
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA----KELLNWMWEQGF--SPDVF 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+ L K G++  A +L  +M ++ + PDV  YN +I GF    D   A  ++  +
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +    V PN+ +++V+++ LCK GK +E+ ++   M +     + + Y+TL+ G C +G 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  ++  M   G   +V  Y+ ++NGY +   IE  L L+  M  +G + TVV+YN 
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE  +V+ A  +++ +      AD+  Y   + GLCKNGY+ +AL +       +
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +YS +I+GLC+ GRL     +   + +     +    N +I+      K++ A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK----VVELLHR 400
             F +M +KG  P  V +NTL+ G  +    S+    V E+LH+
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 206/405 (50%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNL---FEEMINGNGEFGVVCK 57
           +A  +F ++ + FGC+P + +Y++L+N L  +     A +    FE M       G+   
Sbjct: 96  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM-------GL--S 146

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  +I   C++   DKAKELL  M ++  +PDV +Y ++I         ++A +L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFC 176
           F EM ++GV P+V  +++++D   K G +  AS++ E +++   V PN   YN +++G C
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+ + + E++  M+      ++++YS LI+G C +  ++GA  +Y EM   G+ P VV
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YNT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA+ ++  L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 385

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C  D  +Y  L+ GLCK+G L  A  +      G    D   Y+ MI+ LC +G++
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+   +   M   G  P+    N ++ G +R ++    +     M
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +   G  P+V +Y TLIN L + G+   AL LF+EM     E GV   PD  
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM----PERGVT--PDVA 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +IDG  K+G +  A E+  ++ K  ++ P++ +YN +I G C     +E+  ++  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       ++ T+S ++  LC +G ++ A+++ + M + GV P+  VYNT+++G+   GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +    EL+  ME  GC+  V SY+ILI G  +N +++ A+S++  +  K      +TY  
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +   + +A  + +E +      DT+AY + I+GLC+ G + E   +   +    
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ +    + +I+G  ++ +L+ A   F ++        VVTYN +I+ L    +  +A+
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            L  +M  KG  P+ + ++ LM G
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNG 543



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 192/377 (50%), Gaps = 11/377 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAVIYTTIID 68
           LK     PN+ +Y+ +INGLC+ G    +  ++  M  N  G+       D   Y+T+I 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-------DLYTYSTLIH 298

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
           GLC  G +D A  +  +M +  ++PDVV YN+++ G+  A    E   L+  M  +G + 
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR- 357

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
            VV++++++  L +N K++EA  + EL+ +     ++  Y  L+ G C  G +N+A  + 
Sbjct: 358 TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
              E+     + F+YS +ING C+   ++    +  +M   G KP     N +  G    
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            ++E A + F  M   G       Y T I+GL K     EA  L + +     + ++ +Y
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 309 SCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           S L++GLC+  +L +A  L+  +L +G    DV  +NI+IH LC+ GK++ A  L+ +M+
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 596

Query: 368 AKGVAPDCVAFNTLMLG 384
            +   P+ V  NTLM G
Sbjct: 597 QRKCVPNLVTHNTLMEG 613



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 197/379 (51%), Gaps = 7/379 (1%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELL 83
           T+I    +      AL++F+ M   +  FG  C+P    Y ++++ L +    D+A+   
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRM---HEIFG--CQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           L  +   ++P++ TYN +I+  C     ++AK L   M +QG  P+V ++  +++ L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFS 202
           G M +A +L + M + GV P+   YN L+DGF   G +  A E++   ++      N+ S
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+++ING CK  + + +  ++  M        + TY+TL  GL     ++ A +++ EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
            +GV+ D   Y T ++G  + G I E LEL++ +    C   + SY+ LI GL ++ ++ 
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 376

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  ++  LP     AD +TY +++H LC +G ++KA  +  + E      D  A+++++
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  R     +V  +L +M
Sbjct: 437 NGLCREGRLDEVAGVLDQM 455



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 198/384 (51%), Gaps = 7/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  ++ ++K      ++ TYSTLI+GLC +G+   A  +++EM     E GV   PD V
Sbjct: 273 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM----AENGV--SPDVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+++G  + G +++  EL   M+ +     VV+YN +IRG       +EA  ++  +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++    + +T+ V++  LCKNG + +A  +LE         + F Y+++++G C  GR+
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   M   GCK N    + +ING+ +  ++E AL  +  M+SKG  PTVVTYNTL
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A+ L  EM   G   +   Y   ++GLC+   +  AL L+        
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D++ ++ +I GLC SG+++ A +L+  + +   + ++VT+N ++         ++A  
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGC 385
           ++  +     + +C        GC
Sbjct: 626 IWDHILQSWSSSNCYYMEHTCQGC 649



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 149/278 (53%), Gaps = 3/278 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           P  V  +VI     KN   ++A  + + M +I G +P    YN+L++    + + + A+ 
Sbjct: 77  PEDVALTVI-KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            F+  E+MG   N+ +Y+ILI   C+ K+ + A  L + M  +G  P V +Y TL   L 
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDI 305
           +   +  A KLFDEM   GV  D   Y   IDG  K G I+ A E++ R L+      +I
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY+ +I+GLCK G+   ++E++H + +     D+ TY+ +IH LC  G +D A  ++ +
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M   GV+PD V +NT++ G +R     + +EL   M++
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 2/193 (1%)

Query: 214 KEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           K    ALS++  +    G   T   ++ +   LF+   V    ++ + ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 273 YRTFIDGLCKNGYIVEALELFRTLR-ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             T I    KN    +AL++F+ +  I  C+  IRSY+ L++ L +S +   A   F   
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L  ++ TYNI+I   C   + DKA +L   M  +G +PD  ++ TL+    +N   
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 392 SKVVELLHRMDER 404
           S  ++L   M ER
Sbjct: 201 SDALKLFDEMPER 213


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 184/335 (54%), Gaps = 8/335 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+V++Y+TLINGLC+ G    A +LF +M+   G     C+P+A  Y  ++DGLCK+  
Sbjct: 43  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG-----CRPNAFTYNALVDGLCKQDR 97

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A+ ++ + + ++  PDVVTYN+++         +EA   F +M ++G  P +V+F+ 
Sbjct: 98  LDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 157

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+  LC+  ++ +A ++   MI     PN   Y+ ++DG C + +++ A++L   M S G
Sbjct: 158 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ ++ +Y+ L+ G+     ++ AL L   M+S+G  P VVTY  +   L ++ +V+ A 
Sbjct: 218 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 277

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++F E+  +  + +   Y   I G C+   + E     + +R + C  ++ +Y+ +I GL
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEG---GKVMREMACRPNVVTYNTMIWGL 334

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
               R + A+ +F  +     + D  TY  +  AL
Sbjct: 335 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 186/369 (50%), Gaps = 9/369 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G + N  T S ++ GLCR G    AL  F+  +    E     +PD V YTT+I+GLCK 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASL----ELAHA-QPDVVSYTTLINGLCKL 59

Query: 74  GFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           G VD A +L  +M       P+  TYN+++ G C  +  + A+ +  E   +   P+VVT
Sbjct: 60  GRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVT 119

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ +M  L + G+++EA      M + G  P    +N ++ G C   R+  A E+F  M 
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
                 N+ +YS++I+G CK+ +++ A  L   M+S+G +P +V Y  L +G     +++
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A  L   M   G   D   Y   ID LCK G + +A E+FR L   KC  ++ +YS LI
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            G C++ R+    ++   +       +VVTYN MI  L    + ++A+ +F +M   G  
Sbjct: 300 GGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFV 356

Query: 373 PDCVAFNTL 381
           PD   +  L
Sbjct: 357 PDARTYRGL 365



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 160/307 (52%), Gaps = 10/307 (3%)

Query: 6   LFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           LF K+  A GC PN  TY+ L++GLC+      A  +  E      +F     PD V Y 
Sbjct: 68  LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEA--RKRDFA----PDVVTYN 121

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++  L + G VD+A     QM ++   P +V++N++I G C A    +A  +F EM+D+
Sbjct: 122 TLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 181

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              PN+VT+SV++D LCK+ +++EA QLL+ M+  G RP+   Y  L+ GF   GR++ A
Sbjct: 182 DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSA 241

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   M S GC  +V +Y+++I+  CK   ++ A  ++ E+++    P VVTY+ L  G
Sbjct: 242 LGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGG 301

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                +V+   K+  EM       +   Y T I GL       EA  +FR +       D
Sbjct: 302 YCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPD 358

Query: 305 IRSYSCL 311
            R+Y  L
Sbjct: 359 ARTYRGL 365



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 5/342 (1%)

Query: 64  TTIIDGLCKEGFVDKAKELL-LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + I+ GLC+ G V +A E     ++  +  PDVV+Y ++I G C     + A  LF +M+
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73

Query: 123 DQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             G  +PN  T++ ++D LCK  +++ A  ++    +    P+   YNTLM      GRV
Sbjct: 74  AAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRV 133

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A   F  M   G    + S++ +I G C+ + +  AL +++EM+ +   P +VTY+ +
Sbjct: 134 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 193

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  Q++ A +L D M   G   D  AY   + G    G +  AL L R +    C
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 253

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+ +ID LCK GR+  A E+F  L       +VVTY+ +I   C   ++D+   
Sbjct: 254 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 313

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  +M  +   P+ V +NT++ G    +   +   +   M E
Sbjct: 314 VMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 9/272 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A+  + +     P+V+TY+TL+  L + G    AL  F +M     E G V  P  V 
Sbjct: 101 ARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT----EEGYV--PTLVS 154

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  II GLC+   +  A E+  +M D++ +P++VTY+ VI G C ++  +EA++L   M+
Sbjct: 155 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 214

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++V ++ ++      G+++ A  LL  M+  G  P+   Y  ++D  C  GRV+
Sbjct: 215 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 274

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E+F  + +  C  NV +YS LI GYC+   ++    +  EM     +P VVTYNT+ 
Sbjct: 275 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMI 331

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            GL  + + E A+ +F EM   G   D   YR
Sbjct: 332 WGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 37/315 (11%)

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVN 182
           +G+Q N  T S+I+  LC+ G++ +A +  +  +++   +P+   Y TL++G C  GRV+
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 183 RAKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            A +LF  M  + GC+ N F+Y+ L++G CK   ++ A ++ +E   +   P VVTYNTL
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              LF++ +V+ A   F +M   G      ++   I GLC+   + +ALE+F  +     
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 302 ELDIRSYSCLIDGLCKS-----------------------------------GRLKIAWE 326
             ++ +YS +IDGLCKS                                   GRL  A  
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +     I DVVTY ++I  LC  G++D AH++F ++ A   +P+ V ++ L+ G  
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 387 RNNETSKVVELLHRM 401
           R +   +  +++  M
Sbjct: 304 RASRVDEGGKVMREM 318



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 19/259 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A FT++   G  P +++++ +I GLCR      AL +F EMI+ +        P+ V
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLV 188

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDGLCK   +D+A++LL +M  +   PD+V Y  ++ GF  A   + A  L   M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+VVT++V++D+LCK G++++A ++   ++     PN   Y+ L+ G+C   RV
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ++   M  M C+ NV +Y+ +I G       E A  ++ EM   G  P   TY  L
Sbjct: 309 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365

Query: 242 FIGLFEIHQVERAFKLFDE 260
                     +RA ++ D 
Sbjct: 366 ----------KRALRMIDH 374



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFD-EMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           +G++    T + +  GL    +V +A + FD  ++      D  +Y T I+GLCK G + 
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 288 EALELFRTLRILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
            A +LFR +     C  +  +Y+ L+DGLCK  RL  A  +     +     DVVTYN +
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 347 IHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           + AL   G++D+A   F  M  +G  P  V+FN ++ G  R    +  +E+ + M +R+
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 2/145 (1%)

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSG 319
           M   G+  +       + GLC+ G + +ALE F  +L +   + D+ SY+ LI+GLCK G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 320 RLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           R+  A++LF  +   G    +  TYN ++  LC   ++D A  +  +   +  APD V +
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           NTLM    +     + +    +M E
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTE 145


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 198/382 (51%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  LF ++K  G +P++ TY++L+ G C+ G    A+ L+ EM + G        KP+ 
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG-------FKPNV 471

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y T++ G   +   D A  LL +MK   ++ +  TYN +I G C  +   E   +   
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M +G  P ++T++ I++   K G M  A  + + M + G+ PN   Y + +DG+C TG 
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGC 591

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A ++   +   G + ++ +Y+ LING+C+   +  AL L   +L  G+ P  V YN+
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNS 651

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G   ++ ++   K ++ M + G+ ADT  Y T IDG  K+G +  ALEL+  +    
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +++ L  GLC+SG +  A +L   + R  +  +V  YN++I+    D K+ +A 
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAF 771

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L  +M   G+ PD   ++ L+
Sbjct: 772 RLHDEMLNMGIQPDDTTYDILV 793



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 217/478 (45%), Gaps = 84/478 (17%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +++  G + +VI  +TL+ G C       ALNLF+E +      G+V  P  V
Sbjct: 280 EALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD----GIV--PTKV 333

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINP---------------------------- 93
           +Y  +I G  + G   KA EL  QM  + + P                            
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM 393

Query: 94  ------DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
                 DV TYN++I   C A+   EA  LF  M   GV+P++ T++ ++   CK G M+
Sbjct: 394 ADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA +L   M   G +PN   Y TLM G+      + A  L   M+  G   N ++Y++LI
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513

Query: 208 NGYC---KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           NG C   +  E++G L  +   +S+G  PT++TYN++  G  +   +  AF ++ +M+  
Sbjct: 514 NGICMVDRVCEVDGMLKSF---MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  +   Y +FIDG C+ G    AL++   +R    + DI +Y+ LI+G C+ G +  A
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630

Query: 325 WEL-----------------------------------FHSLPRGVLIADVVTYNIMIHA 349
            +L                                   + S+ +G ++AD  TY  +I  
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE---TSKVVELLHRMDER 404
              DG +  A +L+ +M AKG  PD   F  L  G  R+ +     K++E + R+D R
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR 748



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 198/400 (49%), Gaps = 7/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+V TY+ LI+  C+      ALNLF+ M       GV  KP   
Sbjct: 385 DAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKA----GV--KPSIN 437

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++ G CK+G +D+A +L  +M  +   P+VVTY +++RG+    D + A  L  EM
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N  T++V+++ +C   ++ E   +L+  +  G  P    YN++++GF   G +
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMM 557

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  ++  M   G   N+ +Y+  I+GYC+    + AL + +++  +G++P +V YN L
Sbjct: 558 GSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNAL 617

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A +L   + + G+A +T  Y + I G      + E  + + ++     
Sbjct: 618 INGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGI 677

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +Y+ LIDG  K G +  A EL+  +     I D  T+  + H LC  G +D A  
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L  +M    V P+   +N L+ G +R+ +  +   L   M
Sbjct: 738 LLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 188/403 (46%), Gaps = 42/403 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +  ++K  G +    TY T+++ L +TG    AL + +EM +         K D +
Sbjct: 245 RALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK------KMDVI 298

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + TT++ G C    V  A  L  +     I P  V Y  +IRG      + +A  L  +M
Sbjct: 299 VATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM 358

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+    S+++  L  + + ++A  L E M   G+ P+ F YN L+   C   ++
Sbjct: 359 TGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKL 417

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  LF  M+  G K ++ +Y+ L+ GYCK   ++ A+ LYSEM  +G KP VVTY TL
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G       + A+ L DEM+++GV+ + + Y   I+G+C    +V+ +           
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC----MVDRV----------- 522

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                   C +DG+ KS       E F        I  ++TYN +I+     G M  A  
Sbjct: 523 --------CEVDGMLKS----FMSEGF--------IPTMMTYNSIINGFVKAGMMGSAFT 562

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++  M  KG+ P+ + + + + G  R   +   +++L+ +  R
Sbjct: 563 VYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRR 605



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 184/403 (45%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A ALF +++  G   +   +  L++   + G    A+ LF+EM       G    PD  
Sbjct: 175 DALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMP------GAEIDPDQR 228

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y   I  LCK G   +A  +L +MK+   +    TY +++          EA R+  EM
Sbjct: 229 VYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEM 288

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G + +V+  + +M   C   ++  A  L +  ++ G+ P   +Y  L+ G    G  
Sbjct: 289 RDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMT 348

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A EL   M   G   + F  S+++ G   ++  + A+ L+ EM   G+ P V TYN L
Sbjct: 349 QKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNL 407

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                + H++  A  LFD M++ GV      Y + + G CK G + EA++L+  + +   
Sbjct: 408 IHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGF 467

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + ++ +Y  L+ G         A+ L   + +  +  +  TYN++I+ +C   ++ +   
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +     ++G  P  + +N+++ G ++         +  +M E+
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 3/351 (0%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           GVV  PD    T ++    +      A  L ++M+ +    D   +++++          
Sbjct: 152 GVV--PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHE 209

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A RLF EM    + P+   +++ +  LCK G    A ++L  M ++G     F Y T++
Sbjct: 210 DAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D    TGR+  A  +   M   G K +V   + L+ GYC  +E+  AL+L+ E L  GI 
Sbjct: 270 DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV 329

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           PT V Y  L  G  ++   ++A++L  +M   G+   T+     + GL  +    +A+ L
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  +       D+ +Y+ LI   C++ +L+ A  LF  + +  +   + TYN ++   C 
Sbjct: 390 FEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            G MD+A  L+ +M  +G  P+ V + TLM G I   +      LL  M +
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 41/242 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  ++ +++  G  PN+ITY++ I+G CRTG + +AL    +M+N     G+  +PD V
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL----KMLNDVRRRGL--QPDIV 612

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF---------------- 105
            Y  +I+G C+EG +  A +LL+ +    + P+ V YNS+I G+                
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672

Query: 106 -----------------CYANDSNEA--KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                             ++ D N A    L+ EMM +G  P+  TF+ +   LC++G +
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDI 732

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A +LLE M ++ VRPN F+YN L++G+    ++  A  L   M +MG + +  +Y IL
Sbjct: 733 DGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDIL 792

Query: 207 IN 208
           ++
Sbjct: 793 VS 794



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E +  +  +   G   +  TY+TLI+G  + G+   AL L+ EM+      G +  PDA 
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK----GYI--PDAF 717

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +T +  GLC+ G +D AK+LL +M+  ++ P+V  YN +I G+       EA RL  EM
Sbjct: 718 TFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777

Query: 122 MDQGVQPNVVTFSVIMDE 139
           ++ G+QP+  T+ +++ +
Sbjct: 778 LNMGIQPDDTTYDILVSK 795


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+K  G +P+++TY +L+ G C  G    AL L+ EM +          P+ V
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG------FPPNEV 466

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ G  K+   D A  LL +M+   ++    TYN +I G    N   E   +    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +T++ I++   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L + +   G + ++ +Y+  I+ +CK   +  AL     +L  G+ P V  YN+ 
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +  A K +  M +  V ADT  Y T IDG  K G +  ALEL+  +     
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D ++++ L  GLC+SG +  A  L   + R  +  ++VTYN++I+A   DGK+ +A  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 362 LFLDMEAKGVAPDCVAFNTL 381
           L  +M + GV PD   ++ L
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 6/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY  LI+ LC+      A+NL+++M     E GV  KP  V Y +++ G C++G +
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKM----KEAGV--KPSIVTYHSLLLGYCEKGRM 446

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A +L  +M DK   P+ VTY ++++G+      + A  L  EM   GV     T++++
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ L    ++ E  ++L+  +  G  P    YN++++GF   G +  A  ++  M   G 
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N+ +Y+  I+GYC+    + A+ L   +   GI+P +  YN       +   + RA  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
               + + G+  D   Y +F+ G      + EA + + ++   +   D   Y+ LIDG  
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G +  A EL+  +    +I D  T+  + H LC  G +D A  L  DM    V+P+ V
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +N L+  C+R+ +  +  +L   M
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEM 771



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 200/418 (47%), Gaps = 41/418 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +  K++  G EP  +TYS++++ L +      AL L ++M+   G+     K D V
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK-----KMDVV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + T ++ G C  G V KA +L  ++    + P  VTY  +I+G      ++E  +L  +M
Sbjct: 293 LATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+ P+   F++++  L ++ + ++A  LL+L++  GV P+ F Y  L+   C   ++
Sbjct: 353 IEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKL 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L+  M+  G K ++ +Y  L+ GYC+   ++ AL LYSEM  KG  P  VTY TL
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA---------------------------------- 267
             G  +    + A+ L +EM+++GV+                                  
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 268 -ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
              T  Y + I+G  K G +  A  ++R +R      +I +Y+  IDG C++    +A +
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           L   + R  +  D+  YN  I   C  G M +A    + +   G+ PD   +N+ + G
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 181/395 (45%), Gaps = 8/395 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           ++++   G  P+  + + L+           AL LF+EM  G G     C  DA +Y  +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEM-RGKG-----CYADAKMYDVV 191

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I    + G    A  L  +M    + PD   Y   I G C   D++ A ++  +M + G 
Sbjct: 192 IRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +P  +T+S ++D L K  +M+EA +L  ++++  G + +  +   LM G+CL G V +A 
Sbjct: 252 EPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKAL 311

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF  + S G      +Y +LI G       +    L  +M+ +G+ P+   +N +  GL
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL 371

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               + + A  L   +   GV  D + Y   I  LCK+  + EA+ L+  ++    +  I
Sbjct: 372 LRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  L+ G C+ GR+  A +L+  +P      + VTY  ++         D A+ L  +
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           M   GV+     +N L+ G    N   +V E+L R
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKR 525



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 155/353 (43%), Gaps = 39/353 (11%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           GVV  PDA   T ++           A  L  +M+ K    D   Y+ VIR         
Sbjct: 145 GVV--PDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHC 202

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A RLF EM   GV+P+   +++ +  LCK    + A Q+L  M + G  P    Y++++
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVV 262

Query: 173 DGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           D      R++ A  L   M  + G K +V   ++L++GYC N E+  AL L+ E++S G+
Sbjct: 263 DVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGV 322

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            PT VTY  L  G       +  +KL  +M   G+   T+ +   I GL ++    +A+ 
Sbjct: 323 TPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIG 382

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L      LK  +D                                + DV TY  +IH LC
Sbjct: 383 L------LKLVVDTG------------------------------VPDVFTYGCLIHWLC 406

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              K+ +A +L+  M+  GV P  V +++L+LG        + ++L   M ++
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDK 459


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 207/404 (51%), Gaps = 12/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F   +  G  PN+ TY+ LI   CR        +  +E++N   E G    PD  
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQ----FDKAKELLNWMWEQGF--SPDVF 185

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+ L K G++  A +L  +M ++ + PDV  YN +I GF    D   A  ++  +
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +    V PN+ +++V+++ LCK GK +E+ ++   M +     + + Y+TL+ G C +G 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  ++  M   G   +V  Y+ ++NGY +   IE  L L+  M  +G + TVV+YN 
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE  +V+ A  +++ +      AD+  Y   + GLCKNGY+ +AL +       +
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +YS +I+GLC+ GRL     +   + +     +    N +I+      K++ A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK----VVELLHR 400
             F +M +KG  P  V +NTL+ G  +    S+    V E+LH+
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 206/405 (50%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNL---FEEMINGNGEFGVVCK 57
           +A  +F ++ + FGC+P + +Y++L+N L  +     A +    FE M       G+   
Sbjct: 96  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM-------GL--S 146

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  +I   C++   DKAKELL  M ++  +PDV +Y ++I         ++A +L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFC 176
           F EM ++GV P+V  +++++D   K G +  AS++ E +++   V PN   YN +++G C
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+ + + E++  M+      ++++YS LI+G C +  ++GA  +Y EM   G+ P VV
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YNT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA+ ++  L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 385

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C  D  +Y  L+ GLCK+G L  A  +      G    D   Y+ MI+ LC +G++
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+   +   M   G  P+    N ++ G +R ++    +     M
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +   G  P+V +Y TLIN L + G+   AL LF+EM     E GV   PD  
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM----PERGVT--PDVA 220

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +IDG  K+G +  A E+  ++ K  ++ P++ +YN +I G C     +E+  ++  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       ++ T+S ++  LC +G ++ A+++ + M + GV P+  VYNT+++G+   GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +    EL+  ME  GC+  V SY+ILI G  +N +++ A+S++  +  K      +TY  
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +   + +A  + +E +      DT+AY + I+GLC+ G + E   +   +    
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C+ +    + +I+G  ++ +L+ A   F ++        VVTYN +I+ L    +  +A+
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            L  +M  KG  P+ + ++ LM G
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNG 543



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 201/418 (48%), Gaps = 41/418 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+V  Y+ LI+G  + G  + A  ++E ++ G   +     P+  
Sbjct: 202 DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-----PNIP 256

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCK G  D++ E+  +MK      D+ TY+++I G C + + + A R++ EM
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 316

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------- 162
            + GV P+VV ++ +++   + G++EE  +L ++M + G R                   
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVD 376

Query: 163 ---------------PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
                           ++  Y  L+ G C  G +N+A  +    E+     + F+YS +I
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG C+   ++    +  +M   G KP     N +  G     ++E A + F  M   G  
Sbjct: 437 NGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF 496

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
                Y T I+GL K     EA  L + +     + ++ +YS L++GLC+  +L +A  L
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNL 556

Query: 328 F-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +  +L +G    DV  +NI+IH LC+ GK++ A  L+ +M+ +   P+ V  NTLM G
Sbjct: 557 WCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 162/289 (56%), Gaps = 6/289 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +++  L    C  + +TY  L++GLC+ G+   AL++ EE  NG G+       D  
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL------DTF 430

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+GLC+EG +D+   +L QM      P+    N+VI GF  A+   +A R F  M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P VVT++ +++ L K  +  EA  L++ M+  G +PN   Y+ LM+G C   ++
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L+      G K +V  ++I+I+G C + ++E AL LYSEM  +   P +VT+NTL
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             G +++   ERA K++D + ++G   D  +Y   + GLC    I +A+
Sbjct: 611 MEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAV 659



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  ++ ++K      ++ TYSTLI+GLC +G+   A  +++EM     E GV   PD V
Sbjct: 273 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM----AENGV--SPDVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+++G  + G +++  EL   M+ +     VV+YN +IRG       +EA  ++  +
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++    + +T+ V++  LCKNG + +A  +LE         + F Y+++++G C  GR+
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   M   GCK N    + +ING+ +  ++E AL  +  M+SKG  PTVVTYNTL
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 505

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A+ L  EM   G   +   Y   ++GLC+   +  AL L+        
Sbjct: 506 INGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 565

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D++ ++ +I GLC SG+++ A +L+  + +   + ++VT+N ++         ++A  
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++  +   G  PD +++N  + G    +  S  V  L+   +R
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 668



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 197/379 (51%), Gaps = 7/379 (1%)

Query: 24  TLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELL 83
           T+I    +      AL++F+ M   +  FG  C+P    Y ++++ L +    D+A+   
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRM---HEIFG--CQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           L  +   ++P++ TYN +I+  C     ++AK L   M +QG  P+V ++  +++ L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS-MESMGCKHNVFS 202
           G M +A +L + M + GV P+   YN L+DGF   G +  A E++   ++      N+ S
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+++ING CK  + + +  ++  M        + TY+TL  GL     ++ A +++ EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
            +GV+ D   Y T ++G  + G I E LEL++ +    C   + SY+ LI GL ++ ++ 
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 376

Query: 323 IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            A  ++  LP     AD +TY +++H LC +G ++KA  +  + E      D  A+++++
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436

Query: 383 LGCIRNNETSKVVELLHRM 401
            G  R     +V  +L +M
Sbjct: 437 NGLCREGRLDEVAGVLDQM 455



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 195/386 (50%), Gaps = 7/386 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G  P+V+ Y+T++NG  R G     L L++ M          C+   V 
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG------CR-TVVS 361

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I GL +   VD+A  +   + +K+   D +TY  ++ G C     N+A  +  E  
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +     +   +S +++ LC+ G+++E + +L+ M + G +PN  V N +++GF    ++ 
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A   F +M S GC   V +Y+ LING  K +    A +L  EML KG KP ++TY+ L 
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +++ A  L+ +    G   D   +   I GLC +G + +AL+L+  ++  KC 
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +++ L++G  K    + A +++  + +     D+++YNI +  LC+  ++  A   
Sbjct: 602 PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGF 661

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRN 388
             D   +GV P  + +N L+   + N
Sbjct: 662 LNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 149/278 (53%), Gaps = 3/278 (1%)

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           P  V  +VI     KN   ++A  + + M +I G +P    YN+L++    + + + A+ 
Sbjct: 77  PEDVALTVI-KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
            F+  E+MG   N+ +Y+ILI   C+ K+ + A  L + M  +G  P V +Y TL   L 
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDI 305
           +   +  A KLFDEM   GV  D   Y   IDG  K G I+ A E++ R L+      +I
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY+ +I+GLCK G+   ++E++H + +     D+ TY+ +IH LC  G +D A  ++ +
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           M   GV+PD V +NT++ G +R     + +EL   M++
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 41/180 (22%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  ++   G +PN+ITYS L+NGLC+     +ALNL+ + +    E G   KPD  
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL----EKGF--KPDVK 570

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNI------------------------------ 91
           ++  II GLC  G V+ A +L  +MK +                                
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630

Query: 92  -----NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
                 PD+++YN  ++G C  +  ++A     + +D+GV P  +T+++++  +  NG +
Sbjct: 631 LQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 2/193 (1%)

Query: 214 KEIEGALSLYSEMLS-KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           K    ALS++  +    G   T   ++ +   LF+   V    ++ + ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 273 YRTFIDGLCKNGYIVEALELFRTLR-ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
             T I    KN    +AL++F+ +  I  C+  IRSY+ L++ L +S +   A   F   
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               L  ++ TYNI+I   C   + DKA +L   M  +G +PD  ++ TL+    +N   
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 392 SKVVELLHRMDER 404
           S  ++L   M ER
Sbjct: 201 SDALKLFDEMPER 213


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+K  G +P+++TY +L+ G C  G    AL L+ EM +          P+ V
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG------FPPNEV 466

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ G  K+   D A  LL +M+   ++    TYN +I G    N   E   +    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +T++ I++   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L + +   G + ++ +Y+  I+ +CK   +  AL     +L  G+ P V  YN+ 
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +  A K +  M +  V ADT  Y T IDG  K G +  ALEL+  +     
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D ++++ L  GLC+SG +  A  L   + R  +  ++VTYN++I+A   DGK+ +A  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 362 LFLDMEAKGVAPDCVAFNTL 381
           L  +M + GV PD   ++ L
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 41/418 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +  K++  G EP  +TYS++++ L + G    AL L ++M+   G+     K D V
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVV 292

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           + T ++ G C  G V KA +L  ++    + P  VTY  +I+G      S+E  +L  +M
Sbjct: 293 LATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQM 352

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+  +   F++++  L ++ + ++A  LLEL++  GV P+ F Y  L+   C   ++
Sbjct: 353 IEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKL 411

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L+  M+  G K ++ +Y  L+ GYC+   ++ AL LYSEM  KG  P  VTY TL
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVA---------------------------------- 267
             G  +    + A+ L +EM+++GV+                                  
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 268 -ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
              T  Y + I+G  K G +  A  ++R +R      +I +Y+  IDG C++    +A +
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           L   + R  +  D+  YN  I   C  G M +A    + +   G+ PD   +N+ + G
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 6/385 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V TY  LI+ LC+      A+NL+++M     E GV  KP  V Y +++ G C++G +
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKM----KEAGV--KPSIVTYHSLLLGYCEKGRM 446

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D+A +L  +M DK   P+ VTY ++++G+      + A  L  EM   GV     T++++
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           ++ L    ++ E  ++L+  +  G  P    YN++++GF   G +  A  ++  M   G 
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             N+ +Y+  I+GYC+    + A+ L   +   GI+P +  YN       +   + RA  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
               + + G+  D   Y +F+ G      + EA + + ++   +   D   Y+ LIDG  
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K G +  A EL+  +    +I D  T+  + H LC  G +D A  L  DM    V+P+ V
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            +N L+  C+R+ +  +  +L   M
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEM 771



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 183/395 (46%), Gaps = 8/395 (2%)

Query: 7   FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTI 66
           ++++   G  P+  + + L+    R      AL LF+EM  G G     C  DA +Y  +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEM-RGKG-----CYADAKMYDVV 191

Query: 67  IDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGV 126
           I    + G    A  L  +M    + PD   Y   I G C   D++ A ++  +M + G 
Sbjct: 192 IRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 127 QPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +P  +T+S ++D L K G+M+EA +L  ++++  G + +  +   LM G+CL G V +A 
Sbjct: 252 EPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKAL 311

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF  + S G      +Y +LI G       +    L  +M+ +G+  +   +N +  GL
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               + + A  L + +   GV  D + Y   I  LCK+  + EA+ L+  ++    +  I
Sbjct: 372 LRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +Y  L+ G C+ GR+  A +L+  +P      + VTY  ++         D A+ L  +
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           M   GV+     +N L+ G    N   +V E+L R
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKR 525



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 147/353 (41%), Gaps = 39/353 (11%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSN 112
           GVV  PDA   T ++    +      A  L  +M+ K    D   Y+ VIR         
Sbjct: 145 GVV--PDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHC 202

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +A RLF EM   GV+P+   +++ +  LCK    + A Q+L  M + G  P    Y++++
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVV 262

Query: 173 DGFCLTGRVNRAKELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           D     GR++ A  L   M  + G K +V   ++L++GYC + E                
Sbjct: 263 DVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGE---------------- 306

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
                              V +A  LFDE+   GV      Y   I G    G   E  +
Sbjct: 307 -------------------VGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYK 347

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L R +      L    ++ +I GL +  R K A  L   L     + DV TY  +IH LC
Sbjct: 348 LCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLE-LVVDTGVPDVFTYGCLIHWLC 406

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              K+ +A +L+  M+  GV P  V +++L+LG        + ++L   M ++
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDK 459


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 184/335 (54%), Gaps = 8/335 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+V++Y+TLINGLC+ G    A +LF +M+   G     C+P+A  Y  ++DGLCK+  
Sbjct: 93  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG-----CRPNAFTYNALVDGLCKQDR 147

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D A+ ++ + + ++  PDVVTYN+++         +EA   F +M ++G  P +V+F+ 
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           I+  LC+  ++ +A ++   MI     PN   Y+ ++DG C + +++ A++L   M S G
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C+ ++ +Y+ L+ G+     ++ AL L   M+S+G  P VVTY  +   L ++ +V+ A 
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++F E+  +  + +   Y   I G C+   + E     + +R + C  ++ +Y+ +I GL
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEG---GKVMREMACRPNVVTYNTMIWGL 384

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
               R + A+ +F  +     + D  TY  +  AL
Sbjct: 385 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 191/380 (50%), Gaps = 9/380 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A +L  ++   G + N  T S ++ GLCR G    AL  F+  +    E     +PD V 
Sbjct: 44  AFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL----ELAHA-QPDVVS 98

Query: 63  YTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           YTT+I+GLCK G VD A +L  +M       P+  TYN+++ G C  +  + A+ +  E 
Sbjct: 99  YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEA 158

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+VVT++ +M  L + G+++EA      M + G  P    +N ++ G C   R+
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 218

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A E+F  M       N+ +YS++I+G CK+ +++ A  L   M+S+G +P +V Y  L
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +G     +++ A  L   M   G   D   Y   ID LCK G + +A E+FR L   KC
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 338

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++ +YS LI G C++ R+    ++   +       +VVTYN MI  L    + ++A+ 
Sbjct: 339 SPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYG 395

Query: 362 LFLDMEAKGVAPDCVAFNTL 381
           +F +M   G  PD   +  L
Sbjct: 396 MFREMSECGFVPDARTYRGL 415



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 186/386 (48%), Gaps = 11/386 (2%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           +TY+ LI G C       A +L  EM       G+ C       + I+ GLC+ G V +A
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREM----DVEGMQCNDRTT--SIILQGLCRCGRVAQA 79

Query: 80  KELL-LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIM 137
            E     ++  +  PDVV+Y ++I G C     + A  LF +M+  G  +PN  T++ ++
Sbjct: 80  LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D LCK  +++ A  ++    +    P+   YNTLM      GRV+ A   F  M   G  
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             + S++ +I G C+ + +  AL +++EM+ +   P +VTY+ +  GL +  Q++ A +L
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 259

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
            D M   G   D  AY   + G    G +  AL L R +    C  D+ +Y+ +ID LCK
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 319

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            GR+  A E+F  L       +VVTY+ +I   C   ++D+   +  +M  +   P+ V 
Sbjct: 320 VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVT 376

Query: 378 FNTLMLGCIRNNETSKVVELLHRMDE 403
           +NT++ G    +   +   +   M E
Sbjct: 377 YNTMIWGLSMVDRNEEAYGMFREMSE 402



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 188/377 (49%), Gaps = 13/377 (3%)

Query: 29  LCRTGHTIVALNLFEEMINGNGEFGVVCK--PDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           + R G    AL LF E           C+    +V Y  +I G C    +D A  LL +M
Sbjct: 1   MVRAGSHNQALQLFREN---------PCQLPASSVTYNVLIRGFCNASDLDAAFSLLREM 51

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSVIMDELCKNGK 145
             + +  +  T + +++G C      +A   F   ++    QP+VV+++ +++ LCK G+
Sbjct: 52  DVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGR 111

Query: 146 MEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++ A  L   M+   G RPNAF YN L+DG C   R++ A+ +           +V +Y+
Sbjct: 112 VDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYN 171

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L+    +   ++ AL+ +++M  +G  PT+V++N +  GL    ++  A ++F+EM   
Sbjct: 172 TLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 231

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
               +   Y   IDGLCK+  + EA +L   +    C  D+ +Y+ L+ G   +GRL  A
Sbjct: 232 DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSA 291

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +     I DVVTY ++I  LC  G++D AH++F ++ A   +P+ V ++ L+ G
Sbjct: 292 LGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGG 351

Query: 385 CIRNNETSKVVELLHRM 401
             R +   +  +++  M
Sbjct: 352 YCRASRVDEGGKVMREM 368



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 134/249 (53%), Gaps = 9/249 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A FT++   G  P +++++ +I GLCR      AL +F EMI+ +        P+ V
Sbjct: 185 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLV 238

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +IDGLCK   +D+A++LL +M  +   PD+V Y  ++ GF  A   + A  L   M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+VVT++V++D+LCK G++++A ++   ++     PN   Y+ L+ G+C   RV
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +   ++   M  M C+ NV +Y+ +I G       E A  ++ EM   G  P   TY  L
Sbjct: 359 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415

Query: 242 FIGLFEIHQ 250
              L  I Q
Sbjct: 416 KRALRMIDQ 424



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 117/230 (50%), Gaps = 3/230 (1%)

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G  N+A +LF          +V +Y++LI G+C   +++ A SL  EM  +G++    T
Sbjct: 4   AGSHNQALQLFRENPCQLPASSV-TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRT 62

Query: 238 YNTLFIGLFEIHQVERAFKLFD-EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            + +  GL    +V +A + FD  ++      D  +Y T I+GLCK G +  A +LFR +
Sbjct: 63  TSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 122

Query: 297 RILK-CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
                C  +  +Y+ L+DGLCK  RL  A  +     +     DVVTYN ++ AL   G+
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +D+A   F  M  +G  P  V+FN ++ G  R    +  +E+ + M +R+
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 232


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 182/340 (53%), Gaps = 1/340 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+  ++  ++    + G +  A+++  +M+ +++ P VVT+N++I G C A D +    L
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGL 242

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + EM D GV+P+V T+  ++   C+ G+ME A ++   M   GV PNA V+ TL+D  C 
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G VN   +L+  M   G   ++ +Y+ L+NG C+ + ++ A S+  EM + G+KP  VT
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y TL  G  +  +++ A  +  +M    V+ D   Y   I GL K G  V+A  + R + 
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E D  +Y+ +ID  C+ G +K  ++L   +        VVTYN++++ LC  G+M 
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMK 482

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            A  L   M   GV+PD + +N L+ G  ++ + +   EL
Sbjct: 483 NADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL 522



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 10/381 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   + +L   G  P    ++ L+    R G  + A  +F+EM           +P  V
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-------VQPTVV 221

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T+I G+C+   +D    L  +M D  + PDV TY ++I+GFC       A ++F EM
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV PN V F+ ++D  CK G +     L + M   GV P+   YN L++G C    +
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A+ +   M++ G K +  +Y+ LI+G CK+ +++ A+ +  +M  K +    VTY  L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A ++  EM    +  D   Y   ID  C+ G +    +L + ++    
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ +++GLCK G++K A  L H++    +  D +TYNI++   C  GK+  + +
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L     +KG+ PD   + +L+
Sbjct: 522 L---ESSKGMVPDFAVYTSLI 539



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 1/318 (0%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           LQ+ D  + P+   +N ++R F    +   A+++F EM  + VQP VVTF+ ++  +C+ 
Sbjct: 175 LQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRA 233

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
             ++    L + M  +GV+P+ + Y  L+ GFC TGR+  A ++F  M   G   N   +
Sbjct: 234 RDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVF 293

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+ +CK   +   + LY +M  +G+ P +V YN L  GL     ++ A  + +EM+ 
Sbjct: 294 TTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKN 353

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G+  D   Y T IDG CK+G +  A+++ + +   +  LD  +Y+ LI GL K+GR   
Sbjct: 354 AGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVD 413

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A  +   +    L  D  TY ++I A C  G +     L  +M+ KG  P  V +N +M 
Sbjct: 414 AERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMN 473

Query: 384 GCIRNNETSKVVELLHRM 401
           G  +  +      LLH M
Sbjct: 474 GLCKLGQMKNADMLLHAM 491



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 1/294 (0%)

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
           + EA   +++++D G+ P    F+V+M +  + G++  A ++ + M +  V+P    +NT
Sbjct: 167 TPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNT 225

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G C    ++    L+  M  +G K +V++Y  LI G+C+   +E A+ +++EM   G
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG 285

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P  V + TL     +   V     L+ +M+  GV  D  AY   ++GLC+   +  A 
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            +   ++    + D  +Y+ LIDG CK G+L +A ++   +    +  D VTY  +I  L
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              G+   A  +  +M    + PD   +  ++    R  +     +LL  M  +
Sbjct: 406 SKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 9/142 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +  ++     EP+  TY+ +I+  CR G       L +EM N         KP  
Sbjct: 412 VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK------KPGV 465

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  I++GLCK G +  A  LL  M +  ++PD +TYN ++ G C       ++ L   
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL--- 522

Query: 121 MMDQGVQPNVVTFSVIMDELCK 142
              +G+ P+   ++ ++ EL K
Sbjct: 523 ESSKGMVPDFAVYTSLISELAK 544


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 196/406 (48%), Gaps = 14/406 (3%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING--------------NGEFGVV 55
           LK +   P+VI  ++L+N L + G   +A      M+ G                 +G  
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQG 215

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C P+ + Y T+IDG CK+G ++ A  L +++K K   P V TY ++I GFC   D     
Sbjct: 216 CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAID 275

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           RL +EM  +G+  NV  ++ I+D   K+G + +A + +E MI+ G +P+   YNTL+ G 
Sbjct: 276 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 335

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G+V+ A +L       G   N FSY+ LI+ YCK    + A +   EM  +G KP +
Sbjct: 336 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 395

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VTY  L  GL    +V+ A  + ++M   GV  D   Y   + GLCK   +  A  L   
Sbjct: 396 VTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAE 455

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       D   Y+ L+DG  ++G L  A +LF       +   +V YN MI   C  G 
Sbjct: 456 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 515

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M  A      M+ + +APD   ++T++ G ++ ++     ++   M
Sbjct: 516 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 561



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 168/323 (52%), Gaps = 14/323 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++ + G   NV  Y+T+I+   + GH + A+   E MI    E G  CKPD V Y T
Sbjct: 277 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI----ECG--CKPDIVTYNT 330

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I G C++G V +A +LL Q   K + P+  +Y  +I  +C     + A    IEM ++G
Sbjct: 331 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 390

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
            +P++VT+  ++  L   G+++ A  + E M++ GV P+A +YN LM G C   ++  AK
Sbjct: 391 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 450

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M       + F Y+ L++G+ +N  ++ A  L+   + KG+ P +V YN +  G 
Sbjct: 451 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 510

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   ++ A    + M++  +A D + Y T IDG  K   +  A ++FR +  +KC+ ++
Sbjct: 511 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 570

Query: 306 RSYSCLIDGLCKSGRLKIAWELF 328
                 +DGL   G L I   LF
Sbjct: 571 ------MDGL--QGLLLIIPSLF 585



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 163/366 (44%), Gaps = 28/366 (7%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELL-LQMKDKNINPDVVTYNSV--------------- 101
           P     + +I      G V+KA EL    +K     PDV+  NS+               
Sbjct: 127 PTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARK 186

Query: 102 -----IRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL-LEL 155
                ++G C      E ++L  +   QG  PN++ ++ ++D  CK G ME A+ L +EL
Sbjct: 187 FTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIEL 246

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
            ++ G  P    Y  +++GFC  G       L + M S G   NV  Y+ +I+   K+  
Sbjct: 247 KLK-GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 305

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I  A+     M+  G KP +VTYNTL  G     +V  A +L ++    G+  + ++Y  
Sbjct: 306 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 365

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRG 334
            I   CK G    A      +     + D+ +Y  L+ GL  +G + +A  +    L RG
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRN---NET 391
           V   D   YNI++  LC   K+  A  L  +M  + V PD   + TL+ G IRN   +E 
Sbjct: 426 VF-PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEA 484

Query: 392 SKVVEL 397
            K+ EL
Sbjct: 485 RKLFEL 490



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 16/343 (4%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y++++  L +     + + +L  M+ + ++P     + VI+ +  +    +A  L+  ++
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 123 DQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+V+  + +++ L K G++E A +   +M++               G C  G++
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVK---------------GLCKEGKL 201

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              ++L       GC  N+  Y+ LI+GYCK  ++E A  L+ E+  KG  PTV TY  +
Sbjct: 202 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAI 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +    +   +L  EM   G+  +   Y T ID   K+G+IV+A+E    +    C
Sbjct: 262 INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGC 321

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + DI +Y+ LI G C+ G++  A +L        L+ +  +Y  +IHA C  G  D+A +
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             ++M  +G  PD V +  L+ G +   E    + +  +M ER
Sbjct: 382 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLER 424


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 206/403 (51%), Gaps = 8/403 (1%)

Query: 1   MEAAALFTKLKAFGCEPNV--ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           ++ AA   K  A  C  +V  ++ S +++G C++G    A  L +EM       GV  K 
Sbjct: 123 LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEM----PRHGV--KV 176

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A+ Y +++D   +E   D+  E+L  M+++ I P V TY  ++ G   A D  + + +F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  +S +++  C+ G +  AS++ +  +  G+ PN   Y  L++GFC  
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A+ L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+  V TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  + +Y+ ++DG  K G ++ A      + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDV 476

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF +M+ +G  P+ VA+  L+ G  +   + +  +L   M
Sbjct: 477 ALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 519



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 176/344 (51%), Gaps = 6/344 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EP V TY+ L++GL           +FEEM + N         D   Y+++I+  C+ 
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFYSSVINAYCRA 261

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V +A E+  +     I P+  TY ++I GFC       A+ L  +M  +GV  N + F
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++D  C+   +++A ++  +M ++G+  + + YNTL  G     R++ AK L   M  
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + N  SY+ LI+ +C   ++  A  L+ EM   G +P++VTYN +  G  +   +  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +   EM++ G+  D ++Y   + G C NG +  AL LF  ++    + ++ +Y+ LI 
Sbjct: 442 AERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALIS 501

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
           GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 502 GLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 3/350 (0%)

Query: 58  PDAVI---YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           PD+V     + ++DG CK G V  A++LL +M    +  + + YNS++  +    D +  
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
             +   M ++G++P V T+++++D L     + +   + E M    +  + + Y+++++ 
Sbjct: 198 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 257

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  G V RA E+F      G + N  +Y  LING+CK  ++E A  L ++M  +G+   
Sbjct: 258 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 317

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            + +NT+  G    + V++A ++   M++ G+  D + Y T   GL +   + EA  L R
Sbjct: 318 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 377

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +       +  SY+ LI   C  G +  A  LF  +        +VTYN+M+      G
Sbjct: 378 IMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKG 437

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            + +A     +ME KG+ PD  ++  L+ G   N +    + L   M +R
Sbjct: 438 SIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQR 487



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 5/334 (1%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNS---VIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           G +D A +LL Q       PD VT  S   V+ G+C +     A++L  EM   GV+ N 
Sbjct: 121 GHLDTAADLLKQAATSC--PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           + ++ ++D   +    +  +++L++M   G+ P    Y  L+DG      + + + +F  
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M+S     +V+ YS +IN YC+   +  A  ++ E +  GI+P   TY  L  G  +I Q
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +E A  L  +MQ  GV  +   + T IDG C+   + +ALE+   +  +  ELD+ +Y+ 
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L  GL ++ R+  A  L   +    +  + V+Y  +I   C +G M +A  LF +M   G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             P  V +N +M G I+     +       M+++
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKK 452



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%)

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           S S ++DG CKSGR+  A +L   +PR  +  + + YN ++ A   +   D+  ++   M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           E +G+ P    +  L+ G     + +KV  +   M  +N
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 203/404 (50%), Gaps = 8/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA + F   +  G  PN+ TY+ LI   CR      A  L   M      +G    PD  
Sbjct: 107 EAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM------WGQGFSPDVF 160

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+ L K G++  A +L  +M ++ + PDV  YN +I GF    D   A  ++  +
Sbjct: 161 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 220

Query: 122 MD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +    V PN+ +++V+++ LCK GK +E+ ++   M +     + + Y+TL+ G C +G 
Sbjct: 221 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 280

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A  ++  M   G   +V  Y+ ++NGY +   IE  L L+  M  +G + TVV+YN 
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 339

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLFE  +V+ A  +++ +      AD+  Y   + GLCKNGY+ +AL +       +
Sbjct: 340 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 399

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            +LD  +YS +I+GLC+ GRL     +   + +     +    N +I+      K++ A 
Sbjct: 400 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDAL 459

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             F +M +KG  P  V +NTL+ G  +    S+   L+  M ++
Sbjct: 460 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 205/405 (50%), Gaps = 15/405 (3%)

Query: 2   EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNL---FEEMINGNGEFGVVCK 57
           +A  +F ++ + FGC+P + +Y++L+N L  +     A +    FE M       G+   
Sbjct: 71  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM-------GL--S 121

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P+   Y  +I   C++   DKAKELL  M  +  +PDV +Y ++I         ++A +L
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ-IGVRPNAFVYNTLMDGFC 176
           F EM ++GV P+V  +++++D   K G +  AS++ E +++   V PN   YN +++G C
Sbjct: 182 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G+ + + E++  M+      ++++YS LI+G C +  ++GA  +Y EM   G+ P VV
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YNT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA+ ++  L
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 360

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
               C  D  +Y  L+ GLCK+G L  A  +      G    D   Y+ MI+ LC +G++
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           D+   +   M   G  P+    N ++ G +R ++    +     M
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 214/440 (48%), Gaps = 43/440 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +   G  P+V +Y TLIN L + G+   AL LF+EM     E GV   PD  
Sbjct: 142 KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM----PERGVT--PDVA 195

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +IDG  K+G +  A E+  ++ K  ++ P++ +YN +I G C     +E+  ++  
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 255

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       ++ T+S ++  LC +G ++ A+++ + M + GV P+  VYNT+++G+   GR
Sbjct: 256 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +    EL+  ME  GC+  V SY+ILI G  +N +++ A+S++  +  K      +TY  
Sbjct: 316 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE------------ 288
           L  GL +   + +A  + +E +      DT+AY + I+GLC+ G + E            
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434

Query: 289 -----------------------ALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                                  AL  F  +    C   + +Y+ LI+GL K+ R   A+
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            L   + +     +++TY+++++ LC   K+D A +L+     KG  PD    N ++ G 
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554

Query: 386 IRNNETSKVVELLHRMDERN 405
             + +    ++L   M +RN
Sbjct: 555 CSSGKVEDALQLYSEMKQRN 574



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 212/403 (52%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  ++ ++K      ++ TYSTLI+GLC +G+   A  +++EM     E GV   PD V
Sbjct: 248 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM----AENGV--SPDVV 301

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T+++G  + G +++  EL   M+ +     VV+YN +IRG       +EA  ++  +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELL 360

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++    + +T+ V++  LCKNG + +A  +LE         + F Y+++++G C  GR+
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +    +   M   GCK N +  + +ING+ +  ++E AL  +  M+SKG  PTVVTYNTL
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 480

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   A+ L  EM + G   +   Y   ++GLC+   +  AL L+        
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGF 540

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D++ ++ +I GLC SG+++ A +L+  + +   + ++VT+N ++         ++A  
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++  +   G+ PD +++N  + G    +  S  V  L+   +R
Sbjct: 601 IWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 643



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 195/382 (51%), Gaps = 7/382 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  ++ ++   G  P+V+ Y+T++NG  R G     L L++ M          C+   V 
Sbjct: 284 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG------CR-TVVS 336

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I GL +   VD+A  +   + +K+   D +TY  ++ G C     N+A  +  E  
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +     +   +S +++ LC+ G+++E + +L+ M + G +PN +V N +++GF    ++ 
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A   F +M S GC   V +Y+ LING  K +    A +L  EML KG KP ++TY+ L 
Sbjct: 457 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLM 516

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +++ A  L+ +    G   D   +   I GLC +G + +AL+L+  ++   C 
Sbjct: 517 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCV 576

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +++ L++G  K    + A +++  + +  L  D+++YNI +  LC+  ++  A   
Sbjct: 577 PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGF 636

Query: 363 FLDMEAKGVAPDCVAFNTLMLG 384
             D   +GV P  + +N L+ G
Sbjct: 637 LNDAVDRGVLPTAITWNILVQG 658



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 166/318 (52%), Gaps = 11/318 (3%)

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
           +KN +  +  ++SV R   Y++       +F  ++ +   P +V  +       KN   +
Sbjct: 20  EKNPHSALSIFDSVTRFPGYSH----TPYVFHHILKRLFDPKLVAHAY-----AKNSMPD 70

Query: 148 EASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +A  + + M +I G +P    YN+L++    + + + A+  F+  E+MG   N+ +Y+IL
Sbjct: 71  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNIL 130

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I   C+ K+ + A  L + M  +G  P V +Y TL   L +   +  A KLFDEM   GV
Sbjct: 131 IKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGV 190

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
             D   Y   IDG  K G I+ A E++ R L+      +I SY+ +I+GLCK G+   ++
Sbjct: 191 TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESF 250

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           E++H + +     D+ TY+ +IH LC  G +D A  ++ +M   GV+PD V +NT++ G 
Sbjct: 251 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 310

Query: 386 IRNNETSKVVELLHRMDE 403
           +R     + +EL   M++
Sbjct: 311 LRAGRIEECLELWKVMEK 328



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 6/209 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F  + + GC P V+TY+TLINGL +      A  L +EM+          KP+ +
Sbjct: 457 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG------WKPNMI 510

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +++GLC+   +D A  L  Q  +K   PDV  +N +I G C +    +A +L+ EM
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   PN+VT + +M+   K    E AS++ + ++Q G++P+   YN  + G C   R+
Sbjct: 571 KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRI 630

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGY 210
           + A          G      +++IL+ GY
Sbjct: 631 SDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 1/125 (0%)

Query: 281 CKNGYIVEALELFRTLR-ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
            KN    +AL++F+ +  I  C+  IRSY+ L++ L +S +   A   F       L  +
Sbjct: 64  AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 123

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           + TYNI+I   C   + DKA +L   M  +G +PD  ++ TL+    +N   S  ++L  
Sbjct: 124 LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183

Query: 400 RMDER 404
            M ER
Sbjct: 184 EMPER 188


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 172/316 (54%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C PD + Y  +++G+C+EG VD A E L  +      P+ V+YN V++G   A    +A+
Sbjct: 12  CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +L  EM  +G  PNVVTF++++  LC+ G +E A ++LE + + G  PN+  YN L+  F
Sbjct: 72  KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C   ++++A      M S GC  ++ SY+ L+   C+N E++ A+ L  ++  KG  P +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           ++YNT+  GL +  + + A +L DEM   G+  D   Y T   GLC+   I EA+  F  
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           ++ +     +  Y+ ++ GLCK      A +LF  +     + +  TY I++  L  +G 
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGL 311

Query: 356 MDKAHDLFLDMEAKGV 371
           + +A DL   + ++GV
Sbjct: 312 VKEARDLLGQLCSRGV 327



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 174/332 (52%), Gaps = 7/332 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +++  GC P++ITY+ ++NG+C+ G    A+   E + +  GE      P+ V Y  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGE------PNTVSYNI 56

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GL      + A++L+ +M  K   P+VVT+N +I   C       A  +  ++   G
Sbjct: 57  VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYG 116

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
             PN ++++ ++   CK  KM++A   +ELM+  G  P+   YNTL+   C  G V+ A 
Sbjct: 117 CTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 176

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L   ++  GC   + SY+ +I+G  K  + + AL L  EM+SKG++P ++TY T+  GL
Sbjct: 177 DLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               ++E A + F ++Q  G+      Y   + GLCK      A++LF  +    C  + 
Sbjct: 237 CREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNE 296

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
            +Y+ L++GL   G +K A +L   L  RGV+
Sbjct: 297 STYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 163/324 (50%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           +LL +M+DK   PD++TYN V+ G C     ++A      +   G +PN V++++++  L
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
               + E+A +L+E M   G  PN   +N L+   C  G V  A E+   +   GC  N 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            SY+ L++ +CK K+++ A++    M+S+G  P +V+YNTL   L    +V+ A  L  +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           ++  G +    +Y T IDGL K G   EALEL   +     + DI +Y+ +  GLC+  +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++ A   F  +    +   VV YN ++  LC   +   A DLF  M + G  P+   +  
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G        +  +LL ++  R
Sbjct: 302 LVEGLAYEGLVKEARDLLGQLCSR 325



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 6/295 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A      L ++G EPN ++Y+ ++ GL        A  L EEM +        C P+ V
Sbjct: 34  DAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG------CPPNVV 87

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I  LC+ G V+ A E+L Q+      P+ ++YN ++  FC     ++A      M
Sbjct: 88  TFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELM 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++V+++ ++  LC+NG+++ A  LL  +   G  P    YNT++DG    G+ 
Sbjct: 148 VSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKT 207

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A EL   M S G + ++ +Y+ + +G C+  +IE A+  + ++   GI+PTVV YN +
Sbjct: 208 KEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAI 267

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            +GL +  +   A  LF  M  +G   +   Y   ++GL   G + EA +L   L
Sbjct: 268 LLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 141/265 (53%), Gaps = 6/265 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   GC PNV+T++ LI+ LCR G    A+ + E++     ++G  C P+++
Sbjct: 69  DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQI----PKYG--CTPNSL 122

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++   CK+  +DKA   +  M  +   PD+V+YN+++   C   + + A  L  ++
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P +++++ ++D L K GK +EA +LL+ MI  G++P+   Y T+  G C   ++
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A   F  ++ MG +  V  Y+ ++ G CK +E   A+ L+S M+S G  P   TY  L
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     V+ A  L  ++   GV
Sbjct: 303 VEGLAYEGLVKEARDLLGQLCSRGV 327



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 1   MEAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           M+ A  F +L  + GC P++++Y+TL+  LCR G   VA++L  ++  G G     C P 
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL-KGKG-----CSPV 190

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y T+IDGL K G   +A ELL +M  K + PD++TY ++  G C  +   EA R F 
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFC 250

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ D G++P VV ++ I+  LCK  +   A  L   MI  G  PN   Y  L++G    G
Sbjct: 251 KVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEG 310

Query: 180 RVNRAKELFVSMESMGCKHNVF 201
            V  A++L   + S G  +  F
Sbjct: 311 LVKEARDLLGQLCSRGVVNKKF 332



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 6/165 (3%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L  +LK  GC P +I+Y+T+I+GL + G T  AL L +EMI+         +PD + 
Sbjct: 175 AIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG------LQPDIIT 228

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTTI  GLC+E  +++A     +++D  I P VV YN+++ G C   +++ A  LF  M+
Sbjct: 229 YTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMI 288

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFV 167
             G  PN  T++++++ L   G ++EA  LL  +   GV    F+
Sbjct: 289 SNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFM 333



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 95/182 (52%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L  EM  KG  P ++TYN +  G+ +  +V+ A +  + +  +G   +T +Y   + G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           L       +A +L   +    C  ++ +++ LI  LC+ G ++ A E+   +P+     +
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
            ++YN ++HA C   KMDKA      M ++G  PD V++NTL+    RN E    ++LLH
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 400 RM 401
           ++
Sbjct: 181 QL 182


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 202/403 (50%), Gaps = 10/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F +     C P++ +++ +I   C   +   A      M +     G+   PD  
Sbjct: 62  EAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRS----LGI--PPDVT 115

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G C  G V +A     +M  K   P+V TYN+VI G C     + A  LF  +
Sbjct: 116 AYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRL 174

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+  T+S ++  LC+  ++E A ++ ++M++     +A  YN + DGFC   RV
Sbjct: 175 PHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRV 234

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A E+  +M   GCK +V +Y+ +ING C+ K  IE A  L+ +M+     P  VTY T
Sbjct: 235 DEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGT 294

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           + +GL +I++V+R  +LF  M + G++ D +AY + I    K   + EA  + +      
Sbjct: 295 MILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH 354

Query: 301 CELDIRSYSCLIDGLCKSGRLKI--AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              D+  Y+ LI G C++ + ++  A  LF ++    +  +V+TYNI++  LC  G+ D+
Sbjct: 355 VGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDE 414

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A+ +F +M     +P+ + F  + +G I   +T K   +   M
Sbjct: 415 AYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 186/364 (51%), Gaps = 10/364 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +++ G  P+V  Y+ ++ G C  G    AL  F       G+ G  CKP+   Y T+I+G
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATYNTVING 157

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK G +D A  L  ++    ++PD  TY++++ G C A     A +++  M++     +
Sbjct: 158 LCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGD 217

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC-LTGRVNRAKELF 188
              ++ + D  CK  +++EA ++L+ MIQ G +P+   YN +++G C    R+  A  LF
Sbjct: 218 AGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLF 277

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M    C  N  +Y  +I G  K  E++  L L+  M   G+ P    Y++L     ++
Sbjct: 278 QQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKV 337

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC--KNGYIVEALELFRTLRILKCELDIR 306
            +++ A  +  +  R+ V  D + Y T I G C  +   + EAL LF+ ++  +   ++ 
Sbjct: 338 RKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVI 397

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ ++ GLCK+GR   A+++F  + +     + +T+ +M   +   GK DK   +F+DM
Sbjct: 398 TYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457

Query: 367 EAKG 370
             KG
Sbjct: 458 VYKG 461



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 2/314 (0%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K +    DV  Y  ++     A  + EA R F   +    +P++ +F++I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
             A + L  M  +G+ P+   YN ++ G+C  GRV RA   F  M    CK NV +Y+ +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING CK  +I+ A+ L++ +    + P   TY+TL  GL +  ++E A K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK-SGRLKIAW 325
             D  AY    DG CK   + EALE+ +T+    C+  + +Y+C+I+G+C+   R++ A+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
            LF  +       + VTY  MI  L    ++ +  +LF  M   G++PD  A+++L+   
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 386 IRNNETSKVVELLH 399
           ++  +  +   +L 
Sbjct: 335 VKVRKLDEAKSILQ 348



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 2/245 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G R + + Y  L+       R   A   F       C+ +++S++I+I  +C  +   
Sbjct: 37  QEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPG 96

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A      M S GI P V  YN +  G  ++ +V RA   F +M +     +   Y T I
Sbjct: 97  RAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVI 155

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           +GLCK G I  A+ LF  L     + D  +YS L+ GLC++ RL+ A +++  +      
Sbjct: 156 NGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYD 215

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNETSKVVE 396
            D   YN M    C + ++D+A ++   M  +G  P  V +N ++ G C   N   +   
Sbjct: 216 GDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYR 275

Query: 397 LLHRM 401
           L  +M
Sbjct: 276 LFQQM 280



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 184 AKELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           A++ F  S +  G +H+V+ Y+ L++   + +    A+  +   L    +P++ ++  + 
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +    RA++    M+  G+  D  AY   + G C  G +  AL  F  +    C+
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCK 145

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD---KA 359
            ++ +Y+ +I+GLCK G++  A  LF  LP  ++  D  TY+ ++H LC   +++   K 
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +D+ L+    G   D  A+N +  G  +     + +E+L  M +R
Sbjct: 206 YDMMLEANYDG---DAGAYNAMADGFCKERRVDEALEVLKTMIQR 247


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 208/435 (47%), Gaps = 45/435 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   +   GC P+ + Y T+I+ LC  G    A  L +EM      F + C  D  
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM------FLMGCSADVN 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  I+ GLC  G + +A  L+ +M  +   P+ +TY  +++G C A+   EA+     M
Sbjct: 244 TFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR----TM 299

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV F+ ++     +GK++EA++L E M   G  P+A  Y+ L+ G C  GR+
Sbjct: 300 LGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRL 359

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN---------------------------- 213
             A +L   ME  G   ++ +Y+IL++ +C+N                            
Sbjct: 360 GSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGM 419

Query: 214 -------KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                  + ++ A+    EM S+G KP + TYNT+   L   +Q+E A  LF+ +   GV
Sbjct: 420 ICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGV 479

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            A+   Y T I  L +NG   +A+ L   + +  C LDI SY+ LI  LC+ G +  +  
Sbjct: 480 VANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIM 539

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           L   +    +  + V+YN++I  LC   ++  A +L  +M  + + PD V +NTL+ G  
Sbjct: 540 LLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLC 599

Query: 387 RNNETSKVVELLHRM 401
           +       + LL ++
Sbjct: 600 KMGWMHAALNLLEKL 614



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 193/388 (49%), Gaps = 10/388 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P   T+S     LCR G    AL +   M          C PD V+Y T+I  LC +G V
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHG------CVPDTVLYQTVIHALCAQGGV 223

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           ++A  LL +M     + DV T+N ++ G C      EA RL   MM +G  PN +T+  +
Sbjct: 224 NEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFL 283

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC   ++EEA  +L  + ++    N  ++NT++    L G++  A EL+ +M S GC
Sbjct: 284 LKGLCLASQVEEARTMLGRVPEL----NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGC 339

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
             +  +YSILI+G CK   +  A+ L  EM  KG  P++VTY  L          +    
Sbjct: 340 PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + + M   G++ +   Y   I  +CK+  + +A+   + ++    + DI +Y+ +I  LC
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            + +++ A  LF +L    ++A+ +TYN +IHAL  +G    A  L  DM   G + D V
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++N L+    R+    + + LL  M E+
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEK 547



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 192/400 (48%), Gaps = 29/400 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH--------------------TIVALNL 41
           EAA L  ++   GC PN ITY  L+ GLC                        T++   L
Sbjct: 260 EAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCL 319

Query: 42  FE-------EMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
            +       E+    G  G  C PDA  Y+ +I GLCK G +  A +LL +M+DK   P 
Sbjct: 320 LDGKLKEAAELYETMGSKG--CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPS 377

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           +VTY  ++  FC     +  + +   M D+G+  N+  ++ ++  +CK+ +M++A + ++
Sbjct: 378 IVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQ 437

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G +P+   YNT++   C   ++  A+ LF ++   G   N  +Y+ LI+   +N 
Sbjct: 438 EMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNG 497

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             + A+SL ++M+  G    +V+YN L   L     V+R+  L  EM   G+  +  +Y 
Sbjct: 498 SWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYN 557

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             I  LCK   + +ALEL + +   +   DI +Y+ LI+GLCK G +  A  L   L   
Sbjct: 558 LLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 617

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
            + AD++TYNI+I   C    +  A  L       G+ P+
Sbjct: 618 DVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPN 657



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 6/329 (1%)

Query: 78  KAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSV 135
           +A  LL Q+  +  ++P   +YN+V+  F  A+   +   L+  M+ +  V P   TFS+
Sbjct: 118 RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSI 177

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
               LC+ G+ +EA  +L  M + G  P+  +Y T++   C  G VN A  L   M  MG
Sbjct: 178 AARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  +V +++ +++G C    +  A  L   M+ +G  P  +TY  L  GL    QVE A 
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +   +    V      + T I     +G + EA EL+ T+    C  D  +YS LI GL
Sbjct: 298 TMLGRVPELNVV----LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGL 353

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GRL  A +L   +        +VTY I++H+ C +G  D    +   M  KG++ + 
Sbjct: 354 CKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNL 413

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +N ++    ++      +  +  M  +
Sbjct: 414 EGYNGMICAVCKDRRMDDAMRFMQEMKSQ 442



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 36/205 (17%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
           SY+ ++  + +       LSLY  M+ +  + PT  T++     L  + + + A  +   
Sbjct: 138 SYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRS 197

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M RHG   DT  Y+T I  LC  G + EA  L   + ++ C                   
Sbjct: 198 MARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCS------------------ 239

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
                            ADV T+N ++H LC  G++ +A  L   M  +G  P+ + +  
Sbjct: 240 -----------------ADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGF 282

Query: 381 LMLGCIRNNETSKVVELLHRMDERN 405
           L+ G    ++  +   +L R+ E N
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPELN 307


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF K    G      T S L+NGLC+ G   +A  + + ++N     G+V  P  VIY 
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 242

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G C+ G ++ A     QMK ++I PD +TYN++I G C A     A+ L +EM D 
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 302

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V TF+ ++D   + G++E+   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P++VTYN L  G
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +AL+L + +     +  
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y  LI GL  +GRL     L+  + +  ++     +NIM+ A    G   KA DL  
Sbjct: 483 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 542

Query: 365 DMEAK 369
           +M  K
Sbjct: 543 EMLQK 547



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEP-NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +  ++   G  P N  +Y+ +I G+ R G    A+ +F+EM     E  V+  P+ 
Sbjct: 45  EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT----ERAVL--PNH 98

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+IDG  K G ++    L  QM    + P+ +TYN ++ G C A    E   L  E
Sbjct: 99  ITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDE 158

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  Q + P+  T+S++ D L +NG  +    L    ++ GV    +  + L++G C  G+
Sbjct: 159 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 218

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A+E+  S+ + G       Y+ LINGYC+  E+EGA S + +M S+ IKP  +TYN 
Sbjct: 219 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 278

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++  A  L  EMQ +GV      + T ID   + G + +   +   ++   
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ SY  +++  CK+G++  A  +   +    ++ +   YN +I A    G  D+A 
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M++ G++P  V +N L+ G    ++ S+  E+++ +
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 439



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG-VVCKPDA 60
           E +AL  ++ +    P+  TYS L +GL R G +   L+LF + +      G   C    
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC---- 206

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +++GLCK+G V  A+E+L  + +  + P  V YN++I G+C   +   A   F +
Sbjct: 207 ---SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++P+ +T++ +++ LCK  ++  A  LL  M   GV P    +NTL+D +  TG+
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P    YN 
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   +
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY+ LI   C  G +  A +L   + +  + + V TY+ +I  L   G++++  
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+  M    V P     N ++
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMV 525



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 3/264 (1%)

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH-NVFS 202
           G+  +  +   ++   G RP+ F +N  +      G +  A  +   M   G    N FS
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+++I G  +      A+ ++ EM  + + P  +TYNT+  G  +   +E  F+L D+M 
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLK 322
            HG+  +   Y   + GLC+ G + E   L   +   K   D  +YS L DGL ++G  K
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 323 IAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
               LF   L  GV I D  T +I+++ LC DGK+  A ++   +   G+ P  V +NTL
Sbjct: 186 AMLSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  +  E         +M  R+
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRH 268



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+K+ G  P+++TY+ LI GLC       A    EE+IN      ++  PDAV
Sbjct: 396 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLI--PDAV 449

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I   C  G +DKA +L  +M    I   V TY+ +I G   A   NE + L+ +M
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M   V P+    +++++   K G   +A  L + M+Q
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF K    G      T S L+NGLC+ G   +A  + + ++N     G+V  P  VIY 
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 379

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G C+ G ++ A     QMK ++I PD +TYN++I G C A     A+ L +EM D 
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V TF+ ++D   + G++E+   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P++VTYN L  G
Sbjct: 500 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +AL+L + +     +  
Sbjct: 560 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 619

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y  LI GL  +GRL     L+  + +  ++     +NIM+ A    G   KA DL  
Sbjct: 620 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 679

Query: 365 DMEAK 369
           +M  K
Sbjct: 680 EMLQK 684



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEP-NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +  ++   G  P N  +Y+ +I G+ R G    A+ +F+EM     E  V+  P+ 
Sbjct: 182 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT----ERAVL--PNH 235

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+IDG  K G ++    L  QM    + P+ +TYN ++ G C A    E   L  E
Sbjct: 236 ITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDE 295

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  Q + P+  T+S++ D L +NG  +    L    ++ GV    +  + L++G C  G+
Sbjct: 296 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 355

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A+E+  S+ + G       Y+ LINGYC+  E+EGA S + +M S+ IKP  +TYN 
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 415

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++  A  L  EMQ +GV      + T ID   + G + +   +   ++   
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ SY  +++  CK+G++  A  +   +    ++ +   YN +I A    G  D+A 
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M++ G++P  V +N L+ G    ++ S+  E+++ +
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 576



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG-VVCKPDA 60
           E +AL  ++ +    P+  TYS L +GL R G +   L+LF + +      G   C    
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC---- 343

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +++GLCK+G V  A+E+L  + +  + P  V YN++I G+C   +   A   F +
Sbjct: 344 ---SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 400

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++P+ +T++ +++ LCK  ++  A  LL  M   GV P    +NTL+D +  TG+
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P    YN 
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   +
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY+ LI   C  G +  A +L   + +  + + V TY+ +I  L   G++++  
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+  M    V P     N ++
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMV 662



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 139/296 (46%), Gaps = 5/296 (1%)

Query: 114 AKRLFIEMMDQGVQP--NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           A RL  ++ D+   P  ++ + +++++ L   G+  +  +   ++   G RP+ F +N  
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +      G +  A  +   M   G    N FSY+++I G  +      A+ ++ EM  + 
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P  +TYNT+  G  +   +E  F+L D+M  HG+  +   Y   + GLC+ G + E  
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS-LPRGVLIADVVTYNIMIHA 349
            L   +   K   D  +YS L DGL ++G  K    LF   L  GV I D  T +I+++ 
Sbjct: 291 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY-TCSILLNG 349

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LC DGK+  A ++   +   G+ P  V +NTL+ G  +  E         +M  R+
Sbjct: 350 LCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+K+ G  P+++TY+ LI GLC       A    EE+IN      ++  PDAV
Sbjct: 533 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLI--PDAV 586

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I   C  G +DKA +L  +M    I   V TY+ +I G   A   NE + L+ +M
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M   V P+    +++++   K G   +A  L + M+Q
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 205/409 (50%), Gaps = 16/409 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV------ 55
           +A  LF  +   G +PNV+TY+ LI+G C+ G    A  ++  M  G+ E   +      
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYFKL 599

Query: 56  ----CK-PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAND 110
               C+ P+ + Y  ++DGLCK   V++A ELL  M      P+ + Y+++I GFC    
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659

Query: 111 SNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNT 170
              A+ +F++M ++G  PN+ T+S +++ L K  +++   ++L  M++    PN  +Y  
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719

Query: 171 LMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+   A  L + ME +GC  NV +Y+ +I+G+ K  +IE  L LY +M SKG
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
             P  +TY  L         ++ A +L DEM++        +YR  I+G   N   + ++
Sbjct: 780 CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSI 837

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR--GVLIADVVTYNIMIH 348
            L   L   +       Y  LID   K+GRL+ A  L   +     + +A+   Y  +I 
Sbjct: 838 GLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIE 897

Query: 349 ALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +L    K+DKA +L+  M  K V P+   F  L+ G  R  +  + ++L
Sbjct: 898 SLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 208/452 (46%), Gaps = 51/452 (11%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRT----GHTIVAL--NLFEEMIN--------- 47
           A  LF K+   GC+P  + Y+  I  +C      G  ++ L    + EM++         
Sbjct: 361 AYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVN 420

Query: 48  ---------GNGEFG----VVCK-------PDAVIYTTIIDGLCKEGFVDKAKELLLQMK 87
                    G G+F     ++C+       PD   Y+ +I  LC    V+KA  L  +MK
Sbjct: 421 VSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMK 480

Query: 88  DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              I P V TY  +I  FC A    +A+  F EM+     PNVVT++ ++    K  K+ 
Sbjct: 481 KNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVF 540

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME--------------- 192
           +A++L E+M+  G +PN   Y  L+DG C  G++++A +++  M+               
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLD 600

Query: 193 SMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              C+  N+ +Y  L++G CK   +E A  L   M   G +P  + Y+ L  G  +  ++
Sbjct: 601 DNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKL 660

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           E A ++F +M   G   + + Y + I+ L K   +   L++   +    C  ++  Y+ +
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           IDGLCK G+ + A+ L   +       +V+TY  MI      GK+++  +L+ DM +KG 
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGC 780

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           AP+ + +  L+  C       +   LL  M +
Sbjct: 781 APNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 28/412 (6%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCK- 72
           GC PN   +++L++  C++     A  LF++MI         C+P  ++Y   I  +C  
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLLYNIFIGSICSN 390

Query: 73  -----EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
                   ++ A++   +M D  +  + V  ++  R  C A   ++A  +  EMM +G  
Sbjct: 391 EELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+  T+S ++  LC   K+E+A  L E M + G+ P+ + Y  L+D FC  G + +A+  
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           F  M    C  NV +Y+ LI+ Y K +++  A  L+  ML +G KP VVTY  L  G  +
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 248 IHQVERAFKLFDEMQRHGVAAD----------------TWAYRTFIDGLCKNGYIVEALE 291
             Q+++A +++  MQ    ++D                   Y   +DGLCK   + EA E
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           L  T+ +  CE +   Y  LIDG CK+G+L+ A E+F  +       ++ TY+ +I++L 
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            + ++D    +   M      P+ V +  ++ G  +  +T +   L+ +M+E
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEE 742



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 174/399 (43%), Gaps = 15/399 (3%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +LK FG + +  TY+ LI    R      A  +  EM N           D         
Sbjct: 195 RLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRM------DGCTLGCFAY 248

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            LCK G    A  LL   + +   PD V YN ++ G C A+   EA  +   M      P
Sbjct: 249 SLCKAGRCGDALSLL---EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           NVVT+ +++      G++    ++L +M+  G  PN  ++N+L+  +C +   + A +LF
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEG------ALSLYSEMLSKGIKPTVVTYNTLF 242
             M   GC+     Y+I I   C N+E+ G      A   YSEML  G+    V  +   
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             L    + ++AF++  EM   G   D   Y   I  LC    + +A  LF  ++     
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             + +Y+ LID  CK+G ++ A   F  + R     +VVTY  +IHA     K+  A+ L
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M  +G  P+ V +  L+ G  +  +  K  ++  RM
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 155/340 (45%), Gaps = 47/340 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L   +   GCEPN I Y  LI+G C+TG    A  +F +M     E G    P+  
Sbjct: 627 EAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKM----SERGYC--PNLY 680

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++I+ L KE  +D   ++L +M + +  P+VV Y  +I G C    + EA RL ++M
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV+T++ ++D   K GK+E+  +L   M   G  PN   Y  L++  C TG +
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLL 800

Query: 182 NRAKELFVSMESMGCKHNVFSYS---------------------------------ILIN 208
           + A  L   M+      ++ SY                                  ILI+
Sbjct: 801 DEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILID 860

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVT-----YNTLFIGLFEIHQVERAFKLFDEMQR 263
            + K   +EGAL+L  E+ S    P++       Y +L   L    +V++AF+L+  M  
Sbjct: 861 NFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKVDKAFELYASMIN 917

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
             V  +   +   I GL + G   EAL+L  ++  + C +
Sbjct: 918 KNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHV 957



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 42/320 (13%)

Query: 96  VTYNSVIRGFC--YANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           V YN++I   C    N+   + +  +++ D   +      + ++ + C+NG    A + L
Sbjct: 134 VVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEEL 193

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----KELFVSMESM-GCKHNVFSYSI--- 205
             +   G + +   YN L+  F    +++ A    +E+  S   M GC    F+YS+   
Sbjct: 194 GRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKA 253

Query: 206 ------------------------LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
                                   +++G C+    + A+ +   M S    P VVTY  L
Sbjct: 254 GRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRIL 313

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     Q+ R  ++   M   G   +   + + +   CK+     A +LF+ +    C
Sbjct: 314 LSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGC 373

Query: 302 ELDIRSYSCLIDGLCK------SGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADG 354
           +     Y+  I  +C       S  L++A + +   L  GV++  V   N     LC  G
Sbjct: 374 QPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA-RCLCGAG 432

Query: 355 KMDKAHDLFLDMEAKGVAPD 374
           K DKA ++  +M +KG  PD
Sbjct: 433 KFDKAFEIICEMMSKGFVPD 452



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 9/248 (3%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTG----RVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           QIG      VYN L++  C       RV+    + +  +       + ++  LI   C+N
Sbjct: 126 QIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRN 183

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                AL     +   G K +  TYN L        +++ AF +  EM   G   D    
Sbjct: 184 GMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTL 243

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
             F   LCK G   +AL L      +    D   Y+ ++ GLC++   + A ++   +  
Sbjct: 244 GCFAYSLCKAGRCGDALSLLEKEEFVP---DTVFYNRMVSGLCEASLFQEAMDILDRMRS 300

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
              I +VVTY I++      G++ +   +   M  +G  P+   FN+L+    ++ + S 
Sbjct: 301 ISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSY 360

Query: 394 VVELLHRM 401
             +L  +M
Sbjct: 361 AYKLFKKM 368


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 10/407 (2%)

Query: 2   EAAALFTKLKA--FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
            A  +F+ L +      P+  +YS +I  LCR+G    AL LF++M + +G       PD
Sbjct: 92  SALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYL-----PD 146

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           AV ++ +       G +D A  LL +        +   YN+++        + +A  LF 
Sbjct: 147 AVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFE 206

Query: 120 EMMDQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +  G+  P+  +F+V++  +C+ G  ++A +L+E M + G  P+   +N L+DG C  
Sbjct: 207 SWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRA 266

Query: 179 GRVNRAKELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            +VNR  +L   ++  G C  NV +Y+ +I+GYCK   +E ALS+Y++ML  G +P  VT
Sbjct: 267 KQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVT 326

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YN L  G  +   +E A +++ ++       D   + + IDG C+ G + +A+ +++ + 
Sbjct: 327 YNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMG 386

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP-RGVLIADVVTYNIMIHALCADGKM 356
               + ++ ++S +I  LCK  R   A      L  R  +      YN +I  LC  G++
Sbjct: 387 QHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQV 446

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           ++A+ +  DME KG  PD   +  L++G        + + L H+M E
Sbjct: 447 EEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVE 493



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 176/364 (48%), Gaps = 7/364 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L TK   FG       Y+ L+N L   G    A+ LFE  I  +G +     PD   
Sbjct: 166 AVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQ-DGLY----SPDGWS 220

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I G+C+ G   KA EL+ +M +   +PD +T+N ++ G C A   N    L   + 
Sbjct: 221 FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQ 280

Query: 123 DQGV-QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             GV  PNVVT++ ++   CK G+ME+A  +   M++ G RPN   YN L++G+     +
Sbjct: 281 RDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDM 340

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  ++  +    C  +V ++S LI+GYC+  +++ A+ ++ EM    I+P V T++ +
Sbjct: 341 ESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSII 400

Query: 242 FIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
              L + ++   A     E+  R  +A  T+ Y   ID LCK G + EA  +   +    
Sbjct: 401 IHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKG 460

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C  D  +Y+ LI G C  GR+  A  LFH +       D +T N  I  +   G  ++  
Sbjct: 461 CHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVD 520

Query: 361 DLFL 364
            + L
Sbjct: 521 QIML 524



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 134/276 (48%), Gaps = 41/276 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++  FGC P+ IT++ L++GLCR        +L   +         VC P+ V
Sbjct: 236 KALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG-----VCMPNVV 290

Query: 62  IYTTIIDGLCKEGF-----------------------------------VDKAKELLLQM 86
            YT++I G CK G                                    ++ A  +  Q+
Sbjct: 291 TYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQL 350

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             +   PDVVT++S+I G+C     ++A R++ EM    +QPNV TFS+I+  LCK  + 
Sbjct: 351 ILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRS 410

Query: 147 EEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
            EA   L EL ++  + P  F+YN ++D  C  G+V  A  +   ME  GC  + ++Y+I
Sbjct: 411 AEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTI 470

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           LI G+C    I  A++L+ +M+  G +P  +T N+ 
Sbjct: 471 LIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSF 506



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 36/324 (11%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ-GVQPNVVTFSVIMDELCK 142
           L     ++ P   +Y+ VI   C +    +A +LF +M DQ G  P+ V FS +      
Sbjct: 100 LHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTN 159

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            G ++ A  LL    Q G R   + YN L++     GR   A  LF S    G       
Sbjct: 160 AGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDG------- 212

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
                              LYS        P   ++N +  G+  +   ++A +L + M 
Sbjct: 213 -------------------LYS--------PDGWSFNVVIKGVCRVGNFQKALELVERMT 245

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRL 321
             G + DT  +   +DGLC+   +    +L R L R   C  ++ +Y+ +I G CK+GR+
Sbjct: 246 EFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRM 305

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           + A  +++ +       + VTYN++I+       M+ A  ++  +  +   PD V F++L
Sbjct: 306 EDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSL 365

Query: 382 MLGCIRNNETSKVVELLHRMDERN 405
           + G  R  +    + +   M + +
Sbjct: 366 IDGYCRCGQLDDAMRIWKEMGQHH 389



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  + T ++  GC P+  TY+ LI G C  G    A+ LF +M+    E G  C+PD +
Sbjct: 448 EANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMV----ETG--CRPDKI 501

Query: 62  IYTTIIDGLCKEGFVDKAKELLL 84
              + I  + K G  ++  +++L
Sbjct: 502 TVNSFISCVLKAGMPNEVDQIML 524


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGH--TIVALNLFEEMINGNGEFGVVCKPD 59
           EA A+F  L   G +P +ITY+TL+  L R     +I AL L +   NG        KPD
Sbjct: 78  EAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPAL-LSKVADNG-------MKPD 129

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           +++   +I+     G VD+A ++  +MK+    P   TYN++I+GF       E+ +L +
Sbjct: 130 SILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKL-L 188

Query: 120 EMM--DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           EMM  D+ V+PN  T+++++   C   K+EEA  +L  M+  G++P+   YNT+   +  
Sbjct: 189 EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQ 248

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G   +A+ L + M+    K N  +  I+I+GYCK   +  AL     M   G+ P  V 
Sbjct: 249 NGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVV 308

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +N+L  G  +        +    M+  G+  D   + T ++     G +    E+F  + 
Sbjct: 309 FNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMV 368

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E DI +YS L  G  ++G+ + A  L  S+ +  +  +VV +  +I   CA GKMD
Sbjct: 369 KAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMD 428

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +A  L   M   G +P+   + TL+ G     +  K  E+L  M+ER
Sbjct: 429 RAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEER 475



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 179/362 (49%), Gaps = 5/362 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F K+K +GC+P   TY+TLI G    G    ++ L E M  G  E     KP+  
Sbjct: 148 EAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMM--GQDEN---VKPNDR 202

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I   C +  +++A  +L +M    I PDVVTYN++ R +    ++ +A+RL ++M
Sbjct: 203 TYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKM 262

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+PN  T  +I+   CK G M EA + L  M ++GV PN  V+N+L+ G+      
Sbjct: 263 QYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDT 322

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N   E    ME  G K +V ++S ++N +     ++    ++++M+  GI+P +  Y+ L
Sbjct: 323 NGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSIL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G     Q  +A  L   M ++GV  +   + T I G C  G +  A  L   +  +  
Sbjct: 383 AKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGT 442

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             ++++Y  LI G  ++ +   A E+  ++    ++ ++ T  ++  A  A G   +A+ 
Sbjct: 443 SPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANR 502

Query: 362 LF 363
           + 
Sbjct: 503 IL 504



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 169/341 (49%), Gaps = 1/341 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           T +++ L  +G   +A+ +   + ++   P ++TY +++              L  ++ D
Sbjct: 64  TKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 123

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G++P+ +  + +++    +GK++EA ++ + M + G +P    YNTL+ GF + GR   
Sbjct: 124 NGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYE 183

Query: 184 AKELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           + +L   M +    K N  +Y+ILI  +C  K++E A ++  +M++ GI+P VVTYNT+ 
Sbjct: 184 SMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMA 243

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +  + E+A +L  +MQ + V  +       I G CK G + EAL     ++ L   
Sbjct: 244 RAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVH 303

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +   ++ LI G   +       E    +    +  DVVT++ +++A  + G MD   ++
Sbjct: 304 PNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEI 363

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F DM   G+ PD  A++ L  G +R  +  K   LL  M +
Sbjct: 364 FNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSK 404


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 166/316 (52%), Gaps = 4/316 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  +    GC P+V +Y+ L+  LC  G +  A NL   M  G    G VC PD V Y T
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEG----GTVCSPDVVAYNT 190

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +IDG  KEG V+KA +L  +M  + I PD+VTYNSV+   C A   ++A+    +M+++ 
Sbjct: 191 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 250

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN  T++ ++      G+ +EA ++ + M +  + P+    + LM   C  G++  A+
Sbjct: 251 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 310

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           ++F +M   G   +VFSY+I++NGY     +     L+  ML  GI P   T+N      
Sbjct: 311 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAY 370

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
                +++A  +F+EM+ HGV  D   YRT I  LC+ G + +A+E F  +       D 
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430

Query: 306 RSYSCLIDGLCKSGRL 321
            +Y+CLI G C  G L
Sbjct: 431 YAYNCLIQGFCTHGIL 446



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 174/362 (48%), Gaps = 7/362 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A A F +L   G   + I  S L+ G C    T  AL++   +++   E G  C PD   
Sbjct: 96  ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI---LLHRTPELG--CVPDVFS 150

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNI--NPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           Y  ++  LC +G   +A  LL  M +     +PDVV YN+VI GF    D N+A  LF E
Sbjct: 151 YNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 210

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P++VT++ ++  LCK   M++A   L  M+   V PN + YN L+ G+  TG+
Sbjct: 211 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 270

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              A  +F  M       +V + S+L+   CK  +I+ A  ++  M  KG  P V +YN 
Sbjct: 271 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 330

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G      +     LFD M   G+A D + +   I      G + +A+ +F  +R   
Sbjct: 331 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG 390

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D+ +Y  +I  LC+ G++  A E F+ +    +  D   YN +I   C  G + K  
Sbjct: 391 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQ 450

Query: 361 DL 362
            +
Sbjct: 451 GI 452



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 174/350 (49%), Gaps = 3/350 (0%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           V  P +  Y  ++D   +    + A     Q+    +  D +  + +++GFC A  ++EA
Sbjct: 72  VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 131

Query: 115 KRLFIEMMDQ-GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGV--RPNAFVYNTL 171
             + +    + G  P+V ++++++  LC  GK  +A  LL +M + G    P+   YNT+
Sbjct: 132 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTV 191

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DGF   G VN+A +LF  M   G   ++ +Y+ +++  CK + ++ A +   +M++K +
Sbjct: 192 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 251

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P   TYN L  G     Q + A ++F EM+RH +  D       +  LCK G I EA +
Sbjct: 252 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 311

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +F T+ +     D+ SY+ +++G    G L    +LF  +    +  D  T+N+ I A  
Sbjct: 312 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYA 371

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             G +DKA  +F +M   GV PD V + T++    R  +    +E  ++M
Sbjct: 372 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 421



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 42/305 (13%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF ++   G  P+++TY+++++ LC                               
Sbjct: 203 KACDLFKEMVQRGIPPDLVTYNSVVHALC------------------------------- 231

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
                     K   +DKA+  L QM +K + P+  TYN++I G+       EA R+F EM
Sbjct: 232 ----------KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 281

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+VVT S++M  LCK GK++EA  + + M   G  P+ F YN +++G+   G +
Sbjct: 282 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 341

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M   G   + +++++ I  Y     ++ A+ +++EM   G+KP VVTY T+
Sbjct: 342 VDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-FRTLRILK 300
              L  I +++ A + F++M   GVA D +AY   I G C +G +++   + F    I+ 
Sbjct: 402 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMA 461

Query: 301 CELDI 305
             LDI
Sbjct: 462 LHLDI 466



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 41/193 (21%)

Query: 219 ALSLYSEMLSKG-----IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           A++L++   S+      + PT  TY  L       H+ E A   F ++ R G+  D    
Sbjct: 56  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 115

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
              + G C+     EAL++                                  L H  P 
Sbjct: 116 SHLLKGFCEAKRTDEALDI----------------------------------LLHRTPE 141

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV--APDCVAFNTLMLGCIRNNET 391
              + DV +YNI++ +LC  GK  +A +L   M   G   +PD VA+NT++ G  +  + 
Sbjct: 142 LGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 201

Query: 392 SKVVELLHRMDER 404
           +K  +L   M +R
Sbjct: 202 NKACDLFKEMVQR 214


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 202/397 (50%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +++A G  PNV +Y+  I  L + G    A  +  +M     E G  CKPD V  T
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM----EEEG--CKPDVVTNT 280

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I  LC  G +  AK++  +MK  +  PD VTY +++     + DS     ++  +   
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   NVV+++  +D LC+ G+++EA  + + M Q G+ P  + YN+L+ GF    R NRA
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ELF  M   G   N +++ + IN + K+ E   AL  Y  M SKGI P VV  N +  G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  ++  A ++F E++  G++ D   Y   I    K     EA+++F  +   +C  D
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + + + LID L K+GR   AW++F+ L    L     TYN ++  L  +GK+ +   L  
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M +    P+ + +NT++    +N E +  +++L+ M
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 210/454 (46%), Gaps = 80/454 (17%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
            E   L   + +    PN+ITY+T+++ LC+ G    AL++   M +NG       C PD 
Sbjct: 574  EVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG-------CMPDL 626

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA---KRL 117
              Y T++ GL KE  +D+A  +  QMK K + PD  T  +++  F  +    EA    R 
Sbjct: 627  SSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685

Query: 118  FIEMMDQGVQ------------------------PNVVTFSVIMDEL---------CKNG 144
            +I   D  V                          N+ +  +++D+L         CK+ 
Sbjct: 686  YILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHK 745

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            +   A +L++    +GV      YN L+ G      ++ A+ELF  M+ +GC  + F+Y 
Sbjct: 746  EALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH 805

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ++++   K+  IE  L +  EM +KG K T VTYNT+  GL +   ++ A  L+ ++   
Sbjct: 806  LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTL-------------------RILK----- 300
            G +     Y   +DGL K+G I +A  LF  +                   RI       
Sbjct: 866  GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925

Query: 301  CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            CEL           DI+SY+ +ID LC  GRL      F  L    L  D++TYN++IH 
Sbjct: 926  CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985

Query: 350  LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            L   G++++A  L+ DME KG+AP+   +N+L+L
Sbjct: 986  LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 210/431 (48%), Gaps = 33/431 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA  +  K++  GC+P+V+T + LI  LC  G    A ++F +M   +            
Sbjct: 259 EAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLL 318

Query: 50  ------------GEFGVVCKPDA-----VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                        E     K D      V YT  +D LC+ G VD+A ++  +MK K I 
Sbjct: 319 DKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGII 378

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   +YNS+I GF  A+  N A  LF  M   G  PN  T  + ++   K+G+  +A + 
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            ELM   G+ P+    N ++ G   TGR+  AK +F  +++MG   +  +Y+++I    K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               + A+ +++EM+     P V+  N+L   L++  +   A+K+F E++   +      
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL + G + E ++L   +       +I +Y+ ++D LCK+G +  A ++ +S+ 
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + D+ +YN +++ L  + ++D+A  +F  M+ K +APD     T++   +R   + 
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR---SG 674

Query: 393 KVVELLHRMDE 403
            + E LH + E
Sbjct: 675 LMKEALHTVRE 685



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 198/403 (49%), Gaps = 9/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ LI  L ++G    A+++++ M       GVV  P    
Sbjct: 155 APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAAD----GVV--PTVRT 208

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K    +    LL +M+ + + P+V +Y   IR    A    EA R+  +M 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+VVT +V++  LC  G++ +A  +   M     +P+   Y TL+D    +G   
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSR 328

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ ++++ G   NV SY+  ++  C+   ++ AL ++ EM  KGI P   +YN+L 
Sbjct: 329 SVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLI 388

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +  RA +LF+ M  HG   + + +  FI+   K+G  ++AL+ +  ++     
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL K+GRL +A  +FH L    +  D +TY +MI         D+A  +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 363 FLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVELLHRMD 402
           F +M     APD +A N+L   +    R NE  K+   L  M+
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 173/343 (50%), Gaps = 6/343 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            + A  L  K +  G      +Y+ LI GL       +A  LF EM        + C PD 
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR------LGCDPDE 801

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  I+D + K   ++   ++  +M +K      VTYN++I G   +   +EA  L+ +
Sbjct: 802  FTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M +G  P   T+  ++D L K+G +E+A  L + M++ G  PN  +YN L++G+ + G 
Sbjct: 862  LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +  ELF SM   G   ++ SY+++I+  C +  +   LS + ++   G++P ++TYN 
Sbjct: 922  TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL +  ++E A  L+++M++ G+A + + Y + I  L K G   EA +++  L    
Sbjct: 982  LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + ++ +Y+ LI G   SG  + A+  +  +  G    +  TY
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 167/326 (51%)

Query: 59   DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            D +  + II  LCK      A EL+ + ++  ++    +YN++I G    +  + A+ LF
Sbjct: 730  DDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789

Query: 119  IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             EM   G  P+  T+ +I+D + K+ ++E+  ++ E M   G +     YNT++ G   +
Sbjct: 790  SEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKS 849

Query: 179  GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
              ++ A  L+  + S G      +Y  L++G  K+  IE A +L+ EML  G +P    Y
Sbjct: 850  KMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIY 909

Query: 239  NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            N L  G       E+  +LF+ M   G+  D  +Y   ID LC +G + + L  F+ L  
Sbjct: 910  NILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTD 969

Query: 299  LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +  E D+ +Y+ LI GL KSGRL+ A  L++ + +  +  ++ TYN +I  L   GK  +
Sbjct: 970  MGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAE 1029

Query: 359  AHDLFLDMEAKGVAPDCVAFNTLMLG 384
            A  ++ ++ AKG  P+   +N L+ G
Sbjct: 1030 AGKMYEELLAKGWKPNVFTYNALIRG 1055



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 41/436 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL +TG   +A  +F E+       G+   PD 
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL----KAMGI--SPDN 486

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++  +M +    PDV+  NS+I     A   NEA ++F E
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E  QLLE M      PN   YNT++D  C  G 
Sbjct: 547 LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-------------- 226
           VN A ++  SM   GC  ++ SY+ ++ G  K   ++ A  ++ +M              
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTI 666

Query: 227 --------LSKGIKPTVVTY-------------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   L K    TV  Y             ++L  G+ +    E++ +  + +   G
Sbjct: 667 LPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSG 726

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D       I  LCK+   + A EL +    L   L   SY+ LI GL     + IA 
Sbjct: 727 LLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAE 786

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ELF  + R     D  TY++++ A+    +++    +  +M  KG     V +NT++ G 
Sbjct: 787 ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 386 IRNNETSKVVELLHRM 401
           +++    + + L +++
Sbjct: 847 VKSKMLDEAINLYYQL 862



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 130/240 (54%), Gaps = 6/240 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  L+ +L + G  P   TY  L++GL + G+   A  LF+EM+    E G  C+P+  
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML----ECG--CEPNCA 907

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            IY  +++G    G  +K  EL   M ++ +NPD+ +Y  VI   C     N+    F ++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G++P+++T+++++  L K+G++EEA  L   M + G+ PN + YN+L+      G+ 
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +++  + + G K NVF+Y+ LI GY  +   E A + Y  M+  G +P   TY  L
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 164/382 (42%), Gaps = 11/382 (2%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKA 79
           R  HT  + N   E++  +G  G V            K +   + T+   +  EG +  A
Sbjct: 96  RVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSA 155

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              L  MK+  I  +  TYN +I     +    EA  ++  M   GV P V T+SV+M  
Sbjct: 156 PVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA 215

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             K    E    LL  M   GVRPN + Y   +      GR+  A  +   ME  GCK +
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPD 275

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V + ++LI   C    +  A  ++ +M +   KP  VTY TL     +        ++++
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            ++  G   +  +Y   +D LC+ G + EAL++F  ++         SY+ LI G  K+ 
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R   A ELF+ +       +  T+ + I+     G+  KA   +  M++KG+ PD VA N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            ++ G  +         + H +
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHEL 477



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 150/290 (51%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +  ++F  M  Q ++ NV TF  +   +   G +  A   L +M + G+  NA+ YN L+
Sbjct: 119 DVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLI 178

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                +G    A +++ +M + G    V +YS+L+  + K ++ E  + L  EM ++G++
Sbjct: 179 YFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVR 238

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V +Y      L +  ++E A+++  +M+  G   D       I  LC  G + +A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  ++    + D  +Y  L+D    SG  +   E++++L       +VV+Y   + ALC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            G++D+A D+F +M+ KG+ P   ++N+L+ G ++ +  ++ +EL + M+
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A ALF ++   GCEPN   Y+ L+NG    G T     LFE M+    E G+   PD  
Sbjct: 889  DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV----EQGM--NPDIK 942

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT +ID LC +G ++       Q+ D  + PD++TYN +I G   +    EA  L+ +M
Sbjct: 943  SYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM 1002

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G+ PN+ T++ ++  L K GK  EA ++ E ++  G +PN F YN L+ G+ ++G  
Sbjct: 1003 EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSP 1062

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              A   +  M   GC+ N  +Y  L N
Sbjct: 1063 ENAFAAYGRMIVGGCRPNSSTYMQLPN 1089



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 6/136 (4%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            + F +L   G EP++ITY+ LI+GL ++G    AL+L+ +M     + G+   P+   Y 
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM----EKKGIA--PNLYTYN 1015

Query: 65   TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++I  L K G   +A ++  ++  K   P+V TYN++IRG+  +     A   +  M+  
Sbjct: 1016 SLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVG 1075

Query: 125  GVQPNVVTFSVIMDEL 140
            G +PN  T+  + +++
Sbjct: 1076 GCRPNSSTYMQLPNQM 1091



 Score = 45.1 bits (105), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 7/191 (3%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYN---TLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWA 272
           E AL L+   LS   +P VV         + L   H +V    ++FD MQR  + A+   
Sbjct: 82  EEALELF---LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + T    +   G +  A      ++     L+  +Y+ LI  L KSG  + A +++ ++ 
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              ++  V TY++++ A       +    L  +MEA+GV P+  ++   +    +     
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258

Query: 393 KVVELLHRMDE 403
           +   +L +M+E
Sbjct: 259 EAYRILRKMEE 269



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)

Query: 252 ERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           E A +LF  + R   V   T +    ++ +  +G + +  ++F  ++    + ++ ++  
Sbjct: 82  EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCT 141

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +   +   G L+ A      +    ++ +  TYN +I+ L   G   +A D++  M A G
Sbjct: 142 VFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V P    ++ LML   +  +   VV LL  M+ R
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 202/397 (50%), Gaps = 6/397 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            L  +++A G  PNV +Y+  I  L + G    A  +  +M     E G  CKPD V  T
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM----EEEG--CKPDVVTNT 280

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +I  LC  G +  AK++  +MK  +  PD VTY +++     + DS     ++  +   
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   NVV+++  +D LC+ G+++EA  + + M Q G+ P  + YN+L+ GF    R NRA
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
            ELF  M   G   N +++ + IN + K+ E   AL  Y  M SKGI P VV  N +  G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +  ++  A ++F E++  G++ D   Y   I    K     EA+++F  +   +C  D
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + + + LID L K+GR   AW++F+ L    L     TYN ++  L  +GK+ +   L  
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            M +    P+ + +NT++    +N E +  +++L+ M
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 211/454 (46%), Gaps = 80/454 (17%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
            E   L   + +    PN+ITY+T+++ LC+ G    AL++   M +NG       C PD 
Sbjct: 574  EVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG-------CMPDL 626

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA---KRL 117
              Y T++ GL KEG +D+A  +  QMK K + PD  T  +++  F  +    EA    R 
Sbjct: 627  SSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEALHTVRE 685

Query: 118  FIEMMDQGVQ------------------------PNVVTFSVIMDEL---------CKNG 144
            +I   D  V                          N+ +  +++D+L         CK+ 
Sbjct: 686  YILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHK 745

Query: 145  KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
            +   A +L++    +GV      YN L+ G      ++ A+ELF  M+ +GC  + F+Y 
Sbjct: 746  EALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH 805

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ++++   K+  IE  L +  EM +KG K T VTYNT+  GL +   ++ A  L+ ++   
Sbjct: 806  LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE 865

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEALELFRTL-------------------RILK----- 300
            G +     Y   +DGL K+G I +A  LF  +                   RI       
Sbjct: 866  GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925

Query: 301  CEL-----------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            CEL           DI+SY+ +ID LC  GRL      F  L    L  D++TYN++IH 
Sbjct: 926  CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985

Query: 350  LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
            L   G++++A  L+ DME KG+AP+   +N+L+L
Sbjct: 986  LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 33/431 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN------------ 49
           EA  +  K++  GC+P+V+T + LI  LC  G    A ++F +M   +            
Sbjct: 259 EAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLL 318

Query: 50  ------------GEFGVVCKPDA-----VIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
                        E     K D      V YT  +D LC+ G VD+A ++  +MK K I 
Sbjct: 319 DKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGII 378

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   +YNS+I GF  A+  N A  LF  M   G  PN  T  + ++   K+G+  +A + 
Sbjct: 379 PQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKR 438

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            ELM   G+ P+    N ++ G   TGR+  AK +F  +++MG   +  +Y+++I    K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               + A+ +++EM+     P V+  N+L   L++  +   A+K+F E++   +      
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T + GL + G + E ++L   +       +I +Y+ ++D LCK+G +  A ++ +S+ 
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
               + D+ +YN +++ L  +G++D+A  +F  M+ K +APD     T++   +R   + 
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR---SG 674

Query: 393 KVVELLHRMDE 403
            + E LH + E
Sbjct: 675 LMKEALHTVRE 685



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 198/403 (49%), Gaps = 9/403 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A      +K  G   N  TY+ LI  L ++G    A+++++ M       GVV  P    
Sbjct: 155 APVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAAD----GVV--PTVRT 208

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++    K    +    LL +M+ + + P+V +Y   IR    A    EA R+  +M 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G +P+VVT +V++  LC  G++ +A  +   M     +P+   Y TL+D    +G   
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSR 328

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              E++ ++++ G   NV SY+  ++  C+   ++ AL ++ EM  KGI P   +YN+L 
Sbjct: 329 SVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLI 388

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G  +  +  RA +LF+ M  HG   + + +  FI+   K+G  ++AL+ +  ++     
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ + + ++ GL K+GRL +A  +FH L    +  D +TY +MI         D+A  +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 363 FLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVELLHRMD 402
           F +M     APD +A N+L   +    R NE  K+   L  M+
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 173/343 (50%), Gaps = 6/343 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            + A  L  K +  G      +Y+ LI GL       +A  LF EM        + C PD 
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR------LGCDPDE 801

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              Y  I+D + K   ++   ++  +M +K      VTYN++I G   +   +EA  L+ +
Sbjct: 802  FTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +M +G  P   T+  ++D L K+G +E+A  L + M++ G  PN  +YN L++G+ + G 
Sbjct: 862  LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
              +  ELF SM   G   ++ SY+++I+  C +  +   LS + ++   G++P ++TYN 
Sbjct: 922  TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L  GL +  ++E A  L+++M++ G+A + + Y + I  L K G   EA +++  L    
Sbjct: 982  LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
             + ++ +Y+ LI G   SG  + A+  +  +  G    +  TY
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 166/326 (50%)

Query: 59   DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            D +  + II   CK      A EL+ + ++  ++    +YN++I G    +  + A+ LF
Sbjct: 730  DDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789

Query: 119  IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             EM   G  P+  T+ +I+D + K+ ++E+  ++ E M   G +     YNT++ G   +
Sbjct: 790  SEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKS 849

Query: 179  GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
              ++ A  L+  + S G      +Y  L++G  K+  IE A +L+ EML  G +P    Y
Sbjct: 850  KMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIY 909

Query: 239  NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            N L  G       E+  +LF+ M   G+  D  +Y   ID LC +G + + L  F+ L  
Sbjct: 910  NILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTD 969

Query: 299  LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +  E D+ +Y+ LI GL KSGRL+ A  L++ + +  +  ++ TYN +I  L   GK  +
Sbjct: 970  MGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAE 1029

Query: 359  AHDLFLDMEAKGVAPDCVAFNTLMLG 384
            A  ++ ++ AKG  P+   +N L+ G
Sbjct: 1030 AGKMYEELLAKGWKPNVFTYNALIRG 1055



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 41/436 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A   +  +K+ G  P+V+  + ++ GL +TG   +A  +F E+       G+   PD 
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL----KAMGI--SPDN 486

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + YT +I    K    D+A ++  +M +    PDV+  NS+I     A   NEA ++F E
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  ++P   T++ ++  L + GK++E  QLLE M      PN   YNT++D  C  G 
Sbjct: 547 LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-------------- 226
           VN A ++  SM   GC  ++ SY+ ++ G  K   ++ A  ++ +M              
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTI 666

Query: 227 --------LSKGIKPTVVTY-------------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   L K    TV  Y             ++L  G+ +    E++ +  + +   G
Sbjct: 667 LPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSG 726

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +  D       I   CK+   + A EL +    L   L   SY+ LI GL     + IA 
Sbjct: 727 LLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAE 786

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           ELF  + R     D  TY++++ A+    +++    +  +M  KG     V +NT++ G 
Sbjct: 787 ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 386 IRNNETSKVVELLHRM 401
           +++    + + L +++
Sbjct: 847 VKSKMLDEAINLYYQL 862



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 130/240 (54%), Gaps = 6/240 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA  L+ +L + G  P   TY  L++GL + G+   A  LF+EM+    E G  C+P+  
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML----ECG--CEPNCA 907

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            IY  +++G    G  +K  EL   M ++ +NPD+ +Y  VI   C     N+    F ++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G++P+++T+++++  L K+G++EEA  L   M + G+ PN + YN+L+      G+ 
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
              A +++  + + G K NVF+Y+ LI GY  +   E A + Y  M+  G +P   TY  L
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 164/382 (42%), Gaps = 11/382 (2%)

Query: 31  RTGHTIVALNLFEEMINGNGEFGVVC-----------KPDAVIYTTIIDGLCKEGFVDKA 79
           R  HT  + N   E++  +G  G V            K +   + T+   +  EG +  A
Sbjct: 96  RVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSA 155

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
              L  MK+  I  +  TYN +I     +    EA  ++  M   GV P V T+SV+M  
Sbjct: 156 PVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA 215

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
             K    E    LL  M   GVRPN + Y   +      GR+  A  +   ME  GCK +
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPD 275

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V + ++LI   C    +  A  ++ +M +   KP  VTY TL     +        ++++
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
            ++  G   +  +Y   +D LC+ G + EAL++F  ++         SY+ LI G  K+ 
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R   A ELF+ +       +  T+ + I+     G+  KA   +  M++KG+ PD VA N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
            ++ G  +         + H +
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHEL 477



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 150/290 (51%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +  ++F  M  Q ++ NV TF  +   +   G +  A   L +M + G+  NA+ YN L+
Sbjct: 119 DVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLI 178

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                +G    A +++ +M + G    V +YS+L+  + K ++ E  + L  EM ++G++
Sbjct: 179 YFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVR 238

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V +Y      L +  ++E A+++  +M+  G   D       I  LC  G + +A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           F  ++    + D  +Y  L+D    SG  +   E++++L       +VV+Y   + ALC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            G++D+A D+F +M+ KG+ P   ++N+L+ G ++ +  ++ +EL + M+
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMN 408



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A ALF ++   GCEPN   Y+ L+NG    G T     LFE M+    E G+   PD  
Sbjct: 889  DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV----EQGM--NPDIK 942

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             YT +ID LC +G ++       Q+ D  + PD++TYN +I G   +    EA  L+ +M
Sbjct: 943  SYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM 1002

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G+ PN+ T++ ++  L K GK  EA ++ E ++  G +PN F YN L+ G+ ++G  
Sbjct: 1003 EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSP 1062

Query: 182  NRAKELFVSMESMGCKHNVFSYSILIN 208
              A   +  M   GC+ N  +Y  L N
Sbjct: 1063 ENAFAAYGRMIVGGCRPNSSTYMQLPN 1089



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 6/136 (4%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            + F +L   G EP++ITY+ LI+GL ++G    AL+L+ +M     + G+   P+   Y 
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDM----EKKGIA--PNLYTYN 1015

Query: 65   TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            ++I  L K G   +A ++  ++  K   P+V TYN++IRG+  +     A   +  M+  
Sbjct: 1016 SLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVG 1075

Query: 125  GVQPNVVTFSVIMDEL 140
            G +PN  T+  + +++
Sbjct: 1076 GCRPNSSTYMQLPNQM 1091



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 7/191 (3%)

Query: 217 EGALSLYSEMLSKGIKPTVVTYN---TLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWA 272
           E AL L+   LS   +P VV         + L   H +V    ++FD MQR  + A+   
Sbjct: 82  EEALELF---LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           + T    +   G +  A      ++     L+  +Y+ LI  L KSG  + A +++ ++ 
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              ++  V TY++++ A       +    L  +MEA+GV P+  ++   +    +     
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258

Query: 393 KVVELLHRMDE 403
           +   +L +M+E
Sbjct: 259 EAYRILRKMEE 269



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)

Query: 252 ERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           E A +LF  + R   V   T +    ++ +  +G + +  ++F  ++    + ++ ++  
Sbjct: 82  EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCT 141

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +   +   G L+ A      +    ++ +  TYN +I+ L   G   +A D++  M A G
Sbjct: 142 VFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V P    ++ LML   +  +   VV LL  M+ R
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 6/353 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           LK   C+P +ITY+ LI      G    AL L +EM++   E      PD   Y  I  G
Sbjct: 106 LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE------PDTFTYNVITRG 159

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCKEG VD+A E +  +  +   PDV+TYN ++R        +E ++   E+  +G +PN
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           VVT+S+++  LC++GK+EE+  L+++M + G+ P+A+ Y+ L+  FC  G+++ A E   
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M   G   ++ +Y+ ++   CKN   + A+ ++ ++   G  P V +YNT+   L+   
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
              RA  +  +M   G+  D   Y + I  LC++G + EA+ L   +   + + +I SY 
Sbjct: 340 DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ GLCK+ R+  A E+  ++       +  TY ++I  +   G   +A +L
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 198/390 (50%), Gaps = 9/390 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+V  Y+ +I+G C+      A  + + M            PD V +  +I   C +G 
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG------FSPDVVTHNIMIGTFCGKGK 94

Query: 76  VDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
           +D A ++  ++ KD N  P ++TY  +I  +      +EA +L  EM+ +G++P+  T++
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           VI   LCK GK++ A + +  +   G +P+   YN L+      G+ +  ++    + S 
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GC+ NV +YSILI+  C++ +IE +++L   M  KG+ P    Y+ L        +++ A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
            +  D M   G   D   Y T +  LCKNG    A+E+F  L  + C  ++ SY+ ++  
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 315 LCKSG-RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           L  SG R +    +   L +G+   DV+TYN +I  LC DG +D+A  L  DM +    P
Sbjct: 335 LWSSGDRYRALGMISQMLSKGI-DPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 393

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + V++ T++LG  + +     +E+L  M E
Sbjct: 394 NIVSYKTVLLGLCKAHRIDDAIEVLAAMIE 423



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 199/387 (51%), Gaps = 8/387 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+VI  + LI G   + +   A  +   ++  +G      KPD   Y  +I G CK   
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHG------KPDVFAYNAVISGFCKANR 59

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFS 134
           ++ AK +L +MK K  +PDVVT+N +I  FC     + A ++F E++ D   +P ++T++
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
           ++++     G ++EA +LL+ M+  G+ P+ F YN +  G C  G+V+RA E   ++ S 
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           GCK +V +Y+IL+       + +      SE+ S+G +P VVTY+ L   L    ++E +
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             L   M+  G+  D + Y   I   C+ G +  A+E    +       DI +Y+ ++  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK+G    A E+F  L       +V +YN M+ AL + G   +A  +   M +KG+ PD
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
            + +N+L+    R+    + + LL  M
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADM 386



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 170/330 (51%), Gaps = 6/330 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++ + G EP+  TY+ +  GLC+ G    A   F   +N  G     CKPD +
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE-FVRTLNSRG-----CKPDVI 186

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++  L  +G  D+ ++ + ++  +   P+VVTY+ +I   C      E+  L   M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+   +  ++   C+ GK++ A + L+ MI  G  P+   YNT+M   C  G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+F  ++ +GC  NV SY+ +++    + +   AL + S+MLSKGI P V+TYN+L
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L     V+ A  L  +M       +  +Y+T + GLCK   I +A+E+   +    C
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC 426

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
           + +  +Y+ LI+G+  SG    A EL +SL
Sbjct: 427 QPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 163/319 (51%), Gaps = 2/319 (0%)

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           M  K+  PDV+    +I+GF  + + ++A R+ + ++++  +P+V  ++ ++   CK  +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRV-MGILEKHGKPDVFAYNAVISGFCKANR 59

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM-ESMGCKHNVFSYS 204
           +E A  +L+ M + G  P+   +N ++  FC  G+++ A ++F  + +   CK  + +Y+
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILI  Y     I+ AL L  EMLS+G++P   TYN +  GL +  +V+RAF+    +   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G   D   Y   +  L   G   E  +    +    CE ++ +YS LI  LC+ G+++ +
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L   +    L  D   Y+ +I A C +GK+D A +    M   G  PD V +NT+M  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 385 CIRNNETSKVVELLHRMDE 403
             +N      VE+  ++DE
Sbjct: 300 LCKNGNGDHAVEIFGKLDE 318



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 153/290 (52%), Gaps = 6/290 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L + GC+P+VITY+ L+  L   G          E+      F   C+P+ V Y+ +I  
Sbjct: 176 LNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEI------FSRGCEPNVVTYSILISS 229

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LC++G ++++  L+  MK+K + PD   Y+ +I  FC     + A      M+  G  P+
Sbjct: 230 LCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPD 289

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
           +V ++ IM  LCKNG  + A ++   + ++G  PN   YNT++     +G   RA  +  
Sbjct: 290 IVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMIS 349

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M S G   +V +Y+ LI+  C++  ++ A+ L ++MLS   +P +V+Y T+ +GL + H
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +++ A ++   M  +G   +   Y   I+G+  +G   +A+EL  +L I+
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 126/250 (50%), Gaps = 2/250 (0%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+    +P+  +   L+ GF  +  +++A  +   +E  G K +VF+Y+ +I+G+CK   
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW-AYR 274
           IE A ++   M  KG  P VVT+N +        +++ A K+F+E+ +      T   Y 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 275 TFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRG 334
             I+     G I EAL+L   +     E D  +Y+ +  GLCK G++  A+E   +L   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 335 VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
               DV+TYNI++ AL   GK D+      ++ ++G  P+ V ++ L+    R+ +  + 
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 395 VELLHRMDER 404
           V L+  M E+
Sbjct: 240 VNLVKVMKEK 249


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 182/350 (52%), Gaps = 14/350 (4%)

Query: 12  AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGL 70
           + GC P++ TY+TLI GLC+ G+ + A  L  EM I G       C+P+ + YT +ID  
Sbjct: 7   SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG-------CEPNVITYTILIDRF 59

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CKEG +++A+ +L +M  K +  + V YN +I   C      +A  +F +M  +G +P++
Sbjct: 60  CKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 119

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            TF+ ++  LCK  K EEA  L + M+  GV  N   YNTL+  F   G +  A +L   
Sbjct: 120 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 179

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P  ++ N L  GL     
Sbjct: 180 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGN 239

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++ A +   +M   G+  D   Y + I+GLCK G   EAL LF  L++     D  +Y+ 
Sbjct: 240 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 299

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGV---LIADVVTYNIMIHALCADGKMD 357
           LI   CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 300 LISWHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 175/337 (51%)

Query: 54  VVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNE 113
           V C PD   Y T+I GLCK+G++  A+EL+ +M+ K   P+V+TY  +I  FC      E
Sbjct: 8   VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67

Query: 114 AKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
           A+ +  EM  +G+  N V ++ ++  LCK+ K+++A  +   M   G +P+ F +N+L+ 
Sbjct: 68  ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   +   A  L+  M   G   N  +Y+ LI+ + +   ++ AL L ++ML +G   
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
             +TYN L   L     +E+   LF++M   G+  +  +    I+GLC+ G I  ALE  
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
           R +       DI +Y+ LI+GLCK+GR + A  LF  L    +  D +TYN +I   C +
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           G  D AH L       G  P+ V +  L+   I+  +
Sbjct: 308 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  L  +++  GCEPNVITY+ LI+  C+ G    A N+ +EM +G G        +A
Sbjct: 31  VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM-SGKG-----LALNA 84

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I  LCK+  V  A  +   M  K   PD+ T+NS+I G C  N   EA  L+ +
Sbjct: 85  VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 144

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +T++ ++    + G M+EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 145 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 204

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ P +VTYN+
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 264

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 265 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 313



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 151/281 (53%)

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P++ T++ ++  LCK G +  A +L+  M   G  PN   Y  L+D FC  GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A+ +   M   G   N   Y+ LI+  CK+++++ AL+++ +M SKG KP + T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL ++++ E A  L+ +M   GV A+T  Y T I    + G + EAL+L   +    
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
           C LD  +Y+ LI  LC++G ++    LF  +    L  + ++ NI+I+ LC  G +  A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   DM  +G+ PD V +N+L+ G  +     + + L  ++
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 109/212 (51%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           SM S+GC  ++F+Y+ LI G CK   +  A  L +EM  KG +P V+TY  L     +  
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           ++E A  + DEM   G+A +   Y   I  LCK+  + +AL +F  +    C+ DI +++
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LI GLCK  + + A  L+  +    +IA+ +TYN +IHA    G M +A  L  DM  +
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           G   D + +N L+    R     K + L   M
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDM 215



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           + + M   G   D + Y T I GLCK GY+V A EL   ++I  CE ++ +Y+ LID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K GRL+ A  +   +    L  + V YN +I ALC D K+  A ++F DM +KG  PD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 377 AFNTLMLGCIRNNETSKVVELLHRM 401
            FN+L+ G  + N+  + + L   M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDM 145



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 91/180 (50%)

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           ++  MLS G  P + TYNTL +GL +   +  A +L +EMQ  G   +   Y   ID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           K G + EA  +   +      L+   Y+CLI  LCK  +++ A  +F  +       D+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           T+N +I  LC   K ++A  L+ DM  +GV  + + +NTL+   +R     + ++L++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K++  G  P+V+TY+T++N  C+ G    AL L ++M    G  G+  + DA 
Sbjct: 186 KAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQM----GSKGI--EADAC 239

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++D LCK     K   LL +M+ + I+P+ +TYNS+I GF        A R+F EM
Sbjct: 240 TYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEM 299

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN VT++ ++D  C +G  E+A  +LE+M   G +PN   Y+ L++G C   + 
Sbjct: 300 SMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKF 359

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             +K +   M   G      +Y+ +I+G C+N  +  ++ L  +ML  G+ P VVT++ L
Sbjct: 360 ELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVL 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++   ++  +M + G+A ++  Y T I   CK G +VEA +++  +  +  
Sbjct: 420 INGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + +    + L+  LCK G++ +A   FH + +   + + +T++ +I+     G   KA  
Sbjct: 480 DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +F +M   G  P    +  L+    R  +  +   LL ++
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 204/402 (50%), Gaps = 7/402 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++      PN +TY+ LI+G C  G+   AL + E M+   G      KP+ V 
Sbjct: 292 ATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE-MMEATGP-----KPNEVS 345

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ +++GLC+    + +K +L +M+   +    + Y ++I G C     NE+ +L  +M+
Sbjct: 346 YSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKML 405

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P+VVTFSV+++  C+ GK++   +++  M + G+ PN+ +Y TL+  +C TG V 
Sbjct: 406 KDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVV 465

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A +++V+M  +G   N F  ++L++  CK+ ++  A   +  M   G  P  +T++ + 
Sbjct: 466 EAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCII 525

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G        +AF +FDEM + G     + Y   +  LC+ G   EA  L   L  +   
Sbjct: 526 NGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSA 585

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D  +Y+ ++    KSG L  A  LF  + +  ++ D  TY I+   L   GKM  A   
Sbjct: 586 VDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHF 645

Query: 363 FLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + ++  KG V+P+ V + T + G  R  ++   +     M++
Sbjct: 646 YGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEK 687



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 171/347 (49%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +CK +  ++  +I    +EG V  A E    M  +  NP V T N ++            
Sbjct: 93  LCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAV 152

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
              F EM+ + V P+V TF+++++ LC  GK+++A  LL+ M + G  P+   YNT+++ 
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  GR   A EL   M S G + +  +Y++L++  CKN        L  +M  + I P 
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            +TYN++  G  +  ++  A ++F EM    +  +   Y   IDG C +G   +AL +  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +     + +  SYS L++GLC+  + +++  +   +    +I   + Y  MI  LC +G
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNG 392

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            ++++  L   M   GV PD V F+ L+ G  R  +   V E++ +M
Sbjct: 393 LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKM 439



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 172/368 (46%), Gaps = 6/368 (1%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C+ N   +  LI    R G    AL  F  M    G  G    P       ++  L KE 
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLM----GIRGF--NPSVYTCNMLLGKLVKER 147

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V        +M  + + PDV T+N +I   C      +A  L  +M + G  P+VVT++
Sbjct: 148 KVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYN 207

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            +++  CK G+ + A +L++ M   G+  +A  YN L+D  C   R  +   L   M   
Sbjct: 208 TVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKR 267

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               N  +Y+ +ING+ K  +I  A  ++ EM    + P  VTYN L  G       E+A
Sbjct: 268 MISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQA 327

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
             + + M+  G   +  +Y   ++GLC++     +  +   +R+    +   +Y+ +IDG
Sbjct: 328 LTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDG 387

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LC++G L  + +L   + +  ++ DVVT++++I+  C  GK+    ++   M   G+AP+
Sbjct: 388 LCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPN 447

Query: 375 CVAFNTLM 382
            + + TL+
Sbjct: 448 SIIYTTLI 455



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 192/405 (47%), Gaps = 8/405 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A ALF ++      P+  TY+ +  GL R G  + AL+ +  ++ G G       P+ V
Sbjct: 606  DAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLL-GKG----AVSPEKV 660

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +YTT +DGL + G    A      M+   +  D++  N ++ G+       +A  +F  M
Sbjct: 661  MYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIF-TM 719

Query: 122  MDQGV--QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M  G+   P++ T+++++    K   + + S L  +M++ G+ P+    ++L+ GFC + 
Sbjct: 720  MWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSA 779

Query: 180  RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
             ++   +L   M   G   +  ++++LI  YC+  E+  A  L + M    I P + T++
Sbjct: 780  MLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHD 839

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            ++   L  +  V+ +  L  EM   G   D   Y   ++ +C+ G+I  A +L   +  L
Sbjct: 840  SIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEAL 899

Query: 300  KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                   + S L+ GL K G+++ A  +   + R  LI  + T+  ++H  C +  + +A
Sbjct: 900  GISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEA 959

Query: 360  HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              L   M+   V  D +A+N L+ G   + + +  ++L   + +R
Sbjct: 960  LKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQR 1004



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 173/387 (44%), Gaps = 31/387 (8%)

Query: 16   EPNVITYSTLINGLCRTGHTIVALNLFEEM---------------INGNGEFGVVCK--- 57
             P  + Y+T ++GL R G +  AL   E+M               +NG    G + K   
Sbjct: 656  SPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGD 715

Query: 58   ------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF 105
                        P    Y  ++ G  K+  + K   L   M    I PD +T +S+I GF
Sbjct: 716  IFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGF 775

Query: 106  CYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNA 165
            C +   +   +L  +M+  GV  +  TF++++ + C+  ++ +A  L+ +M    + P+ 
Sbjct: 776  CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDM 835

Query: 166  FVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
              +++++        V  +  L   M   GC  +   Y  L+N  C+   I GA  L  E
Sbjct: 836  TTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDE 895

Query: 226  MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            M + GI    V  + L  GL +  +VE A  + D M R  +      + T +   C+N  
Sbjct: 896  MEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNES 955

Query: 286  IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            +VEAL+L  T+     +LD+ +Y+ LI GLC  G +  A +L+  + +  L  ++ TY I
Sbjct: 956  LVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCI 1015

Query: 346  MIHALCA-DGKMDKAHDLFLDMEAKGV 371
            +I A+   D  + K   L  D++ +GV
Sbjct: 1016 LIDAIFTNDISLAKGEVLLKDLQERGV 1042



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 188/405 (46%), Gaps = 11/405 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A ++F ++   G  P+  TY  L+  LCR G    A  L +++        +    D 
Sbjct: 535 LKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL------HYIPSAVDT 588

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y TI+    K G +  A  L  +M  +N+ PD  TY  +  G         A   +  
Sbjct: 589 VTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGN 648

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ +G V P  V ++  +D L + G+ + A    E M + G+  +    N +++G+   G
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708

Query: 180 RVNRAKELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           ++ +A ++F  M S +    ++ +Y+IL++GY K K +    +LY+ M+  GI P  +T 
Sbjct: 709 KMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTC 768

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           ++L +G  +   ++   KL  +M   GVA D   +   I   C+   + +A +L   + +
Sbjct: 769 HSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNL 828

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+ ++  +I  L +   ++ +  L H +     I D   Y  +++ +C  G +  
Sbjct: 829 FDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHG 888

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLG---CIRNNETSKVVELLHR 400
           A  L  +MEA G++   VA + L+ G   C +  E   V++ + R
Sbjct: 889 AFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 16/272 (5%)

Query: 147 EEASQLLELMIQIGV----------------RPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           E A  +L+ + Q+GV                + N  V++ L+  +   G V  A E F  
Sbjct: 64  ENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRL 123

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G   +V++ ++L+    K +++      + EML++ + P V T+N L   L    +
Sbjct: 124 MGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGK 183

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           +++A  L  +M+  G       Y T ++  CK G    ALEL   +     E D  +Y+ 
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           L+D LCK+ R    + L   + + ++  + +TYN +I+    +GK+  A  +F +M    
Sbjct: 244 LVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLN 303

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           + P+CV +N L+ G   +    + + +L  M+
Sbjct: 304 LLPNCVTYNALIDGHCHDGNFEQALTILEMME 335


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 211/419 (50%), Gaps = 43/419 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +L   + +   +P+V +Y TLING+ + G  + AL +F+EM       GVV   D  
Sbjct: 169 KAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEM----SVRGVV--ADVT 222

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y  +IDG  K G  DK KE+  ++ KD ++ P+VVTYN +I G C     +E+  ++  
Sbjct: 223 CYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWER 282

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     + ++ T+S ++  LC+ G ++ A ++ + +++  +  +A  +N +++GFC  G+
Sbjct: 283 MTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGK 342

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  + EL++ M    C+  V SY+ILI G  +N ++E A+S++  +  KG +P   TY  
Sbjct: 343 IKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGV 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL-------- 292
           L  GL +  ++ +A K+F E +      D +AY + +DGLCK G + EA+ +        
Sbjct: 402 LIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461

Query: 293 ---------------------------FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
                                      FR +    C   I SY+ LI GLCK+ R   A+
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                +       D++T ++++  LC + K++ A +L+     KG  PD   +N LM G
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHG 580



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 207/418 (49%), Gaps = 42/418 (10%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+TY+ +INGLC+ G    +L ++E M     E       D   Y+++I GLC+ G +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE------KDMFTYSSLIHGLCEAGNI 308

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A  +  ++ + ++  D VT+N+++ GFC A    E+  L++ M  +  Q  VV+++++
Sbjct: 309 DGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNIL 367

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L +NGK+EEA  + EL+ + G RP +  Y  L+ G C  GR+N+A ++F   E    
Sbjct: 368 IKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPG 427

Query: 197 KHNVFSYSILINGYCKN-----------------------------------KEIEGALS 221
           K + ++YS +++G CK                                     ++E A++
Sbjct: 428 KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAIN 487

Query: 222 LYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            + EM  KG  PT+V+YNTL  GL +  +   A+    EM       D       +DGLC
Sbjct: 488 FFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLC 547

Query: 282 KNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVV 341
           +   I  AL L++       + DI  Y+ L+ GLC   +L+ A +L+  + R   + ++V
Sbjct: 548 QEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLV 607

Query: 342 TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           T N ++  L      +KA +++  +   G+ PD +++N  + G    +  S  +E L+
Sbjct: 608 TRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLN 665



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 209/389 (53%), Gaps = 8/389 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN+ TY+ LI   C+      A++L + M + N       KPD   Y T+I+G+ K G +
Sbjct: 149 PNLQTYNILIKISCKKQQIEKAISLLDWMWSQN------LKPDVFSYGTLINGMVKVGDL 202

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSV 135
             A ++  +M  + +  DV  YN +I GF    D ++ K ++  ++ D  V PNVVT+++
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +++ LCK G+ +E+ ++ E M +     + F Y++L+ G C  G ++ A  ++  +    
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              +  +++ ++NG+C+  +I+ +  L+  M  +  + TVV+YN L  GLFE  +VE A 
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAI 381

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            +++ + + G   ++  Y   I GLCKNG + +AL++F+       +LD  +YS ++DGL
Sbjct: 382 SIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGL 441

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           CK GR+  A  + + + +     D    N +I+      K++ A + F +ME KG +P  
Sbjct: 442 CKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTI 501

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRMDER 404
           V++NTL+ G  +    S+    +  M E+
Sbjct: 502 VSYNTLIKGLCKAERFSEAYSFVKEMLEK 530



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 188/352 (53%), Gaps = 9/352 (2%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEA 114
           CK D  +  T+I    K    +KA +    M+D     P V +YN+++  F   N+ + A
Sbjct: 78  CKEDVAL--TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135

Query: 115 KRL--FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           +    + E MD  V PN+ T+++++   CK  ++E+A  LL+ M    ++P+ F Y TL+
Sbjct: 136 ESFSRYFESMD--VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLI 193

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GI 231
           +G    G +  A ++F  M   G   +V  Y++LI+G+ K+ + +    ++  ++    +
Sbjct: 194 NGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSV 253

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P VVTYN +  GL +  + + + ++++ M ++    D + Y + I GLC+ G I  A+ 
Sbjct: 254 YPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVR 313

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           +++ +      +D  +++ +++G C++G++K ++EL+  + +      VV+YNI+I  L 
Sbjct: 314 VYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLF 372

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +GK+++A  ++  +  KG  P+   +  L+ G  +N   +K +++    ++
Sbjct: 373 ENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAED 424



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 130/248 (52%), Gaps = 3/248 (1%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G +P    YNTL++ F      +RA+      ESM    N+ +Y+ILI   CK ++IE A
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           +SL   M S+ +KP V +Y TL  G+ ++  +  A K+FDEM   GV AD   Y   IDG
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 280 LCKNGYIVEALELFRTLRILKCEL--DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
             K+G   +  E++  L +  C +  ++ +Y+ +I+GLCK GR   + E++  + +    
Sbjct: 231 FFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE 289

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+ TY+ +IH LC  G +D A  ++ ++    +  D V  N ++ G  R  +  +  EL
Sbjct: 290 KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFEL 349

Query: 398 LHRMDERN 405
              M + N
Sbjct: 350 WMVMGKEN 357



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 6/124 (4%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P++  Y+ L++GLC       AL L+  M          C P+ V   T+++GL K 
Sbjct: 566 GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS------TCVPNLVTRNTLMEGLYKV 619

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
              +KA E+   +    ++PD+++YN  I+G C  +  ++A     + +++G+ P  VT+
Sbjct: 620 RDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTW 679

Query: 134 SVIM 137
           ++++
Sbjct: 680 NILV 683


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 185/396 (46%), Gaps = 6/396 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++ A G  P+VITYST+I+   + G    A  L  EM       GVV   + + Y+ 
Sbjct: 278 LLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT----KGVVA--NIITYSI 331

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +I    K G  ++A  LL +M++  + PDV+TY+S I          EA  L  EM  +G
Sbjct: 332 VIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG 391

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V PN +++ +++    K G+  EA  LL+ M   GV P+   Y+  +D      R  +A 
Sbjct: 392 VTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQAL 451

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M + G   NV SY+  I+   K    + A+ L  EM + G+ P V+TY+ +    
Sbjct: 452 WLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASC 511

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
               Q E A  LF EMQR G+  D  +  T I+   + G+  EAL++   +  +    D 
Sbjct: 512 AMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDA 571

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            SY   ID   K  R K   +L   +    L  D ++Y   + A   DG   +A  L  D
Sbjct: 572 ISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRD 631

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M A G++PD V +N+ +  C +     +   LL +M
Sbjct: 632 MLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQM 667



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 187/400 (46%), Gaps = 6/400 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L   + A G  P+V+TYS+ I    +      A+ L   M  G G      KP+ +
Sbjct: 204 RAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSM-KGQG-----VKPNVI 257

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y+  I    K G  + A +LL +M    + PDV+TY++VI           A RL +EM
Sbjct: 258 VYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEM 317

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  N++T+S+++    K G+ EEA  LL  M + GV P+   Y++ +      G+ 
Sbjct: 318 PTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQW 377

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   M   G   N  SY I+I+   K      A+ L  EM + G+ P V+ Y+  
Sbjct: 378 EEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAA 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  + E+A  L  EM   G+  +  +Y + ID   K G    A+EL R +     
Sbjct: 438 IDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGL 497

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +YS +I       + + A +LF  + R  +  DVV+ N  I+A    G  ++A D
Sbjct: 498 APDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD 557

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +  +M   G+ PD +++ T +  C + +   ++++LL  M
Sbjct: 558 VLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREM 597



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 183/401 (45%), Gaps = 16/401 (3%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   G   N+ITYS +I    + G    A+ L  EM     E GV   PD + Y++
Sbjct: 313 LLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQ----ENGVA--PDVITYSS 366

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            I    K+G  ++A  LL +M  + + P+ ++Y  VI          EA  L  EM   G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           V P+V+ +S  +D   +  + E+A  LL  M   G+ PN   YN+ +D    TGR   A 
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M + G   +V +YS +I      ++ E AL L+ EM  +GI P VV+ NT     
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINAC 546

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +    E A  +  EM   G+  D  +YRT ID   K     E ++L R +  +    D 
Sbjct: 547 AQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDA 606

Query: 306 RSY-----SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            SY     +C +DGL K   +     L   +    L  DVVTYN  I+A    G+  +A 
Sbjct: 607 ISYRFAMSACSVDGLWKEALV-----LLRDMLAVGLSPDVVTYNSAINACAKGGRWKEAT 661

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M   G+APD  +FN  +  C   ++    VE+L  M
Sbjct: 662 VLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEM 702



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 6/368 (1%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           AL++ + M     E GV  KPD+  Y++ I         ++A ELL  M  +   PDV+T
Sbjct: 170 ALDVLDRMQ----EQGV--KPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLT 223

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           Y+S I      +   EA  L   M  QGV+PNV+ +S  +    K G+ E A  LL+ M 
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMP 283

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+ P+   Y+T++D     G+   A  L + M + G   N+ +YSI+I    K  + E
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWE 343

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  EM   G+ P V+TY++      +  Q E A  L  EM   GV  +  +Y   I
Sbjct: 344 EAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVI 403

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
               K G   EA++L + ++      D+ +YS  ID   ++ R + A  L   +P   L 
Sbjct: 404 SACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLT 463

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            +V++YN  I A    G+   A +L  +M A G+APD + ++ ++  C    +  + ++L
Sbjct: 464 PNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDL 523

Query: 398 LHRMDERN 405
              M  + 
Sbjct: 524 FREMQRQG 531



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 184/390 (47%), Gaps = 8/390 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA AL  +++  G  P+VITYS+ I+   + G    A+ L  EM       GV   P+A+
Sbjct: 344 EAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM----EGVT--PNAI 397

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I    K G   +A +LL +M+   + PDV+ Y++ I     A+   +A  L  EM
Sbjct: 398 SYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREM 457

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNV++++  +D   K G+ + A +LL  M   G+ P+   Y+ ++    +  + 
Sbjct: 458 PATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQW 517

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +LF  M+  G   +V S +  IN   +    E AL +  EM + G+ P  ++Y T 
Sbjct: 518 EEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTA 577

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +  + +    L  EM   G+  D  +YR  +     +G   EAL L R +  +  
Sbjct: 578 IDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGL 637

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG-KMDKAH 360
             D+ +Y+  I+   K GR K A  L   +P   L  DV ++N  I A C +G +   A 
Sbjct: 638 SPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA-CGNGDQWGTAV 696

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           ++  +M A GV+P+   + T M  C R  E
Sbjct: 697 EVLFEMRALGVSPNEATYLTAMYACKRCGE 726



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 155/328 (47%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   KA ++L +M+++ + PD   Y+S I     A     A  L   M  +G  P+V+T+
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S  +    K  + +EA  LL  M   GV+PN  VY+  +      G+   A +L   M +
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G   +V +YS +I+   K  + E A  L  EM +KG+   ++TY+ +     +  Q E 
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L  EMQ +GVA D   Y + I    K G   EA+ L R + +     +  SY  +I 
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
              K GR + A +L   +    +  DV+ Y+  I A     + ++A  L  +M A G+ P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRM 401
           + +++N+ +  C +   +   VELL  M
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREM 492


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 6/381 (1%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
            +LF +++  G  PNV  Y+++I+ LC+      A+ + ++M      F   C PD + +
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM------FASGCDPDIITF 347

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
            T+I GLC EG V KA+  L +   + +NP+ ++Y  +I GFC   +   A  L +EMM 
Sbjct: 348 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMG 407

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G  P+VVTF  ++  L   GK+ EA  + E M +  V P+  +YN L+ G C    +  
Sbjct: 408 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPA 467

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           AK +   M     + + F Y+ LI+G+ +++ +  A  ++  M  KG++P +V+ N +  
Sbjct: 468 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIK 527

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G  +   +  A      M++ G   D + Y T I G  K G +  AL     +   KC+ 
Sbjct: 528 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 587

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           ++ +YS LI+G CK+G    A  LF ++    L  +VVTY I+I +L    K+ +A   F
Sbjct: 588 NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYF 647

Query: 364 LDMEAKGVAPDCVAFNTLMLG 384
             M     +P+ V  + L+ G
Sbjct: 648 ETMLLNHCSPNDVTLHYLVNG 668



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 191/408 (46%), Gaps = 42/408 (10%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC P+V+ Y+ LI+G CR G     L L  EM    G       P  V Y ++I+ L K+
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM-EAKGFL-----PTLVTYGSLINCLGKK 287

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G ++K   L L+M+ + ++P+V  YNSVI   C    + +A  +  +M   G  P+++TF
Sbjct: 288 GDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITF 347

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++  LC  G + +A   L   I+  + PN   Y  L+ GFC+ G +  A +L + M  
Sbjct: 348 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMG 407

Query: 194 MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
            G   +V +                                   Y++LI+G CK   +  
Sbjct: 408 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPA 467

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A ++  EML K ++P    Y TL  G      +  A K+F+ M+  GV  D  +    I 
Sbjct: 468 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIK 527

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
           G C+ G + EA+     +R + C  D  +Y+ +I G  K G L  A      + +     
Sbjct: 528 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 587

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           +VVTY+ +I+  C  G  D A  LF +M+A+ ++P+ V + T+++G +
Sbjct: 588 NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY-TILIGSL 634



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 175/385 (45%), Gaps = 8/385 (2%)

Query: 22  YST--LINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           YST  L+ GLC  G     L L E        +G  C P  V Y  +IDG C+ G + + 
Sbjct: 205 YSTCVLVRGLCLEGRVEEGLKLIE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 258

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             LL +M+ K   P +VTY S+I       D  +   LF+EM  +G+ PNV  ++ ++D 
Sbjct: 259 LLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDA 318

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK     +A  +L+ M   G  P+   +NTL+ G C  G V +A+             N
Sbjct: 319 LCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPN 378

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
             SY+ LI+G+C   E+  A  L  EM+ +G  P VVT+  L  GL    +V  A  + +
Sbjct: 379 QLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 438

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M    V  D   Y   I GLCK   +  A  +   +     + D   Y+ LIDG  +S 
Sbjct: 439 KMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 498

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            L  A ++F  +    +  D+V+ N MI   C  G M +A     +M   G  PD   + 
Sbjct: 499 NLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 558

Query: 380 TLMLGCIRNNETSKVVELLHRMDER 404
           T++ G  +    +  +  L  M +R
Sbjct: 559 TVISGYAKQGNLNGALRWLCDMIKR 583



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 199/433 (45%), Gaps = 56/433 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++ A GC+P++IT++TLI GLC  GH   A +   E I           P+ +
Sbjct: 327 QAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE------LNPNQL 380

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G C  G +  A +LL++M  +   PDVVT+ ++I G   A   +EA  +  +M
Sbjct: 381 SYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 440

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V P+V  ++V++  LCK   +  A  +LE M++  V+P+ FVY TL+DGF  +  +
Sbjct: 441 TERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 500

Query: 182 NRAKELFVSME-----------------------------------SMGCKHNVFSYSIL 206
             A+++F  ME                                    +GC  + F+Y+ +
Sbjct: 501 GDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 560

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY K   + GAL    +M+ +  KP VVTY++L  G  +    + A  LF  MQ   +
Sbjct: 561 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 620

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL----------- 315
           + +   Y   I  L K   ++ A   F T+ +  C  +  +   L++GL           
Sbjct: 621 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 680

Query: 316 -CKSGRLKIAWELFHSLPRGVL-IADV--VTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
            C +  +     L     + V  I D     YN +I +LC    + +A D    M  KG 
Sbjct: 681 CCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGY 740

Query: 372 APDCVAFNTLMLG 384
            P+ + F +L+ G
Sbjct: 741 VPNPITFLSLLYG 753



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 186/370 (50%), Gaps = 21/370 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A+ L  ++   G  P+V+T+  LI+GL   G    AL + E+M     E  V   PD 
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT----ERQVF--PDV 449

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IY  +I GLCK+  +  AK +L +M +KN+ PD   Y ++I GF  + +  +A+++F  
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 509

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV+P++V+ + ++   C+ G M EA   +  M ++G  P+ F Y T++ G+   G 
Sbjct: 510 MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 569

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +N A      M    CK NV +YS LINGYCK  + + A  L++ M ++ + P VVTY  
Sbjct: 570 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 629

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL-----------CKNGYIVEA 289
           L   LF+  +V RA   F+ M  +  + +       ++GL           C N   V  
Sbjct: 630 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 290 ----LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
               L +F+ L     +    +Y+ +I  LC+   L+ A +  + + +   + + +T+  
Sbjct: 690 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 749

Query: 346 MIHALCADGK 355
           +++  C+ GK
Sbjct: 750 LLYGFCSVGK 759



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 161/349 (46%), Gaps = 1/349 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN-PDVVTYNSVIRGFCYANDSNEAKR 116
           P       ++      G + KA ++  +++++  + P+V   N +++        ++A++
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+ EM+ +    +  +  V++  LC  G++EE  +L+E     G  P+   YN L+DG+C
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 250

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G + R   L   ME+ G    + +Y  LIN   K  ++E   SL+ EM  +G+ P V 
Sbjct: 251 RRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            YN++   L +     +A  +  +M   G   D   + T I GLC  G++ +A    R  
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
              +   +  SY+ LI G C  G L  A +L   +       DVVT+  +IH L   GK+
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            +A  +   M  + V PD   +N L+ G  + +       +L  M E+N
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 9/163 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCR-TGHTIVALNLFEEMINGNGEFGVVCK-- 57
           + A   F  +    C PN +T   L+NGL   T   I ++      ++G     VV K  
Sbjct: 641 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKL 700

Query: 58  ------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P    Y  II  LC+   + +A +   +M  K   P+ +T+ S++ GFC    S
Sbjct: 701 VFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 760

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
              + +      Q     +  +  + D+        E S++L+
Sbjct: 761 MNWRTILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQ 803


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 215/441 (48%), Gaps = 43/441 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  L   + +   +P+V +Y T+ING+ ++G  + AL +F+EM     E G+V  PD 
Sbjct: 166 VEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF----ERGLV--PDV 219

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           + Y  +IDG  K G   + KE+  ++ K   + P+VVTYN +I G C     +E+  ++ 
Sbjct: 220 MCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWE 279

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M     + ++ T+S ++  LC  G ++ A ++ + M++  V  +   YN L++GFC  G
Sbjct: 280 RMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAG 339

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++  + EL+V M    C HNV SY+I I G  +N+++E A+S++  +  +G      TY 
Sbjct: 340 KIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL------- 292
            L  GL +   + +A K+  E +  G   D +AY + +DGL K G + EAL +       
Sbjct: 399 VLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458

Query: 293 ----------------------------FRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
                                       FR +    C   + SY+ LI+GLCK+ R   A
Sbjct: 459 GCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDA 518

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +     +       D++TY++++  LC   K+D A +L+  +  KG+ PD    N LM G
Sbjct: 519 YSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHG 578

Query: 385 CIRNNETSKVVELLHRMDERN 405
                +    + L   M + N
Sbjct: 579 LCSAGKIEDALLLYSNMKQSN 599



 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 200/374 (53%), Gaps = 7/374 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PNV+TY+ +INGLC+ G    +L ++E M          C+ D   Y+++I GLC  G V
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNE------CEMDLFTYSSLICGLCDVGNV 306

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           D A E+  +M  +++  DVVTYN+++ GFC A    E+  L++ M  +    NVV++++ 
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIF 365

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  L +N K+EEA  + EL+ + G   ++  Y  L+ G C  G +N+A ++    +  G 
Sbjct: 366 IRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
           K + F+YS +++G  K   ++ AL +  +M   G + +    N L  G     ++E A  
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAIC 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            F EM+  G +    +Y T I+GLCK     +A    + +     + D+ +YS L+DGLC
Sbjct: 486 FFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLC 545

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           +  ++ +A  L+  +    L  DV  +NI++H LC+ GK++ A  L+ +M+     P+ V
Sbjct: 546 QGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLV 605

Query: 377 AFNTLMLGCIRNNE 390
             NTLM G  +  E
Sbjct: 606 THNTLMDGLYKARE 619



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 222/442 (50%), Gaps = 46/442 (10%)

Query: 2   EAAALFTKLKA-FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV-CKPD 59
           EA   F K++  FGC+P + +Y+ L+N         +  NL E+  +    F  V   P+
Sbjct: 96  EALDCFQKMEEIFGCKPGIRSYNALLNAF-------IEANLLEKAESFLAYFETVGILPN 148

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              Y  +I    K+    +AK LL  M  K++ PDV +Y +VI G   + D   A  +F 
Sbjct: 149 LQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFD 208

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG-VRPNAFVYNTLMDGFCLT 178
           EM ++G+ P+V+ +++++D   K G   +  ++ E +++   V PN   YN +++G C  
Sbjct: 209 EMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKM 268

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-------- 230
           GR + + E++  M+   C+ ++F+YS LI G C    ++GA+ +Y EM+ +         
Sbjct: 269 GRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTY 328

Query: 231 ------------IKPT--------------VVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                       IK +              VV+YN    GLFE  +VE A  +++ ++R 
Sbjct: 329 NALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRR 388

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G  AD+  Y   I GLCKNG++ +AL++ +  +    +LD  +YS ++DGL K GR+  A
Sbjct: 389 GSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448

Query: 325 WELFHSLPR-GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
             + H + + G  ++  V  N +I+      K+++A   F +ME KG +P  V++NTL+ 
Sbjct: 449 LGIVHQMDKYGCELSPHVC-NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507

Query: 384 GCIRNNETSKVVELLHRMDERN 405
           G  +    S     +  M E++
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKD 529



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 210/421 (49%), Gaps = 42/421 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E+  ++ ++K   CE ++ TYS+LI GLC  G+   A+ +++EM+  +         D V
Sbjct: 273 ESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV------DVV 326

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +++G C+ G + ++ EL + M  +N + +VV+YN  IRG        EA  ++  +
Sbjct: 327 TYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELL 385

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G   +  T+ V++  LCKNG + +A ++L+     G + +AF Y++++DG    GRV
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 182 N-----------------------------RAKEL------FVSMESMGCKHNVFSYSIL 206
           +                             RA +L      F  ME+ GC   V SY+ L
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING CK +    A S   EML K  KP ++TY+ L  GL +  +++ A  L+ ++   G+
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D   +   + GLC  G I +AL L+  ++   C  ++ +++ L+DGL K+   ++A  
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
           ++  + +     D+++YNI +  LC+ G++     LF D    G+ P  + +  L+   +
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVL 685

Query: 387 R 387
           +
Sbjct: 686 K 686



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 41/318 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +++  L+  G   +  TY  LI+GLC+ GH   AL + +E  +G        K DA 
Sbjct: 377 EAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD------KLDAF 430

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM----------------------------------- 86
            Y++I+DGL K+G VD+A  ++ QM                                   
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM 490

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           + K  +P VV+YN++I G C A   ++A     EM+++  +P+++T+S++MD LC+  K+
Sbjct: 491 ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKI 550

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           + A  L   ++  G+ P+  ++N LM G C  G++  A  L+ +M+   C  N+ +++ L
Sbjct: 551 DMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTL 610

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G  K +E E A  +++ M   G +P +++YN    GL    ++     LFD+  ++G+
Sbjct: 611 MDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGI 670

Query: 267 AADTWAYRTFIDGLCKNG 284
              +  +   +  + K G
Sbjct: 671 LPTSITWYILVRAVLKLG 688



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 191/385 (49%), Gaps = 40/385 (10%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEA 114
           C  D V+  T++    K    ++A +   +M++     P + +YN+++  F  AN   +A
Sbjct: 76  CTEDVVL--TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKA 133

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
           +         G+ PN+ T+++++    K  +  EA  LL+ M    ++P+ + Y T+++G
Sbjct: 134 ESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVING 193

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IK 232
              +G +  A E+F  M   G   +V  Y+I+I+G+ K  +      ++ E L KG  + 
Sbjct: 194 MVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIW-ERLVKGSCVY 252

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P VVTYN +  GL ++ + + + ++++ M+++    D + Y + I GLC  G +  A+E+
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEV 312

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL--------------FHSLPRGVLI- 337
           ++ +      +D+ +Y+ L++G C++G++K ++EL              ++   RG+   
Sbjct: 313 YKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFEN 372

Query: 338 -------------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
                              AD  TY ++IH LC +G ++KA  +  + +  G   D  A+
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 379 NTLMLGCIRNNETSKVVELLHRMDE 403
           ++++ G  +     + + ++H+MD+
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDK 457



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 2/273 (0%)

Query: 135 VIMDELCKNGKMEEASQLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            ++    K+    EA    + M +I G +P    YN L++ F     + +A+      E+
Sbjct: 83  TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +G   N+ +Y+ILI    K ++   A  L   M SK +KP V +Y T+  G+ +   +  
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSCLI 312
           A ++FDEM   G+  D   Y   IDG  K G  V+  E++  L    C   ++ +Y+ +I
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCK GR   + E++  + +     D+ TY+ +I  LC  G +D A +++ +M  + V 
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            D V +N L+ G  R  +  +  EL   M + N
Sbjct: 323 VDVVTYNALLNGFCRAGKIKESFELWVMMGKEN 355



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L+ ++   G EP+V  ++ L++GLC  G    AL L+  M   N      C P+ V 
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSN------CLPNLVT 606

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + T++DGL K    + A  +   M      PD+++YN  ++G C     ++   LF + +
Sbjct: 607 HNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL 666

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             G+ P  +T+ +++  + K G ++  S
Sbjct: 667 KNGILPTSITWYILVRAVLKLGPLDSLS 694


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 200/375 (53%), Gaps = 8/375 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C P+ +TYS LI+   + GH   A+ LF+EM   NG +     P A IYTT++    K  
Sbjct: 230 CFPDTVTYSALISAFGKLGHYDSAIRLFDEM-KENGLY-----PTAKIYTTLLGIYFKLD 283

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            V+KA +++ +MKDK     V TY   I+G   A   ++A R+F++M+  G +P+VV  +
Sbjct: 284 KVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLIN 343

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-FCLTGRVNRAKELFVSMES 193
            +++ L K G++E   +L   M     +PN   YNT++   F      + A   F  M+ 
Sbjct: 344 SLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKG 403

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   + F+YSILI+G+CK   IE AL L  EM  KG  P    Y +L   L ++ + E 
Sbjct: 404 CGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEA 463

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +LF E++ +   +    Y   I    K G + EA++LF  +  L  + D+ +Y+ L+ 
Sbjct: 464 ANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMS 523

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G+ ++G +  A  L  ++       D+ ++NI+++ L   G  D+A ++F  M++  + P
Sbjct: 524 GMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKP 583

Query: 374 DCVAFNTLMLGCIRN 388
           D V++NT+ LGC+ +
Sbjct: 584 DAVSYNTV-LGCLSH 597



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 171/353 (48%), Gaps = 2/353 (0%)

Query: 53  GVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDS 111
           G  CKP A  Y ++I  L +EG ++K  E+  +M  D N  PD VTY+++I  F      
Sbjct: 191 GRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHY 250

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           + A RLF EM + G+ P    ++ ++    K  K+E+A  +++ M   G     F Y   
Sbjct: 251 DSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEW 310

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G    GRV+ A  +F+ M   GCK +V   + LIN   K   +E  L L+ +M S   
Sbjct: 311 IKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQC 370

Query: 232 KPTVVTYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           KP VVTYNT+   LFE       A   F++M+  G+A  ++ Y   IDG CK   I +AL
Sbjct: 371 KPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKAL 430

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            L   +          +Y  LI+ L K  R + A ELF  L      +    Y +MI   
Sbjct: 431 LLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHF 490

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              G++ +A DLF +ME  G  PD  A+N LM G +R     +   LL  MDE
Sbjct: 491 GKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDE 543



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 196/403 (48%), Gaps = 10/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN-GNGEFGVVCKPDA 60
           +A ++F ++K   C+P   TY+++I  L + GH      ++ EM N GN      C PD 
Sbjct: 181 KALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGN------CFPDT 234

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y+ +I    K G  D A  L  +MK+  + P    Y +++  +   +   +A  +  E
Sbjct: 235 VTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKE 294

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G    V T++  +  L K G++++A ++   MI+ G +P+  + N+L++     GR
Sbjct: 295 MKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGR 354

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGY--CKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           +    +LF  MES  CK NV +Y+ +I     CK    E A S + +M   GI P+  TY
Sbjct: 355 LEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAA-SWFEKMKGCGIAPSSFTY 413

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           + L  G  + +++E+A  L +EM   G      AY + I+ L K      A ELF  L+ 
Sbjct: 414 SILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKE 473

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                  R Y+ +I    K GRL  A +LF+ + +     DV  YN ++  +   G +D+
Sbjct: 474 NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDE 533

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  L   M+  G +PD  + N ++ G  R     + +E+  +M
Sbjct: 534 AQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKM 576



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 180/360 (50%), Gaps = 14/360 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +  ++K  GC   V TY+  I GL + G    A  +F +MI         CKPD V
Sbjct: 287 KALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDG------CKPDVV 340

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF--CYANDSNEAKRLFI 119
           +  ++I+ L K G ++   +L  +M+     P+VVTYN+VI+    C A  ++EA   F 
Sbjct: 341 LINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKA-PASEAASWFE 399

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M   G+ P+  T+S+++D  CK  ++E+A  LLE M + G  P    Y +L++      
Sbjct: 400 KMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVK 459

Query: 180 RVNRAKELFVSMESMGCKHNVFS-YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           R   A ELF+ ++   C H+    Y+++I  + K   +  A+ L++EM   G KP V  Y
Sbjct: 460 RYEAANELFLELKE-NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAY 518

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  G+     ++ A  L   M  +G + D  ++   ++GL + G    A+E+F  ++ 
Sbjct: 519 NALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKS 578

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D  SY+ ++  L  +G  + A +L   +       + +TY  ++ A+   GK+D+
Sbjct: 579 SIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAV---GKVDE 635



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 9/324 (2%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN-GK 145
           K +N   D  ++ ++I     A    E  +   +M+        V  SV + E+ K  GK
Sbjct: 119 KRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSST---CVISSVYLSEIVKLLGK 175

Query: 146 MEEASQLLELMIQIGVR---PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVF 201
            +  ++ L +  QI  R   P A  YN+++      G + +  E++  M + G C  +  
Sbjct: 176 AKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTV 235

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +YS LI+ + K    + A+ L+ EM   G+ PT   Y TL    F++ +VE+A  +  EM
Sbjct: 236 TYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEM 295

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G     + Y  +I GL K G + +A  +F  +    C+ D+   + LI+ L K GRL
Sbjct: 296 KDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRL 355

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCA-DGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++  +LF  +       +VVTYN +I AL        +A   F  M+  G+AP    ++ 
Sbjct: 356 EVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSI 415

Query: 381 LMLGCIRNNETSKVVELLHRMDER 404
           L+ G  + N   K + LL  MDE+
Sbjct: 416 LIDGFCKTNRIEKALLLLEEMDEK 439


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 190/390 (48%), Gaps = 20/390 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A ALF  +          T++ ++  LC TG  + AL L  +M           +P+AV 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM----------PRPNAVT 149

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           Y T+I G C  G V  A E++ +M+++  I PD  TY ++I G+C      +A ++F EM
Sbjct: 150 YNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEM 209

Query: 122 MDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + QG V P+ V ++ ++   C  GK++ A Q  E M+Q GV      YN L+    + GR
Sbjct: 210 LTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGR 269

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A  +   M+  G   +VF+Y+ILINGYCK    + AL ++ EM  KG++ T VTY +
Sbjct: 270 ASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTS 329

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L        QV+   +LF    + G+  D   Y   I+  C  G +  A E+   +   +
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  +Y+ LI G C  GRL  A  L   + +  +  D+         LC +G+ D A 
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAE 441

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +L  +M  KG+ PD   + +L+ G    +E
Sbjct: 442 NLMKEMVGKGITPDDSTYISLIEGLTTVDE 471



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 165/312 (52%), Gaps = 18/312 (5%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C       A    +E++ Q  +PN VT++ ++   C  G+++ A +++ 
Sbjct: 116 TTTFNIMLRHLCATGKPVRA----LELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ P+ + Y TL+ G+C  GR+  A ++F  M + G    +   Y+ LI GYC 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL    +M+ +G+  TV TYN L   LF   +   A+ + +EMQR+G++ D + 
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G   +ALE+F  +          +Y+ LI    + G+++    LF    
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG-CIRNNET 391
           +  +  DVV YN +I++ CA G M++A ++  +ME K + PD V +NTL+ G C      
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFC------ 405

Query: 392 SKVVELLHRMDE 403
                LL R+DE
Sbjct: 406 -----LLGRLDE 412



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
             TF++++  LC  GK   A +LL  M     RPNA  YNT++ GFC  GRV  A E+  
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 190 SM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTLFIGLFE 247
            M E  G   + ++Y+ LI+G+CK   +E A  ++ EML++G + P+ V YN L  G  +
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
             +++ A +  ++M + GVA     Y   +  L  +G   +A  +   ++      D+ +
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+ LI+G CK G  K A E+F  + R  + A  VTY  +I+A    G++ +   LF    
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            KG+ PD V +N L+       +  +  E++  M+++ 
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 108/203 (53%), Gaps = 37/203 (18%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
           +A A+  +++  G  P+V TY+ LING C+ G+   AL +FEEM                
Sbjct: 272 DAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLI 331

Query: 46  --INGNGE-------FGVVCK----PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
              +  G+       F V  K    PD V+Y  +I+  C  G +++A E++ +M+ K I 
Sbjct: 332 YAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIP 391

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD VTYN++IRGFC     +EA+ L  EM  +G+QP++         LCKNG+ ++A  L
Sbjct: 392 PDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENL 443

Query: 153 LELMIQIGVRPNAFVYNTLMDGF 175
           ++ M+  G+ P+   Y +L++G 
Sbjct: 444 MKEMVGKGITPDDSTYISLIEGL 466



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 14/98 (14%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+ +TY+TLI G C  G    A  L +EM           +PD         GLCK G  
Sbjct: 392 PDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG------IQPDL--------GLCKNGQG 437

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           D A+ L+ +M  K I PD  TY S+I G    ++   A
Sbjct: 438 DDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSA 475


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 205/416 (49%), Gaps = 39/416 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A A F ++ A  C+P++ T++ +I GLC+ G    A  +F+EM N  G      KPD +
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEM-NRKG-----WKPDII 178

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT+++DGL K   +D+A++LL ++  + + P  VTY S I G C      EA +L  EM
Sbjct: 179 VYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238

Query: 122 --------------------------------MDQGVQPNVVTFSVIMDELCKNGKMEEA 149
                                           + +GV  +V  ++ ++  L    + +EA
Sbjct: 239 GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEA 298

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            ++ E M++ G  P+   Y  ++  FC  G++  A ++   M++ G + N   Y+ L++G
Sbjct: 299 QEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDG 358

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAA 268
           +        A+++YS ML K +KP++VTYN L +GL ++ Q   A  +  EM +R G+  
Sbjct: 359 FLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVP 418

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
              +YRT I GL K G   EA+++F  +       D  S + LI  L  + R+  A +L 
Sbjct: 419 TIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLL 478

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +PR  +  D + YN ++  LC   K+  A D+ ++M      PD   F  + LG
Sbjct: 479 RDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLG 534



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 39/385 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F ++   G +P++I Y++L++GL +      A  L +E+++         KP  V
Sbjct: 160 RACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRG------MKPTEV 213

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM----------------------------KD----K 89
            YT+ I GLCK G V++A +L+ +M                            KD    K
Sbjct: 214 TYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKK 273

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            +  DV  Y ++I G  Y   ++EA+ +F  M+ QG  P+  T+ +I+   CK GKM+ A
Sbjct: 274 GVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAA 333

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            +++E+M   G+  N  VYN+LMDGF    R   A  ++ +M     K ++ +Y+IL+ G
Sbjct: 334 CKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLG 393

Query: 210 YCKNKEIEGALSLYSEMLSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            CK  +   A  +  EM  + GI PT+V+Y TL  GL +  + + A  +F EM  +GV  
Sbjct: 394 LCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVP 453

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D  +  + I  L     + EA +L R +  +    D  +Y+ L+  LC   ++  AW++ 
Sbjct: 454 DCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVL 513

Query: 329 HSLPRGVLIADVVTYNIMIHALCAD 353
             +     + D  T+  M     AD
Sbjct: 514 VEMMDNSCVPDGSTFRAMKLGFKAD 538



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 194/447 (43%), Gaps = 66/447 (14%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEM-----INGNGEFGVVCKP-------------- 58
           +V +Y+ +I GLC  G    A  L +EM            G++ K               
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 59  ---------DAVIYTTIIDGLCKEGFVDKAKELLLQMKD--------------------- 88
                    D V YTT+I GL   G +D A EL  +M                       
Sbjct: 63  HSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKAHR 122

Query: 89  -------------KNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
                        +  +PD+ T+  VI G C A   N A  +F EM  +G +P+++ ++ 
Sbjct: 123 PDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTS 182

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++D L K   M+EA +LL+ ++  G++P    Y + + G C  GRV  A +L   M  M 
Sbjct: 183 LVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM- 241

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C   V     +  GY    +IE AL+L  EM+ KG+   V  Y  L  GLF + + + A 
Sbjct: 242 CAAEVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQ 299

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++F+ M R G   DT  Y   +   CK G +  A ++   +     E +   Y+ L+DG 
Sbjct: 300 EMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGF 359

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPD 374
               R + A  ++ ++ R ++   +VTYNI++  LC  G+   A  +  +M E  G+ P 
Sbjct: 360 LGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPT 419

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRM 401
            V++ TL+ G  +     + +++   M
Sbjct: 420 IVSYRTLIHGLGKAGRADEAIDVFTEM 446



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 191/404 (47%), Gaps = 11/404 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  +++A G + + +T+  ++  LC       AL+ F   ++   +       D V
Sbjct: 22  RAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHS-VSPRSDL------DVV 74

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GL   G +D A EL  +M     +  VV Y ++I     A+  ++A   F  M
Sbjct: 75  SYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRPDQAIACFERM 133

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P++ TF+V++  LCK GK+  A ++ + M + G +P+  VY +L+DG      +
Sbjct: 134 VARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMM 193

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A++L   + S G K    +Y+  I+G CKN  +E A  L  EM   G        + +
Sbjct: 194 DEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM---GKMCAAEVLHCI 250

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
           F G     ++E A  L DEM + GV  D   Y   I GL       EA E+F  +    C
Sbjct: 251 FGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGC 310

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D R+Y  ++   CK G+++ A ++   +    L A+   YN ++       +  +A +
Sbjct: 311 VPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAIN 370

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           ++  M  K V P  V +N LMLG  +  +T+    +L  M ER+
Sbjct: 371 VYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERD 414



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           LD+ SY+ +I GLC +GR   A+EL   +    +    VT+ I++ ALC   ++D+A   
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  +  +    D V++ TL++G   +       EL   M
Sbjct: 62  FHSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEM 99



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
           DV +YNI+I  LC  G+  +A++L  +MEA G+    V    ++       E  + +   
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 399 HRMDERN 405
           H +  R+
Sbjct: 63  HSVSPRS 69


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 202/388 (52%), Gaps = 9/388 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  PNV+T+ TLING C+ G    A  LF+ M     + G+   PD + Y+T+IDG  K 
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELFKVM----EQRGIA--PDLIAYSTLIDGYFKA 226

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +    +L  Q   K +  DVV ++S I  +        A  ++  M+ QG+ PNVVT+
Sbjct: 227 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTY 286

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           ++++  LC++G++ EA  +   +++ G+ P+   Y++L+DGFC  G +     L+  M  
Sbjct: 287 TILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIK 346

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           MG   +V  Y +L++G CK   +  AL    + L + I+P VV +N+L  G   +++ + 
Sbjct: 347 MGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDE 406

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A K+F  M  +G+  D     T +      G + E L LF  +  +  E D  ++  L+D
Sbjct: 407 ALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMD 466

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
             CK+ +  I  +LF  + R  + AD+   N++I+ L     +++A   F ++    + P
Sbjct: 467 AFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEP 526

Query: 374 DCVAFNTLMLGCI---RNNETSKVVELL 398
           D V +NT++ G     R +E +++ E+L
Sbjct: 527 DIVTYNTMICGYCSLRRLDEAARIFEML 554



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 197/373 (52%), Gaps = 14/373 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  ++ ++   G EP+V+TYS+LI+G C+ G+      L+E+MI       +   PD V
Sbjct: 301 EAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIK------MGYPPDVV 354

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           IY  ++DGLCK+G +  A    ++   ++I P+VV +NS+I G+C  N  +EA ++F  M
Sbjct: 355 IYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLM 414

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+V T + +M      G+++E   L   M ++G+ P+A  + TLMD FC   + 
Sbjct: 415 GIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKP 474

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +LF  M+      ++   +++IN   K + +E A   ++ +L   ++P +VTYNT+
Sbjct: 475 TIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTM 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + +++ A ++F+ ++      +       I  LCKN  +  AL +     I   
Sbjct: 535 ICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSII--- 591

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                SYS +IDGLCK GR+  A  +FH      ++ DVV Y I+I   C  G++ +A  
Sbjct: 592 -----SYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAAL 646

Query: 362 LFLDMEAKGVAPD 374
           L+  M   GV PD
Sbjct: 647 LYEHMLRNGVKPD 659



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 199/389 (51%), Gaps = 6/389 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  LF  ++  G  P++I YSTLI+G  + G   +   LF + ++         K D V
Sbjct: 196 RAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG------VKLDVV 249

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++++ ID   K G++  A ++  +M  + I+P+VVTY  +I+G C      EA  ++ ++
Sbjct: 250 VFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQI 309

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+VVT+S ++D  CK G +     L E MI++G  P+  +Y  L+DG C  G +
Sbjct: 310 LKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLM 369

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A    V       + NV  ++ LI+G+C+    + AL ++  M   GIKP V T  TL
Sbjct: 370 LHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTL 429

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                   +++    LF  M + G+  D  A+ T +D  CKN      L+LF  ++  K 
Sbjct: 430 MRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKI 489

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI   + +I+ L K   ++ A + F++L  G +  D+VTYN MI   C+  ++D+A  
Sbjct: 490 PADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAAR 549

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           +F  ++     P+ V    L+    +N++
Sbjct: 550 IFEMLKFTPFGPNAVTLTILIHTLCKNSD 578



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 197/400 (49%), Gaps = 9/400 (2%)

Query: 7   FTKLKAFGCEP-NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           F KL   G  P  V  +  +++ L R G    AL+ F  ++   G      + D V    
Sbjct: 96  FDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALD-FHRLVMERG-----FRVDIVSCNK 149

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+ GL  +  ++ A  +L  + D    P+VVT+ ++I GFC   + + A  LF  M  +G
Sbjct: 150 ILKGLSVDQ-IEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRG 208

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           + P+++ +S ++D   K G +    +L    +  GV+ +  V+++ +D +   G +  A 
Sbjct: 209 IAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAF 268

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++  M   G   NV +Y+ILI G C++  I  A  +Y ++L +G++P+VVTY++L  G 
Sbjct: 269 DVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGF 328

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +   F L+++M + G   D   Y   +DGLCK G ++ AL             ++
Sbjct: 329 CKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNV 388

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             ++ LIDG C+  R   A ++F  +    +  DV T   ++     +G++ +   LF  
Sbjct: 389 VVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFR 448

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           M   G+ PD VAF TLM    +N + +  ++L   M +RN
Sbjct: 449 MFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLM-QRN 487



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 14/170 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA+  F  L     EP+++TY+T+I G C       A  +FE +      FG    P+AV
Sbjct: 511 EASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEML--KFTPFG----PNAV 564

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +I  LCK   +D A         + I+P +++Y+ +I G C     +EA  +F + 
Sbjct: 565 TLTILIHTLCKNSDMDGAL--------RIISPSIISYSIIIDGLCKRGRVDEATNIFHQA 616

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           +D  + P+VV +++++   CK G++ EA+ L E M++ GV+P+  +   L
Sbjct: 617 IDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 182/350 (52%), Gaps = 1/350 (0%)

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C+P+ V Y  IID +C+EG VD+A+ELL  +  +   P+ V YN+V++G C      +A+
Sbjct: 12  CEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAE 71

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM+ +   PN  T +VI++ L + G +++ ++ LE M + G   N   YN ++ G 
Sbjct: 72  ELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGM 131

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V+ A EL  +M+S GCK ++ +Y+ L+ G C   + E A  L  +M      P  
Sbjct: 132 CEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDN 191

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           VT+NT+   L +   + +AF++F +M   G   ++  Y T I GL K G + +ALEL   
Sbjct: 192 VTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +       D + Y  L + L K  +++   ++ H L    +    V +N ++  LC +GK
Sbjct: 252 MASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGK 310

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            D A D+  DM + G  PD + +  L+ G        +  EL+ R+  R+
Sbjct: 311 TDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRD 360



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 1/321 (0%)

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDEL 140
           EL+  M+ +   P+VVTYN +I   C   D ++A+ L   +  +G +PN V ++ ++  L
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 141 CKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNV 200
           C   +  +A +LL+ M++    PN    N +++     G + +       M   GC  NV
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ +I+G C+   ++ AL L S M S G KP +VTYNTL  GL    Q E A +L  +
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
           M ++    D   + T I  LC+ G I++A E+F+ +    C  +  +YS +I GL K+G+
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 321 LKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNT 380
           ++ A EL + +       D + Y ++  +L  + K+++   +   ++  G++P  V FNT
Sbjct: 242 MEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 381 LMLGCIRNNETSKVVELLHRM 401
           ++L   RN +T   +++L  M
Sbjct: 301 VLLVLCRNGKTDYAIDVLADM 321



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 166/336 (49%), Gaps = 8/336 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   L + GC+PN + Y+T++ GLC     + A  L +EM+  N      C P+  
Sbjct: 34  QARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVREN------CPPNEA 87

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               I++ L ++G + K    L +M       +VVTYN+VI G C     + A  L   M
Sbjct: 88  TVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNM 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++VT++ ++  LC   + E+A +L+  M Q    P+   +NT++   C  G +
Sbjct: 148 QSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLI 207

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +A E+F  M   GC  N  +YS +I G  K  ++E AL L +EM SKG   T   Y  L
Sbjct: 208 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYN-TDKMYQLL 266

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++E   ++  ++Q  G++  T  + T +  LC+NG    A+++   +    C
Sbjct: 267 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGC 326

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVL 336
             D  +Y  LI+GL   G L+ A EL   L  R VL
Sbjct: 327 MPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVL 362



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 11/309 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  L  ++    C PN  T + ++N L R G         E+M     + G  C  + 
Sbjct: 68  VDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKM----SKHG--CTANV 121

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V Y  +I G+C++G VD A ELL  M+     PD+VTYN++++G C A+   +A+ L I+
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+ VTF+ I+  LC+ G + +A ++ + M + G  PN+  Y+T++ G    G+
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +A EL   M S G   +   Y +L     K  +IE  + +  ++   GI P  V +NT
Sbjct: 242 MEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           + + L    + + A  +  +M  +G   D   Y   I+GL   GY+ EA EL   L    
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL---- 356

Query: 301 CELDIRSYS 309
           C  D+ S S
Sbjct: 357 CSRDVLSNS 365



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 35/254 (13%)

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           EL   M + GC+ NV +Y+++I+  C+  +++ A  L + + S+G KP  V YNT+  GL
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 246 FEIHQVERAFKLFDEMQR-----------------------------------HGVAADT 270
             I +   A +L DEM R                                   HG  A+ 
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 271 WAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             Y   I G+C+ G++  ALEL   ++   C+ DI +Y+ L+ GLC + + + A EL   
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + +   + D VT+N +I  LC  G + +A ++F  M  KG  P+   ++T++ G  +  +
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 391 TSKVVELLHRMDER 404
             + +ELL+ M  +
Sbjct: 242 MEQALELLNEMASK 255



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 90/180 (50%)

Query: 226 MLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M ++G +P VVTYN +   +     V++A +L + +   G   +T  Y T + GLC    
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            V+A EL   +    C  +  + + +++ L + G L+        + +    A+VVTYN 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +I  +C  G +D A +L  +M++ G  PD V +NTL+ G    ++     EL+ +M + +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  +F ++   GC PN  TYST+I GL + G    AL L  EM +             
Sbjct: 208 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDK------ 261

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            +Y  + + L KE  +++  +++ +++D  I+P  V +N+V+   C    ++ A  +  +
Sbjct: 262 -MYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLAD 320

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
           M+  G  P+ +T+ ++++ L   G ++EA +L+  +    V  N+ + N
Sbjct: 321 MVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKN 369


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 182/337 (54%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P    +  ++ G CK G V  A+ +  ++  + + P VV++N++I G C + D  E  RL
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  +GV P+V TFS +++ LCK G+++E S L + M   G+ PN   + TL+DG C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V+ A + F  M + G + ++ +Y+ LING CK  +++ A  L +EM + G+KP  +T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           + TL  G  +   +E A ++   M   G+  D  A+   I GLC+ G + +A  +   + 
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  +Y+ +ID  CK G +K+ ++L   +     +  VVTYN +++ LC  G+M 
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKV 394
            A  L   M   GVAP+ + +N L+ G  ++  +  V
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV 582



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 175/326 (53%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           ++++  L L++ D    P +  +N ++ GFC A D   A+ +F E+  +G++P VV+F+ 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   CK+G +EE  +L  +M   GV P+ F ++ L++G C  GR++    LF  M   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N  +++ LI+G CK  +++ AL  +  ML++G++P +VTYN L  GL ++  ++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +L +EM   G+  D   + T IDG CK+G +  ALE+ R +     ELD  +++ LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C+ GR+  A  +   +       D  TY ++I   C  G +     L  +M++ G  P  
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           V +N LM G  +  +      LL  M
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAM 554



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 174/311 (55%), Gaps = 9/311 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +++ G  P+V T+S LINGLC+ G       LF+EM       G+V  P+ V +TT+IDG
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR----GLV--PNGVTFTTLIDG 362

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
            CK G VD A +    M  + + PD+VTYN++I G C   D  EA+RL  EM   G++P+
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            +TF+ ++D  CK+G ME A ++   M++ G+  +   +  L+ G C  GRV+ A  +  
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
            M S G K +  +Y+++I+ +CK  +++    L  EM S G  P VVTYN L  GL +  
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 542

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           Q++ A  L D M   GVA +   Y   +DG  K+G  V+ +++F + + L    D  SY+
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNSEKGLVT--DYASYT 599

Query: 310 CLIDGLCKSGR 320
            L++   K+ +
Sbjct: 600 ALVNESSKTSK 610



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 19/392 (4%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL+ ++   G  P +  ++ L++G C+ G    A  +F+E+           +P  V + 
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPTVVSFN 287

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I G CK G V++   L   M+ + + PDV T++++I G C     +E   LF EM  +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN VTF+ ++D  CK GK++ A +  ++M+  GVRP+   YN L++G C  G +  A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
           + L   M + G K +  +++ LI+G CK+ ++E AL +   M+ +GI+   V +  L  G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    +V  A ++  +M   G   D   Y   ID  CK G +    +L + ++       
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ L++GLCK G++K A  L  ++    +  + +TYNI++     DG       + +
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL-----DGHSKHGSSVDV 582

Query: 365 DM--EAKGVAPDCVAFNTLMLGCIRNNETSKV 394
           D+    KG+  D  ++  L+      NE+SK 
Sbjct: 583 DIFNSEKGLVTDYASYTALV------NESSKT 608



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 148/277 (53%), Gaps = 9/277 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E + LF ++   G  PN +T++TLI+G C+ G   +AL  F+ M+      GV  +PD V
Sbjct: 336 EGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQ----GV--RPDLV 389

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I+GLCK G + +A+ L+ +M    + PD +T+ ++I G C   D   A  +   M
Sbjct: 390 TYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++ + V F+ ++  LC+ G++ +A ++L  M+  G +P+   Y  ++D FC  G V
Sbjct: 450 VEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDV 509

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +L   M+S G    V +Y+ L+NG CK  +++ A  L   ML+ G+ P  +TYN L
Sbjct: 510 KMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNIL 569

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G    H       +F+  +  G+  D  +Y   ++
Sbjct: 570 LDG-HSKHGSSVDVDIFNSEK--GLVTDYASYTALVN 603



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 130/257 (50%)

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
           ++E +  L   ++  G  P  + +N LM GFC  G V  A+ +F  +   G +  V S++
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G CK+ ++E    L   M S+G+ P V T++ L  GL +  +++    LFDEM   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+  +   + T IDG CK G +  AL+ F+ +       D+ +Y+ LI+GLCK G LK A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L + +    L  D +T+  +I   C DG M+ A ++   M  +G+  D VAF  L+ G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 385 CIRNNETSKVVELLHRM 401
             R         +L  M
Sbjct: 468 LCREGRVHDAGRMLTDM 484



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 124/223 (55%)

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + R+  L++ +   G    ++ +++L++G+CK  ++  A  ++ E+  +G++PTVV++NT
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G  +   VE  F+L   M+  GV  D + +   I+GLCK G + E   LF  +    
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              +  +++ LIDG CK G++ +A + F  +    +  D+VTYN +I+ LC  G + +A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            L  +M A G+ PD + F TL+ GC ++ +    +E+  RM E
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVE 451


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 203/401 (50%), Gaps = 6/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A   F  +   G +P+V T + ++  + +   T +  +LF EM +       +C P+   
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG-----IC-PNVGT 235

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  +I+GLC EG + KA  LL QM++    P +VTYN+++  +C       A  L   M+
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +V T++V +D LC N +  +A  LL+ M +  + PN   YNTL++GF   G++ 
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A ++F  M       N  +Y+ LI G+C   + E AL L   M + G++   VTY TL 
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  + E A +L + M+ + +     AY   IDGLCKNG + EA++L   +      
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +YS LI+G C+ G +K A E+   + R  L+ + + Y+ +I+  C  G + +A  +
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  M   G   D    N L+    R+ +  +  + L  M  
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 195/403 (48%), Gaps = 12/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---P 58
           +A  L  +++  G  P ++TY+TL+N  C+ G    A+ L + MI         CK    
Sbjct: 251 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI---------CKGIEA 301

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D   Y   ID LC      KA  LL +M+ + I+P+ VTYN++I GF        A ++F
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM    + PN VT++ ++   C  G  EEA +LL+ M   G+R N   Y TL++G C  
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
            +   AK L   M          +Y++LI+G CKN  ++ A+ L   M   G+ P V+TY
Sbjct: 422 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 481

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           ++L  G   +  ++ A ++   M R G+  +   Y T I   C++G + EA++++  +  
Sbjct: 482 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 541

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  + + L+  LC+ G+L  A +    + R  L+ + +TY+ +I+   + G    
Sbjct: 542 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 601

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A   F DM   G  P    + +L+ G  +     +  + L+R+
Sbjct: 602 AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 644



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 203/471 (43%), Gaps = 77/471 (16%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K++     PN +TY+TLING  + G   VA  +F EM     +F +   P+ V
Sbjct: 321 KAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM----SKFDL--SPNCV 374

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G C  G  ++A  LL  M+   +  + VTY +++ G C       AKRL   M
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 434

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               +    + ++V++D LCKNG ++EA QL+  M + GV P+   Y++L++GFC  G +
Sbjct: 435 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 494

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM--------------- 226
             AKE+   M   G   N   YS LI  +C++  +  A+ +Y+ M               
Sbjct: 495 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVL 554

Query: 227 -------------------LSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                              +S+ G+ P  +TY+ +  G   I     AF  FD+M + G 
Sbjct: 555 VSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ 614

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
               + Y + + GLCK G +VEA +    L  +   +D   Y+ L+   CKSG L  A  
Sbjct: 615 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 674

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKM------------------------------ 356
           LF  + +  ++ D  TY+ ++  LC  GK                               
Sbjct: 675 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 734

Query: 357 ------DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
                   A   F +M  KG  PD VAFN ++  C R  +  K  +    M
Sbjct: 735 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF ++   G  PNV T++ LINGLC  G+   A NL ++M     E G V  P  V Y 
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM----EENGFV--PTIVTYN 272

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+++  CK+G    A EL+  M  K I  DV TYN  I   C  + S +A  L  +M  +
Sbjct: 273 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 332

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PN VT++ +++   K GK+  A+Q+   M +  + PN   YN L+ G C  G    A
Sbjct: 333 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             L   ME+ G + N  +Y  L+NG CK+++ E A  L   M    +    + Y  L  G
Sbjct: 393 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   ++ A +L   M + GV  D   Y + I+G C+ G I  A E+   +      L+
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
              YS LI   C+ G +  A +++  +      AD  T N+++ +LC DGK+ +A     
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572

Query: 365 DMEAKGVAPDCVAFNTLMLG 384
            M   G+ P+ + ++ ++ G
Sbjct: 573 HMSRIGLVPNSITYDCIING 592



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 192/404 (47%), Gaps = 5/404 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ALF K+      P+  TYS+L+ GLCR G  + A+ LF   +     F     P+ V
Sbjct: 671  EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF-----PNHV 725

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +YT ++DGL K G    A     +M  K   PD V +N++I          +A   F  M
Sbjct: 726  MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               GV PN+ T+++++    K   +     L   M++ G+ P+   +++L+ G   +G  
Sbjct: 786  RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +L   M   G   + F+++ILIN Y ++ ++  A  L + M + G+ P   TYN +
Sbjct: 846  DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            F GL +      +  +  EM  +GV      Y T I+G+C+ G I  A +L   +  L  
Sbjct: 906  FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                 + S ++ GL   G+ + A  +   + R  L+  + T+  ++H  C D K+ +A  
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L   ME  G+  D VA+N L++G   N +++   EL   M  R+
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 30  CRTGHTIVALNLFEEM-----------INGNGEFGVV------CKPDAVIYTTIIDGLCK 72
           C T H +V   +++             I     FG +      C     ++  +I    K
Sbjct: 116 CLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLK 175

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           EG +D A E    +      P V T N ++        +     LF EM D+G+ PNV T
Sbjct: 176 EGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGT 235

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           F+++++ LC  G +++A  LL+ M + G  P    YNTL++ +C  GR   A EL   M 
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G + +V +Y++ I+  C N     A  L  +M  + I P  VTYNTL  G  +  ++ 
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A ++F+EM +  ++ +   Y   I G C  G   EAL L   +      L+  +Y  L+
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCK  + ++A  L   +    ++   + Y ++I  LC +G +D+A  L  +M   GV 
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           PD + +++L+ G  R        E++ RM
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRM 504



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 195/402 (48%), Gaps = 7/402 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A + F  +   G  P+  TY +L+ GLC+ G+ + A      +    G        D+
Sbjct: 600 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------DS 653

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y T++   CK G + +A  L  +M   N+ PD  TY+S++ G C    +  A  LF  
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 121 MMDQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M +G   PN V ++ ++D L K G  + A    E M++ G  P+   +N ++D     G
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ +A + F +M   G   N+ +Y+IL++G+ K + +   LSLYS M+ +GI P  +T++
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L +GL +    +   KL  +M   G  AD + +   I+   ++G + +A +L   +  L
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +Y+ + +GL K    + +  + H +    +I     Y  +I+ +C  G +  A
Sbjct: 894 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 953

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             L  +MEA G     VA + ++ G +   +T   + +L  M
Sbjct: 954 FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 995



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            PN + Y+ L++GL + GH   A   FEEM+         C PD V +  IID   + G +
Sbjct: 722  PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSCSRRGQM 775

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             KA +    M+   + P++ TYN ++ GF           L+  MM +G+ P+ +TF  +
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 835

Query: 137  MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
            +  L K+G  +   +LL  MI  G   + F +N L++ +  +G++ +A +L   M ++G 
Sbjct: 836  ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 895

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              +  +Y+ + NG  K      +  +  EML  G+ P    Y TL  G+  +  ++ AFK
Sbjct: 896  FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 955

Query: 257  LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            L DEM+  G  +   A    + GL   G   +A+ +   +  ++    I +++ L+   C
Sbjct: 956  LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015

Query: 317  KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +  ++  A +L   +    L  DVV YN++I  +CA+G    A +L+ +M  + + P+  
Sbjct: 1016 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075

Query: 377  AFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  L+      N   +  +LL  + ER
Sbjct: 1076 TYAVLVDAISAANNLIQGEKLLTDLQER 1103



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 6/338 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            M+A   F+ ++ +G  PN+ TY+ L++G  +    +  L+L+  M+   G F     PD 
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR-EGIF-----PDK 829

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            + + ++I GL K G  D   +LL +M  +    D  T+N +I  +  +    +A  L   
Sbjct: 830  LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 889

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M   GV P+  T++ I + L K     E++ +L  M++ GV P    Y TL++G C  G 
Sbjct: 890  MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +  A +L   ME++G   +  + S ++ G     + E A+ +   ML   + PT+ T+ T
Sbjct: 950  IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1009

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L        ++  A KL   M+  G+  D  AY   I G+C NG    A EL+  +R   
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
               +I +Y+ L+D +  +  L    +L   L    LI+
Sbjct: 1070 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1107



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 18/280 (6%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-----------------TGRVN 182
           L K    + A  +L  + Q+G+   + ++  LMD + L                  G ++
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKS-IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 180

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A E F  +  +G K +V++ ++++    K+K  E   SL+ EM  KGI P V T+N L 
Sbjct: 181 YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 240

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL     +++A  L  +M+ +G       Y T ++  CK G    A+EL   +     E
Sbjct: 241 NGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE 300

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D+ +Y+  ID LC + R   A+ L   + + ++  + VTYN +I+    +GK+  A  +
Sbjct: 301 ADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 360

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           F +M    ++P+CV +N L+ G     +  + + LL  M+
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           PN +TY+T+I G C  G     + +  EM    G       PD   Y T+I G CK G V
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGG-----IAPDKYTYATVISGWCKVGKV 199

Query: 77  DKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           + A ++  +M  +  + P+ V YN++I G+C   +   A R   EM+D+GV   V T+++
Sbjct: 200 EDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNL 259

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
            +  L   G+  EA  L+E M + G+ P+AF YN L++G+C  G+  +A ++F  M   G
Sbjct: 260 FVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKG 319

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI+       ++    L+++ + +GI+P +  YN L         ++RAF
Sbjct: 320 IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAF 379

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++  EM++  +  D   Y T + GLC  G + EA  L   +     + D+ SY+ LI G 
Sbjct: 380 EIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGY 439

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
              G +K A ++   +        ++TYN MI  LC +G+   A DL  +M   G+ PD 
Sbjct: 440 SMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDD 499

Query: 376 VAFNTLMLGCIRNNE 390
             + +L+ G    +E
Sbjct: 500 STYISLIEGLTTEDE 514



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 188/386 (48%), Gaps = 12/386 (3%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +  T++ ++  LC  G  + AL L  +M +          P+AV Y T+I G C  G V 
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS----------PNAVTYNTVIAGFCARGRVQ 164

Query: 78  KAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVTFSV 135
              E++ +M+++  I PD  TY +VI G+C      +A ++F EM+ +G V+PN V ++ 
Sbjct: 165 AGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           ++   C  G +E A +    M+  GV      YN  +    + GR   A  L   M   G
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              + F+Y+ILINGYCK  + + A+ ++  M+ KGI+ TVVTY +L   L     V+   
Sbjct: 285 LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETD 344

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           +LF++  R G+  D + Y   I+  C  G +  A E+   +   +   D  +Y+ L+ GL
Sbjct: 345 RLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGL 404

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
           C  GRL  A  L   + +  +  D+V+YN +I      G +  A  +  +M  KG  P  
Sbjct: 405 CLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTL 464

Query: 376 VAFNTLMLGCIRNNETSKVVELLHRM 401
           + +N ++ G   N +     +L+  M
Sbjct: 465 LTYNAMIKGLCLNGQGGDAEDLVKEM 490



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 177/348 (50%), Gaps = 5/348 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+  TY+T+I+G C+ G    A  +F+EM+   G+     +P+AV+Y  +I G C +
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLT-EGK----VEPNAVMYNALIGGYCDQ 232

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G ++ A     +M D+ ++  V TYN  +        + EA  L  EM ++G+ P+  T+
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTY 292

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++  CK GK ++A ++ E+M+  G+R     Y +L+    + G V     LF     
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR 352

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + ++F Y+ LIN +C   +++ A  +  EM  K I P  VTYNTL  GL  + +++ 
Sbjct: 353 RGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  L +EM + G+  D  +Y T I G    G I +A+++   +        + +Y+ +I 
Sbjct: 413 ARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIK 472

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           GLC +G+   A +L   +    +  D  TY  +I  L  + +   A D
Sbjct: 473 GLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGD 520



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 16/311 (5%)

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL- 153
             T+N ++R  C A     A    +E++ Q   PN VT++ ++   C  G+++   +++ 
Sbjct: 116 TTTFNIMLRHLCTAGKPVRA----LELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMR 171

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ P+ + Y T++ G+C  G+V  A ++F  M + G  + N   Y+ LI GYC 
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E AL    EM+ +G+  TV TYN     LF   +   A  L +EM   G+A D + 
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y   I+G CK G   +A+++F  +        + +Y+ LI  L   G ++    LF+   
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
           R  +  D+  YN +I++ C  G MD+A ++  +ME K + PD V +NTLM G        
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLC------ 405

Query: 393 KVVELLHRMDE 403
               LL R+DE
Sbjct: 406 ----LLGRLDE 412



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 34/312 (10%)

Query: 2   EAAALFTKLKAFG-CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----------- 49
           +A  +F ++   G  EPN + Y+ LI G C  G+  VAL    EM++             
Sbjct: 201 DATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLF 260

Query: 50  --------------------GEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDK 89
                               GE G+   PDA  Y  +I+G CKEG   KA ++   M  K
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLA--PDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
            I   VVTY S+I          E  RLF + + +G++P++  ++ +++  C  G M+ A
Sbjct: 319 GIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRA 378

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
            +++  M +  + P+   YNTLM G CL GR++ A+ L   M   G + ++ SY+ LI+G
Sbjct: 379 FEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISG 438

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           Y    +I+ A+ +  EM+ KG  PT++TYN +  GL    Q   A  L  EM  +G+  D
Sbjct: 439 YSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPD 498

Query: 270 TWAYRTFIDGLC 281
              Y + I+GL 
Sbjct: 499 DSTYISLIEGLT 510


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/273 (38%), Positives = 161/273 (58%), Gaps = 11/273 (4%)

Query: 12  AFGCEPNVITYSTLINGLCRTG-HTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           A G + +  +Y TLINGLC+ G  T  AL L  +            +PD V+YTT+ID +
Sbjct: 133 ARGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQAF----------EPDVVMYTTVIDNM 182

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK+ FV+ A +L  +M    I+P+VVTY ++I GFC      EA  LF +M+ + + PNV
Sbjct: 183 CKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNV 242

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
            TF+ ++D  CK GK+EEA  +L  M++  ++ +   Y++LM+G+CL   V +A+ +F +
Sbjct: 243 YTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKT 302

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M      ++V SY+I+IN +CK K ++ A+ L+ EM  K I P VVTY+TL  GL +  +
Sbjct: 303 MAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGR 362

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +  A +L DEM   G   +   Y   +D LCKN
Sbjct: 363 LSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 160/296 (54%), Gaps = 8/296 (2%)

Query: 23  STLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKEL 82
           +T I G+C+TG    ALN   +++   G F V    D   Y T+I+GLCK G   +A   
Sbjct: 108 TTPIKGICQTGDIQRALNFHYKVVVARG-FDV----DHYSYGTLINGLCKVGGDTRAA-- 160

Query: 83  LLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCK 142
            LQ+  +   PDVV Y +VI   C     N+A  L+ EM+  G+ PNVVT++ ++D  C 
Sbjct: 161 -LQLLRQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCV 219

Query: 143 NGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS 202
            GK+EEA  L + MI   + PN + +N L+D FC  G++  AK +  +M     K +V +
Sbjct: 220 VGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVA 279

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YS L+NGYC   E+  A S++  M  + +   V +YN +     ++  V+ A KLF+EM 
Sbjct: 280 YSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMP 339

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
              +  D   Y T IDGLCK+G +  A+EL   +       +I +Y  ++D LCK+
Sbjct: 340 LKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 160/302 (52%), Gaps = 6/302 (1%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMK-DKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           TT I G+C+ G + +A     ++   +  + D  +Y ++I G C       A    ++++
Sbjct: 108 TTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA---LQLL 164

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            Q  +P+VV ++ ++D +CK+  + +A  L   M+  G+ PN   Y  L+DGFC+ G++ 
Sbjct: 165 RQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLE 224

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  LF  M S     NV++++ L++ +CK  +IE A ++ + M+ K +K  VV Y++L 
Sbjct: 225 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 284

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G   +++V +A  +F  M    ++ D  +Y   I+  CK   + EA++LF  + + +  
Sbjct: 285 NGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF 344

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA--DGKMDKAH 360
            D+ +Y  LIDGLCKSGRL  A EL   +       +++TY  ++  LC   DG +    
Sbjct: 345 PDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHDGVLSSGK 404

Query: 361 DL 362
            L
Sbjct: 405 SL 406



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 135/231 (58%), Gaps = 8/231 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L+ ++ A G  PNV+TY+ LI+G C  G    AL LF++MI+ N        P+  
Sbjct: 190 DAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISEN------INPNVY 243

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++D  CKEG +++AK +L  M +K++  DVV Y+S++ G+C  N+  +A+ +F  M
Sbjct: 244 TFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTM 303

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ +  +V +++++++E CK   ++EA +L E M    + P+   Y+TL+DG C +GR+
Sbjct: 304 AERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRL 363

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           + A EL   M+  G   N+ +Y  +++  CKN   +G LS    + S G+ 
Sbjct: 364 SYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH--DGVLSSGKSLPSCGLS 412



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 147/278 (52%), Gaps = 4/278 (1%)

Query: 102 IRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
           I+G C   D   A     +++  +G   +  ++  +++ LCK G    A+  L+L+ Q  
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA--LQLLRQ-A 167

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P+  +Y T++D  C    VN A +L+  M + G   NV +Y+ LI+G+C   ++E AL
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ +M+S+ I P V T+N L     +  ++E A  + + M    + +D  AY + ++G 
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGY 287

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           C    + +A  +F+T+   +   D+RSY+ +I+  CK   +  A +LF  +P   +  DV
Sbjct: 288 CLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
           VTY+ +I  LC  G++  A +L  +M+ +G  P+ + +
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITY 385



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 136/266 (51%), Gaps = 4/266 (1%)

Query: 140 LCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKH 198
           +C+ G ++ A     ++++  G   + + Y TL++G C  G   RA    + +     + 
Sbjct: 114 ICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA---LQLLRQAFEP 170

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V  Y+ +I+  CK+  +  A  LY EM++ GI P VVTY  L  G   + ++E A  LF
Sbjct: 171 DVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLF 230

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
            +M    +  + + +   +D  CK G I EA  +  T+     + D+ +YS L++G C  
Sbjct: 231 KKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLV 290

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
             +  A  +F ++    L  DV +YNIMI+  C    +D+A  LF +M  K + PD V +
Sbjct: 291 NEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTY 350

Query: 379 NTLMLGCIRNNETSKVVELLHRMDER 404
           +TL+ G  ++   S  +EL+  MD+R
Sbjct: 351 HTLIDGLCKSGRLSYAMELVDEMDDR 376



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 6/164 (3%)

Query: 244 GLFEIHQVERAFKL-FDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLRILKC 301
           G+ +   ++RA    +  +   G   D ++Y T I+GLCK  G    AL+L R       
Sbjct: 113 GICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQ----AF 168

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E D+  Y+ +ID +CK   +  A++L++ +    +  +VVTY  +I   C  GK+++A  
Sbjct: 169 EPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALG 228

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LF  M ++ + P+   FN L+    +  +  +   +L+ M E++
Sbjct: 229 LFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKD 272


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 207/403 (51%), Gaps = 7/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A +LF ++   G  P+  TY+ LI+ LC+      ALNL+E+M     E GV  KP  V
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM----NETGV--KPYIV 422

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y +++   C  G +D+A +L  +M  K   P+VVTY ++++G       ++A  L  EM
Sbjct: 423 TYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM 482

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N  T++ +++ LC  G++ E  ++L+     G  P A  YN++++GF   G +
Sbjct: 483 KQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  ++  M + G   N+ +Y+  I+GYCK    + AL + +++  KG++P +  YN+L
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   +  A ++   M + G+  +   Y +FI G      + EAL L+  +     
Sbjct: 603 IFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGI 662

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +LD  +Y+ LIDG  K G +  A +L+  +     I D +T+  + H LC +G +D A  
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L  +M    + P+ + +N L+ G +RN +  +   L   M ER
Sbjct: 723 LLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 192/381 (50%), Gaps = 6/381 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+   G +P ++TY +L+   C  G    A+ L+ EM  G G       P+ V
Sbjct: 404 EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM-PGKG-----FTPNVV 457

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT++ G   +   DKA  LL +MK   ++ +  TYN++I G C      E   +    
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF 517

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P  +T++ I++   K G M  A  + + M   G+ PN   Y + +DG+C T   
Sbjct: 518 ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   +   G + ++ +Y+ LI G+C+   +  AL +   ML  G+ P +  YN+ 
Sbjct: 578 DLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   +  +E A +L+++M + G+  DT  Y T IDG  K+G +  AL+L+  +     
Sbjct: 638 ITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGN 697

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ L  GLC++G +  A +L   + R  +  +V+ YN++I+    +GK+ +A  
Sbjct: 698 IPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFR 757

Query: 362 LFLDMEAKGVAPDCVAFNTLM 382
           L  +M  + + PD   ++ L+
Sbjct: 758 LHDEMLERKIMPDDTTYDILV 778



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+T++   G  PNV+TY+TL+ G         A  L  EM     + GV C  +  
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM----KQNGVSC--NDY 492

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I+GLC  G V +  E+L + + +   P  +TYNS+I GF  A     A  ++ +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+VT++  +D  CK    + A ++L  +   G+RP+   YN+L+ GFC  G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++ V M   G   N+  Y+  I GY   K +E AL LY +M+ +GI     TY TL
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  +   V  A KL+ EM   G   D   +     GLC+NG I +A +L   +  L  
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI--HALCADGKMD 357
             ++  Y+ LI+G  ++G+L+ A+ L   +    ++ D  TY+I++   +L +D  +D
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPID 790



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 191/383 (49%), Gaps = 7/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +  +L A G + +V+  +TL++G C       AL++FEE +      G+V  P  V
Sbjct: 265 EALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD----GLV--PTDV 318

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I G  +EG  +KA EL  QM+D  + P    +N VI+G        +A  LF EM
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  T+++++  LC+  K+ EA  L E M + GV+P    Y++L+  +C+ G +
Sbjct: 379 ADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCM 437

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +L+  M   G   NV +Y+ L+ G+      + A +L +EM   G+     TYNTL
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL  + +V    ++    +  G       Y + I+G  K G +  A  +++ +     
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +I +Y+  IDG CK+    +A ++ + +    L  D+  YN +I   C +G M  A  
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           + + M   G+ P+   +N+ + G
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITG 640



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 193/426 (45%), Gaps = 30/426 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING---------NGEF 52
           +A  LF ++ A   EP+    S  I  LC+      AL +  +M +          N   
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV 254

Query: 53  GVVCKP--------------------DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            V+ K                       V+ TT++ G C +  V KA ++  +     + 
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P  VTY  +IRG        +A  L  +M D G+ P+   F++++  L  +   ++A  L
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            + M   G+ P+AF YN L+   C   ++  A  L+  M   G K  + +Y  L+  YC 
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  ++ A+ LY+EM  KG  P VVTY TL  G       ++A+ L  EM+++GV+ + + 
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I+GLC  G + E  E+ +            +Y+ +I+G  K+G +  A+ ++  + 
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  ++VTY   I   C     D A  +  D+  KG+ PD  A+N+L+ G  +    S
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613

Query: 393 KVVELL 398
             +++L
Sbjct: 614 HALQVL 619



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 1/319 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
           +M+ K    D   ++ V+R        ++A RLF EM    ++P+    SV +  LCK  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
               A  +L  M   G  P  F +N+++D     GR+  A  +   + + G K +V   +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L++GYC  +E+  AL ++ E L  G+ PT VTY  L  G  E    E+A++L  +M+ H
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+   T  +   I GL  +    +A+ LF+ +       D  +Y+ LI  LC+  +++ A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             L+  +    +   +VTY+ ++   C +G MD+A  L+ +M  KG  P+ V + TLM G
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 385 CIRNNETSKVVELLHRMDE 403
            I      K   LL  M +
Sbjct: 466 HINKAAFDKAYALLAEMKQ 484



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 1/317 (0%)

Query: 85  QMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNG 144
            M+ + + PD  +   ++     +  + +A  L  EM  +G   +   F V+M    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 145 KMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYS 204
             ++A +L + M    + P+  V +  +   C     NRA  +   M+  G     F+++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +++   K   +E AL +  E+L+ G K +VV   TL  G     +V +A  +F+E  R 
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIA 324
           G+      Y   I G  + G   +A EL R +R          ++ +I GL      K A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             LF  +     I D  TYNI+IH LC   K+ +A +L+  M   GV P  V +++L+L 
Sbjct: 372 VSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC 430

Query: 385 CIRNNETSKVVELLHRM 401
              N    + V+L   M
Sbjct: 431 YCVNGCMDEAVKLYTEM 447



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 90/214 (42%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
           SME+ G   +  S + L+    ++     AL+L +EM  KG       ++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
             + A +LFDEM    +  D       I  LCK      AL + R ++         +++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            ++D L K GR++ A  +   L        VV    ++H  C   ++ KA D+F +    
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           G+ P  V +  L+ GC       K  EL  +M +
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 203/401 (50%), Gaps = 6/401 (1%)

Query: 3    AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
            A   F  +   G +P+V T + ++  + +   T +  +LF EM +       +C P+   
Sbjct: 933  AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG-----IC-PNVGT 986

Query: 63   YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            +  +I+GLC EG + KA  LL QM++    P +VTYN+++  +C       A  L   M+
Sbjct: 987  FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046

Query: 123  DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             +G++ +V T++V +D LC N +  +A  LL+ M +  + PN   YNTL++GF   G++ 
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             A ++F  M       N  +Y+ LI G+C   + E AL L   M + G++   VTY TL 
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             GL +  + E A +L + M+ + +     AY   IDGLCKNG + EA++L   +      
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             D+ +YS LI+G C+ G +K A E+   + R  L+ + + Y+ +I+  C  G + +A  +
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286

Query: 363  FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +  M   G   D    N L+    R+ +  +  + L  M  
Sbjct: 1287 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 1327



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 203/471 (43%), Gaps = 77/471 (16%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            +A  L  K++     PN +TY+TLING  + G   VA  +F EM     +F +   P+ V
Sbjct: 1072 KAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM----SKFDL--SPNCV 1125

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             Y  +I G C  G  ++A  LL  M+   +  + VTY +++ G C       AKRL   M
Sbjct: 1126 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERM 1185

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +    + ++V++D LCKNG ++EA QL+  M + GV P+   Y++L++GFC  G +
Sbjct: 1186 RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNI 1245

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM--------------- 226
              AKE+   M   G   N   YS LI  +C++  +  A+ +Y+ M               
Sbjct: 1246 KSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVL 1305

Query: 227  -------------------LSK-GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                               +S+ G+ P  +TY+ +  G   I     AF  FD+M + G 
Sbjct: 1306 VSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ 1365

Query: 267  AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
                + Y + + GLCK G +VEA +    L  +   +D   Y+ L+   CKSG L  A  
Sbjct: 1366 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 1425

Query: 327  LFHSLPRGVLIADVVTYNIMIHALCADGKM------------------------------ 356
            LF  + +  ++ D  TY+ ++  LC  GK                               
Sbjct: 1426 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485

Query: 357  ------DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
                    A   F +M  KG  PD VAFN ++  C R  +  K  +    M
Sbjct: 1486 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 195/403 (48%), Gaps = 12/403 (2%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCK---P 58
            +A  L  +++  G  P ++TY+TL+N  C+ G    A+ L + MI         CK    
Sbjct: 1002 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI---------CKGIEA 1052

Query: 59   DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            D   Y   ID LC      KA  LL +M+ + I+P+ VTYN++I GF        A ++F
Sbjct: 1053 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 1112

Query: 119  IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             EM    + PN VT++ ++   C  G  EEA +LL+ M   G+R N   Y TL++G C  
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 1172

Query: 179  GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             +   AK L   M          +Y++LI+G CKN  ++ A+ L   M   G+ P V+TY
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 1232

Query: 239  NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            ++L  G   +  ++ A ++   M R G+  +   Y T I   C++G + EA++++  +  
Sbjct: 1233 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 1292

Query: 299  LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 D  + + L+  LC+ G+L  A +    + R  L+ + +TY+ +I+   + G    
Sbjct: 1293 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 1352

Query: 359  AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            A   F DM   G  P    + +L+ G  +     +  + L+R+
Sbjct: 1353 AFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 5    ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
            +LF ++   G  PNV T++ LINGLC  G+   A NL ++M     E G V  P  V Y 
Sbjct: 970  SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM----EENGFV--PTIVTYN 1023

Query: 65   TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            T+++  CK+G    A EL+  M  K I  DV TYN  I   C  + S +A  L  +M  +
Sbjct: 1024 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 1083

Query: 125  GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
             + PN VT++ +++   K GK+  A+Q+   M +  + PN   YN L+ G C  G    A
Sbjct: 1084 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 1143

Query: 185  KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              L   ME+ G + N  +Y  L+NG CK+++ E A  L   M    +    + Y  L  G
Sbjct: 1144 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203

Query: 245  LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
            L +   ++ A +L   M + GV  D   Y + I+G C+ G I  A E+   +      L+
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263

Query: 305  IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
               YS LI   C+ G +  A +++  +      AD  T N+++ +LC DGK+ +A     
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323

Query: 365  DMEAKGVAPDCVAFNTLMLG 384
             M   G+ P+ + ++ ++ G
Sbjct: 1324 HMSRIGLVPNSITYDCIING 1343



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 192/404 (47%), Gaps = 5/404 (1%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            EA ALF K+      P+  TYS+L+ GLCR G  + A+ LF   +     F     P+ V
Sbjct: 1422 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLF-----PNHV 1476

Query: 62   IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +YT ++DGL K G    A     +M  K   PD V +N++I          +A   F  M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 122  MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               GV PN+ T+++++    K   +     L   M++ G+ P+   +++L+ G   +G  
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 182  NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
            +   +L   M   G   + F+++ILIN Y ++ ++  A  L + M + G+ P   TYN +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            F GL +      +  +  EM  +GV      Y T I+G+C+ G I  A +L   +  L  
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 302  ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
                 + S ++ GL   G+ + A  +   + R  L+  + T+  ++H  C D K+ +A  
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 362  LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
            L   ME  G+  D VA+N L++G   N +++   EL   M  R+
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 30   CRTGHTIVALNLFEEM-----------INGNGEFGVV------CKPDAVIYTTIIDGLCK 72
            C T H +V   +++             I     FG +      C     ++  +I    K
Sbjct: 867  CLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLK 926

Query: 73   EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            EG +D A E    +      P V T N ++        +     LF EM D+G+ PNV T
Sbjct: 927  EGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGT 986

Query: 133  FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
            F+++++ LC  G +++A  LL+ M + G  P    YNTL++ +C  GR   A EL   M 
Sbjct: 987  FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046

Query: 193  SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
              G + +V +Y++ I+  C N     A  L  +M  + I P  VTYNTL  G  +  ++ 
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106

Query: 253  RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
             A ++F+EM +  ++ +   Y   I G C  G   EAL L   +      L+  +Y  L+
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 313  DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
            +GLCK  + ++A  L   +    ++   + Y ++I  LC +G +D+A  L  +M   GV 
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 373  PDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            PD + +++L+ G  R        E++ RM
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRM 1255



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 195/402 (48%), Gaps = 7/402 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            + A + F  +   G  P+  TY +L+ GLC+ G+ + A      +    G        D+
Sbjct: 1351 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------DS 1404

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V+Y T++   CK G + +A  L  +M   N+ PD  TY+S++ G C    +  A  LF  
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 121  MMDQGVQ-PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
             M +G   PN V ++ ++D L K G  + A    E M++ G  P+   +N ++D     G
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 180  RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++ +A + F +M   G   N+ +Y+IL++G+ K + +   LSLYS M+ +GI P  +T++
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +L +GL +    +   KL  +M   G  AD + +   I+   ++G + +A +L   +  L
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 300  KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                D  +Y+ + +GL K    + +  + H +    +I     Y  +I+ +C  G +  A
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 1704

Query: 360  HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              L  +MEA G     VA + ++ G +   +T   + +L  M
Sbjct: 1705 FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 1746



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 6/388 (1%)

Query: 17   PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
            PN + Y+ L++GL + GH   A   FEEM+         C PD V +  IID   + G +
Sbjct: 1473 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSCSRRGQM 1526

Query: 77   DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
             KA +    M+   + P++ TYN ++ GF           L+  MM +G+ P+ +TF  +
Sbjct: 1527 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 1586

Query: 137  MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
            +  L K+G  +   +LL  MI  G   + F +N L++ +  +G++ +A +L   M ++G 
Sbjct: 1587 ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 1646

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              +  +Y+ + NG  K      +  +  EML  G+ P    Y TL  G+  +  ++ AFK
Sbjct: 1647 FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 1706

Query: 257  LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
            L DEM+  G  +   A    + GL   G   +A+ +   +  ++    I +++ L+   C
Sbjct: 1707 LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1766

Query: 317  KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            +  ++  A +L   +    L  DVV YN++I  +CA+G    A +L+ +M  + + P+  
Sbjct: 1767 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1826

Query: 377  AFNTLMLGCIRNNETSKVVELLHRMDER 404
             +  L+      N   +  +LL  + ER
Sbjct: 1827 TYAVLVDAISAANNLIQGEKLLTDLQER 1854



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 6/338 (1%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            M+A   F+ ++ +G  PN+ TY+ L++G  +    +  L+L+  M+   G F     PD 
Sbjct: 1527 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR-EGIF-----PDK 1580

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            + + ++I GL K G  D   +LL +M  +    D  T+N +I  +  +    +A  L   
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 1640

Query: 121  MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M   GV P+  T++ I + L K     E++ +L  M++ GV P    Y TL++G C  G 
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700

Query: 181  VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            +  A +L   ME++G   +  + S ++ G     + E A+ +   ML   + PT+ T+ T
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1760

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
            L        ++  A KL   M+  G+  D  AY   I G+C NG    A EL+  +R   
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820

Query: 301  CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
               +I +Y+ L+D +  +  L    +L   L    LI+
Sbjct: 1821 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1858



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 18/280 (6%)

Query: 140  LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL-----------------TGRVN 182
            L K    + A  +L  + Q+G+   + ++  LMD + L                  G ++
Sbjct: 873  LVKARMYDSAKSILRHLCQMGIGSKS-IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 931

Query: 183  RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
             A E F  +  +G K +V++ ++++    K+K  E   SL+ EM  KGI P V T+N L 
Sbjct: 932  YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 991

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
             GL     +++A  L  +M+ +G       Y T ++  CK G    A+EL   +     E
Sbjct: 992  NGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE 1051

Query: 303  LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
             D+ +Y+  ID LC + R   A+ L   + + ++  + VTYN +I+    +GK+  A  +
Sbjct: 1052 ADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 1111

Query: 363  FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
            F +M    ++P+CV +N L+ G     +  + + LL  M+
Sbjct: 1112 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 1151


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL  ++   G   N + Y++L++   R         L E M NG  E  V       
Sbjct: 150 DARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVG------ 203

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT ++D L   G + K + ++ +MK KN+  DV  Y +VI  +C A +   A  +F E 
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC 263

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PN  T+ V+++  CK G+ME A  LL  M   GV  N  ++NT++DG+C  G V
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++  +ME MG + +V++Y+ L  G C+   +  A +L   M+ KG+ P  VTY TL
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383

Query: 242 F-IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
             I   E   VE A +LF EM   G       Y   +DG  K G I EA    + +    
Sbjct: 384 ISIHCKEGDMVE-ARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D+ +Y+ L+ G C +G++ +A +LF  +       +VV Y  +I  L  +G+ ++A 
Sbjct: 443 LVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAF 502

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+ DM   G+ PD   ++ L+
Sbjct: 503 QLYDDMLKAGLTPDDSLYSALV 524



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 200/403 (49%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVIT---YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKP 58
           +AAA+ T+  A G  P  ++    S +++G C++G    A  L +EM         +C  
Sbjct: 114 DAAAILTR--ALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALC-- 169

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
               Y +++D   +     + +ELL  M++  I   V TY  ++     A D ++ + + 
Sbjct: 170 ----YNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVV 225

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + V  +V  ++ +++  C+ G +  AS++ +  +  G+ PN   Y  L++GFC  
Sbjct: 226 DEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKI 285

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A+ L   M+  G  HN   ++ +I+GYC+   ++ AL + + M   GI+  V TY
Sbjct: 286 GQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTY 345

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           NTL  GL  ++++  A  L   M   GV  +   Y T I   CK G +VEA  LFR +  
Sbjct: 346 NTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAG 405

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 + +Y+ ++DG  K G ++ A      + +  L+ DV TY  ++H  C +GK+D 
Sbjct: 406 KGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDV 465

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A  LF +M+ +G  P+ VA+  L+ G  +   + +  +L   M
Sbjct: 466 ALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDM 508



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 166/341 (48%)

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
           + ++DG CK G VD A+ LL +M    +  + + YNS++  +    D    + L   M +
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G++  V T+++++D L   G + +   +++ M    V  + ++Y  +++ +C  G V R
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 184 AKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           A E+F      G + N  +Y +LING+CK  ++E A  L ++M  +G+    + +NT+  
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMID 315

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL 303
           G      V+ A K+   M++ G+  D + Y T   GLC+   + EA  L   +       
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375

Query: 304 DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  +Y+ LI   CK G +  A  LF  +     +  VVTYN+M+      G + +A    
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 364 LDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +ME KG+ PD   + +L+ G   N +    ++L   M  R
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHR 476



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 6/140 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA  LF ++   G  P+V+TY+ +++G  + G    A    +EM     + G+V  PD 
Sbjct: 394 VEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEM----EKKGLV--PDV 447

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y +++ G C  G VD A +L  +MK +   P+VV Y ++I G      S EA +L+ +
Sbjct: 448 YTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDD 507

Query: 121 MMDQGVQPNVVTFSVIMDEL 140
           M+  G+ P+   +S ++  L
Sbjct: 508 MLKAGLTPDDSLYSALVGSL 527


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 207/399 (51%), Gaps = 6/399 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +++A G  P++ITYSTLI+GLC+ G    A+ L+E+M +          P+++I
Sbjct: 440 AFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR------IIPNSLI 493

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +  I+ GLC++G + +A+     +   N++ D++ YN +I G+    ++ EA +L+ ++ 
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P +VTF+ +M   C N K+ +A +LL+ +   G+ PNA  Y TLM+ +C  G + 
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              EL   M++        +Y+++I G CK  +++ +  L  +M + G+ P  V+YNT+ 
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
               +   + +AF+L+D+M  H +   +  Y   I+G C  G + +A  L  +L+  K  
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           L+  +Y+ +I   C  G +  A   F  +        +  Y+ +I  LC    + +A   
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           F  M + GV PD   F  L+    +    +   ELL  M
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 205/399 (51%), Gaps = 6/399 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++ ++K  G   +  T S +++GLCR      A+  F++      EF    +P  V + T
Sbjct: 233 VYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQD--TEGKEF----QPSVVSFNT 286

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+   CK GFVD AK     M    + PD  +YN +I G C A    EA  L  +M + G
Sbjct: 287 IMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHG 346

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++P++VT++++       G +  A  +++ M+  G  PN   Y  L+ G C  G V  A 
Sbjct: 347 LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEAL 406

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +L+  M S G + ++ S ++L+   CK+++++ A  L+ EM + G++P ++TY+TL  GL
Sbjct: 407 KLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGL 466

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +  +V++A  L+++M  + +  ++  +   + GLC+ G I +A   F  L      LDI
Sbjct: 467 CKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDI 526

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +IDG  K G  + A +L+  L    +   +VT+N +++  C + K+ +A  L   
Sbjct: 527 ILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDT 586

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++  G+ P+ V + TLM           ++ELL  M  +
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAK 625



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 197/369 (53%), Gaps = 6/369 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ ++ + G + ++I+ + L+  LC++    VA  LF EM   NG      +PD +
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM-EANG-----LRPDLI 457

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+T+I GLCK+G V +A  L  +M    I P+ + + +++ G C     ++A+  F  +
Sbjct: 458 TYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYL 517

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   +  +++ +++++D   K G   EA +L + + + G+ P    +N+LM GFC+  ++
Sbjct: 518 ITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKL 577

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A+ L  +++  G + N  +Y+ L+N YC+   ++  L L SEM +K I PT +TY  +
Sbjct: 578 SQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVV 637

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ + +L ++M   G+  D  +Y T I   CK   + +A +L+  + +   
Sbjct: 638 IKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNL 697

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E    +Y+ LI+G C  G LK A  L  SL    +  +   Y  +I A CA G +DKA  
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757

Query: 362 LFLDMEAKG 370
            F  M  KG
Sbjct: 758 YFRQMVEKG 766



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 211/401 (52%), Gaps = 6/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A   F   +    +P+V++++T+++  C+ G   VA + F  M+    + G++  PDA 
Sbjct: 264 DAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMML----KHGLL--PDAY 317

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I GLC  G + +A +L   M++  + PD+VTYN + +GF      N A  +  +M
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKM 377

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+VT++V++   C+ G +EEA +L + MI  G + +      L+   C + +V
Sbjct: 378 LIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQV 437

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A +LF  ME+ G + ++ +YS LI+G CK  E++ A+ LY +M S  I P  + +  +
Sbjct: 438 DVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAI 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
            +GL E  ++ +A   FD +    ++ D   Y   IDG  K G   EA++L++ L     
Sbjct: 498 LMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGI 557

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              I +++ L+ G C + +L  A  L  ++    L  + VTY  +++  C +G M    +
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           L  +M+AK + P  + +  ++ G  +  +  +  +LL  MD
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMD 658



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 73/408 (17%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNS-------------------- 100
           V++  +     +   V  A  +L++MKD N    + TYNS                    
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKV 239

Query: 101 ------------VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
                       V+ G C  +   +A   F +   +  QP+VV+F+ IM   CK G ++ 
Sbjct: 240 SGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDV 299

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK----------- 197
           A     +M++ G+ P+A+ YN L+ G C+ G +  A +L   ME+ G +           
Sbjct: 300 AKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAK 359

Query: 198 ------------------------HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                                    N+ +Y++LI G+C+   +E AL LY EM+S G + 
Sbjct: 360 GFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQL 419

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
           ++++   L   L +  QV+ AFKLF EM+ +G+  D   Y T I GLCK G + +A+ L+
Sbjct: 420 SIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY 479

Query: 294 RTL---RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             +   RI+   L    +  ++ GLC+ G++  A   F  L    L  D++ YNIMI   
Sbjct: 480 EKMCSNRIIPNSL---IHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGY 536

Query: 351 CADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
              G   +A  L+  +  KG++P  V FN+LM G   N + S+   LL
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 11/272 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L   +K  G EPN +TY+TL+N  C  G+    L L  EM            P  +
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMK------AKAIGPTHI 632

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLCK+  + ++ +LL  M    + PD V+YN++I+ FC A D  +A +L+ +M
Sbjct: 633 TYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++P  VT++++++  C  G +++A  LL  +    V  N + Y T++   C  G V
Sbjct: 693 LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDV 752

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           ++A   F  M   G + ++  YS +I   CK   +  A   +  MLS G+ P    +  L
Sbjct: 753 DKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVL 812

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                +   +   F+L  EM + G     W Y
Sbjct: 813 LNAFHQCGHLNSEFELLAEMIKSG-----WLY 839


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 203/424 (47%), Gaps = 25/424 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMIN--------------- 47
           A  LF K+   G   + ++Y+ LI G C  G    AL LF EM                 
Sbjct: 183 AHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCD 242

Query: 48  -GNGEFGVV---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
            G GE G+           +P    Y  ++D  C+E   ++A+++L +M D  + P VVT
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
              V+  +C     + A R+F  M  +G +PNV T++ I+   C  GK+ +A  LL+ M 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV P+   YN L+ G C+ G +  A  L   ME  G   + ++Y++LI+  CK  +++
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 218 GALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  +  +GI+P  VT+NT+  GL +  + + A    + M   G A DT+ Y  FI
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 278 DGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI 337
           + LCK     E L     +     +    +Y+ +I+ L       +A  ++  +      
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            DVVTY   + A C +G++D+A ++  +M+      D +A+NTL+ G     +T + V +
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602

Query: 398 LHRM 401
           L  M
Sbjct: 603 LKHM 606



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 188/370 (50%), Gaps = 12/370 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCK 72
           G  P+  T+++LI G CRT    VA +LF +M   G  +       DAV Y  +I+G C+
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ-------DAVSYAALIEGFCE 211

Query: 73  EGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
            G +D+A EL  +M      PD+ T+ ++++G C A    E   +  +M + G +P    
Sbjct: 212 AGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA 267

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++D  C+  K EEA ++L  M   G+ P       +++ +C  GR++ A  +F SM 
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMR 327

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             GC+ NV++Y+ ++ G+C   ++  A++L  +M   G++P VVTYN L  G      + 
Sbjct: 328 FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIG 387

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            AF+L   M+ +G+AAD + Y   ID LCK G + EA  LF  L       +  +++ +I
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCK+G+  +A     ++       D  TY+  I  LC      +      +M  K V 
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVK 507

Query: 373 PDCVAFNTLM 382
           P  V +  ++
Sbjct: 508 PSTVNYTIVI 517



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 10/366 (2%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P   TY+ LI  LCR      A      M+          +PDA  + ++I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGW------RPDAFTFNSLILGYCRTQQL 180

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
           + A +L  +M  +  + D V+Y ++I GFC A   +EA  LF EM     QP++ T + +
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAAL 236

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LC  G+ EE   +L+ M ++G RP    Y  L+D +C   +   A+++   M   G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
              V + +I++N YC+   + GA+ ++  M  KG +P V TYN +  G     +V +A  
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           L D+M+  GV  D   Y   I G C +G+I  A  L R +       D  +Y+ LID LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 317 KSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           K+G++  A  LF  L    +  + VT+N +I+ LC  GK D A     +M + G APD  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 377 AFNTLM 382
            ++  +
Sbjct: 477 TYSPFI 482



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 9/363 (2%)

Query: 22  YSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKE 81
           + +L+    R   T + L LF  M            P    Y  +I  LC+   +  A+ 
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPP-----APTGATYNALIRALCRRADLRHAQR 150

Query: 82  LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELC 141
            L  M      PD  T+NS+I G+C       A  LF +M  +G   + V+++ +++  C
Sbjct: 151 YLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFC 210

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF 201
           + G+++EA +L   M Q    P+ + +  L+ G C  GR      +   M+ +G +    
Sbjct: 211 EAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTR 266

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++ +C+ ++ E A  + +EM   G+ P VVT   +        ++  A ++F+ M
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRL 321
           +  G   + W Y   + G C  G + +A+ L   +R    E D+ +Y+ LI G C  G +
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386

Query: 322 KIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
             A+ L   +    L AD  TYN++I ALC  GK+D+A  LF  +E +G+ P+ V FNT+
Sbjct: 387 GSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 382 MLG 384
           + G
Sbjct: 447 ING 449



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           EA  +  ++   G  P V+T + ++N  CR G    A+ +FE M   G       C+P+ 
Sbjct: 283 EAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG-------CEPNV 335

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  I+ G C  G V KA  LL QM++  + PDVVTYN +IRG C       A RL   
Sbjct: 336 WTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRL 395

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +  T++V++D LCK GK++EA  L + +   G+RPN+  +NT+++G C  G+
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            + A     +M S G   + ++YS  I   CK K  +  L    EML K +KP+ V Y  
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +   LF       A +++ +M   G + D   Y T +   C  G + EA  +   ++  +
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 301 CELDIRSYSCLIDGLCKSGR 320
             +D  +Y+ LIDG    G+
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQ 595



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 6/377 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   +  K+K  G  P    Y+ L++  CR      A  +  EM +     G++  P  V
Sbjct: 248 EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS----GLM--PCVV 301

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
             T +++  C+EG +  A  +   M+ K   P+V TYN++++GFC A    +A  L  +M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+P+VVT+++++   C +G +  A +LL LM   G+  + + YN L+D  C TG+V
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF  +E  G + N  +++ +ING CK  + + A +    M+S G  P   TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +    +      DEM +  V   T  Y   I+ L        A  ++  +    C
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D+ +Y+  +   C  GRL  A  +   + +   I D + YN +I    + G+ D+A  
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVT 601

Query: 362 LFLDMEAKGVAPDCVAF 378
           +   M      P+   F
Sbjct: 602 ILKHMTGVASMPNHFTF 618



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 4/312 (1%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   TYN++IR  C   D   A+R    M+  G +P+  TF+ ++   C+  ++E A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              M   G   +A  Y  L++GFC  GR++ A ELF  M     + ++++++ L+ G C 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCD 242

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               E  L +  +M   G +PT   Y  L        + E A K+ +EM   G+      
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
               ++  C+ G +  A+ +F ++R   CE ++ +Y+ ++ G C +G++  A  L   + 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETS 392
              +  DVVTYN++I   C DG +  A  L   ME  G+A D   +N L+    +  +  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 393 KVVELLHRMDER 404
           +   L   ++ R
Sbjct: 423 EACSLFDGLEYR 434



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/451 (22%), Positives = 193/451 (42%), Gaps = 53/451 (11%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE---------- 51
           +A AL  +++  G EP+V+TY+ LI G C  GH   A  L   ++ GNG           
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR-LMEGNGLAADQYTYNVL 411

Query: 52  FGVVCK--------------------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
              +CK                    P++V + T+I+GLCK G  D A   L  M     
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            PD  TY+  I   C    S E      EM+ + V+P+ V ++++++ L        A++
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
           +   M+  G  P+   Y T +  +C  GR++ A+ +   M+      +  +Y+ LI+G+ 
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI-------------------GLFEIHQVE 252
              + + A+++   M      P   T+   FI                    +++  ++ 
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTF---FILLRHLLQRRLAEHVPLKATSVWKTIELA 648

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
             F+LF+ M+++ V +    Y + ++G  +   + E   L   ++     L+   Y+ L+
Sbjct: 649 DVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALV 708

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +  CK      AW L  S+     + +++ Y  ++  L A+G+ D+A ++F     K   
Sbjct: 709 NCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYN 768

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            D + +  ++ G IR        +++  +++
Sbjct: 769 TDEIVWKVIIDGFIRKGHADMCHDMISMLEQ 799



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 22/316 (6%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
           +P+ + Y+ +IN L    +  +A  ++ +M++        C PD V YTT +   C EG 
Sbjct: 507 KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG------CSPDVVTYTTSVRAYCNEGR 560

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           +D+A+ ++ +MK      D + YN++I G      ++ A  +   M      PN  TF +
Sbjct: 561 LDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFI 620

Query: 136 IM----------------DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++                  + K  ++ +  +L ELM +  V  +A  Y ++++GF    
Sbjct: 621 LLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEER 680

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R++    L   M+      N   Y+ L+N +CK +    A +L   M+  G  P ++ Y 
Sbjct: 681 RLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQ 740

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL    Q +RA ++F   +      D   ++  IDG  + G+     ++   L  +
Sbjct: 741 YLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM 800

Query: 300 KCELDIRSYSCLIDGL 315
           KC+    +Y+ L + L
Sbjct: 801 KCKPSDETYAMLTEEL 816



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A AL   +   G  PN+I Y  L++GL   G    A  +F    +   E+      D +
Sbjct: 719 DAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRS--SRWKEYNT----DEI 772

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           ++  IIDG  ++G  D   +++  ++     P   TY
Sbjct: 773 VWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETY 809


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 2/310 (0%)

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           DV++Y+  I G C      EA  +F EM ++G  P+  T++++++ LCK+ ++E    L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G  P    Y TL+ GFC  GRV+ A ++   ME  G   N  +Y+ LI G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 214 KEIEGALSLYSEMLSKGIK--PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            E+E A+ +  EM  +G +  P VVTY  L  GL +    E   +  DEM   G   +  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   I GLC+ G  +EA  L   +  + CELD+  Y+ LIDGLCK G L  A E+   +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
               +  DV TY  +I  LC  G +D+A  L  +M AKG+ P+ V + TL+ G  + + T
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 392 SKVVELLHRM 401
              ++L++ M
Sbjct: 390 DHALQLVNEM 399



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 173/335 (51%), Gaps = 8/335 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +VI+YS  INGLC+ G    A+ +F EM     E G    PD+  Y  +I+GLCK+  ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREM----EEKGSA--PDSFTYNILINGLCKDAQLE 143

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
               L+ +M+ +  +P VVTY ++I GFC A   + A  +  EM  +G+ PN VT++ ++
Sbjct: 144 MGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI 203

Query: 138 DELCKNGKMEEASQLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
             LC  G++E A  +L+ M   G    PN   Y  L+ G C  G      E    M   G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
           C  N  +Y+ LI+G C+      A  L +EM++ G +  VV YN+L  GL ++ +++ A 
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
           ++   M   GVA D + Y + I GLC  G + EAL L + +R      +  +Y+ LI+G 
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            ++ R   A +L + +    L+     Y I+  +L
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F +++  G  P+  TY+ LINGLC+     + ++L +EM    G       P  V
Sbjct: 109 EAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM-QARG-----FSPTVV 162

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I G C  G VD A ++L +M+ + I P+ VTY ++I+G C   +   A  +  EM
Sbjct: 163 TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM 222

Query: 122 MDQGVQ--PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
             +G +  PNVVT++ ++  LC+ G  E   + L+ MI  G  PN   Y  L+ G C  G
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKG 282

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               A  L   M ++GC+ +V  Y+ LI+G CK  E++ A  +   M+ KG+ P V TY 
Sbjct: 283 SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYT 342

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           +L  GL +   ++ A  L  EM+  G+  ++  Y T I+G  +      AL+L   ++
Sbjct: 343 SLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMK 400



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 156/321 (48%), Gaps = 10/321 (3%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D + Y+  I+GLCK+G + +A E+  +M++K   PD  TYN +I G C          L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +G  P VVT++ ++   C  G+++ A  +L+ M   G+ PN   Y  L+ G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 179 GRVNRAKELFVSMESMG--CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
           G V RA  +   M+  G  C  NV +Y+ LI+G C+    E  +    EM+  G  P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY  L  GL +      A  L +EM   G   D   Y + IDGLCK G     L+  R +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG----ELDFAREM 325

Query: 297 RILKCE----LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
           +IL  E     D+ +Y+ LI GLC +G L  A  L   +    ++ + VTY  +I+    
Sbjct: 326 QILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQ 385

Query: 353 DGKMDKAHDLFLDMEAKGVAP 373
             + D A  L  +M++ G+ P
Sbjct: 386 ADRTDHALQLVNEMKSNGLMP 406



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 148/280 (52%), Gaps = 8/280 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
             +L  +++A G  P V+TY+TLI+G C  G    A+++ +EM       G+   P+ V 
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM----EHRGIT--PNTVT 198

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNIN--PDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           YT +I GLC  G V++A  +L +MK +     P+VVTY  +I G C             E
Sbjct: 199 YTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDE 258

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  PN  T++ ++  LC+ G   EA+ LL  M+ IG   +  +YN+L+DG C  G 
Sbjct: 259 MIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE 318

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           ++ A+E+ + M   G   +VF+Y+ LI G C    ++ AL L  EM +KGI P  VTY T
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTT 378

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L  G  +  + + A +L +EM+ +G+      Y+     L
Sbjct: 379 LINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAV 61
           A  +  +++  G  PN +TY+ LI GLC  G    A+ + +EM + GN      C P+ V
Sbjct: 180 AMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE-----CCPNVV 234

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I GLC++G  +   E L +M      P+  TY ++I G C      EA  L  EM
Sbjct: 235 TYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEM 294

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G + +VV ++ ++D LCK G+++ A ++  LM++ GV P+ F Y +L+ G C  G +
Sbjct: 295 VAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLL 354

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L   M + G   N  +Y+ LING+ +    + AL L +EM S G+ P    Y  L
Sbjct: 355 DEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414

Query: 242 FIGLF 246
           F  L+
Sbjct: 415 FKSLY 419



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 2/239 (0%)

Query: 168 YNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y+  ++G C  G++  A E+F  ME  G   + F+Y+ILING CK+ ++E  +SL  EM 
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 228 SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           ++G  PTVVTY TL  G     +V+ A  + DEM+  G+  +T  Y   I GLC  G + 
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213

Query: 288 EALELFRTLRIL--KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
            A+ + + +++   +C  ++ +Y+ LI GLC+ G  ++  E    +       +  TY  
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +IH LC  G   +A  L  +M A G   D V +N+L+ G  +  E     E+   M E+
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 6/140 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA L  ++ A GCE +V+ Y++LI+GLC+ G     L+   EM     E GV   PD 
Sbjct: 285 LEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE----LDFAREMQILMVEKGVA--PDV 338

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT++I GLC  G +D+A  L+ +M+ K I P+ VTY ++I GF  A+ ++ A +L  E
Sbjct: 339 FTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNE 398

Query: 121 MMDQGVQPNVVTFSVIMDEL 140
           M   G+ P    + ++   L
Sbjct: 399 MKSNGLMPAGDIYKILFKSL 418



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 71/137 (51%)

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWEL 327
            D  +Y   I+GLCK G I EA+E+FR +       D  +Y+ LI+GLCK  +L++   L
Sbjct: 89  TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148

Query: 328 FHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIR 387
              +        VVTY  +IH  C  G++D A D+  +ME +G+ P+ V +  L+ G   
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 388 NNETSKVVELLHRMDER 404
             E  + + +L  M  R
Sbjct: 209 CGEVERAILVLKEMKLR 225



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           + + I  +L +Y   L       V++Y+    GL +  Q+  A ++F EM+  G A D++
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            Y   I+GLCK+  +   + L   ++       + +Y+ LI G C +GR+  A ++   +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG--VAPDCVAFNTLMLGCIRNN 389
               +  + VTY  +I  LC  G++++A  +  +M+ +G    P+ V +  L+ G  +  
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 390 ETSKVVELLHRM 401
                +E L  M
Sbjct: 248 LFEMGMEFLDEM 259



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%)

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           I  +L ++R   +   + D+ SYS  I+GLCK G++  A E+F  +       D  TYNI
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +I+ LC D +++    L  +M+A+G +P  V + TL+ G          +++L  M+ R
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR 190


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           +LF K    G      T S L+NGLC+ G   +A  + + ++N     G+V  P  VIY 
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 375

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T+I+G C+ G ++ A     QMK ++I PD +TYN++I G C A     A+ L +EM D 
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V TF+ ++D   + G++E+   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P++VTYN L  G
Sbjct: 496 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +AL+L + +     +  
Sbjct: 556 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 615

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           +R+Y  LI GL  +GRL     L+  + +  ++     +NIM+ A    G   KA DL  
Sbjct: 616 VRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 675

Query: 365 DMEAK 369
           +M  K
Sbjct: 676 EMLQK 680



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEP-NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           EA  +  ++   G  P N  +Y+ +I G+ R G    A+ +F+EM     E  V+  P+ 
Sbjct: 178 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT----ERAVL--PNH 231

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           + Y T+IDG  K G ++    L  QM    + P+ +TYN ++ G C A    E   L  E
Sbjct: 232 ITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDE 291

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  Q + P+  T+S++ D L +NG  +    L    ++ GV    +  + L++G C  G+
Sbjct: 292 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGK 351

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           V+ A+E+  S+ + G       Y+ LINGYC+  E+EGA S + +M S+ IKP  +TYN 
Sbjct: 352 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 411

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GL +  ++  A  L  EMQ +GV      + T ID   + G + +   +   ++   
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 471

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + ++ SY  +++  CK+G++  A  +   +    ++ +   YN +I A    G  D+A 
Sbjct: 472 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 531

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            L   M++ G++P  V +N L+ G    ++ S+  E+++ +
Sbjct: 532 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 189/382 (49%), Gaps = 8/382 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG-VVCKPDA 60
           E +AL  ++ +    P+  TYS L +GL R G +   L+LF + +      G   C    
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTC---- 339

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
              + +++GLCK+G V  A+E+L  + +  + P  V YN++I G+C   +   A   F +
Sbjct: 340 ---SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 396

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++P+ +T++ +++ LCK  ++  A  LL  M   GV P    +NTL+D +  TG+
Sbjct: 397 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           + +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P    YN 
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +     E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   +
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
              D  SY+ LI   C  G +  A +L   + +  + + V TY+ +I  L   G++ +  
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEME 636

Query: 361 DLFLDMEAKGVAPDCVAFNTLM 382
            L+  M    V P     N ++
Sbjct: 637 YLYQKMMQNNVVPSNAIHNIMV 658



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 5/296 (1%)

Query: 114 AKRLFIEMMDQGVQP--NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
           A RL  ++ D+   P  ++ + +++++ L   G+  +  +   ++   G RP+ F +N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +      G +  A  +   M   G    N FSY+++I G  +      A+ ++ EM  + 
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 231 IKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAL 290
           + P  +TYNT+  G  +   +E  F L D+M  HG+  +   Y   + GLC+ G + E  
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 291 ELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHA 349
            L   +   K   D  +YS L DGL ++G  K    LF  SL  GV I D  T +I+++ 
Sbjct: 287 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY-TCSILLNG 345

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           LC DGK+  A ++   +   G+ P  V +NTL+ G  +  E         +M  R+
Sbjct: 346 LCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  K+K+ G  P+++TY+ LI GLC       A    EE+IN      ++  PDAV
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA----EEIINSLSNHRLI--PDAV 582

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y T+I   C  G +DKA +L  +M    I   V TY+ +I G   A    E + L+ +M
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
           M   V P+    +++++   K G   +A  L + M+Q
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679


>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 225

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/186 (50%), Positives = 131/186 (70%)

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           ++LY+EML  G +P   TY TL  GLF+  +V  A KLF  ++ +G++AD+  YR F+DG
Sbjct: 1   MNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDG 60

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIAD 339
           LCKNG + EA+E F  L+    +LDI SY+CLIDGLCK+G+L+ AWELF  L +  L +D
Sbjct: 61  LCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSD 120

Query: 340 VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           VVTYNIMIH  C  G++DKA+ LF  ME  G  PD + +NTL+ G  ++N++ +VV+LLH
Sbjct: 121 VVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLH 180

Query: 400 RMDERN 405
           +M +R+
Sbjct: 181 KMIQRD 186



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 114/208 (54%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+Q+G RPNA  Y TL+ G   TG+V  AK+LF  +++ G   +   Y I ++G CKN  
Sbjct: 7   MLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGC 66

Query: 216 IEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A+  ++++ S  IK  + +YN L  GL +  ++E A++LF+++ + G+ +D   Y  
Sbjct: 67  LYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNI 126

Query: 276 FIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV 335
            I G CK G + +A  LF  +    C  DI +Y+ L+ G C+S +     +L H + +  
Sbjct: 127 MIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRD 186

Query: 336 LIADVVTYNIMIHALCADGKMDKAHDLF 363
           +  D ++ NI+I  L  D K  +  DL 
Sbjct: 187 MSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 117/222 (52%), Gaps = 6/222 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L+ ++   G  PN  TY TL+ GL +TG    A  LF  +      +G+    D+ IY  
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVL----KTYGI--SADSCIYRI 56

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
            +DGLCK G + +A E   Q+K  NI  D+ +YN +I G C A     A  LF ++  +G
Sbjct: 57  FLDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEG 116

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +Q +VVT+++++   CK G++++A+ L E M + G  P+   YNTL+ GFC + + +   
Sbjct: 117 LQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVV 176

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           +L   M       +  S +I+I+   K+++ +  L L    L
Sbjct: 177 KLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLLPRFL 218



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 110/201 (54%), Gaps = 6/201 (2%)

Query: 39  LNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTY 98
           +NL+ EM+       V  +P+A  Y T++ GL + G V  AK+L   +K   I+ D   Y
Sbjct: 1   MNLYNEMLQ------VGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIY 54

Query: 99  NSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQ 158
              + G C      EA   F ++    ++ ++ +++ ++D LCK GK+E A +L E + Q
Sbjct: 55  RIFLDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQ 114

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++ +   YN ++ GFC  G+V++A  LF  ME  GC  ++ +Y+ L+ G+C++ + + 
Sbjct: 115 EGLQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDE 174

Query: 219 ALSLYSEMLSKGIKPTVVTYN 239
            + L  +M+ + + P  ++ N
Sbjct: 175 VVKLLHKMIQRDMSPDAISCN 195



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 116/217 (53%), Gaps = 3/217 (1%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+ EM+  G +PN  T+  ++  L + GK+ +A +L  ++   G+  ++ +Y   +DG C
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G +  A E F  ++S   K ++ SY+ LI+G CK  ++E A  L+ ++  +G++  VV
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TYN +  G  ++ QV++A  LF++M+ +G   D   Y T + G C++    E ++L   +
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
                  D  S + +ID L K  + +   +L   LPR
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDL---LPR 216



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 105/201 (52%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P+  TY +++ G        +AK+LF  +   G+  +   + + +D LCKNG + EA + 
Sbjct: 14  PNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEH 73

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
              +    ++ +   YN L+DG C  G++  A ELF  +   G + +V +Y+I+I+G+CK
Sbjct: 74  FNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCK 133

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L+ +M   G  P ++TYNTL  G  + ++ +   KL  +M +  ++ D  +
Sbjct: 134 VGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAIS 193

Query: 273 YRTFIDGLCKNGYIVEALELF 293
               ID L K+    E L+L 
Sbjct: 194 CNIVIDMLRKDEKYQECLDLL 214



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 6/172 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF  LK +G   +   Y   ++GLC+ G    A+  F ++ + N       K D  
Sbjct: 34  DAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEHFNQLKSYN------IKLDIE 87

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +IDGLCK G ++ A EL  ++  + +  DVVTYN +I GFC     ++A  LF +M
Sbjct: 88  SYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKM 147

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
            + G  P+++T++ ++   C++ K +E  +LL  MIQ  + P+A   N ++D
Sbjct: 148 EENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVID 199



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 90/152 (59%), Gaps = 6/152 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F +LK++  + ++ +Y+ LI+GLC+ G    A  LFE++      +    + D V
Sbjct: 69  EAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKL------YQEGLQSDVV 122

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I G CK G VDKA  L  +M++    PD++TYN+++ GFC +N S+E  +L  +M
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           + + + P+ ++ ++++D L K+ K +E   LL
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214


>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 183/345 (53%), Gaps = 24/345 (6%)

Query: 27  NGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQM 86
           +G C+ G T  AL L   +       G + +P+ ++Y+TIIDG+CK   V+ A +L  +M
Sbjct: 23  DGSCKVGQTRAALQLLRRV------DGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEM 76

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             K I+PDV+TY+++I GFC     N+   LF +M  + + P+V TF++ +D  CK G++
Sbjct: 77  VAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRV 136

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
           +EA  +L +M++ G++P+   YNTLM+G+CL   +N AK++F +M   G           
Sbjct: 137 KEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVV--------- 187

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                  K I+ A++LY EM  +   P VVTY++L   + +  Q          +   G+
Sbjct: 188 -------KMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILD--GI 238

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
             D + Y  FI GLC++G + +A ++F  L +    LD+ +Y+ +I G C  G  K A  
Sbjct: 239 RPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALA 298

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           L   +     I D   Y I+I +L    + D A  L  +M A+G+
Sbjct: 299 LLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARGL 343



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 18/337 (5%)

Query: 68  DGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ 127
           DG CK G    A +LL ++  K + P+V+ Y+++I G C     N+A  L+ EM+ + + 
Sbjct: 23  DGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRIS 82

Query: 128 PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 187
           P+V+T+S ++   C  GK+ +   L   M    + P+ + +N  +D FC  GRV  AK +
Sbjct: 83  PDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYV 142

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
              M   G K +V +Y+ L+NGYC  KE+  A  +++ M   G+                
Sbjct: 143 LSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGV---------------- 186

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS 307
           +  ++ A  L++EM       D   Y + +D +   G   + +     L  ++   D+ +
Sbjct: 187 VKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILDGIRP--DMYT 244

Query: 308 YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDME 367
           Y+  I GLC+SG+LK A ++F  L       DV TY +MI   C  G   +A  L   ME
Sbjct: 245 YTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKME 304

Query: 368 AKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             G  PD   +  ++L     +E     +LL  M  R
Sbjct: 305 DNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIAR 341



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 27/284 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L++++ A    P+VITYS LI+G C  G     + LF +M   N        PD  
Sbjct: 68  DAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAEN------INPDVY 121

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF--- 118
            +   +D  CKEG V +AK +L  M    I P VVTYN+++ G+C   + N AK +F   
Sbjct: 122 TFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTM 181

Query: 119 -----IEMMDQGVQ-----------PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR 162
                ++M+D+ +            P+VVT+S ++D +   G+  +      ++   G+R
Sbjct: 182 NQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSIL--DGIR 239

Query: 163 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+ + Y   + G C +G++  A+++F  +   G   +V++Y+++I G+C     + AL+L
Sbjct: 240 PDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALAL 299

Query: 223 YSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            S+M   G  P    Y  + + LFE  + + A KL  EM   G+
Sbjct: 300 LSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARGL 343



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 50/93 (53%)

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           DG CK G+ + A +L   +   ++  +V+ Y+ +I  +C    ++ A DL+ +M AK ++
Sbjct: 23  DGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRIS 82

Query: 373 PDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           PD + ++ L+ G     + +  + L ++M   N
Sbjct: 83  PDVITYSALISGFCIVGKLNDTIGLFNKMTAEN 115


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 199/386 (51%), Gaps = 7/386 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T + +I+  C+ G+    +  F +M+    E G+   P+ + +T +I+GLCK+G + +A 
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMV----EMGLA--PNVINFTALINGLCKQGSIKQAF 314

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDE 139
           ELL +M  +   P+V T+ ++I G C    + +A RLF++++   G +PNV T++ +++ 
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK  K+  A  LL  M + G+ PN   Y TL+DG C  G   RA EL   M   G   N
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +++Y+ +I+G CK   ++ A  L +++   G++   VTY  L           R+   F+
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN 494

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M + G   D  +Y T I   C+   + E+  LF     L      ++Y+ +I G C+ G
Sbjct: 495 KMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
              +A +LF  +       D +TY  +I  LC + K+D A +L+  M  KG++P  V   
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           TL     + +++S  + +L R+++R 
Sbjct: 615 TLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 201/405 (49%), Gaps = 14/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G +PNV T++TLI+GLC+ G T  A  LF +++  +G      KP+  
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY-----KPNVH 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+G CKE  +++A+ LL +M+++ + P+  TY ++I G C   +   A  L   M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+ T++ I+D LCK G ++EA +LL  +   G++ +   Y  LM   C     
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NR+   F  M  +G   ++ SY+ LI+ +C+ K+++ +  L+ E +S G+ PT  TY ++
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR---I 298
             G         A KLF  M  HG A D+  Y   I GLCK   + +A  L+  +    +
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             CE+   +   L    CK      A  +   L +   I    T N ++  LC++GK+D 
Sbjct: 607 SPCEV---TRLTLAYEYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDM 660

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A   F  +  K    + V     M  C  +N+   V EL  R+ E
Sbjct: 661 AALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 192/403 (47%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  P+ +++  ++   C  G  + A    E  +N   E G +   D   
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----ERWLNAMVERGFIV--DNAT 261

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            T IID  C++G+V++      +M +  + P+V+ + ++I G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV T + ++D LCK G  E+A +L L+L+   G +PN   Y  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NRA+ L   M+  G   N  +Y+ LI+G+CK      A  L   M  +G  P + TYN +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   ++ A++L +++  HG+ AD   Y   +   C+      +L  F  +  +  
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+ LI   C+  ++K +  LF       LI    TY  MI   C  G    A  
Sbjct: 502 TPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  M   G APD + +  L+ G  + ++      L   M ++
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+N+  EM N     G+V  P       ++D     G V+ A+ + ++M  + ++PD V+
Sbjct: 173 AVNMVVEMQNQ----GLV--PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +  ++   C      EA+R    M+++G   +  T ++I+D  C+ G +         M+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+ PN   +  L++G C  G + +A EL   M   G K NV++++ LI+G CK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 218 GALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  L+ +++ S G KP V TY  +  G  +  ++ RA  L   MQ  G+  +T  Y T 
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDG CK G  V A EL   +       +I +Y+ +IDGLCK G L  A+ L + +    L
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            AD VTY I++   C     +++   F  M   G  PD  ++ TL+
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 146/291 (50%), Gaps = 1/291 (0%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA  + +EM +QG+ P+  T + ++D     G +E A  +   M Q GV P+   +  ++
Sbjct: 172 EAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
              C  GRV  A+    +M   G   +  + +++I+ +C+   +   +  + +M+  G+ 
Sbjct: 232 VACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLA 291

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+ +  L  GL +   +++AF+L +EM R G   + + + T IDGLCK G+  +A  L
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 293 F-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           F + +R    + ++ +Y+ +I+G CK  +L  A  L   +    L+ +  TY  +I   C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             G   +A++L   M  +G +P+   +N ++ G  +     +   LL+++ 
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 48/96 (50%)

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
            C++    ++G+LK A  +   +    L+    T N ++      G ++ A ++F++M  
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +GV+PDCV+F  +++ C       +    L+ M ER
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVER 253


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 195/400 (48%), Gaps = 18/400 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  ++  +GC P+V+ YSTLING    GH   AL+L   M+         CKP+ V
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---------CKPNTV 293

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   + GLC     +   EL+ +M  K  +P+  T++ +I   C  N  + A  +  +M
Sbjct: 294 CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM 353

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+ V +++I++ L + G++++A +LL  M+    +P+A  +N ++ GFC   R 
Sbjct: 354 EKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERW 410

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M    C     +++ILI+  C+N  +  A  ++ +M      P +VTY++L
Sbjct: 411 HDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +    C
Sbjct: 471 LNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDC 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +++ LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M  K   PD +++N+ + G  R        EL+  M
Sbjct: 588 LLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEM 624



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PN  T+S LI+ LC+      A+ + E+M     ++G  C+PD V Y  
Sbjct: 314 LMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM----EKYG--CEPDTVNYNI 367

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           II+ L + G VD A  LL  M  K   PD + +N+V++GFC A   ++A  L  +M    
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDD 424

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
                +TF++++D LC+NG +  A+Q+ E M +    P+   Y++L++GF   G V  A 
Sbjct: 425 CPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 484

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF    SM CK ++FSY+ ++ G C+    E A  L +EM+ K   P  VT+N L   L
Sbjct: 485 QLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 541

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V+RA ++ ++M  +G   D + Y   I+G  + G + +AL+L  T   + C+ D 
Sbjct: 542 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST---MSCKPDA 598

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            SY+  + GLC++ R + A EL   + R     + VT+    H L
Sbjct: 599 ISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 643



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 194/382 (50%), Gaps = 16/382 (4%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ++++TL+ G CR G    A    E ++      G     + V YT +IDG C+ G +D A
Sbjct: 125 VSHNTLVAGYCRDGRLADA----ERVLGAARATGAA---NVVTYTALIDGYCRSGRLDDA 177

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             L+  M    + PD  TYN+V++G C A    EA+ L  EM+     PN VTF+  +  
Sbjct: 178 LRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRS 234

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            C+NG ++ A QLL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N
Sbjct: 235 FCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPN 291

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
              Y+  + G C  +  E    L +EM+ KG  P   T++ L   L + + V+ A ++ +
Sbjct: 292 TVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLE 351

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M+++G   DT  Y   I+ L + G + +AL L  +   + C+ D   ++ ++ G C++ 
Sbjct: 352 QMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNS---MVCKPDALGFNAVLKGFCRAE 408

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R   A EL   + R       +T+NI+I  LC +G ++ A  +F  M      PD V ++
Sbjct: 409 RWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYS 468

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
           +L+ G          ++L   M
Sbjct: 469 SLLNGFSEQGLVEVAIQLFRSM 490



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 130/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L  ++    C    +T++ LI+ LC+ G    A  +FE+M          C PD V
Sbjct: 412 DASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPR------YRCTPDIV 465

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++++G  ++G V+ A +L   M  K   PD+ +YN+V++G C A    +A  L  EM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN VTF+++++ LC+ G ++ A ++LE M   G  P+ F YN L++GF   GR+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P  VT+
Sbjct: 583 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 142/273 (52%), Gaps = 8/273 (2%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           ++ ++++ +LC  G++ +A ++L+ +       +A  +NTL+ G+C  GR+  A+ +  +
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
             + G   NV +Y+ LI+GYC++  ++ AL L + M    + P   TYNT+  GL    +
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            E A +L  EM R+    +   + T I   C+NG +  A++L   +    C  D+  YS 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+G  + G +  A +L +++   +   + V YN  +  LC   + +   +L  +M  KG
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +P+   F+ L+    +NN     VE+L +M++
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L   L+ FG  PNV+ Y+TLI+G C+ G  ++A NLF +M       G+V  P+   Y+ 
Sbjct: 180 LLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM----DRLGLV--PNQHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           +++G  K+G   +  ++   M    I P+   YN +I  +C     ++A ++F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +   V+T+++++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC  G+++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I  + VTY  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
             ++  ++A ++   M++ G+  D + Y   I G C NG + EA + F++L  +  + + 
Sbjct: 414 ARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNS 473

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
             Y+ +I G CK G    A  L + +    ++ +V ++   +  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQ 533

Query: 366 MEAKGVAPD 374
           M   G+ P 
Sbjct: 534 MINSGLKPS 542



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 7/381 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N  ++  +I G C  G+ +    L   +     EFG+   P+ VIYTT+IDG CK G V 
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVL----EEFGL--SPNVVIYTTLIDGCCKNGDVM 210

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            AK L  +M    + P+  TY+ ++ GF       E  +++  M   G+ PN   ++ ++
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
            E C +G +++A ++   M + G+      YN L+ G C   +   A +L   +  +G  
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ILING+C   +++ A+ L++++ S G+ PT+VTYNTL  G  ++  +  A  L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+   +A     Y   ID   +  Y  +A E+   +       D+ +YS LI G C 
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +G +K A + F SL    L  + V YN MIH  C +G   +A  L  +M   G+ P+  +
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510

Query: 378 FNTLMLGCIRNNETSKVVELL 398
           F + M G +  +E  K  ELL
Sbjct: 511 FCSTM-GLLCRDEKWKEAELL 530



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 180/343 (52%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           +A  +  +I G C+ G+  +   LL  +++  ++P+VV Y ++I G C   D   AK LF
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLF 216

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G+ PN  T+SV+M+   K G   E  Q+ E M + G+ PNA+ YN L+  +C  
Sbjct: 217 CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCND 276

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G V++A ++F  M   G    V +Y+ILI G C+ K+   A+ L  ++   G+ P +VTY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L  G  ++ +++ A +LF++++  G++     Y T I G  K   +  AL+L + +  
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y+ LID   +      A E+   + +  L+ DV TY+++IH  C +G M +
Sbjct: 397 RCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKE 456

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           A   F  +    + P+ V +NT++ G  +   + + + LL+ M
Sbjct: 457 ASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 17/355 (4%)

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVT----------------YNSVIRGFCYAN 109
           I++ L   G + +A+ L+L++    I   ++                 Y++++  + +++
Sbjct: 44  ILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSH 103

Query: 110 DSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYN 169
            +++A      M+ +G  P   TF+ ++  L ++   ++A  +  ++ +  V  NA+ + 
Sbjct: 104 STDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL-KSKVVLNAYSFG 162

Query: 170 TLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            ++ G C  G   R   L   +E  G   NV  Y+ LI+G CKN ++  A +L+ +M   
Sbjct: 163 IMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRL 222

Query: 230 GIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ P   TY+ L  G F+       F++++ M R G+  + +AY   I   C +G + +A
Sbjct: 223 GLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKA 282

Query: 290 LELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
            ++F  +R       + +Y+ LI GLC+  +   A +L H + +  L  ++VTYNI+I+ 
Sbjct: 283 FKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING 342

Query: 350 LCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            C  GKMD A  LF  +++ G++P  V +NTL+ G  +    +  ++L+  M+ER
Sbjct: 343 FCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 184/410 (44%), Gaps = 12/410 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV---------- 55
           LF      G      + S ++N L  +G    A +L   +I+G     ++          
Sbjct: 25  LFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTS 84

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
           C     +Y  I++        D+A   L  M  +   P   T+N+++     +N  ++A 
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
            +F  ++   V  N  +F +++   C+ G      +LL ++ + G+ PN  +Y TL+DG 
Sbjct: 145 WIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC 203

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
           C  G V  AK LF  M+ +G   N  +YS+L+NG+ K         +Y  M   GI P  
Sbjct: 204 CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA 263

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
             YN L         V++AFK+F EM+  G+A     Y   I GLC+     EA++L   
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +    +I +Y+ LI+G C  G++  A  LF+ L    L   +VTYN +I        
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 356 MDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +  A DL  +ME + +A   V +  L+    R N T K  E +H + E++
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACE-MHSLMEKS 432



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 165/353 (46%), Gaps = 7/353 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           M A  LF K+   G  PN  TYS L+NG  + G       ++E M       G+V  P+A
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENM----NRSGIV--PNA 263

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I   C +G VDKA ++  +M++K I   V+TYN +I G C      EA +L  +
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ PN+VT++++++  C  GKM+ A +L   +   G+ P    YNTL+ G+     
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +L   ME      +  +Y+ILI+ + +    + A  ++S M   G+ P V TY+ 
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSV 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G      ++ A K F  +    +  ++  Y T I G CK G    AL L   +    
Sbjct: 444 LIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
              ++ S+   +  LC+  + K A  L   +    L   V  Y  M+H +  D
Sbjct: 504 MVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK-MVHKVKGD 555


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 186/333 (55%), Gaps = 2/333 (0%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++  +++  CKEG +  A+++  ++  +++ P VV++N++I G+C   + +   RL   M
Sbjct: 242 VFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHM 301

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V T+S +++ LCK  KM+ A +L   M + G+ PN  ++ TL+ G    G++
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQI 361

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           +  KE +  M S G + ++  Y+ L+NG+CKN ++  A ++   M+ +G++P  VTY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G      V+ A ++  EM ++G+  D   +   I G+CK G +++A    R +     
Sbjct: 422 IDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGM 481

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           + D  +Y+ ++D  CK G  +  ++L   +     I +VVTYN++++ LC  G+M  A D
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNA-D 540

Query: 362 LFLD-MEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           + LD M   GV PD + +NTL+ G  R+   SK
Sbjct: 541 MLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 175/349 (50%), Gaps = 9/349 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +F ++      P V++++TLING C+ G+  V   L   M           +PD  
Sbjct: 258 DAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR------TRPDVF 311

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+ +I+ LCKE  +D A  L  +M ++ + P+ V + ++I G       +  K  + +M
Sbjct: 312 TYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKM 371

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP++V ++ +++  CKNG +  A  +++ MI+ G+RP+   Y TL+DGFC  G V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDV 431

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A E+   M+  G + +   +S LI G CK   +  A     EML  G+KP  VTY  +
Sbjct: 432 DTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMM 491

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                +    +  FKL  EMQ  G   +   Y   ++GLCK G +  A  L   +  +  
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGV 551

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
             D  +Y+ L++G     R   A + +   P   ++AD+ +Y  +++ L
Sbjct: 552 VPDDITYNTLLEG---HHRHANASKHYKQKPEIGIVADLASYKSLVNEL 597



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 177/336 (52%), Gaps = 6/336 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   NV  ++ L+N  C+ G+   A  +F+E+   +       +P  V + T+I+G CK 
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS------LRPTVVSFNTLINGYCKV 288

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +D    L   M+     PDV TY+++I   C  N  + A RLF EM ++G+ PN V F
Sbjct: 289 GNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIF 348

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++    +NG+++   +  + M+  G++P+  +YNTL++GFC  G +  A+ +   M  
Sbjct: 349 TTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G + +  +Y+ LI+G+C+  +++ AL +  EM   GI+   V ++ L  G+ +  +V  
Sbjct: 409 RGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVID 468

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A +   EM R G+  D   Y   +D  CK G      +L + ++      ++ +Y+ L++
Sbjct: 469 AERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLN 528

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHA 349
           GLCK G++K A  L  ++    ++ D +TYN ++  
Sbjct: 529 GLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 157/301 (52%)

Query: 84  LQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKN 143
           +++ D     +V  +N ++  FC   +  +A+++F E+  + ++P VV+F+ +++  CK 
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKV 288

Query: 144 GKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSY 203
           G ++   +L   M +   RP+ F Y+ L++  C   +++ A  LF  M   G   N   +
Sbjct: 289 GNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIF 348

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+G+ +N +I+     Y +MLSKG++P +V YNTL  G  +   +  A  + D M R
Sbjct: 349 TTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G+  D   Y T IDG C+ G +  ALE+ + +     ELD   +S LI G+CK GR+  
Sbjct: 409 RGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVID 468

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A      + R  +  D VTY +M+ A C  G       L  +M++ G  P+ V +N L+ 
Sbjct: 469 AERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLN 528

Query: 384 G 384
           G
Sbjct: 529 G 529



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 146/285 (51%)

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
            ++E++D G   NV  F+++M++ CK G + +A ++ + + +  +RP    +NTL++G+C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G ++    L   ME    + +VF+YS LIN  CK  +++GA  L+ EM  +G+ P  V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
            + TL  G     Q++   + + +M   G+  D   Y T ++G CKNG +V A  +   +
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D  +Y+ LIDG C+ G +  A E+   + +  +  D V ++ +I  +C +G++
Sbjct: 407 IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRV 466

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             A     +M   G+ PD V +  +M    +  +     +LL  M
Sbjct: 467 IDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 8/213 (3%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
           G   NV+ ++IL+N +CK   I  A  ++ E+  + ++PTVV++NTL  G  ++  ++  
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRS----YSC 310
           F+L   M++     D + Y   I+ LCK   +  A  LF  +    CE  +      ++ 
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEM----CERGLIPNDVIFTT 350

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI G  ++G++ +  E +  +    L  D+V YN +++  C +G +  A ++   M  +G
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           + PD V + TL+ G  R  +    +E+   MD+
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQ 443



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 12/142 (8%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           AL   L+A G +P+ +TY+ +++  C+ G       L +EM   +G       P+ V Y 
Sbjct: 472 ALREMLRA-GMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHI-----PNVVTYN 524

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFC-YANDSNEAKRLFIEMMD 123
            +++GLCK G +  A  LL  M +  + PD +TYN+++ G   +AN S   K    +  +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYK----QKPE 580

Query: 124 QGVQPNVVTFSVIMDELCKNGK 145
            G+  ++ ++  +++EL +  K
Sbjct: 581 IGIVADLASYKSLVNELYRASK 602



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 54/120 (45%)

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G+I + ++ FR  R     + IR    L+D + K       W  +  +       +V  +
Sbjct: 184 GFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVF 243

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           NI+++  C +G +  A  +F ++  + + P  V+FNTL+ G  +         L H M++
Sbjct: 244 NILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEK 303


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 207/430 (48%), Gaps = 52/430 (12%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EAA     +   GCEP++ TY+TLING C  G    A  L E  I   G F     P+ 
Sbjct: 324 IEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIR-RGLF-----PNK 377

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YT +I    K G   +A ELL++M ++    D++ Y +++ G   A + + A  +  +
Sbjct: 378 FSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDK 437

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM++G+ P+   ++V+M  LCK G+   A QLL  M+   V P+AFV  TL+DGF   G 
Sbjct: 438 MMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGN 497

Query: 181 VNRAKELFVSMESMG---------------CKHNV--------------------FSYSI 205
           ++ AK+LF      G               CK+ +                    F+YS 
Sbjct: 498 LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYST 557

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+GY K  ++ GAL ++  ML K  KP VVT+ +L  G      + RA K+F+EM+  G
Sbjct: 558 IIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG 617

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y   I   CK G + +A   F  + I KC  +  +++ L++GL  +  + I+ 
Sbjct: 618 FEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISS 677

Query: 326 ELFHSLPR------GVLIAD-----VVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           +  +S P       G++I+D     +  YN ++  LC    +  A  L   M +KG  PD
Sbjct: 678 KRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPD 737

Query: 375 CVAFNTLMLG 384
            V+F  L+ G
Sbjct: 738 PVSFIALLHG 747



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 200/431 (46%), Gaps = 32/431 (7%)

Query: 2   EAAALF-TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE--------- 51
           EA  L+ T +    C P+V   ++L+N L   G   +A  +++EM++ NG+         
Sbjct: 149 EALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIV 208

Query: 52  --------------------FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                               +G  C P+ V Y T+IDG CK G +++A  L  ++K K  
Sbjct: 209 TKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGF 268

Query: 92  NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
            P V TY ++I  FC         +L +EM ++G+  ++  F+ I+D   K+G   EA+ 
Sbjct: 269 LPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAAD 328

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            +  MI+ G  P+   YNTL++G C  G+V  A+EL       G   N FSY+ LI+ + 
Sbjct: 329 AVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFS 388

Query: 212 KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN E   A  L  EM  +G    ++ Y  L  GL    +V+ A  + D+M   G+  D  
Sbjct: 389 KNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDAN 448

Query: 272 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH-S 330
            Y   + GLCK G    A +L   +       D    + L+DG  + G L  A +LF  +
Sbjct: 449 IYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLT 508

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNE 390
           + RG+  + VV  N MI   C  G M+ A   F  M     +PD   ++T++ G ++ N+
Sbjct: 509 IERGIDTS-VVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 391 TSKVVELLHRM 401
               + +   M
Sbjct: 568 LRGALRMFGLM 578



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 194/416 (46%), Gaps = 29/416 (6%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGH---------------TIVALNLFEEMIN 47
           A  LF +LK  G  P V TY  +IN  C+ G                  V+L +F  +I+
Sbjct: 256 ANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIID 315

Query: 48  GNGEFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
              + G                C+PD   Y T+I+G C +G V +A+ELL     + + P
Sbjct: 316 ARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFP 375

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
           +  +Y  +I  F    +   A  L IEM ++G   +++ +  ++  L   G+++ A  + 
Sbjct: 376 NKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVR 435

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M++ G+ P+A +YN LM G C  GR   AK+L V M       + F  + L++G+ ++
Sbjct: 436 DKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRH 495

Query: 214 KEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ A  L+   + +GI  +VV  N +  G  +   +  A   F  M     + D + Y
Sbjct: 496 GNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTY 555

Query: 274 RTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
            T IDG  K   +  AL +F  +    C+ ++ +++ LI+G C++G L  A ++F  +  
Sbjct: 556 STIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRS 615

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
                +VVTY I+I   C +GK+ KA   F  M      P+   FN L+ G   NN
Sbjct: 616 FGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNN 671



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 7/404 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   L   +K+    P     S +I+    +G    AL L+  +I+ +      C PD  
Sbjct: 114 EIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHN-----CVPDVF 168

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
              ++++ L   G V+ A+++  +M D+N + D  T   V +G C      E + L  + 
Sbjct: 169 ACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKR 228

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+V ++ ++D  CKNG +E A+ L + +   G  P    Y  +++ FC  G+ 
Sbjct: 229 WGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKF 288

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPTVVTYNT 240
               +L V M+  G   ++  ++ +I+   K+  EIE A ++   M+  G +P + TYNT
Sbjct: 289 EAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV-RWMIESGCEPDMATYNT 347

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  G     +V  A +L +   R G+  + ++Y   I    KNG  V A EL   +    
Sbjct: 348 LINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERG 407

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
             LD+ +Y  L+ GL  +G + +A  +   +    ++ D   YN+++  LC  G+   A 
Sbjct: 408 HTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAK 467

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            L ++M  + V PD     TL+ G IR+    +  +L     ER
Sbjct: 468 QLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIER 511



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 181/369 (49%), Gaps = 54/369 (14%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A+ L  ++   G   ++I Y  L++GL   G   VAL + ++M+    E G++  PDA
Sbjct: 394 VRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM----ERGIL--PDA 447

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            IY  ++ GLCK+G    AK+LL++M D+N+ PD     +++ GF    + +EAK+LF  
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +++G+  +VV  + ++   CK G M +A    + M      P+ F Y+T++DG+     
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +F  M    CK NV +++ LING+C+N ++  A  ++ EM S G +P VVTY T
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTY-T 626

Query: 241 LFIGLF-EIHQVERAFKLFDEM--------------------QRHGVA------------ 267
           + IG F +  ++ +A   F++M                      +G+A            
Sbjct: 627 ILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNL 686

Query: 268 ---------ADTW-----AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
                    +D W     AY + +  LC++  +  AL+L   +       D  S+  L+ 
Sbjct: 687 TLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLH 746

Query: 314 GLCKSGRLK 322
           GLC  GRL+
Sbjct: 747 GLCLEGRLQ 755



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 3/348 (0%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D  + ++++  L +     + + LL  MK K + P     + VI  +  +    EA  L+
Sbjct: 95  DGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELY 154

Query: 119 IEMMD-QGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
             ++D     P+V   + +++ L  +GK+E A ++ + M+      + +    +  G C 
Sbjct: 155 NTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCK 214

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V   + L       GC  N+  Y+ LI+GYCKN +IE A  L+ E+  KG  PTV T
Sbjct: 215 EGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKT 274

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  +     +  + E   KL  EM+  G+A     +   ID   K+G  +EA +  R + 
Sbjct: 275 YGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMI 334

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKM 356
              CE D+ +Y+ LI+G C  G+++ A EL  H++ RG L  +  +Y  +IHA   +G+ 
Sbjct: 335 ESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG-LFPNKFSYTPLIHAFSKNGEY 393

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            +A +L ++M  +G   D +A+  L+ G +   E    + +  +M ER
Sbjct: 394 VRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMER 441



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 68/239 (28%)

Query: 10  LKAFG------CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           L+ FG      C+PNV+T+++LING CR G    A  +FEEM +    FG   +P+ V Y
Sbjct: 572 LRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRS----FGF--EPNVVTY 625

Query: 64  TTIIDGLCKEGFVDKAKELLLQM-----------------------------KDKNINPD 94
           T +I   CKEG + KA     QM                             K  N  P+
Sbjct: 626 TILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPN 685

Query: 95  -----------------VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
                            +  YNS++   C       A +L  +MM +G  P+ V+F  ++
Sbjct: 686 LTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALL 745

Query: 138 DELCKNGKMEEASQLL-----ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
             LC  G++++ + ++     E  +QI V+     Y+  +D F   G  + A  L  ++
Sbjct: 746 HGLCLEGRLQDWNNVIPCNFNERQLQIAVK-----YSEKLDQFLSEGLTSDASLLLQTL 799


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 198/393 (50%), Gaps = 9/393 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G EPN++ Y+ LI+G C  G    AL +FE M +GN      C P+   YT +I GLCK 
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKS 260

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G V++A  L  +M +  + P+VVTY ++I+G C       A RL   M   G+ PN  TF
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           SV++D LCK  K+EEA   L  +++ GV+ N  VY +L+DG C TG+++ A EL   M S
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   +  SYS LI+G C+ K++  A  +  +M+ KGI+ + VTY  +   L      E 
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG 440

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
             K+FD+M   G+  D   Y  F+   C+ G + +A  +   +       ++ +Y+ LI 
Sbjct: 441 PKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           G    G +  A+  F  +       +  +Y +++  +      D + D++   + K +  
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQE 560

Query: 374 ---DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              D + +  L+ G ++    ++   LL  M E
Sbjct: 561 SNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE 593



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 196/383 (51%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  +F  +   GC     TY+ L++GL   G    A+ +F  M   +      C PD  
Sbjct: 125 HACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADS------CAPDTH 178

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y T++ GLC+ G  ++A+ LL +       P++V YN++I G+C A +   A ++F  M
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNV T++ ++  LCK+GK+E A  L   M++ G+ PN   Y  L+ G C  G +
Sbjct: 239 DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHL 298

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  L   ME+ G   N +++S+LI+  CK +++E A      ++ KG+K   V Y +L
Sbjct: 299 QCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +++ A +L  +M   G   D  +Y + IDGLC+   + +A  +   +     
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +    +Y+ +ID L +    +   ++F  +    +  D+VTY + + + C +G+M+ A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           + + M  +GV P+ V +NTL+ G
Sbjct: 479 MIVQMVDRGVFPNLVTYNTLIRG 501



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           N+ TY+TLIN  C  G    A      +++          PD+  YT+ + G C+ G + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDSYAYTSFVLGYCRAGMLT 124

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A  + + M  +       TY +++ G   A    EA  +F+ M      P+   ++ ++
Sbjct: 125 HACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMV 184

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
             LC+ G+ EEA  LLE  +  G  PN  VYN L+DG+C  G +  A ++F  M+   C 
Sbjct: 185 HGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCS 244

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI+G CK+ ++E A+ L+S M+  G++P VVTY  L  G      ++ AF+L
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
              M+ +G+  + W +   ID LCK   + EA     +L     +++   Y+ LIDGLCK
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
           +G++  A EL   +     + D  +Y+ +I  LC   K+ +A  +  DM  KG+    V 
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 378 FNTLMLGCIR 387
           +  ++   +R
Sbjct: 425 YTIIIDELVR 434



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 165/343 (48%), Gaps = 2/343 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           YTT+I+  C  G +  AK+ L  +    + PD   Y S + G+C A     A R+F+ M 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G      T++ ++  L   G + EA  +   M      P+  VY T++ G C  GR  
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A+ L     S G + N+  Y+ LI+GYC   E+E AL ++  M      P V TY  L 
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +  +VERA  LF  M   G+  +   Y   I G C  G++  A  L   +      
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSL-PRGVLIADVVTYNIMIHALCADGKMDKAHD 361
            +  ++S LID LCK  +++ A     SL  +GV + +VV Y  +I  LC  GK+D A +
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV-YTSLIDGLCKTGKIDAADE 373

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           L   M ++G  PD  ++++L+ G  R  + S+   +L  M E+
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 161/337 (47%), Gaps = 4/337 (1%)

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
           T++  L +       + L  +M  +N+     TY ++I  +C A D   AK+    ++  
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLHA 101

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ P+   ++  +   C+ G +  A ++  LM   G    AF Y  L+ G    G V  A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
             +FV M +  C  +   Y+ +++G C+    E A  L  E +S G +P +V YN L  G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
                ++E A K+F+ M  +  + +   Y   I GLCK+G +  A+ LF  +     E +
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 305 IRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFL 364
           + +Y+ LI G C  G L+ A+ L H +    L+ +  T++++I ALC   K+++A     
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 365 DMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            +  KGV  + V + +L+ G  +  +     EL+ +M
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 111/239 (46%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   Y TL++ +CL G +  AK+   S+   G   + ++Y+  + GYC+   +  A  ++
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M  +G   T  TY  L  GL     V  A  +F  M+    A DT  Y T + GLC+ 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G   EA  L         E +I  Y+ LIDG C +G ++ A ++F  +       +V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             +IH LC  GK+++A  LF  M   G+ P+ V +  L+ G            LLH M+
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 3/221 (1%)

Query: 186 ELFVSMESMGCK---HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            +F  MES+  +    N+ +Y+ LIN YC   +I  A    + +L  G+ P    Y +  
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
           +G      +  A ++F  M   G     + Y   + GL   G + EA+ +F  +R   C 
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D   Y+ ++ GLC++GR + A  L           ++V YN +I   C  G+M+ A  +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           F  M+    +P+   +  L+ G  ++ +  + + L  RM E
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 199/374 (53%), Gaps = 9/374 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P++ T++ +I+G C+TG    A ++ + +      +GV   P    Y T+IDG CK G 
Sbjct: 185 SPDLFTFNIVISGFCKTGQLRKAGDVAKNI----SAWGVA--PSVATYNTLIDGYCKRGQ 238

Query: 76  VDK---AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
           V K      LL +M    I+PDVVT+N +I G+C   +   A ++F EM  QG+  NVVT
Sbjct: 239 VGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVT 298

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LC+ GK+E++ +L+E M ++G+       N++++GFC  G +  A+     + 
Sbjct: 299 YNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIA 358

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G K NV +Y+ L++GY +  +++ A +    M  KGI P V TYN L  G        
Sbjct: 359 QRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWR 418

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
               L DEM+  GV AD   Y   I  LC  G + +A++L   +  +  E    +Y+ +I
Sbjct: 419 SVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTII 478

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +G C+ G  + A E+   + +    A+VVTYN+ +   C  GKMD+A+ +  +M  KG+ 
Sbjct: 479 NGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLV 538

Query: 373 PDCVAFNTLMLGCI 386
           P+ + +  +  G I
Sbjct: 539 PNRITYEIINSGMI 552



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 9/356 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN---LFEEMINGNGEFGVVCKP 58
           +A  +   + A+G  P+V TY+TLI+G C+ G      +   L +EMI           P
Sbjct: 206 KAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAG------ISP 259

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D V +  +I+G CKE  +  A ++  +M+ + I  +VVTYNS++ G C      ++ +L 
Sbjct: 260 DVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLV 319

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM + G+   + T + +++  CK G M EA   ++ + Q G++PN   YNTL+DG+   
Sbjct: 320 EEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRL 379

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++  A     +M   G   NV +Y+ LI G+  +++      L  EM  KG+K  VVTY
Sbjct: 380 GKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTY 439

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
           N L   L    +V +A KL DEM   G+     AY T I+G C+ G    A E+   +  
Sbjct: 440 NVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEK 499

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            K   ++ +Y+  +   CK G++  A  + + +    L+ + +TY I+   +   G
Sbjct: 500 RKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 555



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 38/350 (10%)

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           P   + N+++     A+  + A R F   + + V P++ TF++++   CK G++ +A  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNR---AKELFVSMESMGCKHNVFSYSILING 209
            + +   GV P+   YNTL+DG+C  G+V +      L   M   G   +V ++++LING
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCK   I  A+ ++ EM  +GI   VVTYN+L  GL    +VE + KL +EM+  G+A  
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330

Query: 270 TWAYRTFIDGLCKNGYIVEA----------------------LELFRTLRILK------- 300
                + ++G CK G +VEA                      ++ +R L  +K       
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKD 390

Query: 301 ------CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
                    ++++Y+CLI G   S   +    L   +    + ADVVTYN++I ALC  G
Sbjct: 391 AMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG 450

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           ++ KA  L  +M   G+ P  VA+NT++ G     +     E+  RM++R
Sbjct: 451 EVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKR 500



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 6/286 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F +++  G   NV+TY++L++GLCR G    ++ L EEM     E G+ C    + 
Sbjct: 280 AIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEM----EELGLACILSTM- 334

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
             ++++G CK+G + +A+  +  +  + + P+V+TYN+++ G+       EA      M 
Sbjct: 335 -NSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMA 393

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNV T++ ++     +      S LL+ M + GV+ +   YN L+   C  G V 
Sbjct: 394 GKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVR 453

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A +L   M  +G +    +Y+ +ING+C+  + +GA  +   M  +  +  VVTYN   
Sbjct: 454 KAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFL 513

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
               ++ +++ A  + +EM   G+  +   Y     G+ + GY+ +
Sbjct: 514 KYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPD 559



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 4   AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIY 63
           + L  ++K  G + +V+TY+ LI  LC  G    A+ L +EM+    E G+  +P  V Y
Sbjct: 421 SGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMV----EVGL--EPKHVAY 474

Query: 64  TTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD 123
            TII+G C++G    A E+ L+M+ +    +VVTYN  ++ FC     +EA  +  EM++
Sbjct: 475 NTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLE 534

Query: 124 QGVQPNVVTFSVIMDELCKNGKMEEAS 150
           +G+ PN +T+ +I   + + G + + S
Sbjct: 535 KGLVPNRITYEIINSGMIEKGYVPDIS 561


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 207/412 (50%), Gaps = 21/412 (5%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ A GC PN  TY+ LI+GLC+ G  + AL LF+EMI+     G+   P+   
Sbjct: 195 ALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISR----GIT--PNVKT 248

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           +T ++  +C  G + +A+ LL  M+DK   PD VTYN+ + G C A   +EA      + 
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 308

Query: 123 DQGV-QPNVVTFSVIMDELCKNGKMEEASQ-LLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             G     +  +S ++D L   G+ EE  Q  +E++ Q  V P+  +Y  ++ G    GR
Sbjct: 309 HTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGR 368

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            N A   F  M+  G   + F Y+ L+   C   +++GA SL SEM+   +   + TY T
Sbjct: 369 TNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTT 428

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI-- 298
           + IGL +   V+ A ++FD M   G       Y   IDGL +   + EA  LF  + +  
Sbjct: 429 MIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN 488

Query: 299 -----LKCEL------DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
                L+  L      D  +   L++ +C+SG++  A++L   +    ++ DVVTYN ++
Sbjct: 489 NPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLL 548

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           + LC    +D A  LF +++ KG   D + + TL+   +R +  +  + L  
Sbjct: 549 NGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQ 600



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 203/412 (49%), Gaps = 21/412 (5%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A  LF ++ + G  PNV T++ L++ +C  G    A NL   M +        C PD 
Sbjct: 228 VDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKG------CPPDE 281

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDK-NINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
           V Y   + GLCK G VD+A E L  ++        +  Y+ +I G   A    E  + ++
Sbjct: 282 VTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYM 341

Query: 120 EMMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           E+++Q  V P++V +++++    + G+  +A    + M + G  P+ F YNTL+   C  
Sbjct: 342 EVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDA 401

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G ++ A+ L   M       ++ +Y+ +I G CK + ++ A+ ++  M+  G  P+V+TY
Sbjct: 402 GDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTY 461

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQ---------RHGVAA----DTWAYRTFIDGLCKNGY 285
           N L  GL+  H++E A  LF +M+         R  + A    D+   +  ++ +C++G 
Sbjct: 462 NVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQ 521

Query: 286 IVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNI 345
           +++A +L R +       D+ +Y+ L++GLCK   L  A  LF  L       D +TY  
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581

Query: 346 MIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           +I +L    + + A  LF D+   G  P    +N++M    R  + S+ + L
Sbjct: 582 LIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINL 633



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 190/431 (44%), Gaps = 58/431 (13%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +A G +P    +  LI      G    A+  F  M    GEFG  C+P   +Y  ++  L
Sbjct: 131 QAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRM---EGEFG--CRPTTFVYNAVLRVL 185

Query: 71  CKEG-FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
              G  V  A  L  +M      P+  TYN +I G C      +A +LF EM+ +G+ PN
Sbjct: 186 VASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPN 245

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE--- 186
           V T ++++  +C  G+++EA  LL  M   G  P+   YN  + G C  GRV+ A E   
Sbjct: 246 VKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLE 305

Query: 187 ---------------------LFVS-------------MESMGCKHNVFSYSILINGYCK 212
                                LF++             +E      ++  Y+I+I G  +
Sbjct: 306 ALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAE 365

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                 A + + EM  KG  P    YNTL   L +   ++ A  L  EM R+ V  D   
Sbjct: 366 AGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHT 425

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           Y T I GLCK   + EA+++F  +  + C   + +Y+ LIDGL ++ RL+ A  LF+ + 
Sbjct: 426 YTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKME 485

Query: 333 RG-------------VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            G               + D  T   ++ ++C  G++ KA+ L   +   GV PD V +N
Sbjct: 486 VGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYN 545

Query: 380 TLMLGC--IRN 388
           TL+ G   +RN
Sbjct: 546 TLLNGLCKVRN 556



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 175/378 (46%), Gaps = 47/378 (12%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
           EA  L   ++  GC P+ +TY+  ++GLC+ G    A+   E +                
Sbjct: 264 EAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCL 323

Query: 46  -----INGNGEFGVVC----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                + G  E G  C           PD V+YT +I G  + G  + A     +MK+K 
Sbjct: 324 IDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKG 383

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             PD   YN++++  C A D + A+ L  EM+   V  ++ T++ ++  LCK   ++EA 
Sbjct: 384 FTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAM 443

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF--------- 201
           Q+ + M+++G  P+   YN L+DG     R+  A+ LF  ME +G   ++F         
Sbjct: 444 QVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKME-VGNNPSLFLRLTLGANQ 502

Query: 202 -----SYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFK 256
                +   L+   C++ ++  A  L   ++  G+ P VVTYNTL  GL ++  ++ A +
Sbjct: 503 VRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALR 562

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLC 316
           LF E+Q  G   D   Y T ID L +     +AL LF+ +        +  Y+ ++  LC
Sbjct: 563 LFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLC 622

Query: 317 KSGRLKIAWEL-FHSLPR 333
           +  +L  A  L F  LPR
Sbjct: 623 RMQKLSQAINLWFDHLPR 640



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 162/346 (46%), Gaps = 28/346 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGE-------FGV 54
           EA  +F  +   GC P+V+TY+ LI+GL R      A  LF +M  GN          G 
Sbjct: 441 EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGA 500

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
               D+     +++ +C+ G V KA +LL  + D  + PDVVTYN+++ G C   + + A
Sbjct: 501 NQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGA 560

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
            RLF E+  +G   + +T+  ++D L +  +  +A  L + ++  G  P+  +YN++M  
Sbjct: 561 LRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRS 620

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK-- 232
            C   ++++A  L+   + +  K+N+ +   +I+   K  E EG L    E + + IK  
Sbjct: 621 LCRMQKLSQAINLW--FDHLPRKYNLLAQDEVISSARKKFE-EGCLH---EAVRELIKID 674

Query: 233 -----PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                     Y    IGL +  ++E A K+F  ++  G+             LC  G + 
Sbjct: 675 QEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLG 734

Query: 288 EALELFRTLRILKCELDIRSY--SCLIDGLCKSGRLK----IAWEL 327
            A+++   L  LK    +R Y  + L+  LC   R K    +AW +
Sbjct: 735 AAVDVM--LYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRM 778



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 86/229 (37%), Gaps = 42/229 (18%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF +L+  G   + ITY TLI+ L R      AL LF+++++  G       P   I
Sbjct: 560 ALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGG------TPSMPI 613

Query: 63  YTTIIDGLCK------------------------------------EGFVDKAKELLLQM 86
           Y +++  LC+                                    EG + +A   L+++
Sbjct: 614 YNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKI 673

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
             +  + +   Y   + G   A    +A ++F  + + G+         +   LC  G +
Sbjct: 674 DQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNL 733

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
             A  ++   ++ G     +V N L+   C+  R   A+ L   M  +G
Sbjct: 734 GAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVG 782


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 198/390 (50%), Gaps = 7/390 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G +P+VI  + LI G         A+ + E ++  +G      KPD   Y  +I G CK 
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKAIQVME-ILEKHG------KPDVFAYNAVISGFCKA 159

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
             VD A ++L +MK +   PDVVTYN +I  FC     + A R+  +++    +P V+T+
Sbjct: 160 DRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITY 219

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           +++++     G ++EA +LL+ M+  G+RP+ + YN +++G C  G ++RA E    +  
Sbjct: 220 TILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISK 279

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC   V +Y+IL+       + E    L S+ML KG +P  +TY+TL   L    +++ 
Sbjct: 280 NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDE 339

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           A  +   M+   +A D ++Y   I  LC+ G +  A+E    +       DI SY+ ++ 
Sbjct: 340 AKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILA 399

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
            LCK+G    A  +F  L       +  +YN +  AL + G   +A  + L+M + G+ P
Sbjct: 400 SLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           D + +N+L+    R+    + +ELL  M E
Sbjct: 460 DEITYNSLISCLCRDGLVDQAIELLVDMFE 489



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 194/384 (50%), Gaps = 42/384 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ +  ++K  G EP+V+TY+ LI   C  G   +AL + ++++  N      CKP  + 
Sbjct: 165 ASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDN------CKPTVIT 218

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGF----------------- 105
           YT +I+    +G +D+A +LL +M  + + PD  TYN V+ G                  
Sbjct: 219 YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRIS 278

Query: 106 ---CYANDS----------NEAK-----RLFIEMMDQGVQPNVVTFSVIMDELCKNGKME 147
              C A  S          NE K     +L  +M+ +G +PN +T+S ++  LC++GK++
Sbjct: 279 KNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKID 338

Query: 148 EASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILI 207
           EA  +L++M +  + P+ + Y+ L+   C  G+V+ A E    M S G   ++ SY+ ++
Sbjct: 339 EAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSIL 398

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
              CKN   + AL+++ ++   G  P   +YNTLF  L+      RA  +  EM  +G+ 
Sbjct: 399 ASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGID 458

Query: 268 ADTWAYRTFIDGLCKNGYIVEALELFRTL-RILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
            D   Y + I  LC++G + +A+EL   +    KC+  + SY+ ++ GLCK  R+  A E
Sbjct: 459 PDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIE 518

Query: 327 LFHSLPRGVLIADVVTYNIMIHAL 350
           +  ++     + +  TY ++I  +
Sbjct: 519 VLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 184/356 (51%), Gaps = 7/356 (1%)

Query: 26  INGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQ 85
           +N  C++     +L   + M+N         KPD ++ T +I G      ++KA +++ +
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRG------YKPDVILCTKLIKGFFNMKKIEKAIQVM-E 136

Query: 86  MKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
           + +K+  PDV  YN+VI GFC A+  + A ++   M  +G +P+VVT+++++   C  G+
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           ++ A ++++ +++   +P    Y  L++     G ++ A +L   M S G + + ++Y++
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++NG CK   ++ A    S +   G    V TYN L   L    + E   KL  +M   G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y T I  LC++G I EA  + + ++      D  SY  LI  LC+ G++ +A 
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTL 381
           E    +  G  + D+++YN ++ +LC +G  D+A ++F  +   G  P+  ++NTL
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 169/333 (50%), Gaps = 1/333 (0%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           CK    D++   L  M ++   PDV+    +I+GF       +A ++ +E++++  +P+V
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV-MEILEKHGKPDV 146

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
             ++ ++   CK  +++ AS++L+ M + G  P+   YN L+  FC  GR++ A  +   
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +    CK  V +Y+ILI        I+ A+ L  EMLS+G++P   TYN +  G+ +   
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           ++RAF+    + ++G  A    Y   +  L   G      +L   + +  CE +  +YS 
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI  LC+ G++  A  +   +    L  D  +Y+ +I ALC +GK+D A +   DM + G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
             PD +++N+++    +N    + + +  ++ E
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGE 419



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 163/321 (50%), Gaps = 30/321 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-------------------LF 42
           EA  L  ++ + G  P+  TY+ ++NG+C+ G    A                     L 
Sbjct: 234 EAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293

Query: 43  EEMIN-GNGEFGVV---------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNIN 92
            +++N G  E+G           C+P+ + Y+T+I  LC++G +D+AK +L  MK+K + 
Sbjct: 294 RDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA 353

Query: 93  PDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQL 152
           PD  +Y+ +I   C     + A     +M+  G  P++++++ I+  LCKNG  +EA  +
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCK 212
            E + ++G  PNA  YNTL      +G   RA  + + M S G   +  +Y+ LI+  C+
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473

Query: 213 NKEIEGALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  ++ A+ L  +M  S+  +PTV++YNT+ +GL ++ ++  A ++   M   G   +  
Sbjct: 474 DGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNET 533

Query: 272 AYRTFIDGLCKNGYIVEALEL 292
            Y   I G+   G+  +A+EL
Sbjct: 534 TYTLLIQGIGFAGWRYDAMEL 554



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 138/282 (48%), Gaps = 1/282 (0%)

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           DQ        F   ++  CK+ K +E+   L+ M+  G +P+  +   L+ GF    ++ 
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           +A ++   +E  G K +VF+Y+ +I+G+CK   ++ A  +   M  +G +P VVTYN L 
Sbjct: 130 KAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILI 188

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                  +++ A ++ D++ +         Y   I+     G I EA++L   +      
Sbjct: 189 GNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            D  +Y+ +++G+CK G L  A+E    + +   +A V TYNI++  L  +GK +    L
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKL 308

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             DM  KG  P+ + ++TL+    R+ +  +   +L  M E+
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEK 350



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 7/159 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +F KL   GC PN  +Y+TL   L  +G  I AL +  EM++ NG       PD +
Sbjct: 409 EALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLS-NG-----IDPDEI 462

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQM-KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            Y ++I  LC++G VD+A ELL+ M + +   P V++YN+V+ G C      +A  +   
Sbjct: 463 TYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAA 522

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
           M+++G  PN  T+++++  +   G   +A +L  L++ +
Sbjct: 523 MVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNM 561



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  +  ++ + G +P+ ITY++LI+ LCR G    A+ L  +M          C+P  
Sbjct: 443 IRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEK-----CQPTV 497

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYAN---DSNEAKRL 117
           + Y T++ GLCK   +  A E+L  M ++   P+  TY  +I+G  +A    D+ E   L
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANL 557

Query: 118 FIEM 121
            + M
Sbjct: 558 LVNM 561


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 202/372 (54%), Gaps = 12/372 (3%)

Query: 1   MEAAALFTKLKAFGC-EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPD 59
           M A A+F ++   G  +P+V TY+T+I G C+ G    A N+F+EM          CKP+
Sbjct: 234 MLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---------GCKPN 284

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKD-KNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
            V Y T+I+G CK+G ++ A +++ QM + ++  PD VTY ++I G+C   +  EA +  
Sbjct: 285 LVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYM 344

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ +  +PNV+T++ I+  LC NG ++EA +++  M   G++ N   + +++ G C+ 
Sbjct: 345 EEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVV 404

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G+++ A      M  +G + +  +Y +++N YCK  + + A+SL  EM S+GI P+V ++
Sbjct: 405 GKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSF 464

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEALELFRTLR 297
           N +F  L E  + ++A  +  +M++ G   +  +Y T IDGLCK  G + E  E    + 
Sbjct: 465 NAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMC 524

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD   YS L+ G C+ G   +A  LF  +     + ++ ++   +  L A  K  
Sbjct: 525 RNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAF 584

Query: 358 KAHDLFLDMEAK 369
           +    F +M  +
Sbjct: 585 EVEKFFEEMSRR 596



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 190/388 (48%), Gaps = 10/388 (2%)

Query: 19  VITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDK 78
           + +Y+ ++    +    ++A  +F++++    + GVV KPD   YTTII G CK G ++ 
Sbjct: 217 LFSYNAILGVFVKANRIMLARAVFDQIV----KEGVV-KPDVSTYTTIIRGYCKMGMIEN 271

Query: 79  AKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMD-QGVQPNVVTFSVIM 137
           AK +  +M  K   P++VTYN++I GFC       A ++  +M + +   P+ VT++ ++
Sbjct: 272 AKNVFDEMGCK---PNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLI 328

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           D  CK G++EEA + +E M+     PN   YN ++ G CL G V+ AK +   M   G K
Sbjct: 329 DGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLK 388

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +++ ++ G C   +++ A     EM+  G++     Y  +     +I + + A  L
Sbjct: 389 DNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISL 448

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
             EM+  G+     ++      L ++G   +A  + R ++ L C  +  SYS +IDGLCK
Sbjct: 449 LKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCK 508

Query: 318 S-GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           + GR+    E    + R     D   Y+ ++   C DG  D A  LF +M   G   +  
Sbjct: 509 AKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLE 568

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
           +F   + G     +  +V +    M  R
Sbjct: 569 SFLAFVKGLSAKEKAFEVEKFFEEMSRR 596



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 183/345 (53%), Gaps = 13/345 (3%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           GC+PN++TY+T+ING C+ G    A+ + ++M          C PD V YTT+IDG CK 
Sbjct: 280 GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETED-----CMPDTVTYTTLIDGYCKR 334

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++A + + +M  +N  P+V+TYN++I G C   + +EAKR+   M   G++ NV T 
Sbjct: 335 GELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH 394

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + I+  LC  GK+++A++ L+ M+ +G+  +A  Y  +++ +C  G+ + A  L   M+S
Sbjct: 395 TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE----IH 249
            G   +V S++ +     ++ + + A  +  +M   G  P  ++Y+T+  GL +    +H
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMH 514

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +VE   +  D+M R+G   D   Y   + G C++G    A+ LF  +  +   +++ S+ 
Sbjct: 515 EVE---EFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFL 571

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY-NIMIHALCAD 353
             + GL    +     + F  + R     D+  Y  I+   LC +
Sbjct: 572 AFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCKN 616



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 8/220 (3%)

Query: 187 LFVSMESMGCKHNV---FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFI 243
           LF +  S+   H+    F+ +  +  Y    +I GA+  +           + +YN +  
Sbjct: 166 LFSTASSLLQSHHRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILG 225

Query: 244 GLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
              + +++  A  +FD++ + GV   D   Y T I G CK G I  A  +F     + C+
Sbjct: 226 VFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE---MGCK 282

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGV-LIADVVTYNIMIHALCADGKMDKAHD 361
            ++ +Y+ +I+G CK G ++ A ++   +      + D VTY  +I   C  G++++A  
Sbjct: 283 PNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMK 342

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
              +M ++   P+ + +N ++ G   N    +   ++ RM
Sbjct: 343 YMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRM 382


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 199/386 (51%), Gaps = 7/386 (1%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAK 80
           T + +I+  C+ G+    +  F +M+    E G+   P+ + +T +I+GLCK+G + +A 
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMV----EMGLA--PNVINFTALINGLCKQGSIKQAF 314

Query: 81  ELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM-DQGVQPNVVTFSVIMDE 139
           ELL +M  +   P+V T+ ++I G C    + +A RLF++++   G +PNV T++ +++ 
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            CK  K+  A  LL  M + G+ PN   Y TL+DG C  G   RA EL   M   G   N
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           +++Y+ +I+G CK   ++ A  L +++   G++   VTY  L           R+   F+
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN 494

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M + G   D  +Y T I   C+   + E+  LF     L      ++Y+ +I G C+ G
Sbjct: 495 KMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
              +A +LF  +       D +TY  +I  LC + K+D A +L+  M  KG++P  V   
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 380 TLMLGCIRNNETSKVVELLHRMDERN 405
           TL     + +++S  + +L R+++R 
Sbjct: 615 TLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 201/405 (49%), Gaps = 14/405 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  ++   G +PNV T++TLI+GLC+ G T  A  LF +++  +G      KP+  
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY-----KPNVH 366

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +I+G CKE  +++A+ LL +M+++ + P+  TY ++I G C   +   A  L   M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+ T++ I+D LCK G ++EA +LL  +   G++ +   Y  LM   C     
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NR+   F  M  +G   ++ SY+ LI+ +C+ K+++ +  L+ E +S G+ PT  TY ++
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR---I 298
             G         A KLF  M  HG A D+  Y   I GLCK   + +A  L+  +    +
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             CE+   +   L    CK      A  +   L +   I    T N ++  LC++GK+D 
Sbjct: 607 SPCEV---TRLTLAYEYCKKDDSSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDM 660

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           A   F  +  K    + V     M  C  +N+   V EL  R+ E
Sbjct: 661 AALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 193/403 (47%), Gaps = 7/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +F ++   G  P+ +++  ++   C  G  + A    E+ +N   E G +   D   
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----EKWLNAMVERGFIV--DNAT 261

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
            T IID  C++G+V++      +M +  + P+V+ + ++I G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV T + ++D LCK G  E+A +L L+L+   G +PN   Y  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           NRA+ L   M+  G   N  +Y+ LI+G+CK      A  L   M  +G  P + TYN +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +   ++ A++L +++  HG+ AD   Y   +   C+      +L  F  +  +  
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI SY+ LI   C+  ++K +  LF       LI    TY  MI   C  G    A  
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF  M   G APD + +  L+ G  + ++      L   M ++
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 38  ALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVT 97
           A+N+  EM N     G+V     +    ++D     G V+ A+ + ++M  + ++PD V+
Sbjct: 173 AVNMVVEMQNQ----GLVXSTQTL--NCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 98  YNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMI 157
           +  ++   C      EA++    M+++G   +  T ++I+D  C+ G +         M+
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+ PN   +  L++G C  G + +A EL   M   G K NV++++ LI+G CK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 218 GALSLYSEML-SKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  L+ +++ S G KP V TY  +  G  +  ++ RA  L   MQ  G+  +T  Y T 
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVL 336
           IDG CK G  V A EL   +       +I +Y+ +IDGLCK G L  A+ L + +    L
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
            AD VTY I++   C     +++   F  M   G  PD  ++ TL+
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 146/291 (50%), Gaps = 1/291 (0%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA  + +EM +QG+  +  T + ++D     G +E A  +   M Q GV P+   +  ++
Sbjct: 172 EAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
              C  GRV  A++   +M   G   +  + +++I+ +C+   +   +  + +M+  G+ 
Sbjct: 232 VACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLA 291

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P V+ +  L  GL +   +++AF+L +EM R G   + + + T IDGLCK G+  +A  L
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 293 F-RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           F + +R    + ++ +Y+ +I+G CK  +L  A  L   +    L+ +  TY  +I   C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             G   +A++L   M  +G +P+   +N ++ G  +     +   LL+++ 
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 49/96 (51%)

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
            C++    ++G+LK A  +   +    L+    T N ++      G ++ A ++F++M  
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +GV+PDCV+F  +++ C       +  + L+ M ER
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVER 253


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 222/443 (50%), Gaps = 56/443 (12%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A AL+ ++ A GC PN  TY+ L++GLC+ G  + AL LF+EM+    + G+   P+   
Sbjct: 193 ALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEML----QRGIT--PNVKT 246

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA-KRL---- 117
           +T ++  +C  G + +A+ LL  M+DK   PD VTYN+ + G C A   +EA +RL    
Sbjct: 247 HTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 306

Query: 118 -------------------------------FIEMMDQG-VQPNVVTFSVIMDELCKNGK 145
                                          ++E+++Q    P++V +++++    + G+
Sbjct: 307 RTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGR 366

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSI 205
           +++A    + M +    P+ F YNTL+   C +G ++ A+ L   M       +  +++I
Sbjct: 367 IDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTI 426

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ--- 262
           +I+G CK + ++ A+ ++  M+  G  PTV+TYN L  GL+  H++E A  LF +M+   
Sbjct: 427 MIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN 486

Query: 263 ------RHGVAA----DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
                 R  + A    D+ + +  +D +C++G +++A +L R +       D+ +Y+ L+
Sbjct: 487 NPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLL 546

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +GLCK   L  A  LF  L       D +TY  +I +L    + + A  LF D+   G  
Sbjct: 547 NGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGT 606

Query: 373 PDCVAFNTLMLGCIRNNETSKVV 395
           P    +N++M    R N+ S+ +
Sbjct: 607 PSLSIYNSIMRSLCRMNKLSQAI 629



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 193/431 (44%), Gaps = 58/431 (13%)

Query: 11  KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGL 70
           +A G +P    +  LI      G    A++ F  M    GEFG  C+P   +Y  ++  L
Sbjct: 129 QAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRM---EGEFG--CRPTTFVYNAVLRVL 183

Query: 71  CKEG-FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
              G  V  A  L  +M      P+  TYN ++ G C    + +A +LF EM+ +G+ PN
Sbjct: 184 VASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPN 243

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE--- 186
           V T ++++  +C  G+++EA  LL  M   G  P+   YN  + G C  GRV+ A E   
Sbjct: 244 VKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLE 303

Query: 187 ---------------------LFVS-------------MESMGCKHNVFSYSILINGYCK 212
                                LF++             +E      ++  Y+I+I G  +
Sbjct: 304 ALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAE 363

Query: 213 NKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A + + EM  K   P    YNTL   L +   ++ A  L  EM ++ V  DT  
Sbjct: 364 AGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNT 423

Query: 273 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLP 332
           +   I GLCK   + EA+++F  +  + C   + +Y+ LIDGL ++ RL+ A  LF+ + 
Sbjct: 424 HTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKME 483

Query: 333 RG-------------VLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
            G               + D  +   ++ ++C  G++ KA+ L   +   GV PD V +N
Sbjct: 484 VGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYN 543

Query: 380 TLMLGC--IRN 388
           TL+ G   +RN
Sbjct: 544 TLLNGLCKVRN 554



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 205/449 (45%), Gaps = 49/449 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------- 45
           EA  L   ++  GC P+ +TY+  ++GLC+ G    A+   E +                
Sbjct: 262 EAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCL 321

Query: 46  -----INGNGEFGVVC----------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKN 90
                + G  E G  C           PD V+YT +I G  + G +D A     +MK+K 
Sbjct: 322 IDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKR 381

Query: 91  INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             PD   YN++++  C + D + A+ L  EM    V  +  T ++++  LCK   ++EA 
Sbjct: 382 FTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAM 441

Query: 151 QLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME-----------SMGCKHN 199
           Q+ + M+++G  P    YN L+DG     R+  A+ LF  ME           ++G    
Sbjct: 442 QVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQV 501

Query: 200 VFSYSI--LINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
             S S+  L++  C++ ++  A  L   ++  G+ P VVTYNTL  GL ++  ++ A +L
Sbjct: 502 KDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRL 561

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F E+Q  G + D   Y T ID L +     +A+ LF+ +  +     +  Y+ ++  LC+
Sbjct: 562 FRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCR 621

Query: 318 SGRLKIAWELF--HSLPRGVLIA-DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
             +L  A   +  H L +  L A D V  +        +G +D+A    + ++ +  + +
Sbjct: 622 MNKLSQAINFWFDHLLKKYNLSAQDEVIAS--ARKKFEEGSLDEAVRELIKIDQEYGSVN 679

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              +   ++G I+       +++ H ++E
Sbjct: 680 SCPYTIWLIGLIQARRIDDALKIFHILEE 708



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 4/285 (1%)

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMI-QIGVRPNAFVYNTLMDGFCLTGRV-N 182
           G+QP    F  ++      G+  EA      M  + G RP  FVYN ++     +G V  
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L+  M + GC  N  +Y++L++G CK      AL L+ EML +GI P V T+  L 
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC- 301
             +    Q++ A  L + M+  G   D   Y  F+ GLCK G + EA+E    LR     
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTF 311

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            L ++ YSCLIDGL  +GR +  ++ +   L +     D+V Y IMI      G++D A 
Sbjct: 312 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAF 371

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
             F +M+ K   PD   +NTL+     + +      L+  M + N
Sbjct: 372 AFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNN 416



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 18/289 (6%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPD 59
           ++A  L   +   G  P+V+TY+TL+NGLC+  +   AL LF E+ + G   F +    D
Sbjct: 521 LKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG---FSL----D 573

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + Y T+ID L +    + A  L   +      P +  YNS++R  C  N  ++A   + 
Sbjct: 574 EITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWF 633

Query: 120 EMM----DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           + +    +   Q  V+  +    E    G ++EA + L  + Q     N+  Y   + G 
Sbjct: 634 DHLLKKYNLSAQDEVIASARKKFE---EGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGL 690

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
               R++ A ++F  +E  G        + L    C  K ++ A+ +    L+K    + 
Sbjct: 691 IQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSR 750

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY-RTFIDGLCKN 283
              N L   L   H+ + A  L   M  H V  D  AY R    GL  N
Sbjct: 751 HVGNRLLSSLCIRHRRKDAQALAWRM--HLVGYDMDAYLRESTKGLLYN 797


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 41/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  +F  +  +G  P+V T + ++  + ++G  +   +  +EM+        +C PD  
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 234

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LC EG  +K+  L+ +M+     P +VTYN+V+  +C       A  L   M
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V T+++++ +LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P+ V+Y  L
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EA+ L   +     
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIADVV-------------- 341
           + DI +YS LI+G CK GR K A E+   +      P G++ + ++              
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534

Query: 342 ---------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                          T+N+++ +LC  GK+ +A +    M + G+ P+ V+F+ L+ G  
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594

Query: 387 RNNETSKVVELLHRMDE 403
            + E  K   +   M +
Sbjct: 595 NSGEGLKAFSVFDEMTK 611



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 201/401 (50%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L  ++ +FG  PN +T++ LI+G    G+   AL +F  M+   G       P  V 
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAKG-----LTPSEVS 410

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++DGLCK    D A+   ++MK   +    +TY  +I G C     +EA  L  EM 
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P++VT+S +++  CK G+ + A +++  + ++G+ PN  +Y+TL+   C  G + 
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P  V+++ L 
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +   
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D   Y+ L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK   A   
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 710

Query: 363 FLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             + EA+G V P+ V +   + G  +  +    +    +MD
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +K+ G + +V TY+ LI+ LCR+        L  +M         +  P+ V 
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR------MIHPNEVT 340

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G   EG V  A +LL +M    ++P+ VT+N++I G     +  EA ++F  M 
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++ V++D LCKN + + A      M + GV      Y  ++DG C  G ++
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G   ++ +YS LING+CK    + A  +   +   G+ P  + Y+TL 
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  ++ A ++++ M   G   D + +   +  LCK G + EA E  R +      
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  S+ CLI+G   SG    A+ +F  + +        TY  ++  LC  G + +A   
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              + A   A D V +NTL+    ++   +K V L   M +R+
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +++ L  K++  G  P ++TY+T+++  C+ G    A+ L + M +     GV    D  
Sbjct: 251 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK----GV--DADVC 304

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC+   + K   LL  M+ + I+P+ VTYN++I GF        A +L  EM
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN VTF+ ++D     G  +EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+  ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI P +VTY+ L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +   
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ L+  LCK+G++  A E    +    ++ + V+++ +I+     G+  KA  
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLH 399
           +F +M   G  P    + +L+ G  +     E  K ++ LH
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 162/330 (49%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C  +  +Y  +I    +EG +  + E+   M     NP V T N+++     + +    
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                EM+ + + P+V TF+++++ LC  G  E++S L++ M + G  P    YNT++  
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P 
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYNTL  G     +V  A +L +EM   G++ +   +   IDG    G   EAL++F 
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +          SY  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +D+A  L  +M   G+ PD V ++ L+ G
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALING 487



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 191/433 (44%), Gaps = 42/433 (9%)

Query: 1    MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
            ++A ++F ++   G  P   TY +L+ GLC+ GH   A    + +        V    D 
Sbjct: 600  LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 653

Query: 61   VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            V+Y T++  +CK G + KA  L  +M  ++I PD  TY S+I G C    +  A     E
Sbjct: 654  VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713

Query: 121  MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
               +G V PN V ++  +D + K G+ +      E M  +G  P+    N ++DG+   G
Sbjct: 714  AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773

Query: 180  RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
            ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI P  +T +
Sbjct: 774  KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 834  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893

Query: 300  KCELD-----------------------------------IRSYSCLIDGLCKSGRLKIA 324
               LD                                    R Y  LI+GLC+ G +K A
Sbjct: 894  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953

Query: 325  WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            + +   +    +    V  + M+ AL   GK D+A  L   M    + P   +F TLM  
Sbjct: 954  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013

Query: 385  CIRNNETSKVVEL 397
            C +N    + +EL
Sbjct: 1014 CCKNGNVIEALEL 1026



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 195/415 (46%), Gaps = 30/415 (7%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE----------------- 44
            +A +LF ++      P+  TY++LI+GLCR G T++A+   +E                 
Sbjct: 671  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730

Query: 45   ----MINGNGEFGVVCK---------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                   G  + G+  +         PD V    +IDG  + G ++K  +LL +M ++N 
Sbjct: 731  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             P++ TYN ++ G+    D + +  L+  ++  G+ P+ +T   ++  +C++  +E   +
Sbjct: 791  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            +L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++   
Sbjct: 851  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +N   + +  +  EM  +GI P    Y  L  GL  +  ++ AF + +EM  H +     
Sbjct: 911  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            A    +  L K G   EA  L R +  +K    I S++ L+   CK+G +  A EL   +
Sbjct: 971  AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                L  D+V+YN++I  LCA G M  A +L+ +M+  G   +   +  L+ G +
Sbjct: 1031 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 46/440 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAV 61
           A  +  ++   G  PN I YSTLI   CR G    A+ ++E MI  G+         D  
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHF 549

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++  LCK G V +A+E +  M    I P+ V+++ +I G+  + +  +A  +F EM
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P   T+  ++  LCK G + EA + L+ +  +    +  +YNTL+   C +G +
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN----------KEIEG------------- 218
            +A  LF  M       + ++Y+ LI+G C+           KE E              
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 729

Query: 219 -------------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                         +    +M + G  P +VT N +  G   + ++E+   L  EM    
Sbjct: 730 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y   + G  K   +  +  L+R++ +     D  +   L+ G+C+S  L+I  
Sbjct: 790 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 326 ELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  + + RGV + D  T+N++I   CA+G+++ A DL   M + G++ D    + ++  
Sbjct: 850 KILKAFICRGVEV-DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908

Query: 385 CIRNNETSKVVELLHRMDER 404
             RN+   +   +LH M ++
Sbjct: 909 LNRNHRFQESRMVLHEMSKQ 928



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 2/314 (0%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N NP V  Y+ +IR +       ++  +F  M   G  P+V T + I+  + K+G+    
Sbjct: 160 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
              L+ M++  + P+   +N L++  C  G   ++  L   ME  G    + +Y+ +++ 
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCK    + A+ L   M SKG+   V TYN L   L   +++ + + L  +M++  +  +
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y T I+G    G ++ A +L   +       +  +++ LIDG    G  K A ++F+
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    L    V+Y +++  LC + + D A   ++ M+  GV    + +  ++ G  +N 
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457

Query: 390 ETSKVVELLHRMDE 403
              + V LL+ M +
Sbjct: 458 FLDEAVVLLNEMSK 471



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 117/241 (48%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N  VY+ L+  +   G +  + E+F  M   G   +V++ + ++    K+ E     S  
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EML + I P V T+N L   L      E++  L  +M++ G A     Y T +   CK 
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G    A+EL   ++    + D+ +Y+ LI  LC+S R+   + L   + + ++  + VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I+    +GK+  A  L  +M + G++P+ V FN L+ G I      + +++ + M+ 
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 404 R 404
           +
Sbjct: 402 K 402


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 205/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  +    C PN +T+S+LI+GL + G    A +L+E+M++     G V  P A+
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD----CGHV--PGAI 510

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I    K G  +   ++  +M     +PD+   N+ +     A ++ + + LF E+
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 570

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+  ++S+++  L K G   E  +L   M + G   +   YN ++DGFC +G+V
Sbjct: 571 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 630

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A +L   M+  G    V +Y  +I+G  K   ++ A  L+ E  S GIK  VV Y++L
Sbjct: 631 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 690

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  + + +   +D L K   I EAL  F++++ LKC
Sbjct: 691 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 750

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L  + +TY  MI  L   G + +A  
Sbjct: 751 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 810

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   +A G  PD  ++N ++ G    N+ 
Sbjct: 811 LFSRFKANGGIPDSASYNAMIEGLSSANKA 840



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++ A G  P+  +YS LI+GL + G       LF  M     E G  C  D   Y 
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM----KEQG--CVLDTHAYN 618

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E    
Sbjct: 619 AVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 678

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV +S ++D   K G+++EA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +YSILING C+ ++   A   + EM   G+KP  +TY T+  G
Sbjct: 739 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 798

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LF   + +G   D+ +Y   I+GL      ++A  LF   R+  C + 
Sbjct: 799 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 858

Query: 305 IRSYSCLIDGLCKS 318
            ++   L+D L K+
Sbjct: 859 TKTCVVLLDALHKA 872



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 197/402 (49%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  + KA G  P+VI Y+ ++  L +      AL +FEEM            P+  
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVP 405

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC+EG ++ A E+   M+   + P+V+T N +I   C A    EA  +F  M
Sbjct: 406 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PN VTFS ++D L K G++++A  L E M+  G  P A VY +L+  F   GR 
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 525

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M   GC  ++   +  ++   K  E E   +L+ E+ + G  P   +Y+ L
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 585

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +       ++LF  M+  G   DT AY   IDG CK+G + +A +L   +++   
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 705

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  ++  KG+ P+   +N L+   ++  E ++ +     M +
Sbjct: 706 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 747



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++ F   P    Y+ LI  L         L LF +M     E  V       
Sbjct: 178 EAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVH------ 231

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+I    +EG VD A  LL +MK  +++ D+V YN  I  F  A   + + + F EM
Sbjct: 232 LFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEM 291

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+ VT++ ++  LCK  +++EA +L E + Q    P A+ YNT++ G+   G+ 
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKF 351

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  L    ++ G   +V +Y+ ++    K + +E AL ++ EM    + P V TYN L
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNIL 410

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L    ++  A ++ D+M+R G+  +       ID LCK   + EA  +F  +    C
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  ++S LIDGL K GR+  A+ L+  +     +   + Y  +I +    G+ +  H 
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
           ++ +M   G +PD    NT M    +  ET K   L   ++
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 159/344 (46%), Gaps = 1/344 (0%)

Query: 58  PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRL 117
           P + I   ++    K   + +A +++  M+     P    Y  +I       + +    L
Sbjct: 158 PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217

Query: 118 FIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M + G + NV  F+ ++    + G+++ A  LL+ M    +  +  +YN  +D F  
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
            G+V+ + + F  M+S G   +  +Y+ +I   CK   ++ A+ L+ ++      P    
Sbjct: 278 AGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA 337

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           YNT+ +G     + + A+ L +  +  G      AY   +  L K   + EAL +F  ++
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++ +Y+ LID LC+ G+L  A E+   + R  L  +V+T NIMI  LC   K++
Sbjct: 398 -RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +A  +F  M+ K   P+ V F++L+ G  +         L  +M
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM 500



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 36/343 (10%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YNS++       + +  +R+  EM   G  P+      ++    K+ K+ EA  +++ M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            +   RP    Y  L+         +    LF  M+ +G + NV  ++ LI  + +   +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + ALSL  EM S  +   +V YN       +  +V+ ++K F EM+ HG+  D   Y + 
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 277 IDGLCKNGYIVEALELFRTL---RILKCEL------------------------------ 303
           I  LCK   + EA+ELF  L   R + C                                
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 304 --DIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y+C++  L K  R++ A  +F  + R   + +V TYNI+I  LC +GK++ A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALE 425

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           +  DME  G+ P+ +  N ++    +  +  +   +   MD++
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K   C PN ITYS LINGLCR      A   ++EM     + G+  KP+ +
Sbjct: 737 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM----QKLGL--KPNTI 790

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GL K G + +A  L  + K     PD  +YN++I G   AN + +A  LF E 
Sbjct: 791 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 850

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             +G   +  T  V++D L K   +E+A+
Sbjct: 851 RLKGCNIHTKTCVVLLDALHKAECLEQAA 879


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 201/392 (51%), Gaps = 9/392 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G   N    S  I   C  G+     +   E++ G  ++G+  +PD V +T  ID LCK 
Sbjct: 333 GRHLNAALLSLFIRKYCSDGY----FDKGWELLMGMKDYGI--RPDIVAFTVFIDKLCKA 386

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           GF+ +A  +L ++K   I+ D V+ +SVI GFC      EA +L        ++PN+  +
Sbjct: 387 GFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVY 443

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           S  +  +C  G M  AS + + + ++G+ P+ + Y T++DG+C  GR ++A + F ++  
Sbjct: 444 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLK 503

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            G   ++ +Y++LI    K   I  A S++  M ++G+ P VVTYN L  G  + HQ+ +
Sbjct: 504 SGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNK 563

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
            F+L DEM+  G++ D   Y   I  +   GY+ EA E+   L          +++ +I 
Sbjct: 564 VFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIG 623

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GL K G  + A+ L+  +    +  DVVT + ++H  C   +M+KA  LF  +   G+ P
Sbjct: 624 GLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKP 683

Query: 374 DCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           D V +NTL+ G     +  K  EL+  M +R 
Sbjct: 684 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 715



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 149/281 (53%), Gaps = 8/281 (2%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPD 59
           + A+ +F ++   G  P+   Y+T+I+G C  G T  A   F  ++ +GN        P 
Sbjct: 457 LRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGN-------PPS 509

Query: 60  AVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
            + YT +I    K G +  A+ +   MK + ++PDVVTYN+++ G+   +  N+   L  
Sbjct: 510 LITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELID 569

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+V T+++++  +   G ++EA++++  +I+ G  P+A  +  ++ G    G
Sbjct: 570 EMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRG 629

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
               A  L+  M  +  K +V + S L++GYC+ + +E A+ L+ ++L  G+KP VV YN
Sbjct: 630 DFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYN 689

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           TL  G   +  +E+A +L   M + G+  +   +   + GL
Sbjct: 690 TLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGL 730



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 171/349 (48%), Gaps = 9/349 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++  KLK FG   + ++ S++I+G C+ G    A+ L               +P+  
Sbjct: 391 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---------RLRPNIF 441

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y++ +  +C  G + +A  +  ++ +  + PD   Y ++I G+C    +++A + F  +
Sbjct: 442 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGAL 501

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+++T+++++    K G + +A  +  +M   G+ P+   YN LM G+  T ++
Sbjct: 502 LKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQL 561

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+  EL   M S G   +V +Y+ILI+       ++ A  + SE++ +G  P+ + +  +
Sbjct: 562 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDV 621

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +    + AF L+  M    V  D       + G C+   + +A+ LF  L     
Sbjct: 622 IGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGL 681

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
           + D+  Y+ LI G C  G ++ A EL   + +  ++ +  T++ ++  L
Sbjct: 682 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGL 730



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 153/345 (44%), Gaps = 3/345 (0%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            ++  +ID   KE  VD A +L  ++    I P      S++     A+    A+     
Sbjct: 269 TVFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEH 328

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G   N    S+ + + C +G  ++  +LL  M   G+RP+   +   +D  C  G 
Sbjct: 329 MLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGF 388

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A  +   ++  G   +  S S +I+G+CK  + E A+ L   + S  ++P +  Y++
Sbjct: 389 LREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSS 445

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
               +     + RA  +F E+   G+  D + Y T IDG C  G   +A + F  L    
Sbjct: 446 FLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSG 505

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
               + +Y+ LI    K G +  A  +F  +    L  DVVTYN +++      +++K  
Sbjct: 506 NPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVF 565

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +L  +M + G++PD   +N L+   +      +  E++  +  R 
Sbjct: 566 ELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRG 610


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 205/390 (52%), Gaps = 6/390 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA ++F  +    C PN +T+S+LI+GL + G    A +L+E+M+    + G V  P A+
Sbjct: 212 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML----DCGHV--PGAI 265

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I    K G  +   ++  +M     +PD+   N+ +     A ++ + + LF E+
Sbjct: 266 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+  ++S+++  L K G   E  +L   M + G   +   YN ++DGFC +G+V
Sbjct: 326 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 385

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A +L   M+  G    V +Y  +I+G  K   ++ A  L+ E  S GIK  VV Y++L
Sbjct: 386 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  + + +   +D L K   I EAL  F++++ LKC
Sbjct: 446 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 505

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +YS LI+GLC+  +   A+  +  + +  L  + +TY  MI  L   G + +A  
Sbjct: 506 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 565

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           LF   +A G  PD  ++N ++ G    N+ 
Sbjct: 566 LFSRFKANGGIPDSASYNAMIEGLSSANKA 595



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 6/314 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           ALF ++ A G  P+  +YS LI+GL + G       LF  M     E G  C  D   Y 
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM----KEQG--CVLDTHAYN 373

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E    
Sbjct: 374 AVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 433

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV +S ++D   K G+++EA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +YSILING C+ ++   A   + EM   G+KP  +TY T+  G
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LF   + +G   D+ +Y   I+GL      ++A  LF   R+  C + 
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 613

Query: 305 IRSYSCLIDGLCKS 318
            ++   L+D L K+
Sbjct: 614 TKTCVVLLDALHKA 627



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 197/402 (49%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  + KA G  P+VI Y+ ++  L +      AL +FEEM            P+  
Sbjct: 108 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVP 160

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC+EG ++ A E+   M+   + P+V+T N +I   C A    EA  +F  M
Sbjct: 161 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PN VTFS ++D L K G++++A  L E M+  G  P A VY +L+  F   GR 
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 280

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M   GC  ++   +  ++   K  E E   +L+ E+ + G  P   +Y+ L
Sbjct: 281 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +       ++LF  M+  G   DT AY   IDG CK+G + +A +L   +++   
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 401 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 460

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  ++  KG+ P+   +N L+   ++  E ++ +     M +
Sbjct: 461 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 502



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 17/393 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLING----------LCRTGHTIVALNLFEEMINGNGE 51
           EA  +   ++ F   P    Y+ LI            LC+      A+ LFE++      
Sbjct: 28  EAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRK- 86

Query: 52  FGVVCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDS 111
                 P A  Y T+I G    G  D+A  LL + K K   P V+ YN ++         
Sbjct: 87  -----VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 112 NEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTL 171
            EA R+F EM    V PNV T+++++D LC+ GK+  A ++ + M + G+ PN    N +
Sbjct: 142 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 172 MDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C   ++  A  +F  M+   C  N  ++S LI+G  K   ++ A SLY +ML  G 
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 232 KPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALE 291
            P  + Y +L    F+  + E   K++ EM   G + D     T++D + K G   +   
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 292 LFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALC 351
           LFR +       D RSYS LI GL K+G     +ELF+++     + D   YN +I   C
Sbjct: 321 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380

Query: 352 ADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             GK++KA+ L  +M+ KG  P  V + +++ G
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 413



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 1/263 (0%)

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
           LCK  +++EA +L E + Q    P A+ YNT++ G+   G+ + A  L    ++ G   +
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
           V +Y+ ++    K + +E AL ++ EM    + P V TYN L   L    ++  A ++ D
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M+R G+  +       ID LCK   + EA  +F  +    C  +  ++S LIDGL K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R+  A+ L+  +     +   + Y  +I +    G+ +  H ++ +M   G +PD    N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 380 TLMLGCIRNNETSKVVELLHRMD 402
           T M    +  ET K   L   ++
Sbjct: 304 TYMDCVFKAGETEKGRALFREIN 326



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 17/273 (6%)

Query: 142 KNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG-----------FCLTGRVNRAKELFVS 190
           K+ K+ EA  +++ M +   RP AF   T++ G            C   R++ A ELF  
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRP-AFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQ 80

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           +E        ++Y+ +I GY    + + A  L     +KG  P+V+ YN +   L +  +
Sbjct: 81  LEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRR 140

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           VE A ++F+EM+R  V  +   Y   ID LC+ G +  ALE+   +       ++ + + 
Sbjct: 141 VEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 199

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           +ID LCK+ +L+ A  +F  +   V   + VT++ +I  L   G++D A+ L+  M   G
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259

Query: 371 VAPDCVAFNTLM---LGCIRNNETSKVV-ELLH 399
             P  + + +L+     C R  +  K+  E++H
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 292



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +K   C PN ITYS LINGLCR      A   ++EM     + G+  KP+ +
Sbjct: 492 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM----QKLGL--KPNTI 545

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YTT+I GL K G + +A  L  + K     PD  +YN++I G   AN + +A  LF E 
Sbjct: 546 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 605

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEAS 150
             +G   +  T  V++D L K   +E+A+
Sbjct: 606 RLKGCNIHTKTCVVLLDALHKAECLEQAA 634



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 17/228 (7%)

Query: 189 VSMESMGCKHNVFSYSILINGYC-KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG--- 244
           +S+   G   N+   SI +   C K++++  A  +   M     +P    Y T+ IG   
Sbjct: 1   MSLSGFGPSSNI---SIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAY-TILIGKVG 56

Query: 245 --------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
                   L + ++++ A +LF++++++      +AY T I G    G   EA  L    
Sbjct: 57  LMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 116

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
           +       + +Y+C++  L K  R++ A  +F  + R   + +V TYNI+I  LC +GK+
Sbjct: 117 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKL 175

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           + A ++  DME  G+ P+ +  N ++    +  +  +   +   MD++
Sbjct: 176 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 200/374 (53%), Gaps = 10/374 (2%)

Query: 16  EPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGF 75
            P+  T++ +I+GLC+TG    A ++ ++M      +G++  P  V Y T+IDG  K G 
Sbjct: 185 SPDKFTFNIVISGLCKTGQLRKAGDVAKDMRG----WGLM--PSVVTYNTLIDGYYKWGR 238

Query: 76  VDKAKE---LLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVT 132
             K      LL +M    I+P+VVT+N +I G+C  ++   A ++F EM   G+  N+VT
Sbjct: 239 AGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVT 298

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ ++  LC+ GK+E++ +L+E M ++G+       N++++GFC  G +  A+     M 
Sbjct: 299 YTSLVSGLCREGKVEDSMKLVEEMEELGL-ATLPTLNSVLNGFCKKGMMVEAEGWVDGMA 357

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
             G K NV +Y+ LI+GY +  +++ A +    M  KGI P V TYN L  G        
Sbjct: 358 QKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWR 417

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
               L DEM+  GV AD   Y   I  LC  G + +A++L   +  +  E   R+Y+ +I
Sbjct: 418 SVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAII 477

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVA 372
           +G C+ G  K A ++   + +    A+VVT N+ +   C  GKMD+A+ +  +M  KG+ 
Sbjct: 478 NGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLV 537

Query: 373 PDCVAFNTLMLGCI 386
           P+ + +  +  G I
Sbjct: 538 PNRITYEIINSGMI 551



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 182/397 (45%), Gaps = 8/397 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           L+A       +    L+  L R    + A   F   +    ++    +P A     ++  
Sbjct: 107 LRALPASSRPLVADMLVLALARASQPLAAYGAF---LLAGADYPRY-RPSAFSVNALLAA 162

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           L +   VD A+        + ++PD  T+N VI G C      +A  +  +M   G+ P+
Sbjct: 163 LVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPS 222

Query: 130 VVTFSVIMD---ELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 186
           VVT++ ++D   +  + GKM     LL+ M Q G+ PN   +N L++G+C    +  A +
Sbjct: 223 VVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIK 282

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLF 246
           +F  M   G   N+ +Y+ L++G C+  ++E ++ L  EM   G+  T+ T N++  G  
Sbjct: 283 VFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFC 341

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIR 306
           +   +  A    D M + G+  +   Y T IDG  + G + EA      +       D++
Sbjct: 342 KKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVK 401

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+CLI G   S   +    L   +    + AD+VTYN++I ALC  G++ KA  L  +M
Sbjct: 402 TYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEM 461

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
              G+ P    +N ++ G     +     ++  RM++
Sbjct: 462 VEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEK 498



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 145/273 (53%), Gaps = 28/273 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM--------------ING 48
           A  +F +++  G   N++TY++L++GLCR G    ++ L EEM              +NG
Sbjct: 280 AIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNG 339

Query: 49  NGEFGVVC--------------KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPD 94
             + G++               KP+ V Y T+IDG  + G + +A      M  K I+PD
Sbjct: 340 FCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPD 399

Query: 95  VVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           V TYN +I GF  + D      L  EM + GV+ ++VT++V++  LC  G++ +A +LL+
Sbjct: 400 VKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLD 459

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+++G+ P    YN +++GFC  G    A ++ + ME    + NV + ++ +  +CK  
Sbjct: 460 EMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMG 519

Query: 215 EIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFE 247
           +++ A  + +EML KG+ P  +TY  +  G+ E
Sbjct: 520 KMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 552



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 147/284 (51%), Gaps = 7/284 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   G  PNV+T++ LING C+  +   A+ +FEEM     + G+    + V YT+
Sbjct: 248 LLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMR----QHGIPA--NMVTYTS 301

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           ++ GLC+EG V+ + +L+ +M++  +   + T NSV+ GFC      EA+     M  +G
Sbjct: 302 LVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG 360

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           ++PNVVT++ ++D   + GKM+EA+     M   G+ P+   YN L+ GF  +       
Sbjct: 361 MKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVS 420

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
            L   M+  G K ++ +Y++LI   C   E+  A+ L  EM+  G++P   TYN +  G 
Sbjct: 421 GLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            E    + A  +   M++    A+      F+   CK G + EA
Sbjct: 481 CEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEA 524



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 89/180 (49%), Gaps = 6/180 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A    +   G  P+V TY+ LI G   +        L +EM     E GV  K D V
Sbjct: 383 EATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEM----KETGV--KADLV 436

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC +G V KA +LL +M +  + P   TYN++I GFC   D+  A  + I M
Sbjct: 437 TYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRM 496

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                + NVVT +V +   CK GKM+EA+ +L  M++ G+ PN   Y  +  G    G V
Sbjct: 497 EKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYV 556



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%)

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           S + L+  L ++ R+ +A   F +  R  +  D  T+NI+I  LC  G++ KA D+  DM
Sbjct: 155 SVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDM 214

Query: 367 EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              G+ P  V +NTL+ G  +     K+  +   + E N
Sbjct: 215 RGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 41/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  +F  +  +G  P+V T + ++  + ++G  +   +  +EM+        +C PD  
Sbjct: 141 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LC EG  +K+  L+ +M+     P +VTYN+V+  +C       A  L   M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V T+++++ +LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P+ V+Y  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EA+ L   +     
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIADVV-------------- 341
           + DI +YS LI+G CK GR K A E+   +      P G++ + ++              
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 342 ---------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                          T+N+++ +LC  GK+ +A +    M + G+ P+ V+F+ L+ G  
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 554

Query: 387 RNNETSKVVELLHRMDE 403
            + E  K   +   M +
Sbjct: 555 NSGEGLKAFSVFDEMTK 571



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 201/401 (50%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L  ++ +FG  PN +T++ LI+G    G+   AL +F  M+   G       P  V 
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAKG-----LTPSEVS 370

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++DGLCK    D A+   ++MK   +    +TY  +I G C     +EA  L  EM 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P++VT+S +++  CK G+ + A +++  + ++G+ PN  +Y+TL+   C  G + 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P  V+++ L 
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +   
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D   Y+ L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK   A   
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 363 FLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             + EA+G V P+ V +   + G  +  +    +    +MD
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +K+ G + +V TY+ LI+ LCR+        L  +M         +  P+ V 
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR------MIHPNEVT 300

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G   EG V  A +LL +M    ++P+ VT+N++I G     +  EA ++F  M 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++ V++D LCKN + + A      M + GV      Y  ++DG C  G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G   ++ +YS LING+CK    + A  +   +   G+ P  + Y+TL 
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  ++ A ++++ M   G   D + +   +  LCK G + EA E  R +      
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  S+ CLI+G   SG    A+ +F  + +        TY  ++  LC  G + +A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              + A   A D V +NTL+    ++   +K V L   M +R+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +++ L  K++  G  P ++TY+T+++  C+ G    A+ L + M +     GV    D  
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK----GV--DADVC 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC+   + K   LL  M+ + I+P+ VTYN++I GF        A +L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN VTF+ ++D     G  +EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+  ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI P +VTY+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +   
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ L+  LCK+G++  A E    +    ++ + V+++ +I+     G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNN---ETSKVVELLH 399
           +F +M   G  P    + +L+ G  +     E  K ++ LH
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 162/330 (49%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C  +  +Y  +I    +EG +  + E+   M     NP V T N+++     + +    
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                EM+ + + P+V TF+++++ LC  G  E++S L++ M + G  P    YNT++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYNTL  G     +V  A +L +EM   G++ +   +   IDG    G   EAL++F 
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +          SY  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +D+A  L  +M   G+ PD V ++ L+ G
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALING 447



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 191/433 (44%), Gaps = 42/433 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A ++F ++   G  P   TY +L+ GLC+ GH   A    + +        V    D 
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 613

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y T++  +CK G + KA  L  +M  ++I PD  TY S+I G C    +  A     E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +G V PN V ++  +D + K G+ +      E M  +G  P+    N ++DG+   G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI P  +T +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 300 KCELD-----------------------------------IRSYSCLIDGLCKSGRLKIA 324
              LD                                    R Y  LI+GLC+ G +K A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           + +   +    +    V  + M+ AL   GK D+A  L   M    + P   +F TLM  
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 385 CIRNNETSKVVEL 397
           C +N    + +EL
Sbjct: 974 CCKNGNVIEALEL 986



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 30/413 (7%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE----------------- 44
            +A +LF ++      P+  TY++LI+GLCR G T++A+   +E                 
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 45   ----MINGNGEFGVVCK---------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                   G  + G+  +         PD V    +IDG  + G ++K  +LL +M ++N 
Sbjct: 691  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             P++ TYN ++ G+    D + +  L+  ++  G+ P+ +T   ++  +C++  +E   +
Sbjct: 751  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            +L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++   
Sbjct: 811  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +N   + +  +  EM  +GI P    Y  L  GL  +  ++ AF + +EM  H +     
Sbjct: 871  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            A    +  L K G   EA  L R +  +K    I S++ L+   CK+G +  A EL   +
Sbjct: 931  AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                L  D+V+YN++I  LCA G M  A +L+ +M+  G   +   +  L+ G
Sbjct: 991  SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 46/440 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAV 61
           A  +  ++   G  PN I YSTLI   CR G    A+ ++E MI  G+         D  
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHF 509

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++  LCK G V +A+E +  M    I P+ V+++ +I G+  + +  +A  +F EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P   T+  ++  LCK G + EA + L+ +  +    +  +YNTL+   C +G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN----------KEIEG------------- 218
            +A  LF  M       + ++Y+ LI+G C+           KE E              
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689

Query: 219 -------------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                         +    +M + G  P +VT N +  G   + ++E+   L  EM    
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y   + G  K   +  +  L+R++ +     D  +   L+ G+C+S  L+I  
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 326 ELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  + + RGV + D  T+N++I   CA+G+++ A DL   M + G++ D    + ++  
Sbjct: 810 KILKAFICRGVEV-DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868

Query: 385 CIRNNETSKVVELLHRMDER 404
             RN+   +   +LH M ++
Sbjct: 869 LNRNHRFQESRMVLHEMSKQ 888



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 2/314 (0%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N NP V  Y+ +IR +       ++  +F  M   G  P+V T + I+  + K+G+    
Sbjct: 120 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
              L+ M++  + P+   +N L++  C  G   ++  L   ME  G    + +Y+ +++ 
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCK    + A+ L   M SKG+   V TYN L   L   +++ + + L  +M++  +  +
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y T I+G    G ++ A +L   +       +  +++ LIDG    G  K A ++F+
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    L    V+Y +++  LC + + D A   ++ M+  GV    + +  ++ G  +N 
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 390 ETSKVVELLHRMDE 403
              + V LL+ M +
Sbjct: 418 FLDEAVVLLNEMSK 431



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 117/241 (48%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N  VY+ L+  +   G +  + E+F  M   G   +V++ + ++    K+ E     S  
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EML + I P V T+N L   L      E++  L  +M++ G A     Y T +   CK 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G    A+EL   ++    + D+ +Y+ LI  LC+S R+   + L   + + ++  + VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I+    +GK+  A  L  +M + G++P+ V FN L+ G I      + +++ + M+ 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 404 R 404
           +
Sbjct: 362 K 362


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 179/341 (52%)

Query: 57  KPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKR 116
            P+A  +  ++  + + G +  A+ +  +M  + + P VVT+N+++ G C A+D N A  
Sbjct: 241 PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANA 300

Query: 117 LFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M   GV P+V T+   M  LCK G++++A ++ E M + GV PN  V+ TL+D  C
Sbjct: 301 LRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHC 360

Query: 177 LTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVV 236
             G V    EL   M + G K ++ +Y+ L NG C+ ++++ A  +  EM + G+KP  V
Sbjct: 361 KEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKV 420

Query: 237 TYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTL 296
           TY TL  G  +  +++ A ++  EM   GVA D   Y T I GL K+G  V++  +   +
Sbjct: 421 TYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEM 480

Query: 297 RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKM 356
                E D  +Y+ +ID  CK+  +K  ++L   +        VVTYN++++  C  G+M
Sbjct: 481 MEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQM 540

Query: 357 DKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
             A  L   M   GV PD + +N L+ G  ++ +     EL
Sbjct: 541 KNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 159/312 (50%), Gaps = 1/312 (0%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V +A    LQ+ D  + P+   +N ++R    +     A+ +F EM+ +GV P VVTF+ 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG 195
           +M  +CK   +  A+ L  LM + GV P+ + Y   M G C  GR+  A E+F  M   G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAF 255
              N   ++ LI+ +CK   +   L L+ EM ++GIK  +V YN L  GL  +  ++ A 
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGL 315
            + +EM+ +G+  D   Y T IDG CK G +  A+E+ + +      LD  +Y+ LI GL
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464

Query: 316 CKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDC 375
            KSGR   +  +   +    L  D  TY ++I A C +  +     L  +M+ KG  P  
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524

Query: 376 VAFNTLMLG-CI 386
           V +N +M G CI
Sbjct: 525 VTYNVVMNGFCI 536



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 194/390 (49%), Gaps = 9/390 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A + +L   G  P    ++ L+  + R+G    A N+F+EM+      GV   P  V
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEML----RRGV--PPTVV 280

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + T++ G+CK   ++ A  L   M    + PDV TY + ++G C A    +A  +F EM
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV PN V F+ ++D  CK G +    +L   M   G++ +   YN L +G C    +
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A ++   M + G K +  +Y+ LI+G+CK  E++ A+ +  EM  +G+    VTY TL
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  +   + ++  EM   G+  D   Y   ID  CKN  +    +L + ++    
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +  + +Y+ +++G C  G++K A  L +++    +  D +TYNI++   C  GK+  A +
Sbjct: 521 KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE 580

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNET 391
           L     AKG+  D   + +L+   ++   T
Sbjct: 581 L---KSAKGMVSDFGLYTSLINEFVKKKST 607



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 9/321 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A AL   +   G  P+V TY   + GLC+ G    A+ +FEEM     E GV   P+ V
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM----RERGV--NPNTV 350

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           ++TT+ID  CKEG V    EL  +M  + I  D+V YN++  G C   D   A  +  EM
Sbjct: 351 VFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+ VT++ ++D  CK G+++ A ++ + M   GV  +   Y TL+ G   +GR 
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             ++ +   M   G + +  +Y+++I+ +CKN +++    L  EM +KG KP VVTYN +
Sbjct: 471 VDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVV 530

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G   + Q++ A  L + M   GV  D   Y   +DG CK+G + +A EL     ++  
Sbjct: 531 MNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVS- 589

Query: 302 ELDIRSYSCLIDGLCKSGRLK 322
             D   Y+ LI+   K    K
Sbjct: 590 --DFGLYTSLINEFVKKKSTK 608



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 140/292 (47%)

Query: 113 EAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLM 172
           EA   +++++D GV P    F+++M ++ ++GK+  A  + + M++ GV P    +NTLM
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286

Query: 173 DGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C    +N A  L   M   G   +V++Y   + G CK   I+ A+ ++ EM  +G+ 
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346

Query: 233 PTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALEL 292
           P  V + TL     +   V    +L  EM   G+  D  AY    +GLC+   +  A ++
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406

Query: 293 FRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCA 352
              +R    + D  +Y+ LIDG CK G L +A E+   +    +  D VTY  +I  L  
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466

Query: 353 DGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            G+   +  +  +M   G+ PD   +  ++    +N++     +LL  M  +
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNK 518


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 202/377 (53%), Gaps = 17/377 (4%)

Query: 2   EAAALFTKLKAFGCE------PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVV 55
           ++  L   LK+F C       PNV+T++ LI+G C+ G   V ++L+EEM        VV
Sbjct: 175 KSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVV 234

Query: 56  CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAK 115
                  YT +IDG CK+G + +A  + L+M +  + P+ + Y ++I GF    DS+ A 
Sbjct: 235 ------TYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAM 288

Query: 116 RLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF 175
           +   +M++QG++ ++  + VI+  LC  GK++EA++++E M +  + P+  ++ T+M+ +
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAY 348

Query: 176 CLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
             +GR+  A  ++  +   G + +V + S +I+G  KN ++  A+S +        K   
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE-----KAND 403

Query: 236 VTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT 295
           V Y  L   L +        +LF ++   G+  D + Y ++I GLCK G +V+A +L   
Sbjct: 404 VMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTK 463

Query: 296 LRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGK 355
           +     ELD+ +Y+ LI GL   G +  A ++F  + R  +  D   ++++I A   +G 
Sbjct: 464 MVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGN 523

Query: 356 MDKAHDLFLDMEAKGVA 372
           M  A DL LDM+ +G+A
Sbjct: 524 MTTASDLLLDMQTRGLA 540



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 194/416 (46%), Gaps = 42/416 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  +   +  FGCEP+VI+Y++LI+G CR G    A  + E +      +G  CKPD V 
Sbjct: 75  AVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESL---RASYGFTCKPDIVS 131

Query: 63  YTTIIDGLCKEGFVD----------------------------KAKELLLQMKDKN---- 90
           + T+ +G  K   +D                            K+ EL L +K  N    
Sbjct: 132 FNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKR 191

Query: 91  --INPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEE 148
             + P+VVT+  +I G+C A D      L+ EM    +  NVVT++ ++D  CK G+M+ 
Sbjct: 192 DALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251

Query: 149 ASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILIN 208
           A  +   M++  V PN+ VY T+++GF   G  + A +    M + G + ++ +Y ++I+
Sbjct: 252 AGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G C   +++ A  +  +M    + P ++ + T+    F+  +++ A  ++ ++   G   
Sbjct: 312 GLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371

Query: 269 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELF 328
           D  A  T IDG+ KNG + EA+  F T +      +   Y+ LID LCK         LF
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAISYFCTEKA-----NDVMYTVLIDALCKEEDFIEVERLF 426

Query: 329 HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
             +    L+ D   Y   I  LC  G +  A  L   M  +G+  D  A+ TL+ G
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYG 482



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 194/390 (49%), Gaps = 11/390 (2%)

Query: 15  CEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEG 74
           C PNV+TYST I+  C++G   +AL  F  M   +  F     P+ V +T +IDG CK G
Sbjct: 159 CSPNVVTYSTWIDMFCKSGELKLALKSFNCM-KRDALF-----PNVVTFTCLIDGYCKAG 212

Query: 75  FVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFS 134
            ++    L  +M+   ++ +VVTY ++I GFC   +   A  +++ M++  V+PN + ++
Sbjct: 213 DLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYT 272

Query: 135 VIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESM 194
            I++   + G  + A + L  M+  G+R +   Y  ++ G C  G++  A E+   ME  
Sbjct: 273 TIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKG 332

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERA 254
               ++  ++ ++N Y K+  ++ A+++Y +++ +G +P VV  +T+  G+ +  Q+  A
Sbjct: 333 DLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDG 314
              F   + + V      Y   ID LCK    +E   LF  +       D   Y+  I G
Sbjct: 393 ISYFCTEKANDVM-----YTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447

Query: 315 LCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPD 374
           LCK G L  A++L   + +  L  D+  Y  +I+ L + G M +A  +F +M   GV PD
Sbjct: 448 LCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPD 507

Query: 375 CVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              F+ L+    +    +   +LL  M  R
Sbjct: 508 SAVFDLLIRAYEKEGNMTTASDLLLDMQTR 537



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 195/399 (48%), Gaps = 12/399 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA    ++L+     P+ +T +  I+ L  +    ++L     +++          P   
Sbjct: 4   EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRG------YAPHRS 57

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            + +++  +CK G V  A +++  M      PDV++YNS+I G C   D   A  L +E 
Sbjct: 58  SFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAC-LVLES 116

Query: 122 MDQGV----QPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +        +P++V+F+ + +   K   ++E    + +M++    PN   Y+T +D FC 
Sbjct: 117 LRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCK 175

Query: 178 TGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVT 237
           +G +  A + F  M+      NV +++ LI+GYCK  ++E  +SLY EM    +   VVT
Sbjct: 176 SGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVT 235

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           Y  L  G  +  +++RA  ++  M    V  ++  Y T I+G  + G    A++    + 
Sbjct: 236 YTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKML 295

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LDI +Y  +I GLC  G+LK A E+   + +G L+ D++ +  M++A    G+M 
Sbjct: 296 NQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMK 355

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVE 396
            A +++  +  +G  PD VA +T++ G  +N +  + + 
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIS 394



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 173/367 (47%), Gaps = 39/367 (10%)

Query: 76  VDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSV 135
           V +A + L +++  +  PD VT N  I     +N    + +    ++ +G  P+  +F+ 
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 136 IMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES-- 193
           ++  +CK G+++ A  ++  M + G  P+   YN+L+DG C  G +  A  +  S+ +  
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 194 -MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
              CK ++ S++ L NG+ K K ++    +Y  ++ K   P VVTY+T      +  +++
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDMFCKSGELK 180

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A K F+ M+R  +  +   +   IDG CK G +   + L+  +R ++  L++ +Y+ LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 313 DGLCKSGRLKIAWELF----------HSLPRGVLI------------------------- 337
           DG CK G ++ A  ++          +SL    +I                         
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
            D+  Y ++I  LC  GK+ +A ++  DME   + PD + F T+M    ++      V +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 398 LHRMDER 404
            H++ ER
Sbjct: 361 YHKLIER 367



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+++ ++T++N   ++G    A+N++ ++I    E      PD V  +T+IDG+ K G +
Sbjct: 336 PDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE------PDVVALSTMIDGIAKNGQL 389

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVI 136
            +A       K  +     V Y  +I   C   D  E +RLF ++ + G+ P+   ++  
Sbjct: 390 HEAISYFCTEKAND-----VMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSW 444

Query: 137 MDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGC 196
           +  LCK G + +A +L   M+Q G+  + F Y TL+ G    G +  A+++F  M   G 
Sbjct: 445 IAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGV 504

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTV 235
             +   + +LI  Y K   +  A  L  +M ++G+   V
Sbjct: 505 CPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAV 543



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +E   LF+K+   G  P+   Y++ I GLC+ G+ + A  L  +M+    E       D 
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLEL------DL 473

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             YTT+I GL  +G + +A+++  +M    + PD   ++ +IR +    +   A  L ++
Sbjct: 474 FAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLD 533

Query: 121 MMDQGVQPNV 130
           M  +G+   V
Sbjct: 534 MQTRGLARAV 543


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 202/388 (52%), Gaps = 8/388 (2%)

Query: 18  NVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVD 77
           +V+TY+ ++  LC  G    A NL+++MI G G       P  V Y  +I G CK+G +D
Sbjct: 430 SVVTYNIVLLWLCELGKVNEACNLWDKMI-GKG-----ITPSLVSYNHMILGHCKKGCMD 483

Query: 78  KAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIM 137
            A E++  + +  + P+ +TY  ++ G     D   A  +F +M+  G+ P   TF+ I+
Sbjct: 484 DAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSII 543

Query: 138 DELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCK 197
           + LCK G++ EA   L   I+    P +  YN ++DG+   G ++ A+ ++  M      
Sbjct: 544 NGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LING+CK+ +++ AL ++ +M  KG++  +  Y TL  G  ++  +E A K 
Sbjct: 604 PNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKF 663

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK 317
           F ++   G+  +T  Y   I        +  AL L + +   K   D++ Y+ LIDGL K
Sbjct: 664 FSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLK 723

Query: 318 SGRLKIAWELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
            G+L  A +L+   L RG+ + D+  YN++I+ LC  G+++ A  +  +M+   + P  +
Sbjct: 724 EGKLSFALDLYSEMLCRGI-VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVL 782

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            +NTL+ G  +     +   L   M ++
Sbjct: 783 LYNTLIAGHFKEGNLQEAFRLHDEMLDK 810



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 199/418 (47%), Gaps = 40/418 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA   F +    G + +  +YS +I  +CR       L+L  +++ G+ E G V  P  
Sbjct: 239 VEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD----LDLASKLVEGDEELGWV--PSE 292

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +I    + G   +A  L  +M D  +  +V    S+I+G+C   D N A RLF E
Sbjct: 293 GTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDE 352

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGF----- 175
           +++ GV PNV  FSV+++   K G +E+A++L   M  +G++P  F+ N L+ GF     
Sbjct: 353 VVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNL 412

Query: 176 -----------------------------CLTGRVNRAKELFVSMESMGCKHNVFSYSIL 206
                                        C  G+VN A  L+  M   G   ++ SY+ +
Sbjct: 413 LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK   ++ A  + + ++  G+KP  +TY  L  G F+    E AF +FD+M   G+
Sbjct: 473 ILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532

Query: 267 AADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWE 326
               + + + I+GLCK G + EA +   T           +Y+C+IDG  K G +  A  
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592

Query: 327 LFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  + R  +  +V+TY  +I+  C   KMD A  +  DM+ KG+  D   + TL+ G
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAG 650



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 199/383 (51%), Gaps = 6/383 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L+ K+   G  P++++Y+ +I G C+ G     ++   E++NG  E G+  KP+A+
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILGHCKKG----CMDDAHEVMNGIIESGL--KPNAI 502

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT +++G  K+G  + A  +  QM    I P   T+NS+I G C     +EA+      
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q   P  +T++ I+D   K G ++ A  +   M +  + PN   Y +L++GFC + ++
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A ++   M+  G + ++  Y+ LI G+CK +++E A   +S++L  G+ P  + YN +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                 ++ +E A  L  EM  + +  D   Y + IDGL K G +  AL+L+  +     
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI 742

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI  Y+ LI+GLC  G+L+ A ++   +    +   V+ YN +I     +G + +A  
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFR 802

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M  KG+ PD   ++ L+ G
Sbjct: 803 LHDEMLDKGLVPDDTTYDILVNG 825



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 201/407 (49%), Gaps = 13/407 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE---MINGNGEFGVVCKP 58
           +A  L+T++K  G +P V   + L+ G  +        NL E    +++G  E G+    
Sbjct: 380 KANELYTRMKCMGLQPTVFILNFLLKGFRKQ-------NLLENAYLLLDGAVENGIA--- 429

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
             V Y  ++  LC+ G V++A  L  +M  K I P +V+YN +I G C     ++A  + 
Sbjct: 430 SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVM 489

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +++ G++PN +T++++M+   K G  E A  + + M+  G+ P  + +N++++G C  
Sbjct: 490 NGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           GRV+ A++   +           +Y+ +I+GY K   I+ A S+Y EM    I P V+TY
Sbjct: 550 GRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITY 609

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +L  G  + ++++ A K+ D+M+R G+  D   Y T I G CK   +  A + F  L  
Sbjct: 610 TSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLE 669

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +    +   Y+ +I        ++ A  L   +    +  D+  Y  +I  L  +GK+  
Sbjct: 670 VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSF 729

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A DL+ +M  +G+ PD   +N L+ G   + +     ++L  MD  N
Sbjct: 730 ALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNN 776



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 7/398 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F  +   G  P V   + L+  + R      A  LF+EM      +G     D  
Sbjct: 170 EAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERR-IYG-----DCY 223

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
               ++    K G   +A+    Q   + +  D  +Y+ VI+  C  +D + A +L    
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+  T++ ++    + G   EA +L + M+   V  N  V  +L+ G+C+ G V
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N A  LF  +  +G   NV  +S+LI    K   +E A  LY+ M   G++PTV   N L
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  + + +E A+ L D    +G+A+    Y   +  LC+ G + EA  L+  +     
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENGIAS-VVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
              + SY+ +I G CK G +  A E+ + +    L  + +TY I++      G  + A +
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN 522

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           +F  M A G+ P    FN+++ G  +    S+  + L+
Sbjct: 523 MFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 3/327 (0%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D+ ++  ++    +   + +A E    M +  + P V   N ++      N   +A RLF
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM ++ +  +  T  V+M    K GK  EA +        G++ +A  Y+ ++   C  
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
             ++ A +L    E +G   +  +Y+ +I    +      AL L  EM+   +   V   
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
            +L  G      V  A +LFDE+   GV  +   +   I+   K G + +A EL+  ++ 
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFH-SLPRGVLIADVVTYNIMIHALCADGKMD 357
           +  +  +   + L+ G  K   L+ A+ L   ++  G  IA VVTYNI++  LC  GK++
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG--IASVVTYNIVLLWLCELGKVN 448

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           +A +L+  M  KG+ P  V++N ++LG
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILG 475


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 195/400 (48%), Gaps = 18/400 (4%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
            A  L  ++  +GC P+V+ YSTLING    GH   AL+L   M+         CKP+ V
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---------CKPNTV 293

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y   + GLC     +   EL+ +M  K  +P+  T++ +I   C  N  + A  +  +M
Sbjct: 294 CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM 353

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+ V +++I++ L + G++++A +LL  M+    +P+A  +N ++ GFC   R 
Sbjct: 354 EKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERW 410

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A EL   M    C     +++ILI+  C+N  +  A  ++ +M      P +VTY++L
Sbjct: 411 HDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +    C
Sbjct: 471 LNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDC 527

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +++ LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK 587

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           L   M  K   PD +++N+ + G  R        EL+  M
Sbjct: 588 LLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEM 624



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           L  ++   GC PN  T+S LI+ LC+      A+ + E+M     ++G  C+PD V Y  
Sbjct: 314 LMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM----EKYG--CEPDTVNYNI 367

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           II+ L + G VD A  LL  M  K   PD + +N+V++GFC A   ++A  L  +M    
Sbjct: 368 IINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDD 424

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
                +TF++++D LC+NG +  A+Q+ E M +    P+   Y++L++GF   G V  A 
Sbjct: 425 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 484

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +LF    SM CK ++FSY+ ++ G C+    E A  L +EM+ K   P  VT+N L   L
Sbjct: 485 QLF---RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 541

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   V+RA ++ ++M  +G   D + Y   I+G  + G + +AL+L  T   + C+ D 
Sbjct: 542 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLST---MSCKPDA 598

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHAL 350
            SY+  + GLC++ R + A EL   + R     + VT+    H L
Sbjct: 599 ISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 643



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 194/382 (50%), Gaps = 16/382 (4%)

Query: 20  ITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           ++++TL+ G CR G    A    E ++      G     + V YT +IDG C+ G +D A
Sbjct: 125 VSHNTLVAGYCRDGRLADA----ERVLGAARATGAA---NVVTYTALIDGYCRSGRLDDA 177

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
             L+  M    + PD  TYN+V++G C A    EA+ L  EM+     PN VTF+  +  
Sbjct: 178 LRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRS 234

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHN 199
            C+NG ++ A QLL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N
Sbjct: 235 FCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPN 291

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFD 259
              Y+  + G C  +  E    L +EM+ KG  P   T++ L   L + + V+ A ++ +
Sbjct: 292 TVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLE 351

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSG 319
           +M+++G   DT  Y   I+ L + G + +AL L  +   + C+ D   ++ ++ G C++ 
Sbjct: 352 QMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNS---MVCKPDALGFNAVLKGFCRAE 408

Query: 320 RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFN 379
           R   A EL   + R       +T+NI+I  LC +G ++ A  +F  M      PD V ++
Sbjct: 409 RWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYS 468

Query: 380 TLMLGCIRNNETSKVVELLHRM 401
           +L+ G          ++L   M
Sbjct: 469 SLLNGFSEQGLVEVAIQLFRSM 490



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 130/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A+ L  ++    C    +T++ LI+ LC+ G    A  +FE+M          C PD V
Sbjct: 412 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR------YRCTPDIV 465

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y+++++G  ++G V+ A +L   M  K   PD+ +YN+V++G C A    +A  L  EM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN VTF+++++ LC+ G ++ A ++LE M   G  P+ F YN L++GF   GR+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P  VT+
Sbjct: 583 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 141/273 (51%), Gaps = 8/273 (2%)

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           ++ ++++ +LC   ++ +A ++L+ +       +A  +NTL+ G+C  GR+  A+ +  +
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
             + G   NV +Y+ LI+GYC++  ++ AL L + M    + P   TYNT+  GL    +
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
            E A +L  EM R+    +   + T I   C+NG +  A++L   +    C  D+  YS 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LI+G  + G +  A +L +++   +   + V YN  +  LC   + +   +L  +M  KG
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            +P+   F+ L+    +NN     VE+L +M++
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 41/437 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           ++  +F  +  +G  P+V T + ++  + ++G  +   +  +EM+        +C PD  
Sbjct: 141 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 194

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  +I+ LC EG  +K+  L+ +M+     P +VTYN+V+  +C       A  L   M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V T+++++ +LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P+ V+Y  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EA+ L   +     
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSL------PRGVLIADVV-------------- 341
           + DI +YS LI+G CK GR K A E+   +      P G++ + ++              
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 342 ---------------TYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCI 386
                          T+N+++ +LC  GK+ +A +    M + G+ P+ V+F+ L+ G  
Sbjct: 495 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 554

Query: 387 RNNETSKVVELLHRMDE 403
            + E  K   +   M +
Sbjct: 555 NSGEGLKAFSVFDEMTK 571



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 201/401 (50%), Gaps = 7/401 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A+ L  ++ +FG  PN +T++ LI+G    G+   AL +F  M+   G       P  V 
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY-MMEAKG-----LTPSEVS 370

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  ++DGLCK    D A+   ++MK   +    +TY  +I G C     +EA  L  EM 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P++VT+S +++  CK G+ + A +++  + ++G+ PN  +Y+TL+   C  G + 
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P  V+++ L 
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +   
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
           +D   Y+ L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK   A   
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670

Query: 363 FLDMEAKG-VAPDCVAFNTLMLGCIRNNETSKVVELLHRMD 402
             + EA+G V P+ V +   + G  +  +    +    +MD
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 6/403 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   +K+ G + +V TY+ LI+ LCR+        L  +M         +  P+ V 
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR------MIHPNEVT 300

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y T+I+G   EG V  A +LL +M    ++P+ VT+N++I G     +  EA ++F  M 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++ V++D LCKN + + A      M + GV      Y  ++DG C  G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
            A  L   M   G   ++ +YS LING+CK    + A  +   +   G+ P  + Y+TL 
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +  ++ A ++++ M   G   D + +   +  LCK G + EA E  R +      
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            +  S+ CLI+G   SG    A+ +F  + +        TY  ++  LC  G + +A   
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
              + A   A D V +NTL+    ++   +K V L   M +R+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 9/401 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +++ L  K++  G  P ++TY+T+++  C+ G    A+ L + M +     GV    D  
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK----GV--DADVC 264

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +I  LC+   + K   LL  M+ + I+P+ VTYN++I GF        A +L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN VTF+ ++D     G  +EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+  ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI P +VTY+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +   
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D  +++ L+  LCK+G++  A E    +    ++ + V+++ +I+     G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRN---NETSKVVELLH 399
           +F +M   G  P    + +L+ G  +     E  K ++ LH
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 162/330 (49%)

Query: 55  VCKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEA 114
           +C  +  +Y  +I    +EG +  + E+   M     NP V T N+++     + +    
Sbjct: 118 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 115 KRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDG 174
                EM+ + + P+V TF+++++ LC  G  E++S L++ M + G  P    YNT++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 175 FCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
           +C  GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 235 VVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFR 294
            VTYNTL  G     +V  A +L +EM   G++ +   +   IDG    G   EAL++F 
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 295 TLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADG 354
            +          SY  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 355 KMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
            +D+A  L  +M   G+ PD V ++ L+ G
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALING 447



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 191/433 (44%), Gaps = 42/433 (9%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           ++A ++F ++   G  P   TY +L+ GLC+ GH   A    + +        V    D 
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 613

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y T++  +CK G + KA  L  +M  ++I PD  TY S+I G C    +  A     E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673

Query: 121 MMDQG-VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +G V PN V ++  +D + K G+ +      E M  +G  P+    N ++DG+   G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI P  +T +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 300 KCELD-----------------------------------IRSYSCLIDGLCKSGRLKIA 324
              LD                                    R Y  LI+GLC+ G +K A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 325 WELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           + +   +    +    V  + M+ AL   GK D+A  L   M    + P   +F TLM  
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 385 CIRNNETSKVVEL 397
           C +N    + +EL
Sbjct: 974 CCKNGNVIEALEL 986



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 30/413 (7%)

Query: 2    EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE----------------- 44
            +A +LF ++      P+  TY++LI+GLCR G T++A+   +E                 
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 45   ----MINGNGEFGVVCK---------PDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNI 91
                   G  + G+  +         PD V    +IDG  + G ++K  +LL +M ++N 
Sbjct: 691  VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750

Query: 92   NPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQ 151
             P++ TYN ++ G+    D + +  L+  ++  G+ P+ +T   ++  +C++  +E   +
Sbjct: 751  GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 810

Query: 152  LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYC 211
            +L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++   
Sbjct: 811  ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 870

Query: 212  KNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +N   + +  +  EM  +GI P    Y  L  GL  +  ++ AF + +EM  H +     
Sbjct: 871  RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930

Query: 272  AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSL 331
            A    +  L K G   EA  L R +  +K    I S++ L+   CK+G +  A EL   +
Sbjct: 931  AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990

Query: 332  PRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
                L  D+V+YN++I  LCA G M  A +L+ +M+  G   +   +  L+ G
Sbjct: 991  SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 196/440 (44%), Gaps = 46/440 (10%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMI-NGNGEFGVVCKPDAV 61
           A  +  ++   G  PN I YSTLI   CR G    A+ ++E MI  G+         D  
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHF 509

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++  LCK G V +A+E +  M    I P+ V+++ +I G+  + +  +A  +F EM
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P   T+  ++  LCK G + EA + L+ +  +    +  +YNTL+   C +G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKN----------KEIEG------------- 218
            +A  LF  M       + ++Y+ LI+G C+           KE E              
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689

Query: 219 -------------ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                         +    +M + G  P +VT N +  G   + ++E+   L  EM    
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
              +   Y   + G  K   +  +  L+R++ +     D  +   L+ G+C+S  L+I  
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 326 ELFHS-LPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLG 384
           ++  + + RGV + D  T+N++I   CA+G+++ A DL   M + G++ D    + ++  
Sbjct: 810 KILKAFICRGVEV-DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868

Query: 385 CIRNNETSKVVELLHRMDER 404
             RN+   +   +LH M ++
Sbjct: 869 LNRNHRFQESRMVLHEMSKQ 888



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 2/314 (0%)

Query: 90  NINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEA 149
           N NP V  Y+ +IR +       ++  +F  M   G  P+V T + I+  + K+G+    
Sbjct: 120 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 177

Query: 150 SQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILING 209
              L+ M++  + P+   +N L++  C  G   ++  L   ME  G    + +Y+ +++ 
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCK    + A+ L   M SKG+   V TYN L   L   +++ + + L  +M++  +  +
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297

Query: 270 TWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH 329
              Y T I+G    G ++ A +L   +       +  +++ LIDG    G  K A ++F+
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNN 389
            +    L    V+Y +++  LC + + D A   ++ M+  GV    + +  ++ G  +N 
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 390 ETSKVVELLHRMDE 403
              + V LL+ M +
Sbjct: 418 FLDEAVVLLNEMSK 431



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 117/241 (48%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N  VY+ L+  +   G +  + E+F  M   G   +V++ + ++    K+ E     S  
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 224 SEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EML + I P V T+N L   L      E++  L  +M++ G A     Y T +   CK 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 284 GYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY 343
           G    A+EL   ++    + D+ +Y+ LI  LC+S R+   + L   + + ++  + VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 344 NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           N +I+    +GK+  A  L  +M + G++P+ V FN L+ G I      + +++ + M+ 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 404 R 404
           +
Sbjct: 362 K 362


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 204/398 (51%), Gaps = 6/398 (1%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  L   ++  G  PNV T + +++ LC++     A  +FE+M         VC PD + 
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK------VCTPDEIT 449

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           + ++IDGL K G VD A ++  +M D +   + + Y S+I+ F       +  +++ +M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMV 509

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +Q   P++   +  MD + K G+ E+   + E +      P+A  Y+ L+ G    G  N
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFAN 569

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
              ELF SM+  GC  +  +Y+I+I+G+CK  ++  A  L  EM +KG +PTVVTY ++ 
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
            GL +I +++ A+ LF+E +   +  +   Y + IDG  K G I EA  +   L      
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            ++ +++ L+D L K+  +  A   F S+       + VTY I+I+ LC   K +KA   
Sbjct: 690 PNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749

Query: 363 FLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 400
           + +M+ +G+ P  +++ T++ G  +    ++   L  R
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA A+F ++    C P+ IT+ +LI+GL + G    A  ++E+M++ +      C+ +++
Sbjct: 430 EACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD------CRTNSI 483

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +YT++I      G  +   ++   M ++N +PD+   N+ +     A +  + + +F E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+  ++S+++  L K G   E  +L   M + G   +   YN ++DGFC  G+V
Sbjct: 544 KSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A +L   M++ G +  V +Y  +I+G  K   ++ A  L+ E  SK I+  VV Y++L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ +++ A+ + +E+ + G+  + + + + +D L K   I EAL  F++++ LKC
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKC 723

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             +  +Y  LI+GLCK  +   A+  +  + +  +    ++Y  MI  L   G + +A  
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
           LF   +A G  PD   +N ++ G    N       L      R
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 6/320 (1%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYT 64
           A+F ++K+    P+  +YS LI+GL + G       LF  M     E G  C  D   Y 
Sbjct: 538 AMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM----KEQG--CVLDTRAYN 591

Query: 65  TIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQ 124
            +IDG CK G V+KA +LL +MK K   P VVTY SVI G    +  +EA  LF E   +
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651

Query: 125 GVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            ++ NVV +S ++D   K G+++EA  +LE ++Q G+ PN + +N+L+D       +N A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEA 711

Query: 185 KELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIG 244
              F SM+ + C  N  +Y ILING CK ++   A   + EM  +G+KP+ ++Y T+  G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD 304
           L +   +  A  LFD  + +G   D+  Y   I+GL      ++A  LF   R     + 
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIH 831

Query: 305 IRSYSCLIDGLCKSGRLKIA 324
            ++   L+D L K+  L+ A
Sbjct: 832 NKTCVVLLDTLHKNDCLEQA 851



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 212/443 (47%), Gaps = 65/443 (14%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM---------------INGNG 50
           LF +++  G EP V  ++TLI G  + G    AL+L +EM               I+  G
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249

Query: 51  EFGVV--------------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVV 96
           + G V               KPD V YT++I  LCK   +D+A E+   ++     P   
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
            YN++I G+  A   +EA  L      +G  P+V+ ++ I+  L K GK++EA ++ E M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            +    PN   YN L+D  C  G+++ A EL  SM+  G   NV + +I+++  CK++++
Sbjct: 370 KKDAA-PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ-------------- 262
           + A +++ +M  K   P  +T+ +L  GL ++ +V+ A+K++++M               
Sbjct: 429 DEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL 488

Query: 263 -----RHG----------------VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
                 HG                 + D     T++D + K G   +   +F  ++  + 
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             D RSYS LI GL K+G     +ELF+S+     + D   YNI+I   C  GK++KA+ 
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 362 LFLDMEAKGVAPDCVAFNTLMLG 384
           L  +M+ KG  P  V + +++ G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDG 631



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 198/402 (49%), Gaps = 7/402 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA +L  + +A G  P+VI Y+ ++  L + G    AL +FEEM            P+  
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-------PNLS 378

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  +ID LC+ G +D A EL   M+   + P+V T N ++   C +   +EA  +F +M
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+ +TF  ++D L K G++++A ++ E M+    R N+ VY +L+  F   GR 
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
               +++  M +  C  ++   +  ++   K  E E   +++ E+ S+   P   +Y+ L
Sbjct: 499 EDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSIL 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             GL +       ++LF  M+  G   DT AY   IDG CK G + +A +L   ++    
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           E  + +Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A+ 
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
           +  ++  KG+ P+   +N+L+   ++  E ++ +     M E
Sbjct: 679 ILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 720



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 192/395 (48%), Gaps = 7/395 (1%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           ++ F   P    Y+TLI       H+ + L LF++M     E G   +P   ++TT+I G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM----QELGY--EPTVHLFTTLIRG 212

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
             KEG VD A  LL +MK  +++ D+V YN  I  F      + A + F E+   G++P+
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 189
            VT++ ++  LCK  +++EA ++ E + +    P  + YNT++ G+   G+ + A  L  
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIH 249
              + G   +V +Y+ ++    K  +++ AL ++ EM  K   P + TYN L   L    
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAG 391

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYS 309
           +++ AF+L D MQ+ G+  +       +D LCK+  + EA  +F  +    C  D  ++ 
Sbjct: 392 KLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFC 451

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            LIDGL K GR+  A++++  +       + + Y  +I      G+ +  H ++ DM  +
Sbjct: 452 SLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQ 511

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
             +PD    NT M    +  E  K   +   +  R
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSR 546



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 174/370 (47%), Gaps = 6/370 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  ++ K+    C  N I Y++LI      G       ++++M+N N      C PD  
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN------CSPDLQ 518

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +  T +D + K G  +K + +  ++K +   PD  +Y+ +I G   A  +NE   LF  M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG   +   +++++D  CK GK+ +A QLLE M   G  P    Y +++DG     R+
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A  LF   +S   + NV  YS LI+G+ K   I+ A  +  E++ KG+ P V T+N+L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSL 698

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
              L +  ++  A   F  M+      +   Y   I+GLCK     +A   ++ ++    
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
           +    SY+ +I GL K+G +  A  LF        + D   YN MI  L    +   A  
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818

Query: 362 LFLDMEAKGV 371
           LF +   +G+
Sbjct: 819 LFEETRRRGL 828



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 72  KEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVV 131
           +EGF     +++  M+     P    Y ++I  F   N S+    LF +M + G +P V 
Sbjct: 150 REGF-----DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
            F+ ++    K G+++ A  LL+ M    +  +  +YN  +D F   G+V+ A + F  +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
           E+ G K +  +Y+ +I   CK   ++ A+ ++  +      P    YNT+ +G     + 
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCL 311
           + A+ L +  +  G      AY   +  L K G + EAL +F  ++      ++ +Y+ L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNIL 383

Query: 312 IDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
           ID LC++G+L  A+EL  S+ +  L  +V T NIM+  LC   K+D+A  +F  M+ K  
Sbjct: 384 IDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            PD + F +L+ G  +        ++  +M
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 6/296 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           E   LF  +K  GC  +   Y+ +I+G C+ G    A  L EEM     E      P  V
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE------PTVV 623

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y ++IDGL K   +D+A  L  + K K I  +VV Y+S+I GF      +EA  +  E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV T++ ++D L K  ++ EA    + M ++   PN   Y  L++G C   + 
Sbjct: 684 MQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           N+A   +  M+  G K +  SY+ +I+G  K   I  A +L+    + G  P    YN +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
             GL   ++   AF LF+E +R G+          +D L KN  + +A  +   LR
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 7/289 (2%)

Query: 97  TYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELM 156
           +YNS++       + +   ++  EM   G  P+V T   ++    K  K+ E   +++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            +   RP    Y TL+  F      +    LF  M+ +G +  V  ++ LI G+ K   +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 217 EGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + ALSL  EM S  +   +V YN       ++ +V+ A+K F E++ +G+  D   Y + 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 277 IDGLCKNGYIVEALELFRTL---RILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPR 333
           I  LCK   + EA+E+F  L   R + C     +Y+ +I G   +G+   A+ L      
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTY---AYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 334 GVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLM 382
              I  V+ YN ++  L   GK+D+A  +F +M+ K  AP+   +N L+
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILI 384


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 219/448 (48%), Gaps = 48/448 (10%)

Query: 5   ALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNG-EFGVVCKP----- 58
           +L+  L   G  P+V T + L+  LC  G   +A  +F+ M   N   FG++ +      
Sbjct: 136 SLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEFSFGILARGYCRAG 195

Query: 59  ---DA------------VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIR 103
              DA            V+  T++ G C+EG VD+A+ L+ +M+D+ + P+VVT+N+ I 
Sbjct: 196 RSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARIS 255

Query: 104 GFCYANDSNEAKRLFIEMMDQG----VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQI 159
             C A    +A R+F +M ++      +P+ VTF V++   C+ G ++EA  L+++M   
Sbjct: 256 ALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCG 315

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G       YN  + G    G V  A+EL   M   G + N ++Y+I+++G CK  +    
Sbjct: 316 GFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDV 375

Query: 220 LSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             +   + S  + P VVTY +L            A ++ DEM + G A +++ Y   +  
Sbjct: 376 RKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQS 435

Query: 280 LCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFH------SLPR 333
           L K G I EA  L   +      LD  S + +IDGLC++ +L +A ++        SL  
Sbjct: 436 LWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLAL 495

Query: 334 GVL-----------------IADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCV 376
           G L                 + D +TY+ ++ ALC +G+ D+A    L+M  K ++PD V
Sbjct: 496 GRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSV 555

Query: 377 AFNTLMLGCIRNNETSKVVELLHRMDER 404
            ++T + G  ++ +TS  V++L  M+++
Sbjct: 556 LYDTFIHGYCKHGKTSLAVKVLRDMEKK 583



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 184/423 (43%), Gaps = 25/423 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  +++  G  PNV+T++  I+ LC+ G  + A  +F +M     E G+  +PD V
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDM-QEKWERGLP-RPDQV 287

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  ++ G C+ G VD+A+ L+  M+       V +YN  + G        EA+ L  EM
Sbjct: 288 TFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREM 347

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GVQPN  T+++I+D LCK GK  +  ++ + +    + P+   Y +L+  +C  G  
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNA 407

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
             A  +   M   GC  N F+Y++L+    K   I  A  L   M  KG      + N +
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNII 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
             GL   ++++ A  + D M   G  A                       D   Y T + 
Sbjct: 468 IDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVS 527

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIA 338
            LCK G   EA +    +       D   Y   I G CK G+  +A ++   + +     
Sbjct: 528 ALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKP 587

Query: 339 DVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELL 398
              TYN++I         D+   L  +M+ KG+ P+ + +N+L+         +K + LL
Sbjct: 588 STRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLL 647

Query: 399 HRM 401
             M
Sbjct: 648 DEM 650



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 175/385 (45%), Gaps = 30/385 (7%)

Query: 17  PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKEGFV 76
           P+V+TY++L++  C  G+   A  + +EM          C P++  Y  ++  L K G +
Sbjct: 389 PDVVTYTSLLHAYCSEGNAAAANRILDEMAQKG------CAPNSFTYNVLLQSLWKAGRI 442

Query: 77  DKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQ--------- 127
            +A+ LL +M +K  + D  + N +I G C  N  + A  +   M ++G           
Sbjct: 443 TEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSF 502

Query: 128 --------------PNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMD 173
                         P+ +T+S ++  LCK G+ +EA + L  MI   + P++ +Y+T + 
Sbjct: 503 LSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIH 562

Query: 174 GFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C  G+ + A ++   ME  GCK +  +Y++LI G+ +    +  L L SEM  KGI P
Sbjct: 563 GYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICP 622

Query: 234 TVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELF 293
            V+TYN+L     E   V +A  L DEM ++ +  +  ++   I   CK      A  +F
Sbjct: 623 NVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF 682

Query: 294 RTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCAD 353
               +  C      YS +   L   GR   A  +  ++    +      Y  +I  LC  
Sbjct: 683 DA-SLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKV 741

Query: 354 GKMDKAHDLFLDMEAKGVAPDCVAF 378
            ++D  H L   +  KG + D  AF
Sbjct: 742 DEVDHGHRLLKLLMVKGYSFDPAAF 766



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 159/352 (45%), Gaps = 29/352 (8%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  ++   G +PN  TY+ +++GLC+ G       + + + +G      V  PD V
Sbjct: 339 EAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSG------VMTPDVV 392

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+++   C EG    A  +L +M  K   P+  TYN +++    A    EA+RL   M
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVR------------------- 162
            ++G   +  + ++I+D LC+N K++ A  +++ M   G                     
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512

Query: 163 ----PNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P+   Y+TL+   C  GR + AK+  + M       +   Y   I+GYCK+ +   
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL 572

Query: 219 ALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+ +  +M  KG KP+  TYN L  G  E H  +   KL  EM+  G+  +   Y + I 
Sbjct: 573 AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIK 632

Query: 279 GLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHS 330
             C+ G + +A+ L   +   +   +I S+  LI   CK+     A  +F +
Sbjct: 633 SFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA 684



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 12/347 (3%)

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           +Y  ++    +E   D  + L   +      PDV T N +++  C A     A+R+F  M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++    N  +F ++    C+ G+  +A  +L+ M  +    N  V NT++ GFC  G+V
Sbjct: 177 PER----NEFSFGILARGYCRAGRSMDALGVLDSMPTM----NLVVCNTVVAGFCREGQV 228

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---GI-KPTVVT 237
           + A+ L   M   G   NV +++  I+  CK   +  A  ++++M  K   G+ +P  VT
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR 297
           ++ +  G  E   V+ A  L D M+  G      +Y  ++ GL +NG + EA EL R + 
Sbjct: 289 FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMA 348

Query: 298 ILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +  +Y+ ++DGLCK G+     ++   +  GV+  DVVTY  ++HA C++G   
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAA 408

Query: 358 KAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
            A+ +  +M  KG AP+   +N L+    +    ++   LL RM E+
Sbjct: 409 AANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEK 455



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 160/336 (47%), Gaps = 18/336 (5%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGN----GEFGVV-- 55
           EA  L  ++   G   +  + + +I+GLCR     +A+++ + M N      G  G    
Sbjct: 444 EAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFL 503

Query: 56  -----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG 104
                      C PD + Y+T++  LCKEG  D+AK+ LL+M  K+I+PD V Y++ I G
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563

Query: 105 FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPN 164
           +C    ++ A ++  +M  +G +P+  T+++++    +    +E  +L+  M   G+ PN
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623

Query: 165 AFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN+L+  FC  G VN+A  L   M       N+ S+ +LI  +CK  +   A  ++ 
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683

Query: 225 EMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             LS   +  V+ Y+ +   L    +   A  + + +    ++   + Y+  I+GLCK  
Sbjct: 684 ASLSTCGQKEVL-YSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVD 742

Query: 285 YIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR 320
            +     L + L +     D  ++  +ID L + G+
Sbjct: 743 EVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGK 778



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 28/194 (14%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMING------------- 48
           E   L +++K  G  PNV+TY++LI   C  G    A+ L +EM+               
Sbjct: 607 EILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLI 666

Query: 49  -----NGEFGVV----------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINP 93
                  +F             C    V+Y+ +   L   G   +A  +L  + +  I+ 
Sbjct: 667 KAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISI 726

Query: 94  DVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL 153
               Y  +I G C  ++ +   RL   +M +G   +   F  ++D L + GK +    L 
Sbjct: 727 HRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLS 786

Query: 154 ELMIQIGVRPNAFV 167
           + M+++  R N   
Sbjct: 787 QKMMEMAERDNGLA 800


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 193/396 (48%), Gaps = 11/396 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  ++  G  PNV TY+ L+  LC+      A  + +EM          C PD V Y T
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG------CPPDDVTYAT 199

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+  LCK   +D+A E+L  M      P   +YN+++   C      E   +  +M+ +G
Sbjct: 200 IVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +QPNV+T++ I+D  CK G++  A  +L  M+  G  PN   +  L+ G    GRV+ A 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++  M + G   +  SY+ILI G C   +++GA S+ + M   G  P V TY+TL  G 
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +  A  ++++M R G   +   Y   +D  CK     +A  L   + +  C  + 
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 434

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ LI  LC   R+  A  +FH + R   + +  TYN +IH L  +G    A  +  +
Sbjct: 435 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 494

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M++ G+    V +NT++ G  +   + + +  + +M
Sbjct: 495 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 530



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 182/388 (46%), Gaps = 8/388 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           E  ++ + +   G +PNVITY+T+++  C+ G   +A  +   M I G       C P+ 
Sbjct: 242 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG-------CTPNV 294

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +T ++ GL  +G V  A ++   M  +   P  V+YN +IRG C   D   A  +   
Sbjct: 295 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 354

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNV T+S ++D   K G +  A  +   M + G +PN  VY  ++D FC    
Sbjct: 355 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 414

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            N+AK L   M    C  N  +++ LI   C  + +  AL ++ EM   G  P   TYN 
Sbjct: 415 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 474

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF       A  +  EMQ HG+      Y T + GLC+     EA+     + +  
Sbjct: 475 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 534

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +  ++S +I   CK G +++A  +  ++       +++ Y I++  LC   K+  A 
Sbjct: 535 IQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAM 594

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
              L M  +G+ P+ V +N L+ G  RN
Sbjct: 595 TYLLKMLYEGIYPNTVTWNVLVRGVFRN 622



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 5/331 (1%)

Query: 71  CKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNV 130
           C E  V     +   M+   ++P+V TYN ++R  C  N    A+++  EM  +G  P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 131 VTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 190
           VT++ I+  LCK  +++EA+++L  M      P A  YN ++   C   R+     +   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQ 250
           M   G + NV +Y+ +++ +CK  E+  A ++ + M+  G  P VVT+  L  GLF+  +
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSC 310
           V  A  ++  M   G A  T +Y   I GLC  G +  A  +  ++    C  ++R+YS 
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 311 LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKG 370
           LIDG  K+G L  A  +++ + R     +VV Y  M+   C     ++A  L   M  + 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 371 VAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             P+ V FNTL+          + + + H M
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 460



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T++++ G E +++TY+T+++GLC+T  +  A+    +MI          +P+A 
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG------IQPNAF 540

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ II   CKEG V  A  +L  M   N + +++ Y  ++   C  +   +A    ++M
Sbjct: 541 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKM 600

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + +G+ PN VT++V++  + +N    E S  ++
Sbjct: 601 LYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQ 633


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 190/350 (54%), Gaps = 7/350 (2%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G E +++ Y+ L+N L R      A+  F E +  +G F      D+  +  +I GLC+ 
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF------DSCSFNILIRGLCRI 250

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG-VQPNVVT 132
           G VDKA EL  +M+    +PDV+TYN++I GFC  N+ +    L  E++ +  + P+VVT
Sbjct: 251 GKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVT 310

Query: 133 FSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 192
           ++ I+   CK GKME+AS L   MI  G++PNAF +N L++GF   G +  A+ ++  M 
Sbjct: 311 YTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEML 370

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVE 252
            +GC  ++ +++ LI+G+C+  ++E +L L+ E+ ++ + P   T+  L   L + +++ 
Sbjct: 371 LLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLH 430

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLI 312
            A     +++   + A  + Y   IDG CK G + EA  +   +   +C+ D  +Y+ LI
Sbjct: 431 EARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILI 490

Query: 313 DGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDL 362
            G C  GRL  A  +F+ +       D +T   +I  L   G  ++A+ +
Sbjct: 491 IGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRI 540



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 26/365 (7%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  LF +++ FGC P+VITY+TLING CR        +L +E+++ N        PD V
Sbjct: 255 KAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKND-----LSPDVV 309

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            YT+II G CK G ++KA  L   M    I P+  T+N +I GF    D   A+ ++ EM
Sbjct: 310 TYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEM 369

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+++TF+ ++D  C+ GK+E + +L   +    + PN + +  L +  C   R+
Sbjct: 370 LLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRL 429

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTL 241
           + A+     ++        F Y+ +I+G+CK   ++ A  + +EM  K  KP  +TY  L
Sbjct: 430 HEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTIL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRT------ 295
            IG     ++  A  +F+ M   G A D+    + I  L K G   EA  + +       
Sbjct: 490 IIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFN 549

Query: 296 --LRILKCELDIRS-------YSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIM 346
             L+ LK  + +R+       +   +DGL         +    S+P          YNI+
Sbjct: 550 LGLKSLKRNVPLRTNTDIPVAFMSTVDGLTNH------FPGLASMPLATCNEGQSLYNIL 603

Query: 347 IHALC 351
           +   C
Sbjct: 604 LDKYC 608



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V+Y  +++ L +   VD+A     +    +   D  ++N +IRG C     ++A  LF E
Sbjct: 203 VVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNE 262

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M   G  P+V+T++ +++  C+  +++    LL EL+ +  + P+   Y +++ G+C  G
Sbjct: 263 MRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG 322

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++ +A  LF +M S G K N F+++ILING+ K  ++  A ++Y EML  G  P ++T+ 
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
           +L  G     +VER+ KL+ E+    ++ + + +    + LCK   + EA    R L+  
Sbjct: 383 SLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWR 442

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                   Y+ +IDG CK+G +  A  +   +       D +TY I+I   C  G++ +A
Sbjct: 443 HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEA 502

Query: 360 HDLFLDMEAKGVAPDCVAFNTL---MLGCIRNNETSKVVEL 397
             +F  M   G APD +   +L   +L     NE  +++++
Sbjct: 503 ISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQI 543



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 14/383 (3%)

Query: 21  TYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDAVIYTTIIDGLCKEGFVDKA 79
           TYS L+  L   G    A  +++ M I+G+        PDA +   ++      G  + A
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHS-------PDASVLGFLVSSATDAGKFNIA 191

Query: 80  KELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDE 139
           +  +       +   +V YN ++      N  +EA   F E M      +  +F++++  
Sbjct: 192 RTWV-----DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRG 246

Query: 140 LCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG-CKH 198
           LC+ GK+++A +L   M   G  P+   YNTL++GFC    V+R  +L   + S      
Sbjct: 247 LCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSP 306

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           +V +Y+ +I+GYCK  ++E A  L++ M+S GIKP   T+N L  G  ++  +  A  ++
Sbjct: 307 DVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMY 366

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKS 318
           +EM   G   D   + + IDG C+ G +  +L+L+  L       +  +++ L + LCK 
Sbjct: 367 EEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKE 426

Query: 319 GRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAF 378
            RL  A      L    ++A    YN +I   C  G +D+A+ +  +ME K   PD + +
Sbjct: 427 NRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITY 486

Query: 379 NTLMLGCIRNNETSKVVELLHRM 401
             L++G       S+ + + +RM
Sbjct: 487 TILIIGHCMKGRLSEAISIFNRM 509



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y+ ++  L + GF + AK +   M     +PD     + + GF  ++ ++  K       
Sbjct: 140 YSFLLRSLSEMGFHESAKAVYDCMNIDGHSPD-----ASVLGFLVSSATDAGKFNIARTW 194

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+ ++V ++ ++++L +  +++EA       + +    ++  +N L+ G C  G+V+
Sbjct: 195 VDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVD 254

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPTVVTYNTL 241
           +A ELF  M   GC  +V +Y+ LING+C+  E++    L  E+LSK  + P VVTY ++
Sbjct: 255 KAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSI 314

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKC 301
             G  ++ ++E+A  LF+ M   G+  + + +   I+G  K G +V A  ++  + +L C
Sbjct: 315 ISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGC 374

Query: 302 ELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHD 361
             DI +++ LIDG C++G+++ + +L+H L    L  +  T+ I+ +ALC + ++ +A  
Sbjct: 375 PPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARG 434

Query: 362 LFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDER 404
              D++ + +      +N ++ G  +     +   +L  M+E+
Sbjct: 435 FLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK 477



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 139/276 (50%), Gaps = 8/276 (2%)

Query: 132 TFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 191
           T+S ++  L + G  E A  + + M   G  P+A V   L+      G+ N A+      
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVD-- 196

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQV 251
              G + ++  Y+ L+N   +  +++ A+  + E +         ++N L  GL  I +V
Sbjct: 197 ---GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKV 253

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL--DIRSYS 309
           ++AF+LF+EM+  G + D   Y T I+G C+   +    +L + L + K +L  D+ +Y+
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL-LSKNDLSPDVVTYT 312

Query: 310 CLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAK 369
            +I G CK G+++ A  LF+++    +  +  T+NI+I+     G M  A +++ +M   
Sbjct: 313 SIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLL 372

Query: 370 GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           G  PD + F +L+ G  R  +  + ++L H ++ RN
Sbjct: 373 GCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN 408



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 6/184 (3%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           + A  ++ ++   GC P++IT+++LI+G CRTG    +L L+ E+   N        P+ 
Sbjct: 360 VSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN------LSPNE 413

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             +  + + LCKE  + +A+  L  +K ++I      YN VI GFC A + +EA  +  E
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAE 473

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++  +P+ +T+++++   C  G++ EA  +   M+  G  P++    +L+      G 
Sbjct: 474 MEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGM 533

Query: 181 VNRA 184
            N A
Sbjct: 534 PNEA 537


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 201/385 (52%), Gaps = 7/385 (1%)

Query: 1   MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +EA +++  +   G  P++ TY +L+ GLC+ GH + A      ++         C  D 
Sbjct: 472 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK------ACAIDE 525

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
               T++ G+CK G +D+A +L  +M  +NI PD  TY  ++ GFC       A  L   
Sbjct: 526 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQM 585

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+++G+ P+ + ++ +++ L   G+++ AS +  E++ + G+  +   YN++M+G+   G
Sbjct: 586 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 645

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           ++N  + L  +M       +  SY+IL++GY K  ++   L LY +M+ +GIKP  VTY 
Sbjct: 646 QINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYR 705

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
            L  GL E   +E A K  ++M   GV  D  A+   I    +   +  AL+LF  ++ L
Sbjct: 706 LLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWL 765

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                 ++Y  +++GL +   L+ ++E+ H +    L      Y  +I+A C  G +D A
Sbjct: 766 HMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGA 825

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLG 384
            +L  DM+A GV P  VA ++++ G
Sbjct: 826 FELKEDMKALGVVPSEVAESSIVRG 850



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 213/424 (50%), Gaps = 34/424 (8%)

Query: 2   EAAALFTKLKAFGCE-PNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDA 60
           +A ++  K+K   C  PN +TY+T++N   + G    AL + ++M   NG      + D 
Sbjct: 248 KAESMLQKMK--NCRLPNAVTYNTILNWYVKKGRCKSALRILDDM-EKNG-----IEADL 299

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
             Y  +ID LCK     +A  LL +M++ N+ PD  +YN++I GF      N A  +F +
Sbjct: 300 YTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQ 359

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEE--------------------ASQLLELMIQIG 160
           M+ Q ++P+V T++ ++D  C+NG+ +E                    A Q+L+ M+  G
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADG 419

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+   Y+ L++     G +  A++    M  M    +V S++ +I+ YC+   +  A 
Sbjct: 420 IDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 475

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           S+Y  M+  G  P + TY +L  GL +   + +A +    +     A D     T + G+
Sbjct: 476 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 535

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADV 340
           CK+G + EAL+L   +       D  +Y+ L+DG CK G++  A  L   +    L+ D 
Sbjct: 536 CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDT 595

Query: 341 VTYNIMIHALCADGKMDKAHDLFLDMEAK-GVAPDCVAFNTLMLGCIRNNETSKVVELLH 399
           + Y  +++ L  +G++  A  +F ++  K G+  DC+A+N++M G ++  + +++  L+ 
Sbjct: 596 IAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMR 655

Query: 400 RMDE 403
            M E
Sbjct: 656 NMHE 659



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 192/368 (52%), Gaps = 5/368 (1%)

Query: 14  GCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDGLCKE 73
           G  P+ I Y+ L+NGL   G    A  +F+E+I   G +      D + Y ++++G  K 
Sbjct: 590 GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA-----DCIAYNSMMNGYLKG 644

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G +++ + L+  M +  + P   +YN ++ G+      +    L+ +M+ +G++P+ VT+
Sbjct: 645 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 704

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
            +++  LC+ G +E A + LE M+  GV P+   ++ L+  F    +++ A +LF  M+ 
Sbjct: 705 RLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKW 764

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
           +    +  +Y  ++NG  +   ++ +  +  +M+  G++P    Y  L      +  ++ 
Sbjct: 765 LHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDG 824

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLID 313
           AF+L ++M+  GV     A  + + GLCK G + EA+ +F ++        I +++ L+ 
Sbjct: 825 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 884

Query: 314 GLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAP 373
           GLCK  ++  A+ L   +    L  DVVTYN++I  LC    +  A DL+ +M++KG+ P
Sbjct: 885 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 944

Query: 374 DCVAFNTL 381
           +   + TL
Sbjct: 945 NITTYITL 952



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 199/414 (48%), Gaps = 19/414 (4%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALN-LFEEMINGNGEFGVV------ 55
           A  +F ++     +P+V TY+ LI+G CR G T  A   L+E  I G     V       
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 56  -------CKPDAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYA 108
                    PD + Y+ +I+    EG + +A++    M    I+ DV ++N +I  +C  
Sbjct: 413 KCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 468

Query: 109 NDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVY 168
            +  EA  ++  M+  G  P++ T+  ++  LC+ G + +A + +  +++     +    
Sbjct: 469 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 528

Query: 169 NTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           NTL+ G C  G ++ A +L   M +     + ++Y+IL++G+CK  ++  AL L   ML 
Sbjct: 529 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 588

Query: 229 KGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIV 287
           KG+ P  + Y  L  GL    QV+ A  +F E+  + G+ AD  AY + ++G  K G I 
Sbjct: 589 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 648

Query: 288 EALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMI 347
           E   L R +   +      SY+ L+ G  K G+L     L+  + +  +  D VTY ++I
Sbjct: 649 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 708

Query: 348 HALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
             LC  G ++ A      M  +GV PD +AF+ L+      ++ S  ++L   M
Sbjct: 709 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 762



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 7/384 (1%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  L  K+      P+  TY+ L++G C+ G  + AL L + M+    E G+V  PD +
Sbjct: 543 EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML----EKGLV--PDTI 596

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKN-INPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
            YT +++GL  EG V  A  +  ++  K  +  D + YNS++ G+      NE +RL   
Sbjct: 597 AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 656

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +  V P+  +++++M    K G++     L   M++ G++P+   Y  L+ G C  G 
Sbjct: 657 MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 716

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
           +  A +    M   G   +  ++ ILI  + +  ++  AL L+S M    + P+  TY  
Sbjct: 717 IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVA 776

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  GL   + +++++++  +M   G+      Y   I+  C+ G I  A EL   ++ L 
Sbjct: 777 MVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALG 836

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
                 + S ++ GLCK G+++ A  +F S+ R  ++  + T+  ++H LC + K+D A 
Sbjct: 837 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 896

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLG 384
            L   ME+ G+  D V +N L+ G
Sbjct: 897 HLKQLMESCGLKVDVVTYNVLITG 920



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 11/403 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +   + A G +P+VITYS LIN     G    A    + M      F      D  
Sbjct: 407 KAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISF------DVA 456

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            +  IID  C+ G V +A  +   M      PD+ TY S++RG C      +AK   + +
Sbjct: 457 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 516

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++    +  T + ++  +CK+G ++EA  L E M+   + P+ + Y  L+DGFC  G+V
Sbjct: 517 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 576

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPTVVTYNT 240
             A  L   M   G   +  +Y+ L+NG     +++ A  ++ E++ K G+    + YN+
Sbjct: 577 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 636

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           +  G  +  Q+    +L   M  + V   + +Y   + G  K G +   L L+R +    
Sbjct: 637 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 696

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + D  +Y  LI GLC+ G ++IA +    +    +  D + ++I+I A     KM  A 
Sbjct: 697 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNAL 756

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 403
            LF  M+   ++P    +  ++ G IR N   +  E+LH M E
Sbjct: 757 QLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVE 799



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 20/347 (5%)

Query: 59  DAVIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLF 118
           D      +++ LC +G + KA+ +L +MK+  + P+ VTYN+++  +        A R+ 
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 119 IEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G++ ++ T+++++D+LCK  +   A  LL+ M ++ + P+   YNTL+ GF   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 179 GRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTY 238
           G++N A  +F  M     K +V +Y+ LI+GYC+N   + A  +  EM   G++P     
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP----- 402

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRI 298
                      +V +A ++   M   G+  D   Y   I+     G I EA +  + +  
Sbjct: 403 ----------REVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSR 448

Query: 299 LKCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +K   D+ S++C+ID  C+ G +  A+ ++ ++ R     D+ TY  ++  LC  G + +
Sbjct: 449 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 508

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           A +  + +  K  A D    NTL++G  ++    + ++L  +M  RN
Sbjct: 509 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 3   AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVI 62
           A  LF+ +K     P+  TY  ++NGL R      +  +  +M+    E G+  +P    
Sbjct: 755 ALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMV----ESGL--QPKHTH 808

Query: 63  YTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMM 122
           Y  +I+  C+ G +D A EL   MK   + P  V  +S++RG C      EA  +F  +M
Sbjct: 809 YIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 868

Query: 123 DQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P + TF+ +M  LCK  K+++A  L +LM   G++ +   YN L+ G C    + 
Sbjct: 869 RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCIC 928

Query: 183 RAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPT 234
            A +L+  M+S G   N+ +Y  L         ++    L  ++  +GI P+
Sbjct: 929 DALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 36/258 (13%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFS--------------------- 202
           N F  + L++ +   G+V  A      M+  G K ++FS                     
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 203 --------------YSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
                          +I++N  C   ++  A S+  +M +  + P  VTYNT+     + 
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            + + A ++ D+M+++G+ AD + Y   ID LCK      A  L + +R +    D  SY
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           + LI G    G++ +A  +F+ + R  L   V TY  +I   C +G+ D+A  +  +M+ 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 369 KGVAPDCVAFNTLMLGCI 386
            GV P  V+    +L C+
Sbjct: 398 TGVRPREVSKAKQILKCM 415



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLF 258
           N+FS  +L+N Y K  ++  A +    M   G K ++ + N +   L  I++ E  +   
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL-DIRSYSCLIDGLCK 317
            E        D       ++ LC  G + +A  + + ++   C L +  +Y+ +++   K
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILNWYVK 276

Query: 318 SGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVA 377
            GR K A  +   + +  + AD+ TYNIMI  LC   +  +A+ L   M    + PD  +
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 378 FNTLMLGCIRNNETSKVVELLHRM 401
           +NTL+ G     + +  + + ++M
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQM 360


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 10/395 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA   F +     C P++ +++ +I   C   +   A      M +     G+   PD  
Sbjct: 62  EAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRS----LGI--PPDVT 115

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            Y  ++ G C  G V +A     +M  K   P+V TYN+VI G C     + A  LF  +
Sbjct: 116 AYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRL 174

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+  T+S ++  LC+  ++E A ++ ++M++     +A  YN + DGFC   RV
Sbjct: 175 PHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRV 234

Query: 182 NRAKELFVSMESMGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPTVVTYNT 240
           + A E+  +M    CK +V +Y+ +ING C+ K  IE A  L+ +M+     P  VTY T
Sbjct: 235 DEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGT 294

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           + +GL +I++V+R  +LF  M + G++ D +AY + I    K   + EA  + +      
Sbjct: 295 MILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH 354

Query: 301 CELDIRSYSCLIDGLCKSGRLKI--AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              D+  Y+ LI G C++ + ++  A  LF ++    +  +V+TYNI++  LC  G+ D+
Sbjct: 355 VGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDE 414

Query: 359 AHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSK 393
           A+ +F +M     +P+ + F  + +G I   +T K
Sbjct: 415 AYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDK 449



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 184/364 (50%), Gaps = 10/364 (2%)

Query: 10  LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIIDG 69
           +++ G  P+V  Y+ ++ G C  G    AL  F       G+ G  CKP+   Y T+I+G
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATYNTVING 157

Query: 70  LCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPN 129
           LCK G +D A  L  ++    ++PD  TY++++ G C A     A +++  M++     +
Sbjct: 158 LCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGD 217

Query: 130 VVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFC-LTGRVNRAKELF 188
              ++ + D  CK  +++EA ++L+ MIQ   +P+   YN +++G C    R+  A  LF
Sbjct: 218 AGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLF 277

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M    C  N  +Y  +I G  K  E++  L L+  M   G+ P    Y++L     ++
Sbjct: 278 QQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKV 337

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC--KNGYIVEALELFRTLRILKCELDIR 306
            +++ A  +  +  R+ V  D + Y T I G C  +   + EAL LF+ ++  +   ++ 
Sbjct: 338 RKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVI 397

Query: 307 SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM 366
           +Y+ ++ GLCK+GR   A+++F  + +     + +T+ +M   +    K DK   +F+DM
Sbjct: 398 TYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457

Query: 367 EAKG 370
             KG
Sbjct: 458 VYKG 461



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 6/316 (1%)

Query: 87  KDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKM 146
           K +    DV  Y  ++     A  + EA R F   +    +P++ +F++I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 147 EEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMG--CKHNVFSYS 204
             A + L  M  +G+ P+   YN ++ G+C  GRV RA    +    MG  CK NV +Y+
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA---LIKFGKMGKTCKPNVATYN 152

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING CK  +I+ A+ L++ +    + P   TY+TL  GL +  ++E A K++D M   
Sbjct: 153 TVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEA 212

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCK-SGRLKI 323
               D  AY    DG CK   + EALE+ +T+   +C+  + +Y+C+I+G+C+   R++ 
Sbjct: 213 NYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEE 272

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
           A+ LF  +       + VTY  MI  L    ++ +  +LF  M   G++PD  A+++L+ 
Sbjct: 273 AYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIY 332

Query: 384 GCIRNNETSKVVELLH 399
             ++  +  +   +L 
Sbjct: 333 AFVKVRKLDEAKSILQ 348



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 8/226 (3%)

Query: 184 AKELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLF 242
           A++ F  S +  G +H+V+ Y+ L++   + +    A+  +   L    +P++ ++  + 
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCE 302
                +    RA++    M+  G+  D  AY   + G C  G +  AL  F  +    C+
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCK 145

Query: 303 LDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMD---KA 359
            ++ +Y+ +I+GLCK G++  A  LF  LP  ++  D  TY+ ++H LC   +++   K 
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 360 HDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERN 405
           +D+ L+    G   D  A+N +  G  +     + +E+L  M +R 
Sbjct: 206 YDMMLEANYDG---DAGAYNAMADGFCKERRVDEALEVLKTMIQRR 248


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 47/438 (10%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  L  +++  GC+P V+TY+ L+N LC  G+ + A  LF+EM+       V  + + +
Sbjct: 263 DAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVK------VGIEANTI 316

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRG----------------- 104
            +  ++DG  K G +D+A     +MK + + PD  T+N +  G                 
Sbjct: 317 TFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQEL 376

Query: 105 -------------------FCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGK 145
                               C+    ++A +L    ++QGV  +V  F+ ++    K G 
Sbjct: 377 HEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGF 436

Query: 146 MEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVF--SY 203
            E+A ++  +M +IG+ P++  +N L+ G C  GR++ A+ L   +E M CK      S+
Sbjct: 437 DEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLL---LEHMICKGYCVGTSF 493

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I ++ Y ++  +EGAL  + +M+  G++P  + ++    GL  +  V  A++ F EM  
Sbjct: 494 TIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTG 553

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKI 323
            G   +   Y + I   C+ GY+ EAL+L + +R      D+ + + LIDG CK GRL +
Sbjct: 554 RGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDM 613

Query: 324 AWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLML 383
             + F  +    L  DVVTYN +I+A C    M  A      M A G  PD   +N  M 
Sbjct: 614 MNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMH 673

Query: 384 GCIRNNETSKVVELLHRM 401
               N+  ++ V++L  +
Sbjct: 674 SLCNNHLLNRAVKMLDEL 691



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 188/398 (47%), Gaps = 25/398 (6%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  +++ +   G  P+  T++ LI GLC  G    A  L E MI         CK   V
Sbjct: 439 QALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMI---------CKGYCV 489

Query: 62  --IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFI 119
              +T  +D   + G V+ A +    M    + PD + +++ I G C  +  NEA + F+
Sbjct: 490 GTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFV 549

Query: 120 EMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G  PN +T++ ++   C+ G + EA +L + M Q G+ P+ F  N L+DGFC  G
Sbjct: 550 EMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEG 609

Query: 180 RVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYN 239
           R++   + F+ M + G   +V +Y+ +IN YC  +++  A+   ++ML+ G +P + TYN
Sbjct: 610 RLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYN 669

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRIL 299
                L   H + RA K+ DE+   G   ++  Y T +DG+C +  +  A+ L   L  +
Sbjct: 670 IWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSD-VLDRAMILTGKLIKM 728

Query: 300 KCELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +  + +      CK G  K A      L    +  D  T NI+      D    + 
Sbjct: 729 AFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL------DWAYKEM 782

Query: 360 HDLFLDMEAKGVAPD-CVAFNTLML---GCIRNNETSK 393
            D   D +A     D C+    LML     +RN+ +SK
Sbjct: 783 ED---DSQASNADIDRCLFLEFLMLMTYKAMRNSRSSK 817



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 197/438 (44%), Gaps = 43/438 (9%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           EA  +   ++  G  P++   + L+  L R G    A  +F EM    G      +P   
Sbjct: 158 EALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM-TARGP-----RPSLA 211

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
           I+  +I G C  G V     LL  M   N+ PD  +YN +I+G+     + +A +L  EM
Sbjct: 212 IFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEM 271

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G QP VVT++++++ LC +G M +A +L + M+++G+  N   +N L+DG+   GR+
Sbjct: 272 RESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRM 331

Query: 182 NRAKELFVSMESMGCKHNVFSYSILING-------------------------------- 209
           + A      M++ G   +  +++IL  G                                
Sbjct: 332 DEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDM 391

Query: 210 ----YCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                C +  ++ A  L    + +G+  +V  +N L     +    E+A +++  M + G
Sbjct: 392 VVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIG 451

Query: 266 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGRLKIAW 325
           +   +  +   I GLC  G + +A  L   + I K      S++  +D   +SG ++ A 
Sbjct: 452 LVPSSPTFNYLIMGLCNQGRLDDAQLLLEHM-ICKGYCVGTSFTIYMDSYFRSGNVEGAL 510

Query: 326 ELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGC 385
           + +  + +  +  D + ++  I  LC    +++A+  F++M  +G  P+ + +N+L+   
Sbjct: 511 KCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAF 570

Query: 386 IRNNETSKVVELLHRMDE 403
            R    S+ ++L  +M +
Sbjct: 571 CRVGYVSEALKLEKKMRQ 588



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 154/330 (46%), Gaps = 3/330 (0%)

Query: 74  GFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTF 133
           G   +A  +L  ++     P +    +++R    A +   A ++F+EM  +G +P++  F
Sbjct: 154 GMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIF 213

Query: 134 SVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 193
           + ++   C  G +     LL +M +  V P+A  YN L+ G+ + G+   A +L   M  
Sbjct: 214 NAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRE 273

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVER 253
            GC+  V +Y+IL+N  C +  +  A  L+ EM+  GI+   +T+N L  G  +  +++ 
Sbjct: 274 SGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDE 333

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLR-ILKCELDIRSYSCLI 312
           A+    EM+  G+  D   +     G  K G  V+     + L  +    +   S   ++
Sbjct: 334 AYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVV 393

Query: 313 DGLCKSGRLKIAWELF-HSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGV 371
             LC  GRL  AW+L   ++ +GV ++ V  +N ++ A   +G  ++A +++  M   G+
Sbjct: 394 CRLCWDGRLDDAWKLVCSAIEQGVPVS-VAGFNALVAAYSKEGFDEQALEVYSVMNKIGL 452

Query: 372 APDCVAFNTLMLGCIRNNETSKVVELLHRM 401
            P    FN L++G            LL  M
Sbjct: 453 VPSSPTFNYLIMGLCNQGRLDDAQLLLEHM 482



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 5/306 (1%)

Query: 101 VIRGFCYANDSNEAKRLFIEMMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIG 160
            +  F  A  ++EA  +   +   G  P++   + ++  L + G++  A ++   M   G
Sbjct: 146 ALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARG 205

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            RP+  ++N ++ GFC  G V+    L   M       +  SY+ILI GY    +   A 
Sbjct: 206 PRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAF 265

Query: 221 SLYSEMLSKGIKPTVVTYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM   G +PTVVTYN L   L     +  A +LFDEM + G+ A+T  +   +DG 
Sbjct: 266 QLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGY 325

Query: 281 CKNGYIVEALELFRTLRILKCELDIRSYSCLIDGLCKSGR---LKIAWELFHSLPRGVLI 337
            K G + EA    R ++      D  +++ L  G  K G+   L    +  H +    + 
Sbjct: 326 AKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRIS 385

Query: 338 ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVEL 397
           AD V  ++++  LC DG++D A  L      +GV      FN L+    +     + +E+
Sbjct: 386 ADSV--DMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEV 443

Query: 398 LHRMDE 403
              M++
Sbjct: 444 YSVMNK 449


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 193/396 (48%), Gaps = 11/396 (2%)

Query: 6   LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTT 65
           ++  ++  G  PNV TY+ L+  LC+      A  + +EM          C PD V Y T
Sbjct: 150 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG------CPPDDVTYAT 203

Query: 66  IIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQG 125
           I+  LCK   +D+A E+L  M      P   +YN+++   C      E   +  +M+ +G
Sbjct: 204 IVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 258

Query: 126 VQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 185
           +QPNV+T++ I+D  CK G++  A  +L  M+  G  PN   +  L+ G    GRV+ A 
Sbjct: 259 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 318

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGL 245
           +++  M + G   +  SY+ILI G C   +++GA S+ + M   G  P V TY+TL  G 
Sbjct: 319 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 378

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDI 305
            +   +  A  ++++M R G   +   Y   +D  CK     +A  L   + +  C  + 
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438

Query: 306 RSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLD 365
            +++ LI  LC   R+  A  +FH + R   + +  TYN +IH L  +G    A  +  +
Sbjct: 439 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 498

Query: 366 MEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           M++ G+    V +NT++ G  +   + + +  + +M
Sbjct: 499 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKM 534



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 182/388 (46%), Gaps = 8/388 (2%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-INGNGEFGVVCKPDA 60
           E  ++ + +   G +PNVITY+T+++  C+ G   +A  +   M I G       C P+ 
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG-------CTPNV 298

Query: 61  VIYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIE 120
           V +T ++ GL  +G V  A ++   M  +   P  V+YN +IRG C   D   A  +   
Sbjct: 299 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 358

Query: 121 MMDQGVQPNVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNV T+S ++D   K G +  A  +   M + G +PN  VY  ++D FC    
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 418

Query: 181 VNRAKELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNT 240
            N+AK L   M    C  N  +++ LI   C  + +  AL ++ EM   G  P   TYN 
Sbjct: 419 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 478

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK 300
           L  GLF       A  +  EMQ HG+      Y T + GLC+     EA+     + +  
Sbjct: 479 LIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 538

Query: 301 CELDIRSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAH 360
            + +  ++S +I   CK G +++A  +  ++       +++ Y I++  LC   K+  A 
Sbjct: 539 IQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAM 598

Query: 361 DLFLDMEAKGVAPDCVAFNTLMLGCIRN 388
              L M  +G+ P+ V +N L+ G  RN
Sbjct: 599 TYLLKMLYEGIYPNTVTWNVLVRGVFRN 626



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 182/393 (46%), Gaps = 10/393 (2%)

Query: 9   KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAVIYTTIID 68
           +L+   C    +  +  +    R G    AL  F   ++   + G     +  +Y  +ID
Sbjct: 82  RLRGVPCTEGALVAA--VGAFARAGAPDRALKTFYRAVH---DLGCARPTEPRLYNHLID 136

Query: 69  GLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEMMDQGVQP 128
            L +E  V     +   M+   ++P+V TYN ++R  C  N    A+++  EM  +G  P
Sbjct: 137 ALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPP 196

Query: 129 NVVTFSVIMDELCKNGKMEEASQLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELF 188
           + VT++ I+  LCK  +++EA+++L  M      P A  YN ++   C   R+     + 
Sbjct: 197 DDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVV 251

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPTVVTYNTLFIGLFEI 248
             M   G + NV +Y+ +++ +CK  E+  A ++ + M+  G  P VVT+  L  GLF+ 
Sbjct: 252 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 311

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIRSY 308
            +V  A  ++  M   G A  T +Y   I GLC  G +  A  +  ++    C  ++R+Y
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371

Query: 309 SCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEA 368
           S LIDG  K+G L  A  +++ + R     +VV Y  M+   C     ++A  L   M  
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431

Query: 369 KGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM 401
           +   P+ V FNTL+          + + + H M
Sbjct: 432 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 464



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 2   EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFGVVCKPDAV 61
           +A  + T++++ G E +++TY+T+++GLC+T  +  A+    +MI          +P+A 
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG------IQPNAF 544

Query: 62  IYTTIIDGLCKEGFVDKAKELLLQMKDKNINPDVVTYNSVIRGFCYANDSNEAKRLFIEM 121
            ++ II   CKEG V  A  +L  M   N + +++ Y  ++   C  +   +A    ++M
Sbjct: 545 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKM 604

Query: 122 MDQGVQPNVVTFSVIMDELCKNGKMEEASQLLE 154
           + +G+ PN VT++V++  + +N    E S  ++
Sbjct: 605 LYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQ 637


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.140    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,986,598,704
Number of Sequences: 23463169
Number of extensions: 240836348
Number of successful extensions: 976796
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9148
Number of HSP's successfully gapped in prelim test: 3896
Number of HSP's that attempted gapping in prelim test: 685012
Number of HSP's gapped (non-prelim): 92781
length of query: 405
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 260
effective length of database: 8,957,035,862
effective search space: 2328829324120
effective search space used: 2328829324120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)